OST-HTH/LOTUS domain
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Ank_2 | PF12796 | 46 - 109 | 1e-07 | Ankyrin repeats (3 copies) |
| Ank_2 | PF12796 | 270 - 341 | 4.3e-06 | Ankyrin repeats (3 copies) |
| Ank_2 | PF12796 | 326 - 404 | 5e-10 | Ankyrin repeats (3 copies) |
| Ank_2 | PF12796 | 350 - 428 | 7.1e-07 | Ankyrin repeats (3 copies) |
| RRM_1 | PF00076 | 505 - 575 | 1.1e-13 | RNA recognition motif |
| OST-HTH | PF12872 | 665 - 720 | 2.5e-07 | OST-HTH/LOTUS domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 686, 3257 |
| AarI | CACCTGC | 1 cut(s) | 2773 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 2190 |
| Acc36I | ACCTGC | 2 cut(s) | 777, 2773 |
| AccB1I | GGYRCC | 1 cut(s) | 3113 |
| AccI | GTMKAC | 3 cut(s) | 60, 2182, 3008 |
| AccII | CGCG | 3 cut(s) | 134, 281, 567 |
| AcoI | YGGCCR | 3 cut(s) | 109, 709, 735 |
| AcsI | RAATTY | 4 cut(s) | 428, 922, 2072, 2828 |
| AcuI | CTGAAG | 9 cut(s) | 326, 758, 902, 1521, 2042, 2342, 2405, 2489, 2964 |
| AcyI | GRCGYC | 1 cut(s) | 722 |
| AfaI | GTAC | 8 cut(s) | 322, 1345, 1424, 2152, 2404, 2630, 2682, 2912 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 648, 688, 1099, 1868, 2326, 2518, 3170, 3245 |
| AflII | CTTAAG | 1 cut(s) | 3218 |
| AflIII | ACRYGT | 2 cut(s) | 279, 468 |
| AgeI | ACCGGT | 1 cut(s) | 3245 |
| AjiI | CACGTC | 1 cut(s) | 469 |
| AjnI | CCWGG | 5 cut(s) | 702, 1254, 1999, 2547, 2789 |
| AleI | CACNNNNGTG | 2 cut(s) | 266, 2636 |
| AloI | GAACNNNNNNTCC | 4 cut(s) | 401, 433, 777, 809 |
| Alw21I | GWGCWC | 3 cut(s) | 84, 1012, 1949 |
| Alw26I | GTCTC | 7 cut(s) | 279, 496, 804, 849, 2021, 2714, 2929 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 2678 |
| Ama87I | CYCGRG | 1 cut(s) | 1635 |
| ApoI | RAATTY | 4 cut(s) | 428, 922, 2072, 2828 |
| AseI | ATTAAT | 1 cut(s) | 3107 |
| AsiGI | ACCGGT | 1 cut(s) | 3245 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 413, 2135, 3174 |
| AspLEI | GCGC | 3 cut(s) | 182, 190, 567 |
| AspS9I | GGNCC | 8 cut(s) | 700, 1081, 1954, 2208, 2509, 2551, 2690, 3553 |
| AsuC2I | CCSGG | 4 cut(s) | 113, 244, 758, 3118 |
| AvaI | CYCGRG | 1 cut(s) | 1635 |
| AvaII | GGWCC | 4 cut(s) | 1954, 2509, 2551, 2690 |
| AxyI | CCTNAGG | 1 cut(s) | 329 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 932, 965 |
| BanI | GGYRCC | 1 cut(s) | 3113 |
| BanII | GRGCYC | 2 cut(s) | 84, 1949 |
| BauI | CACGAG | 3 cut(s) | 83, 221, 2973 |
| Bbv12I | GWGCWC | 3 cut(s) | 84, 1012, 1949 |
| BbvCI | CCTCAGC | 1 cut(s) | 534 |
