RLG00000015269

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr3
OG0000679
Physical Location & Seq
Reverse (-)
63811223 .. 63819753
8531 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000015269

Sequence Viewer

Length: 2178 bp
ATGTCCAGGTCAAGCAACGCTGGGCTTCAAGGATCGCCCAGTTTCTTAAGTCCGGCCAGTATGCAGAGCGTGTCGGCGCCGAAGCTCCGGTGTATCTTTCGGTTGTCCTTGAATACCTGGCAGCCGAGCCGCTTGCAATTTAACCTAGCCTCTGTAGATCTGTTCTACATTTCATTGAGGCTTCGGAGCTCGAACTTGCAGATGGTTCCGGAGCGGTCCGAGTCAGATCCGAGTTCCGCCTGTGACCTCCGACACGAGGCGAGTGAAGACCCAGTCGACTCGATCGAGGCCGAGACGAGTCTGATCAATGCCGTCTACCTCGACAGCAAGGCCGAGCTCGTGGCTCAGTCGAAGAGACTCGGCGGCCGGGCGTTAGACCTAGCGACTTCGTCGAAGCTCCTGCATCTCTGCTGCAACTTTGACTCGGTGGAGTGCGCCTCGGCGCTTCTCGGTGGACAGCTCGGAGCGACACCACTCGTGAACGAGTTAGACGAGGCCGGGAAAACGCCGCTACACACGGCGGTAGAGTCTCACGCGTTGAGGTGCGTGGAGGCGTTGCTGAAGAAACACGCTCGTACGGACCTGAGGACGAAGGACGGTGAGGCACAGCTACCGTTGGAGTTGTCGCTTACTGAGGCAAGGGCGCGTAGCTTCTCTGACGGCTCTGCTCATCGTTGCCGCCGAGAAGGTTATCGATTCCGTGTTGGAGTTGCTATTATATTGCTTCTTCTAGAGCATGGTGCTCTGGTAAGGCAAAGGAATAAAATGGGGTTGACAGCATTTCATATTGCTGCTGGTAATGGTAATTCAAAGGCCCTTGAGATCCTTCTGTTGGAAGACCCGTTAGCTGTCCAATATATGACGGAAATGAAAGAAACCCCCCTCTTTTTCGCTGTGAAGAATGGGAGTAAAGACTGCACTGAGCTTCTTTTGACATGGGGAGCAAATAGTGAAGTCCTTAACGTGCATGCGCAAAAAGCTATAGACCTGGCAACCTCTCAAGATATGCGTGACATAATGCTGAACATAACCACTGTTAGCCTCGTTAATCAGGCCTTCCCCAATCAACATAAATGTACTGCCTTAGAGGTGACAGATGAAGACACCACTACTGAAAGAAATGTTAACTCAATCACCAAGGCACAAGCTTGTAAGTACTTTGAATCTCATCAAGGATATGTCAGAGGAAAGTCGAACGAGTATATTATGGAAGGTGATAACCCTGAACAAGGTTCTTGCGCTGATAGATTAGTCCTTGGACAACCAGCGGCATGTTCCATTGAACCTCAAGCTCATGTGACCAAGAGCTCTGAGGACCCAAGCACTCCTACATGGCTAAAGGATCATTCAAAGTGTTTTCATGACCATTCAGTTGCCGATAGTACTGATTCAAAGTGTCTTCAGAATCTTTCAATTGGAGCTGGAAGCTATTATGATATTAAGAAGACATTTAATATTATGAAGTACTGCATTCCAAACAAGATTATGAGACATCCTGAAGTCATATTTAAGCTAGGAGAGTATGCTCGTGATAGGCCCCTGAGAAAGAATGTTGATTTGTATACCTGTTTTATTCTTGGTGTGCAGTCTGAGGAACCAACCCTTTATCGACTTGACAGTGACCTTGATCCTCCTTTAGAGAAATGTGATGGTGTAGAATTAAGTGGCACCGGGGATCTAGCGGCTTATGAAGCATTGACAGAAGAAACGGAGGAACCTGTGGAAGGTTTTCATGTAGAAGACACACATAGAAAAGTTAAATATGCATTTCTTAAGGCAGCTCTAACCGATCCCTCTACCGGTGGTATTATAACTGTGGCATATATTGATGATGATGGAATGGAAAGAATGTCCAGCAATACGGTTGTAGAATTGTATATACAATTCTATGACAAGTTCCATTATCTTGAAGACCGAATTGTGTTTCTATTTTATGATAATGTTCAAAAGAAAAGGCTTCCGTCATTTCTTGGAAAGAAAATCAATGCAAATGCTGTTGAAGAAGTTGGTCATCCTCTGACGCAGTTACATGGAGGGGAAGTTTGGCTAGAAACAGATGATGAAGGGGTCATTACGTTAGACACTGAGATTCAGATGCAGCGGATGGTGCCTTTATTAGATTCTATAAATTTTTCGGCAAGAAGATATACGTTGCCAAACAATCTATTGAACTTTTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

726

Amino Acids

80.65

Weight (kDa)

5.36

Isoelectric Point (pI)

48.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 130 - 194 1.3e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 239 - 316 2.6e-10 Ankyrin repeats (3 copies)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1811
Acc16I TGCGCA 1 cut(s) 972
AccB1I GGYRCC 3 cut(s) 76, 1667, 2107
AccBSI CCGCTC 1 cut(s) 214
AccI GTMKAC 3 cut(s) 276, 315, 1562
AccII CGCG 2 cut(s) 536, 646
AccIII TCCGGA 1 cut(s) 208
AclWI GGATC 7 cut(s) 40, 221, 817, 1350, 1622, 1683, 1784
AcoI YGGCCR 2 cut(s) 54, 364
AcsI RAATTY 1 cut(s) 2128
AcuI CTGAAG 3 cut(s) 581, 1385, 1518
AcyI GRCGYC 1 cut(s) 77
AfaI GTAC 5 cut(s) 577, 1078, 1157, 1384, 1466
AfiI CCNNNNNNNGG 5 cut(s) 256, 832, 1229, 1724, 1799
AflII CTTAAG 2 cut(s) 46, 1772
AflIII ACRYGT 1 cut(s) 534
AgeI ACCGGT 1 cut(s) 1799
AjnI CCWGG 3 cut(s) 5, 116, 987
Alw21I GWGCWC 4 cut(s) 191, 339, 745, 1310
Alw26I GTCTC 4 cut(s) 287, 349, 534, 1483
AlwI GGATC 7 cut(s) 40, 221, 817, 1350, 1622, 1683, 1784
Aor13HI TCCGGA 1 cut(s) 208
AoxI GGCC 8 cut(s) 54, 288, 330, 364, 495, 813, 1053, 1535
ApeKI GCWGC 5 cut(s) 121, 411, 791, 1778, 2098
ApoI RAATTY 1 cut(s) 2128
AsiGI ACCGGT 1 cut(s) 1799
Asp700I GAANNNNTTC 1 cut(s) 1728
AspLEI GCGC 6 cut(s) 79, 437, 445, 646, 973, 1241
AspS9I GGNCC 5 cut(s) 216, 580, 814, 1315, 1536
AsuC2I CCSGG 3 cut(s) 368, 499, 1672
AsuHPI GGTGA 4 cut(s) 611, 1102, 1126, 1226
AvaII GGWCC 3 cut(s) 216, 580, 1315
AxyI CCTNAGG 1 cut(s) 584
BanI GGYRCC 3 cut(s) 76, 1667, 2107
BanII GRGCYC 3 cut(s) 191, 339, 1310
BauI CACGAG 4 cut(s) 254, 338, 476, 1527
BbsI GAAGAC 7 cut(s) 273, 843, 1107, 1391, 1451, 1746, 1917
