OST-HTH/LOTUS domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 75 - 148 | 9.4e-07 | Ankyrin repeats (3 copies) |
| Ank_2 | PF12796 | 315 - 384 | 3.8e-06 | Ankyrin repeats (3 copies) |
| Ank_4 | PF13637 | 368 - 408 | 4.6e-06 | Ankyrin repeats (many copies) |
| Ank_2 | PF12796 | 369 - 447 | 7.9e-11 | Ankyrin repeats (3 copies) |
| RRM_1 | PF00076 | 561 - 632 | 1e-11 | RNA recognition motif |
| OST-HTH | PF12872 | 715 - 777 | 8.1e-08 | OST-HTH/LOTUS domain |
| zf-C3HC4_3 | PF13920 | 1028 - 1079 | 8.9e-06 | Zinc finger, C3HC4 type (RING finger) |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 3 cut(s) | 75, 770, 3063 |
| AccB1I | GGYRCC | 2 cut(s) | 110, 1133 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3015 |
| AccBSI | CCGCTC | 1 cut(s) | 337 |
| AccII | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| AcoI | YGGCCR | 3 cut(s) | 793, 819, 2378 |
| AcsI | RAATTY | 5 cut(s) | 1048, 1107, 2243, 2384, 3041 |
| AcuI | CTGAAG | 7 cut(s) | 881, 1689, 1833, 2218, 2510, 2615, 2657 |
| AcyI | GRCGYC | 2 cut(s) | 251, 386 |
| AdeI | CACNNNGTG | 1 cut(s) | 1604 |
| AfaI | GTAC | 8 cut(s) | 439, 799, 1471, 1550, 2323, 2829, 3228, 3246 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 247, 732, 1225, 2045, 2792, 2793, 3015 |
| AflIII | ACRYGT | 1 cut(s) | 396 |
| AhlI | ACTAGT | 1 cut(s) | 3257 |
| AjiI | CACGTC | 4 cut(s) | 232, 622, 1329, 2902 |
| AjnI | CCWGG | 3 cut(s) | 786, 1380, 2170 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1221, 1253, 1731, 1763 |
| AleI | CACNNNNGTG | 1 cut(s) | 561 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 518, 550 |
| Alw21I | GWGCWC | 5 cut(s) | 39, 581, 2120, 2841, 3155 |
| Alw26I | GTCTC | 5 cut(s) | 146, 975, 1620, 2445, 2909 |
| Alw44I | GTGCAC | 2 cut(s) | 2837, 3151 |
| Ama87I | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| AoxI | GGCC | 7 cut(s) | 189, 646, 793, 819, 2378, 2393, 3120 |
| ApaLI | GTGCAC | 2 cut(s) | 2837, 3151 |
| ApeKI | GCWGC | 9 cut(s) | 273, 373, 670, 924, 968, 1000, 1184, 1658, 2654 |
| ApoI | RAATTY | 5 cut(s) | 1048, 1107, 2243, 2384, 3041 |
| AseI | ATTAAT | 1 cut(s) | 1440 |
| Asp700I | GAANNNNTTC | 4 cut(s) | 347, 530, 894, 2306 |
| AspLEI | GCGC | 6 cut(s) | 92, 299, 307, 670, 830, 1867 |
| AsuII | TTCGAA | 1 cut(s) | 2537 |
| AsuNHI | GCTAGC | 1 cut(s) | 472 |
| AvaI | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| AxyI | CCTNAGG | 1 cut(s) | 446 |
| BaeGI | GKGCMC | 3 cut(s) | 1138, 2841, 3155 |
| BamHI | GGATCC | 3 cut(s) | 1065, 2125, 2974 |
| BanI | GGYRCC | 2 cut(s) | 110, 1133 |
| BanII | GRGCYC | 2 cut(s) | 39, 2120 |
| BauI | CACGAG | 1 cut(s) | 338 |
| BbsI | GAAGAC | 7 cut(s) | 549, 1016, 1236, 1500, 2208, 2516, 2621 |
| Bbv12I | GWGCWC | 5 cut(s) | 39, 581, 2120, 2841, 3155 |
| BbvI | GCAGC | 9 cut(s) | 260, 360, 657, 936, 980, 987, 1171, 1645, 2641 |
| BccI | CCATC | 4 cut(s) | 499, 545, 1037, 2348 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 244, 278 |
| BciT130I | CCWGG | 3 cut(s) | 788, 1382, 2172 |
| BciVI | GTATCC | 1 cut(s) | 2808 |
| BclI | TGATCA | 2 cut(s) | 162, 1126 |
| BcoDI | GTCTC | 5 cut(s) | 146, 975, 1620, 2445, 2909 |
| BcuI | ACTAGT | 1 cut(s) | 3257 |
| BfaI | CTAG | 4 cut(s) | 473, 2391, 2766, 3258 |
| BfmI | CTRYAG | 3 cut(s) | 1374, 1767, 2814 |
| BfoI | RGCGCY | 2 cut(s) | 93, 671 |
| BfuI | GTATCC | 1 cut(s) | 2808 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 836 |
| BlpI | GCTNAGC | 1 cut(s) | 1314 |
| BmcAI | AGTACT | 2 cut(s) | 1550, 3246 |
| Bme1390I | CCNGG | 3 cut(s) | 788, 1382, 2172 |
| BmeT110I | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| BmgBI | CACGTC | 4 cut(s) | 232, 622, 1329, 2902 |
| BmiI | GGNNCC | 7 cut(s) | 112, 736, 1067, 1135, 2127, 2849, 2976 |
| BmrFI | CCNGG | 3 cut(s) | 788, 1382, 2172 |
| BmrI | ACTGGG | 1 cut(s) | 1229 |
| BmsI | GCATC | 6 cut(s) | 136, 1021, 1570, 1753, 2995, 3102 |
| BmtI | GCTAGC | 1 cut(s) | 476 |
| BmuI | ACTGGG | 1 cut(s) | 1229 |
| BoxI | GACNNNNGTC | 1 cut(s) | 1644 |
| BpiI | GAAGAC | 7 cut(s) | 549, 1016, 1236, 1500, 2208, 2516, 2621 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 284, 316, 2771, 2803 |
| BpmI | CTGGAG | 2 cut(s) | 500, 2931 |
| Bpu10I | CCTNAGC | 1 cut(s) | 972 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1314 |
| Bpu14I | TTCGAA | 1 cut(s) | 2537 |
| BpuEI | CTTGAG | 7 cut(s) | 407, 1232, 1377, 1507, 2088, 2479, 2740 |
| BsaHI | GRCGYC | 2 cut(s) | 251, 386 |
| BsaWI | WCCGGW | 1 cut(s) | 1641 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 518, 548, 767, 797, 2391, 2421, 2990, 3020 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 247, 732, 1225, 2045, 2792, 2793, 3015 |
| Bse118I | RCCGGY | 3 cut(s) | 92, 221, 1187 |
| Bse1I | ACTGG | 4 cut(s) | 483, 1235, 2081, 2262 |