| BbvI | GCAGC | 9 cut(s) | 143, 854, 861, 1045, 1477, 2450, 2473, 3236, 3556 |
| BccI | CCATC | 6 cut(s) | 911, 1457, 3089, 3275, 3497, 3544 |
| BceAI | ACGGC | 4 cut(s) | 41, 279, 597, 709 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 127, 161 |
| BciT130I | CCWGG | 5 cut(s) | 704, 1256, 2001, 2549, 2791 |
| BciVI | GTATCC | 2 cut(s) | 933, 2555 |
| BclI | TGATCA | 2 cut(s) | 48, 2199 |
| BcnI | CCSGG | 4 cut(s) | 113, 244, 758, 3118 |
| BcoDI | GTCTC | 7 cut(s) | 279, 496, 804, 849, 2021, 2714, 2929 |
| BfaI | CTAG | 8 cut(s) | 125, 998, 2190, 2598, 2813, 2960, 3125, 3494 |
| BfmI | CTRYAG | 5 cut(s) | 171, 789, 1248, 1596, 1823 |
| BfoI | RGCGCY | 1 cut(s) | 191 |
| BfrI | CTTAAG | 1 cut(s) | 3218 |
| BfuAI | ACCTGC | 2 cut(s) | 777, 2773 |
| BfuI | GTATCC | 2 cut(s) | 933, 2555 |
| BlpI | GCTNAGC | 1 cut(s) | 3571 |
| BmcAI | AGTACT | 3 cut(s) | 1424, 2404, 2912 |
| Bme1390I | CCNGG | 9 cut(s) | 113, 244, 704, 758, 1256, 2001, 2549, 2791, 3118 |
| Bme18I | GGWCC | 4 cut(s) | 1954, 2509, 2551, 2690 |
| BmeT110I | CYCGRG | 1 cut(s) | 1635 |
| BmgBI | CACGTC | 1 cut(s) | 469 |
| BmgT120I | GGNCC | 8 cut(s) | 700, 1081, 1954, 2208, 2509, 2551, 2690, 3553 |
| BmiI | GGNNCC | 5 cut(s) | 1956, 2654, 3042, 3115, 3162 |
| BmrFI | CCNGG | 9 cut(s) | 113, 244, 704, 758, 1256, 2001, 2549, 2791, 3118 |
| BmsI | GCATC | 7 cut(s) | 157, 472, 895, 901, 1582, 3525, 3531 |
| BplI | GAGNNNNNCTC | 4 cut(s) | 167, 199, 2150, 2182 |
| BpmI | CTGGAG | 1 cut(s) | 3610 |
| Bpu10I | CCTNAGC | 2 cut(s) | 534, 846 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 3571 |
| BpuEI | CTTGAG | 3 cut(s) | 1106, 1251, 2632 |
| BpuMI | CCSGG | 4 cut(s) | 113, 244, 758, 3118 |
| Bsa29I | ATCGAT | 2 cut(s) | 615, 953 |
| BsaHI | GRCGYC | 1 cut(s) | 722 |
| BsaI | GGTCTC | 1 cut(s) | 2021 |
| BsaWI | WCCGGW | 1 cut(s) | 3245 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 648, 688, 1099, 1868, 2326, 2518, 3170, 3245 |
| Bse118I | RCCGGY | 2 cut(s) | 2983, 3245 |
| Bse1I | ACTGG | 2 cut(s) | 2091, 2523 |
| Bse21I | CCTNAGG | 1 cut(s) | 329 |
| Bse3DI | GCAATG | 1 cut(s) | 2572 |
| BseBI | CCWGG | 5 cut(s) | 704, 1256, 2001, 2549, 2791 |
| BseCI | ATCGAT | 2 cut(s) | 615, 953 |
| BseGI | GGATG | 9 cut(s) | 834, 964, 1448, 1468, 2202, 2618, 2938, 3457, 3555 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 648, 688, 1099, 1868, 2326, 2518, 3170, 3245 |
| BseMI | GCAATG | 1 cut(s) | 2572 |
| BseNI | ACTGG | 2 cut(s) | 2091, 2523 |