Bbv12I GWGCWC 4 cut(s) 191, 339, 745, 1310
BbvI GCAGC 5 cut(s) 133, 398, 778, 1790, 2110
BccI CCATC 4 cut(s) 196, 1643, 1829, 2098
BceAI ACGGC 3 cut(s) 296, 534, 676
BcgI CGANNNNNNTGC 4 cut(s) 115, 149, 382, 416
BciT130I CCWGG 3 cut(s) 7, 118, 989
BclI TGATCA 1 cut(s) 303
BcnI CCSGG 3 cut(s) 368, 499, 1672
BcoDI GTCTC 4 cut(s) 287, 349, 534, 1483
BfaI CTAG 6 cut(s) 146, 380, 731, 1514, 1679, 2048
BfmI CTRYAG 2 cut(s) 153, 981
BfoI RGCGCY 2 cut(s) 80, 446
BfrI CTTAAG 2 cut(s) 46, 1772
BglII AGATCT 1 cut(s) 157
BmcAI AGTACT 3 cut(s) 1157, 1384, 1466
Bme1390I CCNGG 6 cut(s) 7, 118, 368, 499, 989, 1672
Bme18I GGWCC 3 cut(s) 216, 580, 1315
BmgT120I GGNCC 5 cut(s) 216, 580, 814, 1315, 1536
BmiI GGNNCC 8 cut(s) 78, 207, 1317, 1538, 1596, 1669, 1716, 2109
BmrFI CCNGG 6 cut(s) 7, 118, 368, 499, 989, 1672
BmrI ACTGGG 2 cut(s) 33, 266
BmsI GCATC 2 cut(s) 412, 2085
BmuI ACTGGG 2 cut(s) 33, 266
BpiI GAAGAC 7 cut(s) 273, 843, 1107, 1391, 1451, 1746, 1917
BplI GAGNNNNNCTC 2 cut(s) 422, 454
BpuEI CTTGAG 3 cut(s) 839, 984, 1272
BpuMI CCSGG 3 cut(s) 368, 499, 1672
Bsa29I ATCGAT 1 cut(s) 694
BsaHI GRCGYC 1 cut(s) 77
BsaJI CCNNGG 4 cut(s) 438, 1137, 1255, 1671
BsaWI WCCGGW 3 cut(s) 87, 208, 1799
BsaXI ACNNNNNCTCC 2 cut(s) 2025, 2055
Bsc4I CCNNNNNNNGG 5 cut(s) 256, 832, 1229, 1724, 1799
Bse118I RCCGGY 1 cut(s) 1799
Bse1I ACTGG 3 cut(s) 39, 57, 272
Bse21I CCTNAGG 1 cut(s) 584
BseAI TCCGGA 1 cut(s) 208
BseBI CCWGG 3 cut(s) 7, 118, 989
BseCI ATCGAT 1 cut(s) 694
BseDI CCNNGG 4 cut(s) 438, 1137, 1255, 1671
BseGI GGATG 3 cut(s) 1492, 2011, 2109
BseLI CCNNNNNNNGG 5 cut(s) 256, 832, 1229, 1724, 1799
BseMII CTCAG 8 cut(s) 359, 575, 624, 912, 1302, 1532, 1581, 2076
BseNI ACTGG 3 cut(s) 39, 57, 272
BseX3I CGGCCG 1 cut(s) 364
BseXI GCAGC 5 cut(s) 133, 398, 778, 1790, 2110
BseYI CCCAGC 1 cut(s) 20
BsgI GTGCAG 2 cut(s) 901, 1604
Bsh1236I CGCG 2 cut(s) 536, 646
Bsh1285I CGRYCG 2 cut(s) 285, 367
BshFI GGCC 8 cut(s) 56, 290, 332, 366, 497, 815, 1055, 1537
BshNI GGYRCC 3 cut(s) 76, 1667, 2107
BshTI ACCGGT 1 cut(s) 1799
