Rmu_sc0002416.1_g000001

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002416.1
OG0000679
Physical Location & Seq
Forward (+)
3289 .. 7722
4434 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002416.1_g000001.1.cds

Sequence Viewer

Length: 2712 bp
atgaatgatcaatctcaggatttgagtacggtgaaacttctgagtgaaaaaaccaaggagattgctgacgtggcgtatggttacgccgttaaaggccgtgtagcttctctgacggcgctgctcatcgtcgccgccgagaaggttaacgattccgtcttggagttgcgtgattccgaatcggggaccaaggagaaggtgactatctacgaatggcttataagggaggctttgtccctgggcggccgtacagcgtcgctgttgagggcggccaaacgcgcctccacggctacggagggcgaaaactcggagaggaggaagctcgtgcttcgagagatagaactgcttcagctcttcggagctgtagctcagagcagcggtggtggggacaagaaggtgacttcgccactcatccgtgcagctcagggaggagacgaagcagttattcagctgcttttgaagacaaatatagatgtcaatgatgctgatgcagatggaaattctgctcttcattggatccttaaattgtccagattgttgtgtccccaacagatcaaaattttattgcttcttattgatcatggtgcccgagtaagccaaaggaatagattggggttaacagcatttcatattgctgccggtaatggtaattcagaggcacttgaggtccttctgttggaagacccagttggcgtccaatataggacggaaatgaaagaaacccccctgtttttcgctgtgaagaatgagagtaaggagtgtgctgagcttcttttgacgtggggagcaaatagtgaagtccttaacctgcggcaaagagctatagacctggcaacctctcaagatatgcgttacatattgctgaacccaaccactgttagcctcattaatcacgctttccccaatcaacataaatgtacggctttagagttgacagatgaagacaccgctaatgaaagaaatgttaactcaagcaccaaggcagaggtttgtaagtactttgactcgcatcgaggatgtgtcagaggagctaagtgcttttatgcacattgtgaggaggagtctcagaaagtgaaggagggagcagaccggagtcatttttctgctgctaaactactcaaacacaaaatctttgttggtggacttcctccttcagtggattctgatgatttgggaaagttctgtgaagaggagtttggatcagtggacgatgctatagtcattgtaactcaaatagaaaacaagatacaatctcgaggctttggttttgtcacatttagagaggagaaatctgcttcagaagctatgcaagcgcactacatcaccatgagaggcaagaaagttgaaataaaaggtttaattccaaaattggttttgggagctgagtttgagaagatgtcacctcaacaacgacaacaagataagaatattcaaaatcagcttccacagcagaagtcgaacgagaatattatggaaggtgataaccctgaacaaggttcttgggctgatagattagtccttggacaaccagtggcgtgttccactgaacctcaagttaccaagagctctgaggatccaagcactcctacatggctaaaggttttcaagaagtggtttcctgggttcttacaaggtctgtcaaagcattcaaattatgctctgtcttctctaaaagctgacttcagggctaaatttgggttagaactggatcactcatctgtgggctactctaagctcagtgactttgtgaaatgtttctctgatttatgtactgttgagattctccccatctgcaaacgtggaactccaactcacgtgatcctccggccaaaattttctaggcctcaacgccgactccttcctacactgagaacacctcacactctgtctctgtctgcacagcttgtcaaaggcggtgatacaaagtgtcttttggacctctcaagtggcgattgtggtgattcaaagtgtcttcaggaccattcgaagtgttttcaggacctttcagttaacaatggcagtgactcaaagtgttttcagaaccttacaattgaaagcattagtgatacaaagtgtcttcaggacctttcagctgacaatgctgctgattcaaagtgccttcaggacctttcatttgactttggtggtgattcaaactgtattgaggacctttccatttgcaatgctggtgagaagtttggctcaagtgtcactagccatgggcaagagaaaccctcctctgggtatcctgaaatgaactctgcagaggataaagtacaatgtgtgcacctgaggttcattcaattcttaaaaccagatcctctattctatggtcagaaagaaactgacgtgcttgccggagagactgacaatgaaaagggacagtgcagtgcgggggataaaggaagtataaatattagggatccaagacggcatctcgttttggagtccctgtccaagaaatggagcaaatcctacttccttcgtgaatttgatttctacaagatttacaaggaaagattatcggtaagaaggtgttttgcatgcaaccagcagaagatgctatgggccaatttcccttgtaaacacttgctgtggtgcactgactgtaagttgcgggcaatagaggcttctggtcttttcccacacaaatgcgtgctgtgtgacacagaagtacagaaaatggatttagtacttccatttactagtaactga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

903

Amino Acids

100.35

Weight (kDa)

6.5

Isoelectric Point (pI)

44.87

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 218
Acc36I ACCTGC 1 cut(s) 813
AccB1I GGYRCC 1 cut(s) 581
AccB7I CCANNNNNTGG 1 cut(s) 2460
AccII CGCG 1 cut(s) 276
AciI CCGC 9 cut(s) 132, 240, 266, 375, 808, 945, 1911, 2390, 2614
AcoI YGGCCR 3 cut(s) 241, 267, 1823
AcsI RAATTY 5 cut(s) 496, 555, 1688, 1829, 2486
AcuI CTGAAG 7 cut(s) 329, 1134, 1278, 1663, 1955, 2060, 2102
AcvI CACGTG 1 cut(s) 1813
AcyI GRCGYC 1 cut(s) 690
AdeI CACNNNGTG 1 cut(s) 1049
AfaI GTAC 8 cut(s) 28, 247, 916, 995, 1768, 2274, 2673, 2691
AfiI CCNNNNNNNGG 6 cut(s) 180, 673, 1490, 2237, 2238, 2460
AhlI ACTAGT 1 cut(s) 2702
AjiI CACGTC 3 cut(s) 70, 777, 2347
AjnI CCWGG 3 cut(s) 234, 825, 1615
AjuI GAANNNNNNNTTGG 4 cut(s) 669, 701, 1176, 1208
Alw21I GWGCWC 3 cut(s) 1565, 2286, 2600
Alw26I GTCTC 4 cut(s) 423, 1065, 1890, 2354
Alw44I GTGCAC 2 cut(s) 2282, 2596
Ama87I CYCGRG 2 cut(s) 585, 1251
AoxI GGCC 6 cut(s) 94, 241, 267, 1823, 1838, 2565
ApaLI GTGCAC 2 cut(s) 2282, 2596
ApeKI GCWGC 7 cut(s) 118, 372, 416, 448, 632, 1103, 2099
ApoI RAATTY 5 cut(s) 496, 555, 1688, 1829, 2486
ArsI GACNNNNNNTTYG 2 cut(s) 2114, 2146
AseI ATTAAT 1 cut(s) 885
Asp700I GAANNNNTTC 2 cut(s) 342, 1751
AspLEI GCGC 3 cut(s) 118, 278, 1312
AspS9I GGNCC 9 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164, 2565
AsuII TTCGAA 1 cut(s) 1982
AvaI CYCGRG 2 cut(s) 585, 1251
AvaII GGWCC 8 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164
AxyI CCTNAGG 1 cut(s) 2288
BaeGI GKGCMC 3 cut(s) 586, 2286, 2600
BamHI GGATCC 3 cut(s) 513, 1570, 2419
BanI GGYRCC 1 cut(s) 581
BanII GRGCYC 1 cut(s) 1565
BauI CACGAG 1 cut(s) 320
BbrPI CACGTG 1 cut(s) 1813
BbsI GAAGAC 6 cut(s) 464, 684, 945, 1653, 1961, 2066