| BseRI | GAGGAG | 3 cut(s) | 867, 1467, 1679 |
| BseX3I | CGGCCG | 1 cut(s) | 109 |
| BseXI | GCAGC | 9 cut(s) | 143, 854, 861, 1045, 1477, 2450, 2473, 3236, 3556 |
| BsgI | GTGCAG | 4 cut(s) | 861, 1168, 2886, 3050 |
| Bsh1236I | CGCG | 3 cut(s) | 134, 281, 567 |
| Bsh1285I | CGRYCG | 3 cut(s) | 29, 112, 132 |
| BshNI | GGYRCC | 1 cut(s) | 3113 |
| BshTI | ACCGGT | 1 cut(s) | 3245 |
| BshVI | ATCGAT | 2 cut(s) | 615, 953 |
| BsiEI | CGRYCG | 3 cut(s) | 29, 112, 132 |
| BsiHKAI | GWGCWC | 3 cut(s) | 84, 1012, 1949 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1635 |
| BsiSI | CCGG | 7 cut(s) | 112, 243, 757, 2206, 2984, 3117, 3246 |
| BslFI | GGGAC | 1 cut(s) | 2743 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 648, 688, 1099, 1868, 2326, 2518, 3170, 3245 |
| BsmAI | GTCTC | 7 cut(s) | 279, 496, 804, 849, 2021, 2714, 2929 |
| BsmBI | CGTCTC | 1 cut(s) | 849 |
| BsmFI | GGGAC | 1 cut(s) | 2743 |
| BsmI | GAATGC | 2 cut(s) | 683, 2916 |
| Bso31I | GGTCTC | 1 cut(s) | 2021 |
| BsoBI | CYCGRG | 1 cut(s) | 1635 |
| Bsp1286I | GDGCHC | 3 cut(s) | 84, 1012, 1949 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 3571 |
| Bsp19I | CCATGG | 1 cut(s) | 2686 |
| BspDI | ATCGAT | 2 cut(s) | 615, 953 |
| BspFNI | CGCG | 3 cut(s) | 134, 281, 567 |
| BspHI | TCATGA | 1 cut(s) | 2380 |
| BspLI | GGNNCC | 5 cut(s) | 1956, 2654, 3042, 3115, 3162 |
| BspMAI | CTGCAG | 1 cut(s) | 1827 |
| BspMI | ACCTGC | 2 cut(s) | 777, 2773 |
| BspQI | GCTCTTC | 2 cut(s) | 785, 936 |
| BspT107I | GGYRCC | 1 cut(s) | 3113 |
| BspTI | CTTAAG | 1 cut(s) | 3218 |
| BspTNI | GGTCTC | 1 cut(s) | 2021 |
| BsrDI | GCAATG | 1 cut(s) | 2572 |
| BsrFI | RCCGGY | 2 cut(s) | 2983, 3245 |
| BsrI | ACTGG | 2 cut(s) | 2091, 2523 |
| BssAI | RCCGGY | 2 cut(s) | 2983, 3245 |
| BssNAI | GTATAC | 1 cut(s) | 3009 |
| BssNI | GRCGYC | 1 cut(s) | 722 |
| BssSI | CACGAG | 3 cut(s) | 83, 221, 2973 |
| BssT1I | CCWWGG | 5 cut(s) | 420, 522, 1404, 1894, 2686 |
| Bst1107I | GTATAC | 1 cut(s) | 3009 |
| Bst2BI | CACGAG | 3 cut(s) | 83, 221, 2973 |
| Bst2UI | CCWGG | 5 cut(s) | 704, 1256, 2001, 2549, 2791 |
| Bst4CI | ACNGT | 7 cut(s) | 344, 360, 1303, 2155, 3065, 3262, 3310 |
| Bst6I | CTCTTC | 5 cut(s) | 785, 936, 1566, 2050, 2604 |
| BstACI | GRCGYC | 1 cut(s) | 722 |
| BstAFI | CTTAAG | 1 cut(s) | 3218 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2864 |
| BstC8I | GCNNGC | 1 cut(s) | 1692 |
| BstDSI | CCRYGG | 1 cut(s) | 2686 |
| BstENI | CCTNNNNNAGG | 2 cut(s) | 1866, 3168 |