| Bse21I | CCTNAGG | 1 cut(s) | 446 |
| Bse3DI | GCAATG | 1 cut(s) | 2740 |
| BseBI | CCWGG | 3 cut(s) | 788, 1382, 2172 |
| BseGI | GGATG | 3 cut(s) | 510, 960, 1574 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 247, 732, 1225, 2045, 2792, 2793, 3015 |
| BseMI | GCAATG | 1 cut(s) | 2740 |
| BseMII | CTCAG | 9 cut(s) | 218, 437, 584, 932, 986, 1305, 1926, 2112, 2302 |
| BseNI | ACTGG | 4 cut(s) | 483, 1235, 2081, 2262 |
| BseRI | GAGGAG | 9 cut(s) | 37, 877, 993, 1593, 1622, 1625, 1757, 1850, 2779 |
| BseSI | GKGCMC | 3 cut(s) | 1138, 2841, 3155 |
| BseX3I | CGGCCG | 1 cut(s) | 793 |
| BseXI | GCAGC | 9 cut(s) | 260, 360, 657, 936, 980, 987, 1171, 1645, 2641 |
| BsgI | GTGCAG | 6 cut(s) | 248, 359, 987, 2433, 2959, 2964 |
| Bsh1236I | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| Bsh1285I | CGRYCG | 2 cut(s) | 144, 796 |
| BshFI | GGCC | 7 cut(s) | 191, 648, 795, 821, 2380, 2395, 3122 |
| BshNI | GGYRCC | 2 cut(s) | 110, 1133 |
| BsiEI | CGRYCG | 2 cut(s) | 144, 796 |
| BsiHKAI | GWGCWC | 5 cut(s) | 39, 581, 2120, 2841, 3155 |
| BsiHKCI | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| BsiSI | CCGG | 5 cut(s) | 93, 222, 1188, 1642, 2377 |
| BsiWI | CGTACG | 1 cut(s) | 437 |
| BslFI | GGGAC | 7 cut(s) | 340, 748, 769, 950, 1077, 2946, 2986 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 247, 732, 1225, 2045, 2792, 2793, 3015 |
| BsmAI | GTCTC | 5 cut(s) | 146, 975, 1620, 2445, 2909 |
| BsmBI | CGTCTC | 2 cut(s) | 146, 975 |
| BsmFI | GGGAC | 7 cut(s) | 340, 748, 769, 950, 1077, 2946, 2986 |
| BsmI | GAATGC | 1 cut(s) | 2197 |
| BsnI | GGCC | 7 cut(s) | 191, 648, 795, 821, 2380, 2395, 3122 |
| BsoBI | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| Bsp119I | TTCGAA | 1 cut(s) | 2537 |
| Bsp1286I | GDGCHC | 6 cut(s) | 39, 581, 1138, 2120, 2841, 3155 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1314 |
| Bsp19I | CCATGG | 1 cut(s) | 2770 |
| BspANI | GGCC | 7 cut(s) | 191, 648, 795, 821, 2380, 2395, 3122 |
| BspCNI | CTCAG | 9 cut(s) | 217, 438, 585, 931, 985, 1306, 1927, 2113, 2301 |
| BspFNI | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| BspLI | GGNNCC | 7 cut(s) | 112, 736, 1067, 1135, 2127, 2849, 2976 |
| BspMAI | CTGCAG | 1 cut(s) | 2818 |
| BspOI | GCTAGC | 1 cut(s) | 476 |
| BspQI | GCTCTTC | 3 cut(s) | 44, 908, 1062 |
| BspT104I | TTCGAA | 1 cut(s) | 2537 |
| BspT107I | GGYRCC | 2 cut(s) | 110, 1133 |
