Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000679

Physical Location & Seq

Genomic Coordinates Forward (+)

78803050 .. 78814827

Gene Structure 11778 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G051130.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2172 bp

ATGGAAGTGCGTCGGAGTCCCAACTTCAATTTGATTGCTGAGGTGGCTTATTCATATGCCGTTAAAGGGCGCGTAGCTTCTCTGACTGCTCTACTCATCGTTGCCGCCGAGAAGGTTAACAATTCCGTCTTGGAATTGCGTGATTCCGACTCAGGTCGCAAGGAGAAGGCTTTGGCCCTGGGCTGCCGTACAAGGGAGAGCGAAAATTCAGAGAGAAGGAAGCTGTTGGTTTGCGAGATAGAGCTGCTTCAGCTCTTCGGAGTTGTAGCTCAGAGCAGCGGTGGTGGGGACAAGAAGGTGACTTCGCCACTTATCCTTGCAGCTCAGGTGAGACAAATATACATGTCAAATGCTGATGCAGATGGAAATTCTGCTCTTCATTGGATACTTGGGTTGTCGAGATTATCGTGTCCACTACAGATAAGAATTGTATTGCTTCTCATTGAGCATGGCGCCCTAGTAAGCCAAAGGAATAAATTGGGGTTGACAGCATTTCATATTGCTGCCGGTAATGGTAAAGCTGAGGCCCTTGAGAAACCCCTGTTTTTCGCTGTGAAGAATGAGAGTGAGGACTGTGCTAAGCTTCTTTTGACCTGGGGAGCAAATAGTGAAGTCCTTAATCTACGTACGCAAAGAGCTATAGACCTGGCAACCTCTCAAGAGATGTGTTACATATTGCTGAATCCAACCACTATTAGCCTTATTAATGATGCCTTCCCCTATCAGCTTAAATGTATGGCTTTAGAGATGGCAGATGAAGAGACCACTACCAAAAGAAATGTCAACTCAAGCACCAAGGCAAACGTTTGTAAGTACTTCAACCGTCATCAAGGATGTGTCAGAGGAGCAAAGTGCTTTAATTCACATTGTGAGGAGTCTCAGAAAGTGAAGGAGGGAGAAGACAGGAATCATTCTTCTGCTGATAAACTACTCAAACGCAAAATCTTTGTTGGAAGACTTCCTCCTTCAGTGGACTCTGATGCTTTGAGAAAGCTCTGTGAAGAAGAGTTTGGATCAGTGGAAGATGCTGTAGTTATTGTAACTCAAATAGAAAACAAGATACAATCTCGAGGCTTTGGTTTTACTAATTCACATTGGTGTGGAATGGGGAAATTTCTAGTAGTGCTAGCGCGCTACATCACCTTGAGAGGCAAGAAAGTTGAAATAAAAAGTTTGATTCCAAAAATGGTTTTGGGAGCTGACCTTGGAAAATGTCACCTCAACCACAAGATCAAGAGAAGACCGAACGAGAATATTGTGGAAGGTGATAACCCTGAACAAAGTTCTTGGGCTGATAGATTAGTCCTTAAACAACCAGCAGATTGTTCCATCGAACCTCAAGCACATGTTACCAAGAGCTCTGAGGACCCAAGCACTCCTACATGGCTAAAGGTTTTCAACAAGTGGTTTCCTGGGTTCTTACAAGGTCTGTCAAAGCATTCAAATTATGCTCTCTCTTCTCTAAAAGCTGACTTCAAGGCTAAATTTGGGTTAGAACTGGATCACTCATCTGTGGGCTACTCTAAGCTCAGAGACTTCCTGAAGCGTGTCTCTGATTTATGTACCATCGAGATTCTCCCCATATGCAAACATGGAACTCCAACTCACATGATCCTCCGTCCAAAATTTTCTAAACAACTCACACTGTCTTTGTCTGCATTTATTGTGAATGGTGGTGATTCAAAGTGTCTTTTATCCCTCTTAAGTGGCAATGGTGGTGATTTAAAGGATCTTCAGAACCTTTCAACTGACAGCGGTAGTGATGAGAAGTGTCTCCAGGACCTTCCAACTGACAATGCTGTTGATTCAAAGTGCCTTCAGGACCTTTCACTTGATTCTGGTGGTGATTCAGAGTGTGTTGGAGACGAAATGTATGGCTCAAGTGTCACTAGCCATGGGGAACCTCCTCTGGCACACTGTTTGCACCCAAGGTTCCTTCAATTCTTGAAGCTGGATCCTCTACTCCATGGTCAGAATGATACTGATGTGCTTGCTGGAGAGAGTGACAATGAAAAAGGACAGTGCAATGCAGGAGATAAGAATACAAGCGAATCATATTTCCTCCATGAATCTGATTCTTGCAAGGTTAAAGGCACTACAAACATTGCATGGGTTTCAAAAGAGTGTGTAGTCCTTGCCACTGATTCTCATGGTACTTGCAAAAGAGTTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

