FvH4_1g02370

ankyrin repeats

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000679
Physical Location & Seq
Reverse (-)
1289550 .. 1298181
8632 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g02370.t2

Sequence Viewer

Length: 3030 bp
ATGAGCATTCTTCGCTCTCGAATCCTGAGCTCCGTTAAGGGAGTTGAAGTAGATCTGAAAATACGACCGGAGCTCTTCAACAAGCCTTCCAAACGTACATATTTCGGTGAATGTTCGTGCCACTTCCGAGTCCCACGATATCATTGGGTCGAGGACGAACCGGGTTTGATCGAAGCCGTCCGTGACGACAACAAGAGCAATCTCGTCACTCAGATGGAGCTTCTCACCGCCAGAGTTTCGCCGGACCAAAGGACGAGGACGGCCTCGAAACTGCTGCACCTATGCTGCAAATTTGACTCGCACAACTGCGCCTCCGCGATTCTGGACGGCGAGCTCGGGGCGGTTCCGTTGGTGAACGAGTGTGACGACTACTCCGGGAAATCGCCGCTGCACACGGCGGCGTCGGCTCACGCTTCGCGGTGCGTGGAGGTTTTGCTCGACAAACAGGCACGTACCGACCTGAGGACCAGAGACGGTCAGGCGCAGCTTGCGCTGCAGCTGTGTTTGACTACTGACACAAGGATTGATCTGAATCGGAACCCGGACGATTTCTCCGTCCAAGAATTGCTGATTCACATTAGTGAAAAGCAATTACGCACTGTGAAGCTTCTGAGTGAAAAAACGAAGGAGATAGCTGACGTGGCGTACGCCTACGCCGTCAAAGGCCGTGTAGCTTCACTGACGGCGCTGCTCATCGTCGCCGCCGATAAGCTTATCGATTCCGTCGTAGAGTGGCCTGATTCCAAATCGCAGTTTAAGGAGAAGTTGACTATCTACGAATGCCTTATAAGGAAGGCTTTGACCCTCGGCGGCCGTGCAACGCCGCCGTTGAGGGCGGCGAAACGAGCCTCCACGGCGACGGAGGGCGAAAACTCGGAGAGAAGGAAGCTATTGCTGAGAGAGATAGAGCTGCTTCAGCTGTTCGGAGCTGTTGCTCAGAAGAACGGTGGTGGGGACAATAATTTGACTCCACCGCTCATCCGTGCAGCTCAGGGAGGAGATGAAGCTGTTGTTCAGCTGCTTCTGCGGAGTAAAATTGATGTCAATGAAGCTGATGCACAAGGAAACACTGCTGTTCATTGCATCCTTAAATCCAGATTGTTGTGTCCTCAACAGATCAGAATTCTATGGCTTCTTCTTGAGCATGGCGCTCTACCGTGTCAAAGGAATAAATTGGGGGAGACACCATTTCATATTGCTGCTGGAAATGGTAATTCAGAGGCCCTTCAGGTCCTTCTGTTGGAAGATCCAGTTGGCGTCCTATATAAGACGGAAATGAAAGAAACCCCCTTGTTTTTCGCCGTGAAGAATGAGAGTAAGGAGTGTGCTAAGCTTCTTTTGACATGGGGAGCAAATAGTGAAGTCCGTAATCTGCGTAGGCAAAGAGCTATAGACCTGGCAACCTCTCTGGATATGCGTTACATATTGCTGAACCCAACCACAGTTAGCCTCATAAATCATGCTTTCCCAAAGGAGTCTCGGAAAGTGAAAGAGGGAGTAGACCATAGTTATTGTTTTGTTACTAAACTACTCAAACACAAAGTGTTTGTTGGAGGACTTCCTCCTTCAGTGGACTCTGATGATTTACGCAAGTTCTGTGAACAAGAGTTTGGATCAGTAGAAGATGCTATAGTCATTGTAACTGAAACAGAAAACAAGATACAGTCTAGAGGCTTTGGATTTGTCACATTTGGACAGGAGAAATCTGCTTCAGAAGCTATGCAAGCACACTACTTCACCATGGGAGGGAAGACAGTTGAAATAAAAAGTTTGATTCCAAAGTTGGTTTTAGAAGCTGAGTTTGAGAAAATGTCACCTCAACGAGAACAAGAGCAGAATTTTCAGTTTCTACAACAGAAGTCGAATGAGAGTATTATGGAAGGAGATAACCCTGAACAAGATTCTTGGGCTGACAGATTAGTCCATAGACAACCAACGGTGTGTTCCACTGAACCTCAAGTTACCAAGAGCTCTCAGGACCCTAGCACTCCTACATGGCGAAAGGTTTTCAATAAGTGGTTTCCTGGGTTCTTACAAGGTCTCTCGAAGCATTCAGATTATGCTCTCTCTTCTCTGAAAGTTGACTTCACGGCTAAATTTGGGTTAAAACTGGATCACTCATCTGTGGGCTTCTCTAAGCTCAGTGACTTCCTGATGTATCCCCCTGATTTATGTACCATCAAGAGGAGAACACCAAATCACATGATCCTTCAGCCAAAATTTTCTAGTCACACTCTGTCTTTGTCTCTATATATTGTCAATAGTGGTGATTCAAGGTGTCTTTCAGACGTCTTAAGTGGCGGTGGTGGTCATTCAAAGGATCTTCAGAACTTTTCTGTTGACAGTGGTAATGATGATGAGAAGTGTCTCCAGGACCTTCCAGGTGACAATGCTATTGCTACAAAGAGCCTCCATGACCTTTCACTTGACTTTAAATCGTGCAAGGTTAAAGGCACAACAAATGTAGCATGGGTTTCAGAAGACTTTATAGCTCTTGCTGTTGATTCTCGCGGTACTTGCGGAACAGAACTAGTCGGAGATACATACCCCAAAATTCAAAAAGTCAGCCCCTACGTACTGTCGACGATGGTTGGTGATTCAGAGCAAGTTCGCAAGACAATTCAACACATGATCAATACGATTGATGAGAAGACCGCTAATGGGACAGATCCGGAATGTGTAAAGAAGGTGGGCCGTGCTGGATGTTCAACAAATAGAGATCCTAATGCAGCTGGATCCATGTGCTTTATTGCTGGTGTACAATCCCAGGCTCCACGCTGTTACTTACTGTACGATTTACAGAAGACGGATAAAGTTCGAGATTGTGCTTTGGATGATGTCCTAACTTGGAAAGCAATTGGCAGTGGCGCTACCTTTGCTGCATATGTAGTAGAAAGAATGTGGAGAAAGTATCCAGATGGTAGAGCTTCAATTGAAGATGTCGTTCAAATTCTCTTATATGCTATGTTGACGTCTACTTTGCGTGATTATGCAACCGGAGGAATACTGACCGGTATTTCTCACCCCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

1010

Amino Acids

111.93

Weight (kDa)

7.07

Isoelectric Point (pI)

41.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 56 - 153 1.3e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 375 - 455 7.2e-11 Ankyrin repeats (3 copies)
Ank_4 PF13637 378 - 413 4.8e-06 Ankyrin repeats (many copies)
Ank_5 PF13857 379 - 431 4e-06 Ankyrin repeats (many copies)
RRM_1 PF00076 515 - 586 6.8e-13 RNA recognition motif
OST-HTH PF12872 683 - 735 9.5e-07 OST-HTH/LOTUS domain
Proteasome PF00227 817 - 1005 1.2e-08 Proteasome subunit
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 788
AasI GACNNNNNNGTC 1 cut(s) 1919
AatII GACGTC 2 cut(s) 2292, 2975
AccBSI CCGCTC 1 cut(s) 976
AccI GTMKAC 3 cut(s) 1500, 2582, 2975
AccII CGCG 3 cut(s) 317, 418, 2511
AccIII TCCGGA 1 cut(s) 2671
AclWI GGATC 9 cut(s) 1241, 1621, 2121, 2200, 2328, 2663, 2714, 2730, 2743
AcoI YGGCCR 1 cut(s) 811
AcsI RAATTY 7 cut(s) 290, 1122, 1837, 2096, 2219, 2553, 2949
AcuI CTGAAG 6 cut(s) 899, 1211, 1551, 1695, 2195, 2309