| BstF5I | GGATG | 9 cut(s) | 834, 964, 1448, 1468, 2202, 2618, 2938, 3457, 3555 |
| BstFNI | CGCG | 3 cut(s) | 134, 281, 567 |
| BstH2I | RGCGCY | 1 cut(s) | 191 |
| BstHHI | GCGC | 3 cut(s) | 182, 190, 567 |
| BstMAI | GTCTC | 7 cut(s) | 279, 496, 804, 849, 2021, 2714, 2929 |
| BstMCI | CGRYCG | 3 cut(s) | 29, 112, 132 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 539, 1682, 1691, 2483, 2774, 2864, 3137, 3544 |
| BstNI | CCWGG | 5 cut(s) | 704, 1256, 2001, 2549, 2791 |
| BstNSI | RCATGY | 1 cut(s) | 1914 |
| BstSCI | CCNGG | 9 cut(s) | 111, 242, 702, 756, 1254, 1999, 2547, 2789, 3116 |
| BstSFI | CTRYAG | 5 cut(s) | 171, 789, 1248, 1596, 1823 |
| BstUI | CGCG | 3 cut(s) | 134, 281, 567 |
| BstV1I | GCAGC | 9 cut(s) | 143, 854, 861, 1045, 1477, 2450, 2473, 3236, 3556 |
| BstX2I | RGATCY | 3 cut(s) | 1089, 2674, 3121 |
| BstYI | RGATCY | 3 cut(s) | 1089, 2674, 3121 |
| BstZ17I | GTATAC | 1 cut(s) | 3009 |
| BstZI | CGGCCG | 1 cut(s) | 109 |
| Bsu15I | ATCGAT | 2 cut(s) | 615, 953 |
| Bsu36I | CCTNAGG | 1 cut(s) | 329 |
| BsuI | GTATCC | 2 cut(s) | 933, 2555 |
| BsuTUI | ATCGAT | 2 cut(s) | 615, 953 |
| BtgI | CCRYGG | 1 cut(s) | 2686 |
| BtrI | CACGTC | 1 cut(s) | 469 |
| BtsCI | GGATG | 9 cut(s) | 834, 964, 1448, 1468, 2202, 2618, 2938, 3457, 3555 |
| BtsI | GCAGTG | 1 cut(s) | 1820 |
| BtsIMutI | CAGTG | 9 cut(s) | 1185, 1299, 1545, 1590, 1820, 2125, 2516, 3070, 3528 |
| BveI | ACCTGC | 2 cut(s) | 777, 2773 |
| Cac8I | GCNNGC | 1 cut(s) | 1692 |
| CaiI | CAGNNNCTG | 1 cut(s) | 2678 |
| CciI | TCATGA | 1 cut(s) | 2380 |
| CfoI | GCGC | 3 cut(s) | 182, 190, 567 |
| Cfr10I | RCCGGY | 2 cut(s) | 2983, 3245 |
| Cfr13I | GGNCC | 8 cut(s) | 700, 1081, 1954, 2208, 2509, 2551, 2690, 3553 |
| ClaI | ATCGAT | 2 cut(s) | 615, 953 |
| CseI | GACGC | 4 cut(s) | 123, 730, 936, 3475 |
| Csp6I | GTAC | 8 cut(s) | 321, 1344, 1423, 2151, 2403, 2629, 2681, 2911 |
| CspAI | ACCGGT | 1 cut(s) | 3245 |
| CviQI | GTAC | 8 cut(s) | 321, 1344, 1423, 2151, 2403, 2629, 2681, 2911 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 2190 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 2190 |
| EaeI | YGGCCR | 3 cut(s) | 109, 709, 735 |
| EagI | CGGCCG | 1 cut(s) | 109 |
| Eam1104I | CTCTTC | 5 cut(s) | 785, 936, 1566, 2050, 2604 |
| EarI | CTCTTC | 5 cut(s) | 785, 936, 1566, 2050, 2604 |
| Ecl136II | GAGCTC | 2 cut(s) | 82, 1947 |
| EclXI | CGGCCG | 1 cut(s) | 109 |
| Eco130I | CCWWGG | 5 cut(s) | 420, 522, 1404, 1894, 2686 |