723

Amino Acids

79.54

Weight (kDa)

7.48

Isoelectric Point (pI)

45.11

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
RRM_1	PF00076	315 - 361	3e-06	RNA recognition motif
OST-HTH	PF12872	466 - 524	1e-07	OST-HTH/LOTUS domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000679)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G28880
fragaria_vesca	FvH4_1g02370 FvH4_1g02370 FvH4_6g48800 FvH4_6g48800 FvH4_6g48800 FvH4_6g49030 FvH4_6g49030 FvH4_6g49030
malus_domestica	MD09G1050300.v1.1
prunus_persica	Prupe.3G268600_v2.0.a1 Prupe.3G268600_v2.0.a1 Prupe.3G268600_v2.0.a1 Prupe.3G268600_v2.0.a1
rosa_chinensis	RchiOBHm_Chr2g0168671 RchiOBHm_Chr2g0169051 RchiOBHm_Chr2g0170061 RchiOBHm_Chr2g0170071 RchiOBHm_Chr6g0246231 RchiOBHm_Chr6g0246241
rosa_laevigata	RLG00000015269 RLG00000021799 RLG00000021800 RLG00000021827 RLG00000021828 RLG00000035229
rosa_multiflora	Rmu_sc0002416.1_g000001 Rmu_sc0009451.1_g000006 Rmu_sc0013078.1_g000013 Rmu_sc0032865.1_g000001 Rmu_ssc0000393.1_g000027
rosa_roxburghii	Rroxscaffold_2G00081630 Rroxscaffold_2G00082770 Rroxscaffold_7G00214740
rosa_rugosa	Rorug02G0534500 Rorug02G0536600 Rorug02G0545500 Rorug02G0545500 Rorug05G0519700 Rorug05G0519800
rosa_samantha	Rh2AG605400 Rh2AG608100 Rh2AG608200 Rh2AG617600 Rh2BG618300 Rh2BG620800 Rh2BG621000 Rh2BG621100 Rh2BG629100 Rh2CG586500 Rh2CG589800 Rh2CG589900 Rh2CG598400 Rh2DG628900 Rh2DG631400 Rh2DG631600 Rh2DG631700 Rh2DG640900 Rh5AG381700 Rh5BG393400 Rh5BG393500 Rh5CG417500 Rh6AG033900 Rh6BG029100 Rh6CG029300 Rh6CG029400 Rh6CG029500 Rh6CG220500 Rh6DG028400 Rh6DG028500
rosa_wichuraiana	Rw0G009340 Rw2G050180 Rw2G050430 Rw2G051130 Rw6G002900