BshVI ATCGAT 1 cut(s) 694
BsiEI CGRYCG 2 cut(s) 285, 367
BsiHKAI GWGCWC 4 cut(s) 191, 339, 745, 1310
BsiSI CCGG 7 cut(s) 53, 88, 209, 367, 498, 1671, 1800
BsiWI CGTACG 1 cut(s) 575
BslI CCNNNNNNNGG 5 cut(s) 256, 832, 1229, 1724, 1799
BsmAI GTCTC 4 cut(s) 287, 349, 534, 1483
BsmBI CGTCTC 1 cut(s) 287
BsmI GAATGC 1 cut(s) 1470
BsnI GGCC 8 cut(s) 56, 290, 332, 366, 497, 815, 1055, 1537
Bsp1286I GDGCHC 4 cut(s) 191, 339, 745, 1310
Bsp13I TCCGGA 1 cut(s) 208
BspANI GGCC 8 cut(s) 56, 290, 332, 366, 497, 815, 1055, 1537
BspCNI CTCAG 8 cut(s) 358, 576, 625, 913, 1303, 1533, 1582, 2077
BspDI ATCGAT 1 cut(s) 694
BspEI TCCGGA 1 cut(s) 208
BspFNI CGCG 2 cut(s) 536, 646
BspHI TCATGA 1 cut(s) 1360
BspLI GGNNCC 8 cut(s) 78, 207, 1317, 1538, 1596, 1669, 1716, 2109
BspPI GGATC 7 cut(s) 40, 221, 817, 1350, 1622, 1683, 1784
BspT107I GGYRCC 3 cut(s) 76, 1667, 2107
BspTI CTTAAG 2 cut(s) 46, 1772
BsrBI CCGCTC 1 cut(s) 214
BsrFI RCCGGY 1 cut(s) 1799
BsrI ACTGG 3 cut(s) 39, 57, 272
BssAI RCCGGY 1 cut(s) 1799
BssECI CCNNGG 4 cut(s) 438, 1137, 1255, 1671
BssNAI GTATAC 1 cut(s) 1563
BssNI GRCGYC 1 cut(s) 77
BssSI CACGAG 4 cut(s) 254, 338, 476, 1527
BssT1I CCWWGG 2 cut(s) 1137, 1255
Bst1107I GTATAC 1 cut(s) 1563
Bst2BI CACGAG 4 cut(s) 254, 338, 476, 1527
Bst2UI CCWGG 3 cut(s) 7, 118, 989
Bst4CI ACNGT 6 cut(s) 599, 615, 1036, 1619, 1816, 1864
Bst6I CTCTTC 1 cut(s) 347
BstACI GRCGYC 1 cut(s) 77
BstAFI CTTAAG 2 cut(s) 46, 1772
BstC8I GCNNGC 2 cut(s) 134, 969
BstDEI CTNAG 9 cut(s) 345, 584, 633, 921, 1084, 1311, 1541, 1590, 2085
BstENI CCTNNNNNAGG 2 cut(s) 1227, 1722
BstF5I GGATG 3 cut(s) 1492, 2011, 2109
BstFNI CGCG 2 cut(s) 536, 646
BstH2I RGCGCY 2 cut(s) 80, 446
BstHHI GCGC 6 cut(s) 79, 437, 445, 646, 973, 1241
BstMAI GTCTC 4 cut(s) 287, 349, 534, 1483
BstMCI CGRYCG 2 cut(s) 285, 367
BstMWI GCNNNNNNNGC 3 cut(s) 977, 1691, 2107
BstNI CCWGG 3 cut(s) 7, 118, 989
BstNSI RCATGY 2 cut(s) 971, 1275
BstSCI CCNGG 6 cut(s) 5, 116, 366, 497, 987, 1670
BstSFI CTRYAG 2 cut(s) 153, 981
BstUI CGCG 2 cut(s) 536, 646
BstV1I GCAGC 5 cut(s) 133, 398, 778, 1790, 2110