AcyI GRCGYC 4 cut(s) 401, 1257, 2289, 2972
AdeI CACNNNGTG 1 cut(s) 1543
AfaI GTAC 8 cut(s) 97, 454, 647, 2176, 2515, 2577, 2760, 2792
AfiI CCNNNNNNNGG 5 cut(s) 462, 1240, 1746, 2184, 2661
AflII CTTAAG 1 cut(s) 2293
AgeI ACCGGT 1 cut(s) 3011
AhlI ACTAGT 1 cut(s) 2530
AjiI CACGTC 1 cut(s) 640
AjnI CCWGG 5 cut(s) 1395, 2023, 2370, 2380, 2766
AjuI GAANNNNNNNTTGG 6 cut(s) 1236, 1268, 1593, 1625, 1927, 1959
AleI CACNNNNGTG 1 cut(s) 579
Alw21I GWGCWC 4 cut(s) 32, 75, 336, 1973
Alw26I GTCTC 6 cut(s) 465, 1175, 1482, 2045, 2250, 2372
AlwI GGATC 9 cut(s) 1241, 1621, 2121, 2200, 2328, 2663, 2714, 2730, 2743
Ama87I CYCGRG 1 cut(s) 335
Aor13HI TCCGGA 1 cut(s) 2671
AoxI GGCC 6 cut(s) 261, 664, 734, 811, 1221, 2692
ApoI RAATTY 7 cut(s) 290, 1122, 1837, 2096, 2219, 2553, 2949
ArsI GACNNNNNNTTYG 2 cut(s) 2962, 2994
AsiGI ACCGGT 1 cut(s) 3011
AspLEI GCGC 6 cut(s) 311, 484, 493, 688, 1151, 2870
AspS9I GGNCC 7 cut(s) 244, 465, 1222, 1231, 1978, 2374, 2692
AsuC2I CCSGG 3 cut(s) 162, 376, 542
AsuHPI GGTGA 9 cut(s) 119, 217, 364, 1729, 1806, 2279, 2396, 2606, 3014
AvaI CYCGRG 1 cut(s) 335
AvaII GGWCC 5 cut(s) 244, 465, 1231, 1978, 2374
AxyI CCTNAGG 1 cut(s) 461
BamHI GGATCC 1 cut(s) 2735
BanII GRGCYC 4 cut(s) 32, 75, 336, 1973
BbsI GAAGAC 4 cut(s) 1757, 2487, 2657, 2810
Bbv12I GWGCWC 4 cut(s) 32, 75, 336, 1973
BccI CCATC 4 cut(s) 208, 2186, 2581, 2912
BcgI CGANNNNNNTGC 2 cut(s) 256, 290
BciT130I CCWGG 5 cut(s) 1397, 2025, 2372, 2382, 2768
BciVI GTATCC 2 cut(s) 2169, 2922
BclI TGATCA 1 cut(s) 2631
BcnI CCSGG 3 cut(s) 162, 376, 542
BcoDI GTCTC 6 cut(s) 465, 1175, 1482, 2045, 2250, 2372
BcuI ACTAGT 1 cut(s) 2530
BfaI CTAG 5 cut(s) 1668, 1983, 2226, 2531, 3028
BfmI CTRYAG 3 cut(s) 494, 1389, 1629
BfoI RGCGCY 3 cut(s) 689, 1152, 2871
BfrI CTTAAG 1 cut(s) 2293
BfuI GTATCC 2 cut(s) 2169, 2922
BglI GCCNNNNNGGC 1 cut(s) 854
BglII AGATCT 1 cut(s) 52
BlpI GCTNAGC 1 cut(s) 1329
Bme1390I CCNGG 8 cut(s) 162, 376, 542, 1397, 2025, 2372, 2382, 2768
Bme18I GGWCC 5 cut(s) 244, 465, 1231, 1978, 2374
BmeT110I CYCGRG 1 cut(s) 335
BmgBI CACGTC 1 cut(s) 640
BmgT120I GGNCC 7 cut(s) 244, 465, 1222, 1231, 1978, 2374, 2692
BmiI GGNNCC 5 cut(s) 345, 539, 1980, 2737, 2772