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	452
AccII	CGCG	2 cut(s)	72, 1132
AciI	CCGC	3 cut(s)	105, 279, 1755
AclI	AACGTT	1 cut(s)	804
AclWI	GGATC	6 cut(s)	1021, 1509, 1606, 1737, 1949, 1962
AcsI	RAATTY	5 cut(s)	205, 367, 1112, 1484, 1625
AcuI	CTGAAG	5 cut(s)	233, 951, 1562, 1718, 1802
AcyI	GRCGYC	1 cut(s)	453
AdeI	CACNNNGTG	1 cut(s)	869
AfaI	GTAC	5 cut(s)	190, 628, 815, 1564, 2155
AfiI	CCNNNNNNNGG	2 cut(s)	66, 193
AflII	CTTAAG	1 cut(s)	1702
AflIII	ACRYGT	2 cut(s)	342, 1345
AjnI	CCWGG	5 cut(s)	177, 593, 645, 1411, 1776
AjuI	GAANNNNNNNTTGG	2 cut(s)	993, 1025
AleI	CACNNNNGTG	1 cut(s)	1096
Alw21I	GWGCWC	1 cut(s)	1361
Alw26I	GTCTC	7 cut(s)	325, 755, 882, 1527, 1555, 1778, 1857
AlwI	GGATC	6 cut(s)	1021, 1509, 1606, 1737, 1949, 1962
Ama87I	CYCGRG	1 cut(s)	1068
AoxI	GGCC	2 cut(s)	174, 525
ApeKI	GCWGC	5 cut(s)	183, 244, 276, 320, 503
ApoI	RAATTY	5 cut(s)	205, 367, 1112, 1484, 1625
ArsI	GACNNNNNNTTYG	2 cut(s)	765, 797
AseI	ATTAAT	1 cut(s)	705
AspLEI	GCGC	4 cut(s)	72, 455, 1132, 1134
AspS9I	GGNCC	5 cut(s)	175, 526, 1366, 1780, 1822
AsuHPI	GGTGA	8 cut(s)	310, 340, 1132, 1208, 1277, 1688, 1730, 1856
AsuNHI	GCTAGC	1 cut(s)	1126
AvaI	CYCGRG	1 cut(s)	1068
AvaII	GGWCC	3 cut(s)	1366, 1780, 1822
BaeI	ACNNNNGTAYC	4 cut(s)	377, 410, 1971, 2004
BamHI	GGATCC	1 cut(s)	1954
BanI	GGYRCC	1 cut(s)	452
BanII	GRGCYC	1 cut(s)	1361
BbsI	GAAGAC	3 cut(s)	906, 961, 1246
Bbv12I	GWGCWC	1 cut(s)	1361
BbvCI	CCTCAGC	2 cut(s)	39, 522
BbvI	GCAGC	5 cut(s)	170, 231, 288, 332, 490
BccI	CCATC	4 cut(s)	356, 742, 1337, 1574
BceAI	ACGGC	2 cut(s)	44, 171
BciT130I	CCWGG	5 cut(s)	179, 595, 647, 1413, 1778
BciVI	GTATCC	1 cut(s)	378
BcoDI	GTCTC	7 cut(s)	325, 755, 882, 1527, 1555, 1778, 1857
BfaI	CTAG	4 cut(s)	458, 1118, 1127, 1890
BfmI	CTRYAG	3 cut(s)	416, 639, 1029
BfoI	RGCGCY	1 cut(s)	456
BfrI	CTTAAG	1 cut(s)	1702
BfuI	GTATCC	1 cut(s)	378
BisI	GCNGC	6 cut(s)	105, 184, 245, 277, 321, 504
BlpI	GCTNAGC	1 cut(s)	579
BlsI	GCNGC	6 cut(s)	106, 185, 246, 278, 322, 505
BmcAI	AGTACT	1 cut(s)	815
Bme1390I	CCNGG	5 cut(s)	179, 595, 647, 1413, 1778
Bme18I	GGWCC	3 cut(s)	1366, 1780, 1822
BmeT110I	CYCGRG	1 cut(s)	1068