| BsrBI | CCGCTC | 1 cut(s) | 337 |
| BsrDI | GCAATG | 1 cut(s) | 2740 |
| BsrFI | RCCGGY | 3 cut(s) | 92, 221, 1187 |
| BsrI | ACTGG | 4 cut(s) | 483, 1235, 2081, 2262 |
| BssAI | RCCGGY | 3 cut(s) | 92, 221, 1187 |
| BssNI | GRCGYC | 2 cut(s) | 251, 386 |
| BssSI | CACGAG | 1 cut(s) | 338 |
| BssT1I | CCWWGG | 6 cut(s) | 453, 606, 738, 1530, 2071, 2770 |
| Bst2BI | CACGAG | 1 cut(s) | 338 |
| Bst2UI | CCWGG | 3 cut(s) | 788, 1382, 2172 |
| Bst4CI | ACNGT | 7 cut(s) | 131, 331, 461, 583, 1429, 2326, 2937 |
| Bst6I | CTCTTC | 5 cut(s) | 44, 206, 908, 1062, 1734 |
| BstACI | GRCGYC | 2 cut(s) | 251, 386 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 3112 |
| BstBI | TTCGAA | 1 cut(s) | 2537 |
| BstC8I | GCNNGC | 8 cut(s) | 219, 223, 474, 1863, 2907, 3097, 3171, 3209 |
| BstDSI | CCRYGG | 3 cut(s) | 114, 834, 2770 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2043 |
| BstF5I | GGATG | 3 cut(s) | 510, 960, 1574 |
| BstFNI | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| BstH2I | RGCGCY | 2 cut(s) | 93, 671 |
| BstHHI | GCGC | 6 cut(s) | 92, 299, 307, 670, 830, 1867 |
| BstMAI | GTCTC | 5 cut(s) | 146, 975, 1620, 2445, 2909 |
| BstMCI | CGRYCG | 2 cut(s) | 144, 796 |
| BstNI | CCWGG | 3 cut(s) | 788, 1382, 2172 |
| BstNSI | RCATGY | 1 cut(s) | 3099 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 1644 |
| BstSCI | CCNGG | 3 cut(s) | 786, 1380, 2170 |
| BstSFI | CTRYAG | 3 cut(s) | 1374, 1767, 2814 |
| BstSLI | GKGCMC | 3 cut(s) | 1138, 2841, 3155 |
| BstUI | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| BstV1I | GCAGC | 9 cut(s) | 260, 360, 657, 936, 980, 987, 1171, 1645, 2641 |
| BstV2I | GAAGAC | 7 cut(s) | 549, 1016, 1236, 1500, 2208, 2516, 2621 |
| BstX2I | RGATCY | 6 cut(s) | 4, 508, 1065, 2125, 2869, 2974 |
| BstYI | RGATCY | 6 cut(s) | 4, 508, 1065, 2125, 2869, 2974 |
| BstZI | CGGCCG | 1 cut(s) | 793 |
| Bsu36I | CCTNAGG | 1 cut(s) | 446 |
| BsuI | GTATCC | 1 cut(s) | 2808 |
| BsuRI | GGCC | 7 cut(s) | 191, 648, 795, 821, 2380, 2395, 3122 |
| BtgI | CCRYGG | 3 cut(s) | 114, 834, 2770 |
| BtrI | CACGTC | 4 cut(s) | 232, 622, 1329, 2902 |
| BtsCI | GGATG | 3 cut(s) | 510, 960, 1574 |
| BtsI | GCAGTG | 3 cut(s) | 2450, 2578, 2947 |
| Cac8I | GCNNGC | 8 cut(s) | 219, 223, 474, 1863, 2907, 3097, 3171, 3209 |
| CfoI | GCGC | 6 cut(s) | 92, 299, 307, 670, 830, 1867 |