BmrFI CCNGG 8 cut(s) 162, 376, 542, 1397, 2025, 2372, 2382, 2768
BmsI GCATC 3 cut(s) 1045, 1092, 1615
BpiI GAAGAC 4 cut(s) 1757, 2487, 2657, 2810
BpmI CTGGAG 1 cut(s) 2354
Bpu10I CCTNAGC 2 cut(s) 26, 990
Bpu1102I GCTNAGC 1 cut(s) 1329
BpuEI CTTGAG 2 cut(s) 1160, 1941
BpuMI CCSGG 3 cut(s) 162, 376, 542
Bsa29I ATCGAT 1 cut(s) 717
BsaAI YACGTR 2 cut(s) 452, 2575
BsaBI GATNNNNATC 1 cut(s) 531
BsaHI GRCGYC 4 cut(s) 401, 1257, 2289, 2972
BsaI GGTCTC 1 cut(s) 2045
BsaJI CCNNGG 5 cut(s) 805, 852, 1740, 2024, 2766
BsaWI WCCGGW 4 cut(s) 67, 2671, 2996, 3011
BsaXI ACNNNNNCTCC 8 cut(s) 33, 63, 296, 326, 356, 386, 536, 566
Bsc4I CCNNNNNNNGG 5 cut(s) 462, 1240, 1746, 2184, 2661
Bse118I RCCGGY 1 cut(s) 3011
Bse1I ACTGG 2 cut(s) 1250, 2115
Bse21I CCTNAGG 1 cut(s) 461
Bse3DI GCAATG 1 cut(s) 1078
Bse8I GATNNNNATC 1 cut(s) 531
BseAI TCCGGA 1 cut(s) 2671
BseBI CCWGG 5 cut(s) 1397, 2025, 2372, 2382, 2768
BseCI ATCGAT 1 cut(s) 717
BseDI CCNNGG 5 cut(s) 805, 852, 1740, 2024, 2766
BseGI GGATG 4 cut(s) 978, 1083, 2708, 2839
BseJI GATNNNNATC 1 cut(s) 531
BseLI CCNNNNNNNGG 5 cut(s) 462, 1240, 1746, 2184, 2661
BseMI GCAATG 1 cut(s) 1078
BseNI ACTGG 2 cut(s) 1250, 2115
BseRI GAGGAG 2 cut(s) 1011, 2200
BseX3I CGGCCG 1 cut(s) 811
BsgI GTGCAG 3 cut(s) 260, 374, 1005
Bsh1236I CGCG 3 cut(s) 317, 418, 2511
Bsh1285I CGRYCG 2 cut(s) 68, 814
BshFI GGCC 6 cut(s) 263, 666, 736, 813, 1223, 2694
BshTI ACCGGT 1 cut(s) 3011
BshVI ATCGAT 1 cut(s) 717
BsiEI CGRYCG 2 cut(s) 68, 814
BsiHKAI GWGCWC 4 cut(s) 32, 75, 336, 1973
BsiHKCI CYCGRG 1 cut(s) 335
BsiSI CCGG 8 cut(s) 68, 161, 242, 375, 542, 2672, 2997, 3012
BsiWI CGTACG 1 cut(s) 645
BslFI GGGAC 3 cut(s) 116, 968, 2677
BslI CCNNNNNNNGG 5 cut(s) 462, 1240, 1746, 2184, 2661
BsmAI GTCTC 6 cut(s) 465, 1175, 1482, 2045, 2250, 2372
BsmBI CGTCTC 1 cut(s) 465
BsmFI GGGAC 3 cut(s) 116, 968, 2677
BsmI GAATGC 3 cut(s) 6, 785, 2050
BsnI GGCC 6 cut(s) 263, 666, 736, 813, 1223, 2694
Bso31I GGTCTC 1 cut(s) 2045
BsoBI CYCGRG 1 cut(s) 335
Bsp1286I GDGCHC 4 cut(s) 32, 75, 336, 1973
Bsp13I TCCGGA 1 cut(s) 2671
Bsp1407I TGTACA 1 cut(s) 2758
Bsp1720I GCTNAGC 1 cut(s) 1329
Bsp19I CCATGG 1 cut(s) 1740