BmgT120I	GGNCC	5 cut(s)	175, 526, 1366, 1780, 1822
BmiI	GGNNCC	5 cut(s)	454, 1368, 1902, 1934, 1956
BmrFI	CCNGG	5 cut(s)	179, 595, 647, 1413, 1778
BmsI	GCATC	4 cut(s)	346, 700, 970, 1015
BmtI	GCTAGC	1 cut(s)	1130
BoxI	GACNNNNGTC	1 cut(s)	153
BpiI	GAAGAC	3 cut(s)	906, 961, 1246
BpmI	CTGGAG	2 cut(s)	1760, 2016
Bpu10I	CCTNAGC	3 cut(s)	39, 324, 522
Bpu1102I	GCTNAGC	1 cut(s)	579
BpuEI	CTTGAG	6 cut(s)	551, 642, 772, 1165, 1323, 1864
BsaAI	YACGTR	1 cut(s)	626
BsaHI	GRCGYC	1 cut(s)	453
BsaI	GGTCTC	1 cut(s)	755
BsaJI	CCNNGG	9 cut(s)	177, 178, 594, 795, 1204, 1412, 1894, 1928, 1966
Bsc4I	CCNNNNNNNGG	2 cut(s)	66, 193
Bse118I	RCCGGY	1 cut(s)	506
Bse1I	ACTGG	1 cut(s)	1503
Bse3DI	GCAATG	3 cut(s)	1717, 2032, 2103
BseBI	CCWGG	5 cut(s)	179, 595, 647, 1413, 1778
BseDI	CCNNGG	9 cut(s)	177, 178, 594, 795, 1204, 1412, 1894, 1928, 1966
BseGI	GGATG	1 cut(s)	839
BseLI	CCNNNNNNNGG	2 cut(s)	66, 193
BseMI	GCAATG	3 cut(s)	1717, 2032, 2103
BseMII	CTCAG	8 cut(s)	30, 165, 284, 338, 513, 893, 1353, 1543
BseNI	ACTGG	1 cut(s)	1503
BsePI	GCGCGC	1 cut(s)	1130
BseRI	GAGGAG	3 cut(s)	858, 887, 1896
BseXI	GCAGC	5 cut(s)	170, 231, 288, 332, 490
Bsh1236I	CGCG	2 cut(s)	72, 1132
BshFI	GGCC	2 cut(s)	176, 527
BshNI	GGYRCC	1 cut(s)	452
BsiHKAI	GWGCWC	1 cut(s)	1361
BsiHKCI	CYCGRG	1 cut(s)	1068
BsiSI	CCGG	1 cut(s)	507
BsiWI	CGTACG	1 cut(s)	626
BslFI	GGGAC	2 cut(s)	3, 302
BslI	CCNNNNNNNGG	2 cut(s)	66, 193
BsmAI	GTCTC	7 cut(s)	325, 755, 882, 1527, 1555, 1778, 1857
BsmBI	CGTCTC	1 cut(s)	1857
BsmFI	GGGAC	2 cut(s)	3, 302
BsmI	GAATGC	1 cut(s)	1438
BsnI	GGCC	2 cut(s)	176, 527
Bso31I	GGTCTC	1 cut(s)	755
BsoBI	CYCGRG	1 cut(s)	1068
Bsp1286I	GDGCHC	1 cut(s)	1361
Bsp143I	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
Bsp1720I	GCTNAGC	1 cut(s)	579
Bsp19I	CCATGG	2 cut(s)	1894, 1966
BspACI	CCGC	3 cut(s)	105, 279, 1755
BspANI	GGCC	2 cut(s)	176, 527
BspCNI	CTCAG	8 cut(s)	31, 164, 283, 337, 514, 892, 1354, 1542
BspFNI	CGCG	2 cut(s)	72, 1132
BspLI	GGNNCC	5 cut(s)	454, 1368, 1902, 1934, 1956
BspOI	GCTAGC	1 cut(s)	1130
BspPI	GGATC	6 cut(s)	1021, 1509, 1606, 1737, 1949, 1962
BspQI	GCTCTTC	2 cut(s)	260, 381