Bbv12I GWGCWC 3 cut(s) 1565, 2286, 2600
BbvI GCAGC 7 cut(s) 105, 384, 428, 435, 619, 1090, 2086
BccI CCATC 2 cut(s) 485, 1793
BceAI ACGGC 7 cut(s) 71, 81, 129, 228, 300, 933, 2444
BciT130I CCWGG 3 cut(s) 236, 827, 1617
BciVI GTATCC 1 cut(s) 2253
BclI TGATCA 2 cut(s) 7, 574
BcoDI GTCTC 4 cut(s) 423, 1065, 1890, 2354
BcuI ACTAGT 1 cut(s) 2702
BfaI CTAG 3 cut(s) 1836, 2211, 2703
BfmI CTRYAG 4 cut(s) 360, 819, 1212, 2259
BfoI RGCGCY 1 cut(s) 119
BfuAI ACCTGC 1 cut(s) 813
BfuI GTATCC 1 cut(s) 2253
BglI GCCNNNNNGGC 1 cut(s) 284
BlpI GCTNAGC 1 cut(s) 762
BmcAI AGTACT 2 cut(s) 995, 2691
Bme1390I CCNGG 3 cut(s) 236, 827, 1617
Bme18I GGWCC 8 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164
BmeT110I CYCGRG 2 cut(s) 585, 1251
BmgBI CACGTC 3 cut(s) 70, 777, 2347
BmgT120I GGNCC 9 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164, 2565
BmiI GGNNCC 5 cut(s) 184, 515, 583, 1572, 2421
BmrFI CCNGG 3 cut(s) 236, 827, 1617
BmrI ACTGGG 1 cut(s) 677
BmsI GCATC 6 cut(s) 469, 475, 1015, 1198, 2440, 2547
BmuI ACTGGG 1 cut(s) 677
BoxI GACNNNNGTC 1 cut(s) 1089
BpiI GAAGAC 6 cut(s) 464, 684, 945, 1653, 1961, 2066
BplI GAGNNNNNCTC 4 cut(s) 1858, 1890, 2216, 2248
Bpu10I CCTNAGC 1 cut(s) 420
Bpu1102I GCTNAGC 1 cut(s) 762
Bpu14I TTCGAA 1 cut(s) 1982
BpuEI CTTGAG 6 cut(s) 680, 822, 952, 1533, 1924, 2185
BsaAI YACGTR 1 cut(s) 1813
BsaHI GRCGYC 1 cut(s) 690
BsaJI CCNNGG 9 cut(s) 54, 186, 234, 235, 282, 975, 1516, 1616, 2215
BsaWI WCCGGW 1 cut(s) 1086
BsaXI ACNNNNNCTCC 6 cut(s) 215, 245, 1836, 1866, 2435, 2465
Bsc4I CCNNNNNNNGG 6 cut(s) 180, 673, 1490, 2237, 2238, 2460
Bse118I RCCGGY 1 cut(s) 635
Bse1I ACTGG 3 cut(s) 683, 1526, 1707
Bse21I CCTNAGG 1 cut(s) 2288
Bse3DI GCAATG 1 cut(s) 2185
BseBI CCWGG 3 cut(s) 236, 827, 1617
BseDI CCNNGG 9 cut(s) 54, 186, 234, 235, 282, 975, 1516, 1616, 2215
BseGI GGATG 2 cut(s) 408, 1019
BseLI CCNNNNNNNGG 6 cut(s) 180, 673, 1490, 2237, 2238, 2460
BseMI GCAATG 1 cut(s) 2185
BseNI ACTGG 3 cut(s) 683, 1526, 1707
BseRI GAGGAG 8 cut(s) 325, 441, 1038, 1067, 1070, 1202, 1295, 2224
BseSI GKGCMC 3 cut(s) 586, 2286, 2600
BseX3I CGGCCG 1 cut(s) 241
BseXI GCAGC 7 cut(s) 105, 384, 428, 435, 619, 1090, 2086
BsgI GTGCAG 3 cut(s) 435, 1878, 2404
Bsh1236I CGCG 1 cut(s) 276
Bsh1285I CGRYCG 1 cut(s) 244
BshFI GGCC 6 cut(s) 96, 243, 269, 1825, 1840, 2567
BshNI GGYRCC 1 cut(s) 581
BsiEI CGRYCG 1 cut(s) 244
BsiHKAI GWGCWC 3 cut(s) 1565, 2286, 2600
BsiHKCI CYCGRG 2 cut(s) 585, 1251