BspANI GGCC 6 cut(s) 263, 666, 736, 813, 1223, 2694
BspDI ATCGAT 1 cut(s) 717
BspEI TCCGGA 1 cut(s) 2671
BspFNI CGCG 3 cut(s) 317, 418, 2511
BspLI GGNNCC 5 cut(s) 345, 539, 1980, 2737, 2772
BspMAI CTGCAG 1 cut(s) 498
BspPI GGATC 9 cut(s) 1241, 1621, 2121, 2200, 2328, 2663, 2714, 2730, 2743
BspQI GCTCTTC 1 cut(s) 80
BspTI CTTAAG 1 cut(s) 2293
BspTNI GGTCTC 1 cut(s) 2045
BsrBI CCGCTC 1 cut(s) 976
BsrDI GCAATG 1 cut(s) 1078
BsrFI RCCGGY 1 cut(s) 3011
BsrGI TGTACA 1 cut(s) 2758
BsrI ACTGG 2 cut(s) 1250, 2115
BssAI RCCGGY 1 cut(s) 3011
BssECI CCNNGG 5 cut(s) 805, 852, 1740, 2024, 2766
BssNI GRCGYC 4 cut(s) 401, 1257, 2289, 2972
BssT1I CCWWGG 1 cut(s) 1740
Bst2UI CCWGG 5 cut(s) 1397, 2025, 2372, 2382, 2768
Bst6I CTCTTC 2 cut(s) 80, 2074
BstACI GRCGYC 4 cut(s) 401, 1257, 2289, 2972
BstAFI CTTAAG 1 cut(s) 2293
BstAUI TGTACA 1 cut(s) 2758
BstBAI YACGTR 2 cut(s) 452, 2575
BstC8I GCNNGC 3 cut(s) 332, 489, 1725
BstDSI CCRYGG 2 cut(s) 852, 1740
BstF5I GGATG 4 cut(s) 978, 1083, 2708, 2839
BstFNI CGCG 3 cut(s) 317, 418, 2511
BstH2I RGCGCY 3 cut(s) 689, 1152, 2871
BstHHI GCGC 6 cut(s) 311, 484, 493, 688, 1151, 2870
BstMAI GTCTC 6 cut(s) 465, 1175, 1482, 2045, 2250, 2372
BstMCI CGRYCG 2 cut(s) 68, 814
BstNI CCWGG 5 cut(s) 1397, 2025, 2372, 2382, 2768
BstSCI CCNGG 8 cut(s) 160, 374, 540, 1395, 2023, 2370, 2380, 2766
BstSFI CTRYAG 3 cut(s) 494, 1389, 1629
BstSNI TACGTA 1 cut(s) 2575
BstUI CGCG 3 cut(s) 317, 418, 2511
BstV2I GAAGAC 4 cut(s) 1757, 2487, 2657, 2810
BstX2I RGATCY 6 cut(s) 52, 1246, 2320, 2668, 2719, 2735
BstYI RGATCY 6 cut(s) 52, 1246, 2320, 2668, 2719, 2735
BstZI CGGCCG 1 cut(s) 811
Bsu15I ATCGAT 1 cut(s) 717
Bsu36I CCTNAGG 1 cut(s) 461
BsuI GTATCC 2 cut(s) 2169, 2922
BsuRI GGCC 6 cut(s) 263, 666, 736, 813, 1223, 2694
BsuTUI ATCGAT 1 cut(s) 717
BtgI CCRYGG 2 cut(s) 852, 1740
BtrI CACGTC 1 cut(s) 640
BtsCI GGATG 4 cut(s) 978, 1083, 2708, 2839
BtsI GCAGTG 2 cut(s) 1068, 2869
BtsIMutI CAGTG 8 cut(s) 597, 677, 1068, 1575, 1947, 2149, 2350, 2869
Cac8I GCNNGC 3 cut(s) 332, 489, 1725
CfoI GCGC 6 cut(s) 311, 484, 493, 688, 1151, 2870
Cfr10I RCCGGY 1 cut(s) 3011
Cfr13I GGNCC 7 cut(s) 244, 465, 1222, 1231, 1978, 2374, 2692
ClaI ATCGAT 1 cut(s) 717