| Cfr10I | RCCGGY | 3 cut(s) | 92, 221, 1187 |
| Cfr42I | CCGCGG | 1 cut(s) | 117 |
| CpoI | CGGWCCG | 1 cut(s) | 127 |
| CseI | GACGC | 5 cut(s) | 18, 240, 375, 387, 1046 |
| Csp6I | GTAC | 8 cut(s) | 438, 798, 1470, 1549, 2322, 2828, 3227, 3245 |
| CspI | CGGWCCG | 1 cut(s) | 127 |
| CviAII | CATG | 7 cut(s) | 559, 1130, 1879, 2142, 2368, 2771, 3096 |
| CviQI | GTAC | 8 cut(s) | 438, 798, 1470, 1549, 2322, 2828, 3227, 3245 |
| DraIII | CACNNNGTG | 1 cut(s) | 1604 |
| EaeI | YGGCCR | 3 cut(s) | 793, 819, 2378 |
| EagI | CGGCCG | 1 cut(s) | 793 |
| Eam1104I | CTCTTC | 5 cut(s) | 44, 206, 908, 1062, 1734 |
| EarI | CTCTTC | 5 cut(s) | 44, 206, 908, 1062, 1734 |
| EciI | GGCGGA | 1 cut(s) | 305 |
| Ecl136II | GAGCTC | 2 cut(s) | 37, 2118 |
| EclXI | CGGCCG | 1 cut(s) | 793 |
| Eco130I | CCWWGG | 6 cut(s) | 453, 606, 738, 1530, 2071, 2770 |
| Eco147I | AGGCCT | 1 cut(s) | 2395 |
| Eco24I | GRGCYC | 2 cut(s) | 39, 2120 |
| Eco52I | CGGCCG | 1 cut(s) | 793 |
| Eco53kI | GAGCTC | 2 cut(s) | 37, 2118 |
| Eco57I | CTGAAG | 7 cut(s) | 881, 1689, 1833, 2218, 2510, 2615, 2657 |
| Eco81I | CCTNAGG | 1 cut(s) | 446 |
| Eco88I | CYCGRG | 5 cut(s) | 323, 358, 1137, 1806, 2842 |
| EcoICRI | GAGCTC | 2 cut(s) | 37, 2118 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2043 |
| EcoO109I | RGGNCCY | 5 cut(s) | 1216, 2551, 2635, 2677, 2719 |
| EcoRII | CCWGG | 3 cut(s) | 786, 1380, 2170 |
| EcoT14I | CCWWGG | 6 cut(s) | 453, 606, 738, 1530, 2071, 2770 |
| EcoT38I | GRGCYC | 2 cut(s) | 39, 2120 |
| ErhI | CCWWGG | 6 cut(s) | 453, 606, 738, 1530, 2071, 2770 |
| Esp3I | CGTCTC | 2 cut(s) | 146, 975 |
| FaeI | CATG | 7 cut(s) | 562, 1133, 1882, 2145, 2371, 2774, 3099 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 763, 795 |
| FaqI | GGGAC | 7 cut(s) | 340, 748, 769, 950, 1077, 2946, 2986 |
| FatI | CATG | 7 cut(s) | 558, 1129, 1878, 2141, 2367, 2770, 3095 |
| FauI | CCCGC | 1 cut(s) | 3162 |
| FbaI | TGATCA | 2 cut(s) | 162, 1126 |
| FokI | GGATG | 3 cut(s) | 517, 947, 1581 |
| FriOI | GRGCYC | 2 cut(s) | 39, 2120 |
| FspBI | CTAG | 4 cut(s) | 473, 2391, 2766, 3258 |
| GlaI | GCGC | 6 cut(s) | 91, 298, 306, 669, 829, 1866 |
| GsuI | CTGGAG | 2 cut(s) | 500, 2931 |
| HaeII | RGCGCY | 2 cut(s) | 93, 671 |
| HaeIII | GGCC | 7 cut(s) | 191, 648, 795, 821, 2380, 2395, 3122 |
| HapII | CCGG | 5 cut(s) | 93, 222, 1188, 1642, 2377 |