BspT107I	GGYRCC	1 cut(s)	452
BspTI	CTTAAG	1 cut(s)	1702
BspTNI	GGTCTC	1 cut(s)	755
BsrDI	GCAATG	3 cut(s)	1717, 2032, 2103
BsrFI	RCCGGY	1 cut(s)	506
BsrI	ACTGG	1 cut(s)	1503
BssAI	RCCGGY	1 cut(s)	506
BssECI	CCNNGG	9 cut(s)	177, 178, 594, 795, 1204, 1412, 1894, 1928, 1966
BssHII	GCGCGC	1 cut(s)	1130
BssMI	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
BssNI	GRCGYC	1 cut(s)	453
BssT1I	CCWWGG	5 cut(s)	795, 1204, 1894, 1928, 1966
Bst2UI	CCWGG	5 cut(s)	179, 595, 647, 1413, 1778
Bst4CI	ACNGT	5 cut(s)	575, 824, 1647, 1919, 2022
Bst6I	CTCTTC	5 cut(s)	260, 381, 753, 999, 1462
BstACI	GRCGYC	1 cut(s)	453
BstAFI	CTTAAG	1 cut(s)	1702
BstBAI	YACGTR	1 cut(s)	626
BstC8I	GCNNGC	3 cut(s)	1128, 1132, 1992
BstDSI	CCRYGG	2 cut(s)	1894, 1966
BstF5I	GGATG	1 cut(s)	839
BstFNI	CGCG	2 cut(s)	72, 1132
BstH2I	RGCGCY	1 cut(s)	456
BstHHI	GCGC	4 cut(s)	72, 455, 1132, 1134
BstKTI	GATC	6 cut(s)	1016, 1233, 1504, 1614, 1732, 1957
BstMAI	GTCTC	7 cut(s)	325, 755, 882, 1527, 1555, 1778, 1857
BstMBI	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
BstMWI	GCNNNNNNNGC	2 cut(s)	44, 250
BstNI	CCWGG	5 cut(s)	179, 595, 647, 1413, 1778
BstNSI	RCATGY	2 cut(s)	346, 1349
BstPAI	GACNNNNGTC	1 cut(s)	153
BstSCI	CCNGG	5 cut(s)	177, 593, 645, 1411, 1776
BstSFI	CTRYAG	3 cut(s)	416, 639, 1029
BstSNI	TACGTA	1 cut(s)	626
BstUI	CGCG	2 cut(s)	72, 1132
BstV1I	GCAGC	5 cut(s)	170, 231, 288, 332, 490
BstV2I	GAAGAC	3 cut(s)	906, 961, 1246
BstX2I	RGATCY	2 cut(s)	1729, 1954
BstYI	RGATCY	2 cut(s)	1729, 1954
BsuI	GTATCC	1 cut(s)	378
BsuRI	GGCC	2 cut(s)	176, 527
BtgI	CCRYGG	2 cut(s)	1894, 1966
BtsCI	GGATG	1 cut(s)	839
BtsIMutI	CAGTG	6 cut(s)	975, 1023, 1643, 1915, 2027, 2139
Cac8I	GCNNGC	3 cut(s)	1128, 1132, 1992
CfoI	GCGC	4 cut(s)	72, 455, 1132, 1134
Cfr10I	RCCGGY	1 cut(s)	506
Cfr13I	GGNCC	5 cut(s)	175, 526, 1366, 1780, 1822
Csp6I	GTAC	5 cut(s)	189, 627, 814, 1563, 2154
CviQI	GTAC	5 cut(s)	189, 627, 814, 1563, 2154
DinI	GGCGCC	1 cut(s)	454
DpnI	GATC	6 cut(s)	1015, 1232, 1503, 1613, 1731, 1956
DpnII	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
DraI	TTTAAA	1 cut(s)	1725
DraIII	CACNNNGTG	1 cut(s)	869