CseI GACGC 2 cut(s) 390, 1246
Csp6I GTAC 8 cut(s) 96, 453, 646, 2175, 2514, 2576, 2759, 2791
CspAI ACCGGT 1 cut(s) 3011
CviQI GTAC 8 cut(s) 96, 453, 646, 2175, 2514, 2576, 2759, 2791
DraI TTTAAA 1 cut(s) 2434
DraIII CACNNNGTG 1 cut(s) 1543
DrdI GACNNNNNNGTC 1 cut(s) 1919
DseDI GACNNNNNNGTC 1 cut(s) 1919
EaeI YGGCCR 1 cut(s) 811
EagI CGGCCG 1 cut(s) 811
Eam1104I CTCTTC 2 cut(s) 80, 2074
EarI CTCTTC 2 cut(s) 80, 2074
Ecl136II GAGCTC 4 cut(s) 30, 73, 334, 1971
EclXI CGGCCG 1 cut(s) 811
Eco105I TACGTA 1 cut(s) 2575
Eco130I CCWWGG 1 cut(s) 1740
Eco24I GRGCYC 4 cut(s) 32, 75, 336, 1973
Eco31I GGTCTC 1 cut(s) 2045
Eco32I GATATC 1 cut(s) 140
Eco47I GGWCC 5 cut(s) 244, 465, 1231, 1978, 2374
Eco52I CGGCCG 1 cut(s) 811
Eco53kI GAGCTC 4 cut(s) 30, 73, 334, 1971
Eco57I CTGAAG 6 cut(s) 899, 1211, 1551, 1695, 2195, 2309
Eco81I CCTNAGG 1 cut(s) 461
Eco88I CYCGRG 1 cut(s) 335
EcoICRI GAGCTC 4 cut(s) 30, 73, 334, 1971
EcoO109I RGGNCCY 4 cut(s) 1222, 1231, 1978, 2374
EcoRI GAATTC 1 cut(s) 1122
EcoRII CCWGG 5 cut(s) 1395, 2023, 2370, 2380, 2766
EcoRV GATATC 1 cut(s) 140
EcoT14I CCWWGG 1 cut(s) 1740
EcoT38I GRGCYC 4 cut(s) 32, 75, 336, 1973
ErhI CCWWGG 1 cut(s) 1740
Esp3I CGTCTC 1 cut(s) 465
FalI AAGNNNNNCTT 2 cut(s) 781, 813
FaqI GGGAC 3 cut(s) 116, 968, 2677
FauNDI CATATG 1 cut(s) 2884
FbaI TGATCA 1 cut(s) 2631
FblI GTMKAC 3 cut(s) 1500, 2582, 2975
FokI GGATG 4 cut(s) 965, 1070, 2715, 2846
FriOI GRGCYC 4 cut(s) 32, 75, 336, 1973
FspBI CTAG 5 cut(s) 1668, 1983, 2226, 2531, 3028
GlaI GCGC 6 cut(s) 310, 483, 492, 687, 1150, 2869
GsuI CTGGAG 1 cut(s) 2354
HaeII RGCGCY 3 cut(s) 689, 1152, 2871
HaeIII GGCC 6 cut(s) 263, 666, 736, 813, 1223, 2694
HapII CCGG 8 cut(s) 68, 161, 242, 375, 542, 2672, 2997, 3012
HgaI GACGC 2 cut(s) 390, 1246
HhaI GCGC 6 cut(s) 311, 484, 493, 688, 1151, 2870
Hin1I GRCGYC 4 cut(s) 401, 1257, 2289, 2972
Hin6I GCGC 6 cut(s) 309, 482, 491, 686, 1149, 2868
HinP1I GCGC 6 cut(s) 309, 482, 491, 686, 1149, 2868
HincII GTYRAC 5 cut(s) 768, 2083, 2341, 2583, 2970
HindII GTYRAC 5 cut(s) 768, 2083, 2341, 2583, 2970
HindIII AAGCTT 3 cut(s) 605, 710, 1331
HpaII CCGG 8 cut(s) 68, 161, 242, 375, 542, 2672, 2997, 3012