BsiSI CCGG 4 cut(s) 636, 1087, 1822, 2355
BslFI GGGAC 6 cut(s) 196, 217, 398, 525, 2391, 2431
BslI CCNNNNNNNGG 6 cut(s) 180, 673, 1490, 2237, 2238, 2460
BsmAI GTCTC 4 cut(s) 423, 1065, 1890, 2354
BsmBI CGTCTC 1 cut(s) 423
BsmFI GGGAC 6 cut(s) 196, 217, 398, 525, 2391, 2431
BsmI GAATGC 1 cut(s) 1642
BsnI GGCC 6 cut(s) 96, 243, 269, 1825, 1840, 2567
BsoBI CYCGRG 2 cut(s) 585, 1251
Bsp119I TTCGAA 1 cut(s) 1982
Bsp1286I GDGCHC 4 cut(s) 586, 1565, 2286, 2600
Bsp1720I GCTNAGC 1 cut(s) 762
Bsp19I CCATGG 1 cut(s) 2215
BspACI CCGC 9 cut(s) 132, 240, 266, 375, 808, 945, 1911, 2390, 2614
BspANI GGCC 6 cut(s) 96, 243, 269, 1825, 1840, 2567
BspFNI CGCG 1 cut(s) 276
BspLI GGNNCC 5 cut(s) 184, 515, 583, 1572, 2421
BspMAI CTGCAG 1 cut(s) 2263
BspMI ACCTGC 1 cut(s) 813
BspQI GCTCTTC 2 cut(s) 356, 510
BspT104I TTCGAA 1 cut(s) 1982
BspT107I GGYRCC 1 cut(s) 581
BsrDI GCAATG 1 cut(s) 2185
BsrFI RCCGGY 1 cut(s) 635
BsrI ACTGG 3 cut(s) 683, 1526, 1707
BssAI RCCGGY 1 cut(s) 635
BssECI CCNNGG 9 cut(s) 54, 186, 234, 235, 282, 975, 1516, 1616, 2215
BssNI GRCGYC 1 cut(s) 690
BssSI CACGAG 1 cut(s) 320
BssT1I CCWWGG 5 cut(s) 54, 186, 975, 1516, 2215
Bst2BI CACGAG 1 cut(s) 320
Bst2UI CCWGG 3 cut(s) 236, 827, 1617
Bst4CI ACNGT 6 cut(s) 31, 874, 1771, 2156, 2382, 2606
Bst6I CTCTTC 3 cut(s) 356, 510, 1179
BstACI GRCGYC 1 cut(s) 690
BstAPI GCANNNNNTGC 1 cut(s) 2557
BstBAI YACGTR 1 cut(s) 1813
BstBI TTCGAA 1 cut(s) 1982
BstC8I GCNNGC 5 cut(s) 1308, 2352, 2542, 2616, 2654
BstDSI CCRYGG 2 cut(s) 282, 2215
BstENI CCTNNNNNAGG 1 cut(s) 1488
BstF5I GGATG 2 cut(s) 408, 1019
BstFNI CGCG 1 cut(s) 276
BstH2I RGCGCY 1 cut(s) 119
BstHHI GCGC 3 cut(s) 118, 278, 1312
BstMAI GTCTC 4 cut(s) 423, 1065, 1890, 2354
BstMCI CGRYCG 1 cut(s) 244
BstMWI GCNNNNNNNGC 9 cut(s) 71, 275, 284, 1298, 1307, 1444, 2096, 2557, 2624
BstNI CCWGG 3 cut(s) 236, 827, 1617
BstNSI RCATGY 1 cut(s) 2544
BstPAI GACNNNNGTC 1 cut(s) 1089
BstSCI CCNGG 3 cut(s) 234, 825, 1615
BstSFI CTRYAG 4 cut(s) 360, 819, 1212, 2259
BstSLI GKGCMC 3 cut(s) 586, 2286, 2600
BstUI CGCG 1 cut(s) 276
BstV1I GCAGC 7 cut(s) 105, 384, 428, 435, 619, 1090, 2086
BstV2I GAAGAC 6 cut(s) 464, 684, 945, 1653, 1961, 2066
BstX2I RGATCY 4 cut(s) 513, 1570, 2314, 2419
BstYI RGATCY 4 cut(s) 513, 1570, 2314, 2419
BstZI CGGCCG 1 cut(s) 241
Bsu36I CCTNAGG 1 cut(s) 2288
BsuI GTATCC 1 cut(s) 2253
BsuRI GGCC 6 cut(s) 96, 243, 269, 1825, 1840, 2567
BtgI CCRYGG 2 cut(s) 282, 2215