| HgaI | GACGC | 5 cut(s) | 18, 240, 375, 387, 1046 |
| HhaI | GCGC | 6 cut(s) | 92, 299, 307, 670, 830, 1867 |
| Hin1I | GRCGYC | 2 cut(s) | 251, 386 |
| Hin1II | CATG | 7 cut(s) | 562, 1133, 1882, 2145, 2371, 2774, 3099 |
| Hin6I | GCGC | 6 cut(s) | 90, 297, 305, 668, 828, 1865 |
| HinP1I | GCGC | 6 cut(s) | 90, 297, 305, 668, 828, 1865 |
| HincII | GTYRAC | 5 cut(s) | 697, 1167, 1485, 1519, 2563 |
| HindII | GTYRAC | 5 cut(s) | 697, 1167, 1485, 1519, 2563 |
| HindIII | AAGCTT | 1 cut(s) | 19 |
| HpaI | GTTAAC | 4 cut(s) | 697, 1167, 1519, 2563 |
| HpaII | CCGG | 5 cut(s) | 93, 222, 1188, 1642, 2377 |
| Hpy99I | CGWCG | 9 cut(s) | 34, 110, 233, 250, 256, 356, 391, 403, 683 |
| HpyCH4III | ACNGT | 7 cut(s) | 131, 331, 461, 583, 1429, 2326, 2937 |
| HpyCH4IV | ACGT | 5 cut(s) | 231, 621, 1328, 2350, 2901 |
| HpySE526I | ACGT | 5 cut(s) | 231, 621, 1328, 2350, 2901 |
| Hsp92I | GRCGYC | 2 cut(s) | 251, 386 |
| Hsp92II | CATG | 7 cut(s) | 562, 1133, 1882, 2145, 2371, 2774, 3099 |
| HspAI | GCGC | 6 cut(s) | 90, 297, 305, 668, 828, 1865 |
| KroI | GCCGGC | 1 cut(s) | 221 |
| KroNI | GCCGGC | 1 cut(s) | 223 |
| Ksp22I | TGATCA | 2 cut(s) | 162, 1126 |
| KspAI | GTTAAC | 4 cut(s) | 697, 1167, 1519, 2563 |
| KspI | CCGCGG | 1 cut(s) | 117 |
| LguI | GCTCTTC | 3 cut(s) | 44, 908, 1062 |
| LmnI | GCTCC | 9 cut(s) | 26, 34, 264, 908, 1334, 1580, 1634, 1931, 3018 |
| Lsp1109I | GCAGC | 9 cut(s) | 260, 360, 657, 936, 980, 987, 1171, 1645, 2641 |
| LweI | GCATC | 6 cut(s) | 136, 1021, 1570, 1753, 2995, 3102 |
| MaeI | CTAG | 4 cut(s) | 473, 2391, 2766, 3258 |
| MaeII | ACGT | 5 cut(s) | 231, 621, 1328, 2350, 2901 |
| MbiI | CCGCTC | 1 cut(s) | 337 |
| MfeI | CAATTG | 1 cut(s) | 2601 |
| MflI | RGATCY | 6 cut(s) | 4, 508, 1065, 2125, 2869, 2974 |
| MhlI | GDGCHC | 6 cut(s) | 39, 581, 1138, 2120, 2841, 3155 |
| MluI | ACGCGT | 1 cut(s) | 396 |
| MmeI | TCCRAC | 3 cut(s) | 12, 1206, 2384 |
| MreI | CGCCGGCG | 1 cut(s) | 221 |
| MroNI | GCCGGC | 1 cut(s) | 221 |
| MroXI | GAANNNNTTC | 4 cut(s) | 347, 530, 894, 2306 |
| MslI | CAYNNNNRTG | 4 cut(s) | 503, 561, 1877, 3202 |
| MspA1I | CMGCKG | 5 cut(s) | 116, 373, 927, 1000, 2645 |
| MspI | CCGG | 5 cut(s) | 93, 222, 1188, 1642, 2377 |
| MspR9I | CCNGG | 3 cut(s) | 788, 1382, 2172 |
| MunI | CAATTG | 1 cut(s) | 2601 |
| Mva1269I | GAATGC | 1 cut(s) | 2197 |
| MvaI | CCWGG | 3 cut(s) | 788, 1382, 2172 |