Eam1104I	CTCTTC	5 cut(s)	260, 381, 753, 999, 1462
EarI	CTCTTC	5 cut(s)	260, 381, 753, 999, 1462
Ecl136II	GAGCTC	1 cut(s)	1359
Eco105I	TACGTA	1 cut(s)	626
Eco130I	CCWWGG	5 cut(s)	795, 1204, 1894, 1928, 1966
Eco24I	GRGCYC	1 cut(s)	1361
Eco31I	GGTCTC	1 cut(s)	755
Eco47I	GGWCC	3 cut(s)	1366, 1780, 1822
Eco53kI	GAGCTC	1 cut(s)	1359
Eco57I	CTGAAG	5 cut(s)	233, 951, 1562, 1718, 1802
Eco88I	CYCGRG	1 cut(s)	1068
EcoICRI	GAGCTC	1 cut(s)	1359
EcoO109I	RGGNCCY	4 cut(s)	526, 1366, 1780, 1822
EcoRII	CCWGG	5 cut(s)	177, 593, 645, 1411, 1776
EcoT14I	CCWWGG	5 cut(s)	795, 1204, 1894, 1928, 1966
EcoT38I	GRGCYC	1 cut(s)	1361
EgeI	GGCGCC	1 cut(s)	454
EheI	GGCGCC	1 cut(s)	454
ErhI	CCWWGG	5 cut(s)	795, 1204, 1894, 1928, 1966
Esp3I	CGTCTC	1 cut(s)	1857
FaqI	GGGAC	2 cut(s)	3, 302
FauNDI	CATATG	2 cut(s)	55, 1583
Fnu4HI	GCNGC	6 cut(s)	105, 184, 245, 277, 321, 504
FokI	GGATG	1 cut(s)	846
FriOI	GRGCYC	1 cut(s)	1361
Fsp4HI	GCNGC	6 cut(s)	105, 184, 245, 277, 321, 504
FspBI	CTAG	4 cut(s)	458, 1118, 1127, 1890
GlaI	GCGC	4 cut(s)	71, 454, 1131, 1133
GluI	GCNGC	6 cut(s)	105, 184, 245, 277, 321, 504
GsuI	CTGGAG	2 cut(s)	1760, 2016
HaeII	RGCGCY	1 cut(s)	456
HaeIII	GGCC	2 cut(s)	176, 527
HapII	CCGG	1 cut(s)	507
HhaI	GCGC	4 cut(s)	72, 455, 1132, 1134
Hin1I	GRCGYC	1 cut(s)	453
Hin6I	GCGC	4 cut(s)	70, 453, 1130, 1132
HinP1I	GCGC	4 cut(s)	70, 453, 1130, 1132
HincII	GTYRAC	3 cut(s)	118, 486, 784
HindII	GTYRAC	3 cut(s)	118, 486, 784
HindIII	AAGCTT	1 cut(s)	581
HpaI	GTTAAC	1 cut(s)	118
HpaII	CCGG	1 cut(s)	507
HphI	GGTGA	8 cut(s)	310, 340, 1132, 1208, 1277, 1688, 1730, 1856
Hpy166II	GTNNAC	5 cut(s)	118, 413, 486, 784, 973
Hpy188III	TCNNGA	8 cut(s)	399, 659, 1068, 1234, 1540, 1570, 1820, 1945
Hpy8I	GTNNAC	5 cut(s)	118, 413, 486, 784, 973
Hpy99I	CGWCG	1 cut(s)	15
HpyCH4III	ACNGT	5 cut(s)	575, 824, 1647, 1919, 2022
HpyCH4IV	ACGT	2 cut(s)	625, 804
HpyF10VI	GCNNNNNNNGC	2 cut(s)	44, 250
HpySE526I	ACGT	2 cut(s)	625, 804
Hsp92I	GRCGYC	1 cut(s)	453
HspAI	GCGC	4 cut(s)	70, 453, 1130, 1132
KasI	GGCGCC	1 cut(s)	452
KspAI	GTTAAC	1 cut(s)	118
Kzo9I	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