BtrI CACGTC 3 cut(s) 70, 777, 2347
BtsCI GGATG 2 cut(s) 408, 1019
BtsI GCAGTG 2 cut(s) 2023, 2392
BveI ACCTGC 1 cut(s) 813
Cac8I GCNNGC 5 cut(s) 1308, 2352, 2542, 2616, 2654
CfoI GCGC 3 cut(s) 118, 278, 1312
Cfr10I RCCGGY 1 cut(s) 635
Cfr13I GGNCC 9 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164, 2565
CseI GACGC 2 cut(s) 240, 679
Csp6I GTAC 8 cut(s) 27, 246, 915, 994, 1767, 2273, 2672, 2690
CviAII CATG 5 cut(s) 578, 1324, 1587, 2216, 2541
CviQI GTAC 8 cut(s) 27, 246, 915, 994, 1767, 2273, 2672, 2690
DraIII CACNNNGTG 1 cut(s) 1049
EaeI YGGCCR 3 cut(s) 241, 267, 1823
EagI CGGCCG 1 cut(s) 241
Eam1104I CTCTTC 3 cut(s) 356, 510, 1179
EarI CTCTTC 3 cut(s) 356, 510, 1179
Ecl136II GAGCTC 1 cut(s) 1563
EclXI CGGCCG 1 cut(s) 241
Eco130I CCWWGG 5 cut(s) 54, 186, 975, 1516, 2215
Eco147I AGGCCT 1 cut(s) 1840
Eco24I GRGCYC 1 cut(s) 1565
Eco47I GGWCC 8 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164
Eco52I CGGCCG 1 cut(s) 241
Eco53kI GAGCTC 1 cut(s) 1563
Eco57I CTGAAG 7 cut(s) 329, 1134, 1278, 1663, 1955, 2060, 2102
Eco72I CACGTG 1 cut(s) 1813
Eco81I CCTNAGG 1 cut(s) 2288
Eco88I CYCGRG 2 cut(s) 585, 1251
EcoICRI GAGCTC 1 cut(s) 1563
EcoNI CCTNNNNNAGG 1 cut(s) 1488
EcoO109I RGGNCCY 5 cut(s) 664, 1996, 2080, 2122, 2164
EcoRII CCWGG 3 cut(s) 234, 825, 1615
EcoT14I CCWWGG 5 cut(s) 54, 186, 975, 1516, 2215
EcoT38I GRGCYC 1 cut(s) 1565
ErhI CCWWGG 5 cut(s) 54, 186, 975, 1516, 2215
Esp3I CGTCTC 1 cut(s) 423
FaeI CATG 5 cut(s) 581, 1327, 1590, 2219, 2544
FalI AAGNNNNNCTT 2 cut(s) 211, 243
FaqI GGGAC 6 cut(s) 196, 217, 398, 525, 2391, 2431
FatI CATG 5 cut(s) 577, 1323, 1586, 2215, 2540
FauI CCCGC 2 cut(s) 2383, 2607
FbaI TGATCA 2 cut(s) 7, 574
FokI GGATG 2 cut(s) 395, 1026
FriOI GRGCYC 1 cut(s) 1565
FspBI CTAG 3 cut(s) 1836, 2211, 2703
GlaI GCGC 3 cut(s) 117, 277, 1311
HaeII RGCGCY 1 cut(s) 119
HaeIII GGCC 6 cut(s) 96, 243, 269, 1825, 1840, 2567
HapII CCGG 4 cut(s) 636, 1087, 1822, 2355
HgaI GACGC 2 cut(s) 240, 679
HhaI GCGC 3 cut(s) 118, 278, 1312
Hin1I GRCGYC 1 cut(s) 690
Hin1II CATG 5 cut(s) 581, 1327, 1590, 2219, 2544
Hin6I GCGC 3 cut(s) 116, 276, 1310
HinP1I GCGC 3 cut(s) 116, 276, 1310
HincII GTYRAC 5 cut(s) 145, 615, 930, 964, 2008
HindII GTYRAC 5 cut(s) 145, 615, 930, 964, 2008
HpaI GTTAAC 4 cut(s) 145, 615, 964, 2008
HpaII CCGG 4 cut(s) 636, 1087, 1822, 2355
Hpy99I CGWCG 2 cut(s) 131, 256
HpyCH4III ACNGT 6 cut(s) 31, 874, 1771, 2156, 2382, 2606