HphI GGTGA 9 cut(s) 119, 217, 364, 1729, 1806, 2279, 2396, 2606, 3014
Hpy99I CGWCG 5 cut(s) 406, 701, 728, 862, 2587
HpyCH4IV ACGT 6 cut(s) 94, 451, 639, 2289, 2574, 2972
HpySE526I ACGT 6 cut(s) 94, 451, 639, 2289, 2574, 2972
Hsp92I GRCGYC 4 cut(s) 401, 1257, 2289, 2972
HspAI GCGC 6 cut(s) 309, 482, 491, 686, 1149, 2868
Kpn2I TCCGGA 1 cut(s) 2671
Ksp22I TGATCA 1 cut(s) 2631
LguI GCTCTTC 1 cut(s) 80
LmnI GCTCC 6 cut(s) 35, 70, 217, 926, 1349, 2776
LweI GCATC 3 cut(s) 1045, 1092, 1615
MaeI CTAG 5 cut(s) 1668, 1983, 2226, 2531, 3028
MaeII ACGT 6 cut(s) 94, 451, 639, 2289, 2574, 2972
MbiI CCGCTC 1 cut(s) 976
MfeI CAATTG 2 cut(s) 2856, 2931
MflI RGATCY 6 cut(s) 52, 1246, 2320, 2668, 2719, 2735
MhlI GDGCHC 4 cut(s) 32, 75, 336, 1973
MlyI GAGTC 5 cut(s) 138, 290, 961, 1484, 1568
MmeI TCCRAC 3 cut(s) 1221, 1531, 2515
MroI TCCGGA 1 cut(s) 2671
MseI TTAA 7 cut(s) 36, 756, 1089, 2105, 2294, 2433, 2448
MslI CAYNNNNRTG 2 cut(s) 212, 579
MspA1I CMGCKG 5 cut(s) 388, 499, 919, 1018, 2732
MspCI CTTAAG 1 cut(s) 2293
MspI CCGG 8 cut(s) 68, 161, 242, 375, 542, 2672, 2997, 3012
MspR9I CCNGG 8 cut(s) 162, 376, 542, 1397, 2025, 2372, 2382, 2768
MunI CAATTG 2 cut(s) 2856, 2931
Mva1269I GAATGC 3 cut(s) 6, 785, 2050
MvaI CCWGG 5 cut(s) 1397, 2025, 2372, 2382, 2768
MvnI CGCG 3 cut(s) 317, 418, 2511
NciI CCSGG 3 cut(s) 162, 376, 542
NcoI CCATGG 1 cut(s) 1740
NdeI CATATG 1 cut(s) 2884
NlaIV GGNNCC 5 cut(s) 345, 539, 1980, 2737, 2772
NmeAIII GCCGAG 1 cut(s) 786
NmuCI GTSAC 8 cut(s) 182, 205, 362, 1684, 1812, 2144, 2228, 2384
OliI CACNNNNGTG 1 cut(s) 579
PciSI GCTCTTC 1 cut(s) 80
PcsI WCGNNNNNNNCGW 5 cut(s) 363, 552, 654, 702, 723
PctI GAATGC 3 cut(s) 6, 785, 2050
Pfl23II CGTACG 1 cut(s) 645
PfoI TCCNGGA 2 cut(s) 374, 2370
PinAI ACCGGT 1 cut(s) 3011
PleI GAGTC 5 cut(s) 137, 290, 961, 1483, 1568
PpsI GAGTC 5 cut(s) 137, 290, 961, 1483, 1568
Ppu21I YACGTR 2 cut(s) 452, 2575
PpuMI RGGWCCY 3 cut(s) 1231, 1978, 2374
PsiI TTATAA 1 cut(s) 788
Psp124BI GAGCTC 4 cut(s) 32, 75, 336, 1973
Psp5II RGGWCCY 3 cut(s) 1231, 1978, 2374
Psp6I CCWGG 5 cut(s) 1395, 2023, 2370, 2380, 2766
PspGI CCWGG 5 cut(s) 1395, 2023, 2370, 2380, 2766
PspLI CGTACG 1 cut(s) 645
PspN4I GGNNCC 5 cut(s) 345, 539, 1980, 2737, 2772