LguI	GCTCTTC	2 cut(s)	260, 381
LmnI	GCTCC	3 cut(s)	599, 845, 1196
Lsp1109I	GCAGC	5 cut(s)	170, 231, 288, 332, 490
LweI	GCATC	4 cut(s)	346, 700, 970, 1015
MaeI	CTAG	4 cut(s)	458, 1118, 1127, 1890
MaeII	ACGT	2 cut(s)	625, 804
MaeIII	GTNAC	7 cut(s)	298, 668, 1039, 1214, 1348, 1885, 2003
MalI	GATC	6 cut(s)	1015, 1232, 1503, 1613, 1731, 1956
MboI	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
MflI	RGATCY	2 cut(s)	1729, 1954
MhlI	GDGCHC	1 cut(s)	1361
Mly113I	GGCGCC	1 cut(s)	453
MlyI	GAGTC	4 cut(s)	25, 143, 884, 968
MmeI	TCCRAC	6 cut(s)	171, 710, 931, 1625, 1811, 1840
MslI	CAYNNNNRTG	2 cut(s)	1096, 1098
MspA1I	CMGCKG	2 cut(s)	279, 1755
MspCI	CTTAAG	1 cut(s)	1702
MspI	CCGG	1 cut(s)	507
MspR9I	CCNGG	5 cut(s)	179, 595, 647, 1413, 1778
Mva1269I	GAATGC	1 cut(s)	1438
MvaI	CCWGG	5 cut(s)	179, 595, 647, 1413, 1778
MvnI	CGCG	2 cut(s)	72, 1132
MwoI	GCNNNNNNNGC	2 cut(s)	44, 250
NarI	GGCGCC	1 cut(s)	453
NcoI	CCATGG	2 cut(s)	1894, 1966
NdeI	CATATG	2 cut(s)	55, 1583
NdeII	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
NheI	GCTAGC	1 cut(s)	1126
NlaIV	GGNNCC	5 cut(s)	454, 1368, 1902, 1934, 1956
NmeAIII	GCCGAG	1 cut(s)	133
NmuCI	GTSAC	4 cut(s)	298, 1214, 1885, 2003
NspI	RCATGY	2 cut(s)	346, 1349
OliI	CACNNNNGTG	1 cut(s)	1096
PaeR7I	CTCGAG	1 cut(s)	1068
PasI	CCCWGGG	1 cut(s)	178
PauI	GCGCGC	1 cut(s)	1130
PciI	ACATGT	2 cut(s)	342, 1345
PciSI	GCTCTTC	2 cut(s)	260, 381
PcsI	WCGNNNNNNNCGW	2 cut(s)	105, 404
PctI	GAATGC	1 cut(s)	1438
Pfl23II	CGTACG	1 cut(s)	626
PfoI	TCCNGGA	1 cut(s)	1776
PkrI	GCNGC	6 cut(s)	106, 185, 246, 278, 322, 505
PleI	GAGTC	4 cut(s)	24, 143, 883, 968
PluTI	GGCGCC	1 cut(s)	456
PpsI	GAGTC	4 cut(s)	24, 143, 883, 968
Ppu21I	YACGTR	1 cut(s)	626
PpuMI	RGGWCCY	3 cut(s)	1366, 1780, 1822
PscI	ACATGT	2 cut(s)	342, 1345
PshAI	GACNNNNGTC	1 cut(s)	153
PshBI	ATTAAT	1 cut(s)	705
Psp124BI	GAGCTC	1 cut(s)	1361
Psp1406I	AACGTT	1 cut(s)	804
Psp5II	RGGWCCY	3 cut(s)	1366, 1780, 1822
Psp6I	CCWGG	5 cut(s)	177, 593, 645, 1411, 1776
PspGI	CCWGG	5 cut(s)	177, 593, 645, 1411, 1776
PspLI	CGTACG	1 cut(s)	626
PspN4I	GGNNCC	5 cut(s)	454, 1368, 1902, 1934, 1956