BstV2I GAAGAC 7 cut(s) 273, 843, 1107, 1391, 1451, 1746, 1917
BstX2I RGATCY 4 cut(s) 157, 226, 822, 1675
BstYI RGATCY 4 cut(s) 157, 226, 822, 1675
BstZ17I GTATAC 1 cut(s) 1563
BstZI CGGCCG 1 cut(s) 364
Bsu15I ATCGAT 1 cut(s) 694
Bsu36I CCTNAGG 1 cut(s) 584
BsuRI GGCC 8 cut(s) 56, 290, 332, 366, 497, 815, 1055, 1537
BsuTUI ATCGAT 1 cut(s) 694
BtsCI GGATG 3 cut(s) 1492, 2011, 2109
BtsIMutI CAGTG 4 cut(s) 918, 1032, 1624, 2082
Cac8I GCNNGC 2 cut(s) 134, 969
CciI TCATGA 1 cut(s) 1360
CfoI GCGC 6 cut(s) 79, 437, 445, 646, 973, 1241
Cfr10I RCCGGY 1 cut(s) 1799
Cfr13I GGNCC 5 cut(s) 216, 580, 814, 1315, 1536
ClaI ATCGAT 1 cut(s) 694
CpoI CGGWCCG 1 cut(s) 216
CseI GACGC 1 cut(s) 2029
Csp6I GTAC 5 cut(s) 576, 1077, 1156, 1383, 1465
CspAI ACCGGT 1 cut(s) 1799
CspI CGGWCCG 1 cut(s) 216
CviAII CATG 9 cut(s) 737, 936, 968, 1272, 1295, 1332, 1361, 1733, 2030
CviQI GTAC 5 cut(s) 576, 1077, 1156, 1383, 1465
DdeI CTNAG 9 cut(s) 345, 584, 633, 921, 1084, 1311, 1541, 1590, 2085
DinI GGCGCC 1 cut(s) 78
EaeI YGGCCR 2 cut(s) 54, 364
EagI CGGCCG 1 cut(s) 364
Eam1104I CTCTTC 1 cut(s) 347
EarI CTCTTC 1 cut(s) 347
EciI GGCGGA 1 cut(s) 226
Ecl136II GAGCTC 3 cut(s) 189, 337, 1308
EclXI CGGCCG 1 cut(s) 364
Eco130I CCWWGG 2 cut(s) 1137, 1255
Eco147I AGGCCT 1 cut(s) 1055
Eco24I GRGCYC 3 cut(s) 191, 339, 1310
Eco47I GGWCC 3 cut(s) 216, 580, 1315
Eco52I CGGCCG 1 cut(s) 364
Eco53kI GAGCTC 3 cut(s) 189, 337, 1308
Eco57I CTGAAG 3 cut(s) 581, 1385, 1518
Eco81I CCTNAGG 1 cut(s) 584
EcoICRI GAGCTC 3 cut(s) 189, 337, 1308
EcoNI CCTNNNNNAGG 2 cut(s) 1227, 1722
EcoO109I RGGNCCY 3 cut(s) 814, 1315, 1536
EcoRII CCWGG 3 cut(s) 5, 116, 987
EcoT14I CCWWGG 2 cut(s) 1137, 1255
EcoT22I ATGCAT 1 cut(s) 1768
EcoT38I GRGCYC 3 cut(s) 191, 339, 1310
EgeI GGCGCC 1 cut(s) 78
EheI GGCGCC 1 cut(s) 78
ErhI CCWWGG 2 cut(s) 1137, 1255
Esp3I CGTCTC 1 cut(s) 287
FaeI CATG 9 cut(s) 740, 939, 971, 1275, 1298, 1335, 1364, 1736, 2033
FatI CATG 9 cut(s) 736, 935, 967, 1271, 1294, 1331, 1360, 1732, 2029
FbaI TGATCA 1 cut(s) 303
FblI GTMKAC 3 cut(s) 276, 315, 1562