PspPI GGNCC 7 cut(s) 244, 465, 1222, 1231, 1978, 2374, 2692
PspPPI RGGWCCY 3 cut(s) 1231, 1978, 2374
PstI CTGCAG 1 cut(s) 498
PsuI RGATCY 6 cut(s) 52, 1246, 2320, 2668, 2719, 2735
PvuII CAGCTG 4 cut(s) 499, 919, 1018, 2732
RsaI GTAC 8 cut(s) 97, 454, 647, 2176, 2515, 2577, 2760, 2792
RsaNI GTAC 8 cut(s) 96, 453, 646, 2175, 2514, 2576, 2759, 2791
RseI CAYNNNNRTG 2 cut(s) 212, 579
SacI GAGCTC 4 cut(s) 32, 75, 336, 1973
SalI GTCGAC 1 cut(s) 2581
SapI GCTCTTC 1 cut(s) 80
SaqAI TTAA 7 cut(s) 36, 756, 1089, 2105, 2294, 2433, 2448
Sau96I GGNCC 7 cut(s) 244, 465, 1222, 1231, 1978, 2374, 2692
SchI GAGTC 5 cut(s) 138, 290, 961, 1484, 1568
ScrFI CCNGG 8 cut(s) 162, 376, 542, 1397, 2025, 2372, 2382, 2768
SduI GDGCHC 4 cut(s) 32, 75, 336, 1973
SfaNI GCATC 3 cut(s) 1045, 1092, 1615
SfcI CTRYAG 3 cut(s) 494, 1389, 1629
SinI GGWCC 5 cut(s) 244, 465, 1231, 1978, 2374
SmiMI CAYNNNNRTG 2 cut(s) 212, 579
SmlI CTYRAG 3 cut(s) 1139, 1956, 2293
SmoI CTYRAG 3 cut(s) 1139, 1956, 2293
SnaBI TACGTA 1 cut(s) 2575
SpeI ACTAGT 1 cut(s) 2530
SspMI CTAG 5 cut(s) 1668, 1983, 2226, 2531, 3028
SstI GAGCTC 4 cut(s) 32, 75, 336, 1973
StyD4I CCNGG 8 cut(s) 160, 374, 540, 1395, 2023, 2370, 2380, 2766
StyI CCWWGG 1 cut(s) 1740
TaiI ACGT 6 cut(s) 97, 454, 642, 2292, 2577, 2975
TatI WGTACW 1 cut(s) 2758
TauI GCSGC 6 cut(s) 388, 401, 704, 813, 826, 839
Tru1I TTAA 7 cut(s) 36, 756, 1089, 2105, 2294, 2433, 2448
Tru9I TTAA 7 cut(s) 36, 756, 1089, 2105, 2294, 2433, 2448
TscAI CASTG 8 cut(s) 604, 684, 1075, 1575, 1954, 2149, 2350, 2869
TseFI GTSAC 8 cut(s) 182, 205, 362, 1684, 1812, 2144, 2228, 2384
Tsp45I GTSAC 8 cut(s) 182, 205, 362, 1684, 1812, 2144, 2228, 2384
TspDTI ATGAA 5 cut(s) 1017, 1062, 1067, 1181, 1292
TspRI CASTG 8 cut(s) 604, 684, 1075, 1575, 1954, 2149, 2350, 2869
Vha464I CTTAAG 1 cut(s) 2293
VpaK11BI GGWCC 5 cut(s) 244, 465, 1231, 1978, 2374
XapI RAATTY 7 cut(s) 290, 1122, 1837, 2096, 2219, 2553, 2949
XbaI TCTAGA 1 cut(s) 1667
XcmI CCANNNNNNNNNTGG 1 cut(s) 141
XmiI GTMKAC 3 cut(s) 1500, 2582, 2975
XspI CTAG 5 cut(s) 1668, 1983, 2226, 2531, 3028
ZraI GACGTC 2 cut(s) 2290, 2973
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.