| MvnI | CGCG | 5 cut(s) | 116, 305, 398, 403, 828 |
| NaeI | GCCGGC | 1 cut(s) | 223 |
| NcoI | CCATGG | 1 cut(s) | 2770 |
| NgoMIV | GCCGGC | 1 cut(s) | 221 |
| NheI | GCTAGC | 1 cut(s) | 472 |
| NlaIII | CATG | 7 cut(s) | 562, 1133, 1882, 2145, 2371, 2774, 3099 |
| NlaIV | GGNNCC | 7 cut(s) | 112, 736, 1067, 1135, 2127, 2849, 2976 |
| NmeAIII | GCCGAG | 5 cut(s) | 175, 217, 266, 291, 712 |
| NmuCI | GTSAC | 8 cut(s) | 494, 946, 1822, 1950, 2291, 2573, 2761, 3215 |
| NspI | RCATGY | 1 cut(s) | 3099 |
| NspV | TTCGAA | 1 cut(s) | 2537 |
| OliI | CACNNNNGTG | 1 cut(s) | 561 |
| PaeI | GCATGC | 1 cut(s) | 3099 |
| PaeR7I | CTCGAG | 1 cut(s) | 1806 |
| PasI | CCCWGGG | 1 cut(s) | 787 |
| PceI | AGGCCT | 1 cut(s) | 2395 |
| PciSI | GCTCTTC | 3 cut(s) | 44, 908, 1062 |
| PcsI | WCGNNNNNNNCGW | 5 cut(s) | 141, 225, 351, 395, 684 |
| PctI | GAATGC | 1 cut(s) | 2197 |
| PdiI | GCCGGC | 1 cut(s) | 223 |
| PdmI | GAANNNNTTC | 4 cut(s) | 347, 530, 894, 2306 |
| PfeI | GAWTC | 9 cut(s) | 520, 553, 701, 722, 728, 2332, 2513, 2660, 2702 |
| Pfl23II | CGTACG | 1 cut(s) | 437 |
| PflFI | GACNNNGTC | 2 cut(s) | 140, 250 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3015 |
| PpuMI | RGGWCCY | 5 cut(s) | 1216, 2551, 2635, 2677, 2719 |
| PshAI | GACNNNNGTC | 1 cut(s) | 1644 |
| PshBI | ATTAAT | 1 cut(s) | 1440 |
| PsiI | TTATAA | 3 cut(s) | 75, 770, 3063 |
| Psp124BI | GAGCTC | 2 cut(s) | 39, 2120 |
| Psp5II | RGGWCCY | 5 cut(s) | 1216, 2551, 2635, 2677, 2719 |
| Psp6I | CCWGG | 3 cut(s) | 786, 1380, 2170 |
| PspGI | CCWGG | 3 cut(s) | 786, 1380, 2170 |
| PspLI | CGTACG | 1 cut(s) | 437 |
| PspN4I | GGNNCC | 7 cut(s) | 112, 736, 1067, 1135, 2127, 2849, 2976 |
| PspPPI | RGGWCCY | 5 cut(s) | 1216, 2551, 2635, 2677, 2719 |
| PstI | CTGCAG | 1 cut(s) | 2818 |
| PsuI | RGATCY | 6 cut(s) | 4, 508, 1065, 2125, 2869, 2974 |
| PsyI | GACNNNGTC | 2 cut(s) | 140, 250 |
| PvuII | CAGCTG | 2 cut(s) | 1000, 2645 |
| RsaI | GTAC | 8 cut(s) | 439, 799, 1471, 1550, 2323, 2829, 3228, 3246 |
| RsaNI | GTAC | 8 cut(s) | 438, 798, 1470, 1549, 2322, 2828, 3227, 3245 |
| RseI | CAYNNNNRTG | 4 cut(s) | 503, 561, 1877, 3202 |
| Rsr2I | CGGWCCG | 1 cut(s) | 127 |
| RsrII | CGGWCCG | 1 cut(s) | 127 |
| SacI | GAGCTC | 2 cut(s) | 39, 2120 |
| SacII | CCGCGG | 1 cut(s) | 117 |
| SapI | GCTCTTC | 3 cut(s) | 44, 908, 1062 |
| ScaI | AGTACT | 2 cut(s) | 1550, 3246 |
| ScrFI | CCNGG | 3 cut(s) | 788, 1382, 2172 |