FokI GGATG 3 cut(s) 1479, 1998, 2116
FriOI GRGCYC 3 cut(s) 191, 339, 1310
FspBI CTAG 6 cut(s) 146, 380, 731, 1514, 1679, 2048
FspI TGCGCA 1 cut(s) 972
GlaI GCGC 6 cut(s) 78, 436, 444, 645, 972, 1240
GsaI CCCAGC 1 cut(s) 24
HaeII RGCGCY 2 cut(s) 80, 446
HaeIII GGCC 8 cut(s) 56, 290, 332, 366, 497, 815, 1055, 1537
HapII CCGG 7 cut(s) 53, 88, 209, 367, 498, 1671, 1800
HgaI GACGC 1 cut(s) 2029
HhaI GCGC 6 cut(s) 79, 437, 445, 646, 973, 1241
Hin1I GRCGYC 1 cut(s) 77
Hin1II CATG 9 cut(s) 740, 939, 971, 1275, 1298, 1335, 1364, 1736, 2033
Hin6I GCGC 6 cut(s) 77, 435, 443, 644, 971, 1239
HinP1I GCGC 6 cut(s) 77, 435, 443, 644, 971, 1239
HincII GTYRAC 3 cut(s) 277, 774, 1126
HindII GTYRAC 3 cut(s) 277, 774, 1126
HindIII AAGCTT 1 cut(s) 1146
HpaI GTTAAC 1 cut(s) 1126
HpaII CCGG 7 cut(s) 53, 88, 209, 367, 498, 1671, 1800
HphI GGTGA 4 cut(s) 611, 1102, 1126, 1226
Hpy166II GTNNAC 7 cut(s) 277, 316, 455, 481, 774, 1126, 1563
Hpy188III TCNNGA 8 cut(s) 209, 478, 731, 1001, 1361, 1496, 1529, 1907
Hpy8I GTNNAC 7 cut(s) 277, 316, 455, 481, 774, 1126, 1563
Hpy99I CGWCG 1 cut(s) 394
HpyAV CCTTC 7 cut(s) 586, 680, 836, 1066, 1205, 1718, 2057
HpyCH4III ACNGT 6 cut(s) 599, 615, 1036, 1619, 1816, 1864
HpyCH4IV ACGT 3 cut(s) 963, 2075, 2150
HpyF10VI GCNNNNNNNGC 3 cut(s) 977, 1691, 2107
HpyF3I CTNAG 9 cut(s) 345, 584, 633, 921, 1084, 1311, 1541, 1590, 2085
HpySE526I ACGT 3 cut(s) 963, 2075, 2150
Hsp92I GRCGYC 1 cut(s) 77
Hsp92II CATG 9 cut(s) 740, 939, 971, 1275, 1298, 1335, 1364, 1736, 2033
HspAI GCGC 6 cut(s) 77, 435, 443, 644, 971, 1239
KasI GGCGCC 1 cut(s) 76
Kpn2I TCCGGA 1 cut(s) 208
Ksp22I TGATCA 1 cut(s) 303
KspAI GTTAAC 1 cut(s) 1126
LmnI GCTCC 7 cut(s) 90, 186, 211, 402, 464, 941, 1418
Lsp1109I GCAGC 5 cut(s) 133, 398, 778, 1790, 2110
LweI GCATC 2 cut(s) 412, 2085
MaeI CTAG 6 cut(s) 146, 380, 731, 1514, 1679, 2048
MaeII ACGT 3 cut(s) 963, 2075, 2150
MaeIII GTNAC 6 cut(s) 242, 1010, 1090, 1297, 1619, 2025
MbiI CCGCTC 1 cut(s) 214
MfeI CAATTG 1 cut(s) 1413
MflI RGATCY 4 cut(s) 157, 226, 822, 1675
MhlI GDGCHC 4 cut(s) 191, 339, 745, 1310