HpyCH4IV ACGT 5 cut(s) 69, 776, 1795, 1812, 2346
HpyF10VI GCNNNNNNNGC 9 cut(s) 71, 275, 284, 1298, 1307, 1444, 2096, 2557, 2624
HpySE526I ACGT 5 cut(s) 69, 776, 1795, 1812, 2346
Hsp92I GRCGYC 1 cut(s) 690
Hsp92II CATG 5 cut(s) 581, 1327, 1590, 2219, 2544
HspAI GCGC 3 cut(s) 116, 276, 1310
Ksp22I TGATCA 2 cut(s) 7, 574
KspAI GTTAAC 4 cut(s) 145, 615, 964, 2008
LguI GCTCTTC 2 cut(s) 356, 510
LmnI GCTCC 6 cut(s) 356, 782, 1025, 1079, 1376, 2463
Lsp1109I GCAGC 7 cut(s) 105, 384, 428, 435, 619, 1090, 2086
LweI GCATC 6 cut(s) 469, 475, 1015, 1198, 2440, 2547
MaeI CTAG 3 cut(s) 1836, 2211, 2703
MaeII ACGT 5 cut(s) 69, 776, 1795, 1812, 2346
MfeI CAATTG 1 cut(s) 2046
MflI RGATCY 4 cut(s) 513, 1570, 2314, 2419
MhlI GDGCHC 4 cut(s) 586, 1565, 2286, 2600
MlyI GAGTC 6 cut(s) 995, 1067, 1099, 1845, 2015, 2453
MmeI TCCRAC 2 cut(s) 654, 1829
MroXI GAANNNNTTC 2 cut(s) 342, 1751
MslI CAYNNNNRTG 2 cut(s) 1322, 2647
MspA1I CMGCKG 3 cut(s) 375, 448, 2090
MspI CCGG 4 cut(s) 636, 1087, 1822, 2355
MspR9I CCNGG 3 cut(s) 236, 827, 1617
MunI CAATTG 1 cut(s) 2046
Mva1269I GAATGC 1 cut(s) 1642
MvaI CCWGG 3 cut(s) 236, 827, 1617
MvnI CGCG 1 cut(s) 276
MwoI GCNNNNNNNGC 9 cut(s) 71, 275, 284, 1298, 1307, 1444, 2096, 2557, 2624
NcoI CCATGG 1 cut(s) 2215
NlaIII CATG 5 cut(s) 581, 1327, 1590, 2219, 2544
NlaIV GGNNCC 5 cut(s) 184, 515, 583, 1572, 2421
NmeAIII GCCGAG 1 cut(s) 160
NmuCI GTSAC 8 cut(s) 196, 394, 1267, 1395, 1736, 2018, 2206, 2660
NspI RCATGY 1 cut(s) 2544
NspV TTCGAA 1 cut(s) 1982
PaeI GCATGC 1 cut(s) 2544
PaeR7I CTCGAG 1 cut(s) 1251
PasI CCCWGGG 1 cut(s) 235
PceI AGGCCT 1 cut(s) 1840
PciSI GCTCTTC 2 cut(s) 356, 510
PcsI WCGNNNNNNNCGW 1 cut(s) 132
PctI GAATGC 1 cut(s) 1642
PdmI GAANNNNTTC 2 cut(s) 342, 1751
PfeI GAWTC 8 cut(s) 149, 170, 176, 1157, 1777, 1958, 2105, 2147
PflMI CCANNNNNTGG 1 cut(s) 2460
PleI GAGTC 6 cut(s) 995, 1066, 1098, 1845, 2015, 2452
PmaCI CACGTG 1 cut(s) 1813
PmlI CACGTG 1 cut(s) 1813
PpsI GAGTC 6 cut(s) 995, 1066, 1098, 1845, 2015, 2452
Ppu21I YACGTR 1 cut(s) 1813
PpuMI RGGWCCY 5 cut(s) 664, 1996, 2080, 2122, 2164
PshAI GACNNNNGTC 1 cut(s) 1089
PshBI ATTAAT 1 cut(s) 885
PsiI TTATAA 1 cut(s) 218
Psp124BI GAGCTC 1 cut(s) 1565
Psp5II RGGWCCY 5 cut(s) 664, 1996, 2080, 2122, 2164
Psp6I CCWGG 3 cut(s) 234, 825, 1615
PspCI CACGTG 1 cut(s) 1813
PspGI CCWGG 3 cut(s) 234, 825, 1615
PspN4I GGNNCC 5 cut(s) 184, 515, 583, 1572, 2421