| SduI | GDGCHC | 6 cut(s) | 39, 581, 1138, 2120, 2841, 3155 |
| SfaNI | GCATC | 6 cut(s) | 136, 1021, 1570, 1753, 2995, 3102 |
| SfcI | CTRYAG | 3 cut(s) | 1374, 1767, 2814 |
| Sfr274I | CTCGAG | 1 cut(s) | 1806 |
| Sfr303I | CCGCGG | 1 cut(s) | 117 |
| SfuI | TTCGAA | 1 cut(s) | 2537 |
| SgrAI | CRCCGGYG | 1 cut(s) | 221 |
| SgrBI | CCGCGG | 1 cut(s) | 117 |
| SlaI | CTCGAG | 1 cut(s) | 1806 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 503, 561, 1877, 3202 |
| SmlI | CTYRAG | 8 cut(s) | 422, 1211, 1392, 1522, 1806, 2103, 2494, 2755 |
| SmoI | CTYRAG | 8 cut(s) | 422, 1211, 1392, 1522, 1806, 2103, 2494, 2755 |
| SpeI | ACTAGT | 1 cut(s) | 3257 |
| SphI | GCATGC | 1 cut(s) | 3099 |
| SseBI | AGGCCT | 1 cut(s) | 2395 |
| SspI | AATATT | 3 cut(s) | 1981, 2020, 2968 |
| SspMI | CTAG | 4 cut(s) | 473, 2391, 2766, 3258 |
| SstI | GAGCTC | 2 cut(s) | 39, 2120 |
| StuI | AGGCCT | 1 cut(s) | 2395 |
| StyD4I | CCNGG | 3 cut(s) | 786, 1380, 2170 |
| StyI | CCWWGG | 6 cut(s) | 453, 606, 738, 1530, 2071, 2770 |
| TaaI | ACNGT | 7 cut(s) | 131, 331, 461, 583, 1429, 2326, 2937 |
| TaiI | ACGT | 5 cut(s) | 234, 624, 1331, 2353, 2904 |
| TaqII | GACCGA | 2 cut(s) | 130, 255 |
| TatI | WGTACW | 5 cut(s) | 1548, 2321, 2827, 3226, 3244 |
| TauI | GCSGC | 9 cut(s) | 116, 119, 228, 318, 373, 386, 686, 795, 821 |
| TfiI | GAWTC | 9 cut(s) | 520, 553, 701, 722, 728, 2332, 2513, 2660, 2702 |
| TseFI | GTSAC | 8 cut(s) | 494, 946, 1822, 1950, 2291, 2573, 2761, 3215 |
| TseI | GCWGC | 9 cut(s) | 273, 373, 670, 924, 968, 1000, 1184, 1658, 2654 |
| Tsp45I | GTSAC | 8 cut(s) | 494, 946, 1822, 1950, 2291, 2573, 2761, 3215 |
| TspDTI | ATGAA | 8 cut(s) | 1049, 1166, 1277, 1506, 1521, 2716, 2822, 2940 |
| TspGWI | ACGGA | 6 cut(s) | 94, 455, 694, 857, 953, 1271 |
| Tth111I | GACNNNGTC | 2 cut(s) | 140, 250 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3015 |
| VneI | GTGCAC | 2 cut(s) | 2837, 3151 |
| VspI | ATTAAT | 1 cut(s) | 1440 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2043 |
| XapI | RAATTY | 5 cut(s) | 1048, 1107, 2243, 2384, 3041 |
| XceI | RCATGY | 1 cut(s) | 3099 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 544 |
| XhoI | CTCGAG | 1 cut(s) | 1806 |
| XmnI | GAANNNNTTC | 4 cut(s) | 347, 530, 894, 2306 |
| XspI | CTAG | 4 cut(s) | 473, 2391, 2766, 3258 |
| ZrmI | AGTACT | 2 cut(s) | 1550, 3246 |