MluCI AATT 8 cut(s) 137, 805, 1413, 1658, 1871, 1883, 1917, 2128
MluI ACGCGT 1 cut(s) 534
Mly113I GGCGCC 1 cut(s) 77
MlyI GAGTC 6 cut(s) 230, 272, 307, 351, 416, 536
MmeI TCCRAC 4 cut(s) 274, 597, 685, 813
Mph1103I ATGCAT 1 cut(s) 1768
MroI TCCGGA 1 cut(s) 208
MroXI GAANNNNTTC 1 cut(s) 1728
MspA1I CMGCKG 2 cut(s) 1268, 2101
MspCI CTTAAG 2 cut(s) 46, 1772
MspI CCGG 7 cut(s) 53, 88, 209, 367, 498, 1671, 1800
MspR9I CCNGG 6 cut(s) 7, 118, 368, 499, 989, 1672
MunI CAATTG 1 cut(s) 1413
Mva1269I GAATGC 1 cut(s) 1470
MvaI CCWGG 3 cut(s) 7, 118, 989
MvnI CGCG 2 cut(s) 536, 646
MwoI GCNNNNNNNGC 3 cut(s) 977, 1691, 2107
NarI GGCGCC 1 cut(s) 77
NciI CCSGG 3 cut(s) 368, 499, 1672
NlaIII CATG 9 cut(s) 740, 939, 971, 1275, 1298, 1335, 1364, 1736, 2033
NlaIV GGNNCC 8 cut(s) 78, 207, 1317, 1538, 1596, 1669, 1716, 2109
NmeAIII GCCGAG 6 cut(s) 150, 316, 339, 358, 419, 707
NmuCI GTSAC 5 cut(s) 242, 1010, 1090, 1297, 1619
NsbI TGCGCA 1 cut(s) 972
NsiI ATGCAT 1 cut(s) 1768
NspI RCATGY 2 cut(s) 971, 1275
PaeI GCATGC 1 cut(s) 971
PagI TCATGA 1 cut(s) 1360
PceI AGGCCT 1 cut(s) 1055
PcsI WCGNNNNNNNCGW 3 cut(s) 282, 489, 679
PctI GAATGC 1 cut(s) 1470
PdmI GAANNNNTTC 1 cut(s) 1728
PfeI GAWTC 6 cut(s) 696, 1163, 1388, 1405, 2089, 2120
Pfl23II CGTACG 1 cut(s) 575
PflFI GACNNNGTC 2 cut(s) 272, 388
PinAI ACCGGT 1 cut(s) 1799
Ple19I CGATCG 1 cut(s) 285
PleI GAGTC 6 cut(s) 229, 272, 306, 351, 416, 535
PluTI GGCGCC 1 cut(s) 80
PpsI GAGTC 6 cut(s) 229, 272, 306, 351, 416, 535
PpuMI RGGWCCY 1 cut(s) 1315
PsiI TTATAA 1 cut(s) 1811
Psp124BI GAGCTC 3 cut(s) 191, 339, 1310
Psp5II RGGWCCY 1 cut(s) 1315
Psp6I CCWGG 3 cut(s) 5, 116, 987
PspFI CCCAGC 1 cut(s) 20
PspGI CCWGG 3 cut(s) 5, 116, 987
PspLI CGTACG 1 cut(s) 575
PspN4I GGNNCC 8 cut(s) 78, 207, 1317, 1538, 1596, 1669, 1716, 2109
PspPI GGNCC 5 cut(s) 216, 580, 814, 1315, 1536
PspPPI RGGWCCY 1 cut(s) 1315
PsuI RGATCY 4 cut(s) 157, 226, 822, 1675
PsyI GACNNNGTC 2 cut(s) 272, 388
PvuI CGATCG 1 cut(s) 285
RsaI GTAC 5 cut(s) 577, 1078, 1157, 1384, 1466
RsaNI GTAC 5 cut(s) 576, 1077, 1156, 1383, 1465