PspPI GGNCC 9 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164, 2565
PspPPI RGGWCCY 5 cut(s) 664, 1996, 2080, 2122, 2164
PstI CTGCAG 1 cut(s) 2263
PsuI RGATCY 4 cut(s) 513, 1570, 2314, 2419
PvuII CAGCTG 2 cut(s) 448, 2090
RsaI GTAC 8 cut(s) 28, 247, 916, 995, 1768, 2274, 2673, 2691
RsaNI GTAC 8 cut(s) 27, 246, 915, 994, 1767, 2273, 2672, 2690
RseI CAYNNNNRTG 2 cut(s) 1322, 2647
SacI GAGCTC 1 cut(s) 1565
SapI GCTCTTC 2 cut(s) 356, 510
Sau96I GGNCC 9 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164, 2565
ScaI AGTACT 2 cut(s) 995, 2691
SchI GAGTC 6 cut(s) 995, 1067, 1099, 1845, 2015, 2453
ScrFI CCNGG 3 cut(s) 236, 827, 1617
SduI GDGCHC 4 cut(s) 586, 1565, 2286, 2600
SfaNI GCATC 6 cut(s) 469, 475, 1015, 1198, 2440, 2547
SfcI CTRYAG 4 cut(s) 360, 819, 1212, 2259
Sfr274I CTCGAG 1 cut(s) 1251
SfuI TTCGAA 1 cut(s) 1982
SinI GGWCC 8 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164
SlaI CTCGAG 1 cut(s) 1251
SmiMI CAYNNNNRTG 2 cut(s) 1322, 2647
SmlI CTYRAG 7 cut(s) 659, 837, 967, 1251, 1548, 1939, 2200
SmoI CTYRAG 7 cut(s) 659, 837, 967, 1251, 1548, 1939, 2200
SpeI ACTAGT 1 cut(s) 2702
SphI GCATGC 1 cut(s) 2544
SseBI AGGCCT 1 cut(s) 1840
SsiI CCGC 9 cut(s) 132, 240, 266, 375, 808, 945, 1911, 2390, 2614
SspI AATATT 3 cut(s) 1426, 1465, 2413
SspMI CTAG 3 cut(s) 1836, 2211, 2703
SstI GAGCTC 1 cut(s) 1565
StuI AGGCCT 1 cut(s) 1840
StyD4I CCNGG 3 cut(s) 234, 825, 1615
StyI CCWWGG 5 cut(s) 54, 186, 975, 1516, 2215
TaaI ACNGT 6 cut(s) 31, 874, 1771, 2156, 2382, 2606
TaiI ACGT 5 cut(s) 72, 779, 1798, 1815, 2349
TaqI TCGA 5 cut(s) 328, 1009, 1252, 1454, 1982
TatI WGTACW 5 cut(s) 993, 1766, 2272, 2671, 2689
TauI GCSGC 4 cut(s) 134, 243, 269, 811
TfiI GAWTC 8 cut(s) 149, 170, 176, 1157, 1777, 1958, 2105, 2147
TseFI GTSAC 8 cut(s) 196, 394, 1267, 1395, 1736, 2018, 2206, 2660
TseI GCWGC 7 cut(s) 118, 372, 416, 448, 632, 1103, 2099
Tsp45I GTSAC 8 cut(s) 196, 394, 1267, 1395, 1736, 2018, 2206, 2660
TspGWI ACGGA 4 cut(s) 142, 305, 401, 719
Van91I CCANNNNNTGG 1 cut(s) 2460
VneI GTGCAC 2 cut(s) 2282, 2596
VpaK11BI GGWCC 8 cut(s) 183, 664, 1933, 1975, 1996, 2080, 2122, 2164
VspI ATTAAT 1 cut(s) 885
XagI CCTNNNNNAGG 1 cut(s) 1488
XapI RAATTY 5 cut(s) 496, 555, 1688, 1829, 2486
XceI RCATGY 1 cut(s) 2544
XhoI CTCGAG 1 cut(s) 1251
XmnI GAANNNNTTC 2 cut(s) 342, 1751
XspI CTAG 3 cut(s) 1836, 2211, 2703
ZrmI AGTACT 2 cut(s) 995, 2691
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.