PspPI	GGNCC	5 cut(s)	175, 526, 1366, 1780, 1822
PspPPI	RGGWCCY	3 cut(s)	1366, 1780, 1822
PsuI	RGATCY	2 cut(s)	1729, 1954
PteI	GCGCGC	1 cut(s)	1130
RsaI	GTAC	5 cut(s)	190, 628, 815, 1564, 2155
RsaNI	GTAC	5 cut(s)	189, 627, 814, 1563, 2154
RseI	CAYNNNNRTG	2 cut(s)	1096, 1098
SacI	GAGCTC	1 cut(s)	1361
SapI	GCTCTTC	2 cut(s)	260, 381
SatI	GCNGC	6 cut(s)	105, 184, 245, 277, 321, 504
Sau3AI	GATC	6 cut(s)	1013, 1230, 1501, 1611, 1729, 1954
Sau96I	GGNCC	5 cut(s)	175, 526, 1366, 1780, 1822
ScaI	AGTACT	1 cut(s)	815
SchI	GAGTC	4 cut(s)	25, 143, 884, 968
ScrFI	CCNGG	5 cut(s)	179, 595, 647, 1413, 1778
SduI	GDGCHC	1 cut(s)	1361
SfaNI	GCATC	4 cut(s)	346, 700, 970, 1015
SfcI	CTRYAG	3 cut(s)	416, 639, 1029
SfoI	GGCGCC	1 cut(s)	454
Sfr274I	CTCGAG	1 cut(s)	1068
SinI	GGWCC	3 cut(s)	1366, 1780, 1822
SlaI	CTCGAG	1 cut(s)	1068
SmiMI	CAYNNNNRTG	2 cut(s)	1096, 1098
SmlI	CTYRAG	8 cut(s)	530, 657, 787, 1068, 1144, 1338, 1702, 1879
SmoI	CTYRAG	8 cut(s)	530, 657, 787, 1068, 1144, 1338, 1702, 1879
SnaBI	TACGTA	1 cut(s)	626
SsiI	CCGC	3 cut(s)	105, 279, 1755
SspDI	GGCGCC	1 cut(s)	452
SspI	AATATT	1 cut(s)	1255
SspMI	CTAG	4 cut(s)	458, 1118, 1127, 1890
SstI	GAGCTC	1 cut(s)	1361
StyD4I	CCNGG	5 cut(s)	177, 593, 645, 1411, 1776
StyI	CCWWGG	5 cut(s)	795, 1204, 1894, 1928, 1966
TaaI	ACNGT	5 cut(s)	575, 824, 1647, 1919, 2022
TaiI	ACGT	2 cut(s)	628, 807
TaqI	TCGA	4 cut(s)	398, 1069, 1332, 1569
TaqII	GACCGA	1 cut(s)	1258
TatI	WGTACW	1 cut(s)	813
TauI	GCSGC	1 cut(s)	107
TscAI	CASTG	6 cut(s)	975, 1023, 1650, 1922, 2027, 2146
TseFI	GTSAC	4 cut(s)	298, 1214, 1885, 2003
TseI	GCWGC	5 cut(s)	183, 244, 276, 320, 503
Tsp45I	GTSAC	4 cut(s)	298, 1214, 1885, 2003
TspDTI	ATGAA	6 cut(s)	42, 368, 485, 771, 2025, 2082
TspGWI	ACGGA	2 cut(s)	115, 1607
TspRI	CASTG	6 cut(s)	975, 1023, 1650, 1922, 2027, 2146
Vha464I	CTTAAG	1 cut(s)	1702
VpaK11BI	GGWCC	3 cut(s)	1366, 1780, 1822
VspI	ATTAAT	1 cut(s)	705
XapI	RAATTY	5 cut(s)	205, 367, 1112, 1484, 1625
XceI	RCATGY	2 cut(s)	346, 1349
XhoI	CTCGAG	1 cut(s)	1068
XspI	CTAG	4 cut(s)	458, 1118, 1127, 1890
ZrmI	AGTACT	1 cut(s)	815

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.