Rsr2I CGGWCCG 1 cut(s) 216
RsrII CGGWCCG 1 cut(s) 216
SacI GAGCTC 3 cut(s) 191, 339, 1310
SalI GTCGAC 1 cut(s) 275
Sau96I GGNCC 5 cut(s) 216, 580, 814, 1315, 1536
ScaI AGTACT 3 cut(s) 1157, 1384, 1466
SchI GAGTC 6 cut(s) 230, 272, 307, 351, 416, 536
ScrFI CCNGG 6 cut(s) 7, 118, 368, 499, 989, 1672
SduI GDGCHC 4 cut(s) 191, 339, 745, 1310
SfaNI GCATC 2 cut(s) 412, 2085
SfcI CTRYAG 2 cut(s) 153, 981
SfoI GGCGCC 1 cut(s) 78
SinI GGWCC 3 cut(s) 216, 580, 1315
SmlI CTYRAG 5 cut(s) 46, 818, 999, 1287, 1772
SmoI CTYRAG 5 cut(s) 46, 818, 999, 1287, 1772
SphI GCATGC 1 cut(s) 971
Sse9I AATT 8 cut(s) 137, 805, 1413, 1658, 1871, 1883, 1917, 2128
SseBI AGGCCT 1 cut(s) 1055
SspDI GGCGCC 1 cut(s) 76
SspI AATATT 1 cut(s) 1456
SspMI CTAG 6 cut(s) 146, 380, 731, 1514, 1679, 2048
SstI GAGCTC 3 cut(s) 191, 339, 1310
StuI AGGCCT 1 cut(s) 1055
StyD4I CCNGG 6 cut(s) 5, 116, 366, 497, 987, 1670
StyI CCWWGG 2 cut(s) 1137, 1255
TaaI ACNGT 6 cut(s) 599, 615, 1036, 1619, 1816, 1864
TaiI ACGT 3 cut(s) 966, 2078, 2153
TaqII GACCGA 1 cut(s) 1929
TasI AATT 8 cut(s) 137, 805, 1413, 1658, 1871, 1883, 1917, 2128
TatI WGTACW 4 cut(s) 1076, 1155, 1382, 1464
TauI GCSGC 6 cut(s) 132, 366, 511, 681, 1271, 1685
TfiI GAWTC 6 cut(s) 696, 1163, 1388, 1405, 2089, 2120
TscAI CASTG 4 cut(s) 925, 1039, 1624, 2089
TseFI GTSAC 5 cut(s) 242, 1010, 1090, 1297, 1619
TseI GCWGC 5 cut(s) 121, 411, 791, 1778, 2098
Tsp45I GTSAC 5 cut(s) 242, 1010, 1090, 1297, 1619
TspDTI ATGAA 9 cut(s) 162, 773, 884, 1113, 1349, 1475, 1704, 1721, 2076
TspGWI ACGGA 5 cut(s) 593, 689, 878, 1724, 1950
TspRI CASTG 4 cut(s) 925, 1039, 1624, 2089
Tth111I GACNNNGTC 2 cut(s) 272, 388
Vha464I CTTAAG 2 cut(s) 46, 1772
VpaK11BI GGWCC 3 cut(s) 216, 580, 1315
XagI CCTNNNNNAGG 2 cut(s) 1227, 1722
XapI RAATTY 1 cut(s) 2128
XbaI TCTAGA 1 cut(s) 730
XceI RCATGY 2 cut(s) 971, 1275
XmiI GTMKAC 3 cut(s) 276, 315, 1562
XmnI GAANNNNTTC 1 cut(s) 1728
XspI CTAG 6 cut(s) 146, 380, 731, 1514, 1679, 2048
ZrmI AGTACT 3 cut(s) 1157, 1384, 1466
Zsp2I ATGCAT 1 cut(s) 1768
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.