| Eco147I | AGGCCT | 2 cut(s) | 1322, 2224 |
| Eco24I | GRGCYC | 2 cut(s) | 84, 1949 |
| Eco31I | GGTCTC | 1 cut(s) | 2021 |
| Eco47I | GGWCC | 4 cut(s) | 1954, 2509, 2551, 2690 |
| Eco52I | CGGCCG | 1 cut(s) | 109 |
| Eco53kI | GAGCTC | 2 cut(s) | 82, 1947 |
| Eco57I | CTGAAG | 9 cut(s) | 326, 758, 902, 1521, 2042, 2342, 2405, 2489, 2964 |
| Eco81I | CCTNAGG | 1 cut(s) | 329 |
| Eco88I | CYCGRG | 1 cut(s) | 1635 |
| EcoICRI | GAGCTC | 2 cut(s) | 82, 1947 |
| EcoNI | CCTNNNNNAGG | 2 cut(s) | 1866, 3168 |
| EcoO109I | RGGNCCY | 4 cut(s) | 1081, 1954, 2509, 2551 |
| EcoRII | CCWGG | 5 cut(s) | 702, 1254, 1999, 2547, 2789 |
| EcoT14I | CCWWGG | 5 cut(s) | 420, 522, 1404, 1894, 2686 |
| EcoT22I | ATGCAT | 1 cut(s) | 3214 |
| EcoT38I | GRGCYC | 2 cut(s) | 84, 1949 |
| ErhI | CCWWGG | 5 cut(s) | 420, 522, 1404, 1894, 2686 |
| Esp3I | CGTCTC | 1 cut(s) | 849 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 679, 711 |
| FaqI | GGGAC | 1 cut(s) | 2743 |
| FauI | CCCGC | 1 cut(s) | 2434 |
| FauNDI | CATATG | 1 cut(s) | 2171 |
| FbaI | TGATCA | 2 cut(s) | 48, 2199 |
| FblI | GTMKAC | 3 cut(s) | 60, 2182, 3008 |
| FokI | GGATG | 9 cut(s) | 821, 951, 1455, 1475, 2189, 2605, 2925, 3444, 3562 |
| FriOI | GRGCYC | 2 cut(s) | 84, 1949 |
| FspBI | CTAG | 8 cut(s) | 125, 998, 2190, 2598, 2813, 2960, 3125, 3494 |
| GlaI | GCGC | 3 cut(s) | 181, 189, 566 |
| GsuI | CTGGAG | 1 cut(s) | 3610 |
| HaeII | RGCGCY | 1 cut(s) | 191 |
| HapII | CCGG | 7 cut(s) | 112, 243, 757, 2206, 2984, 3117, 3246 |
| HgaI | GACGC | 4 cut(s) | 123, 730, 936, 3475 |
| HhaI | GCGC | 3 cut(s) | 182, 190, 567 |
| Hin1I | GRCGYC | 1 cut(s) | 722 |
| Hin6I | GCGC | 3 cut(s) | 180, 188, 565 |
| HinP1I | GCGC | 3 cut(s) | 180, 188, 565 |
| HincII | GTYRAC | 2 cut(s) | 1041, 1393 |
| HindII | GTYRAC | 2 cut(s) | 1041, 1393 |
| HindIII | AAGCTT | 2 cut(s) | 1413, 3401 |
| HpaI | GTTAAC | 1 cut(s) | 1393 |
| HpaII | CCGG | 7 cut(s) | 112, 243, 757, 2206, 2984, 3117, 3246 |
| Hpy166II | GTNNAC | 9 cut(s) | 61, 226, 666, 1041, 1393, 1543, 2183, 2631, 3009 |
| Hpy8I | GTNNAC | 9 cut(s) | 61, 226, 666, 1041, 1393, 1543, 2183, 2631, 3009 |
| Hpy99I | CGWCG | 4 cut(s) | 139, 470, 599, 724 |
| HpyCH4III | ACNGT | 7 cut(s) | 344, 360, 1303, 2155, 3065, 3262, 3310 |
| HpyCH4IV | ACGT | 5 cut(s) | 468, 1230, 1701, 2179, 3521 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 539, 1682, 1691, 2483, 2774, 2864, 3137, 3544 |
| HpySE526I | ACGT | 5 cut(s) | 468, 1230, 1701, 2179, 3521 |
| Hsp92I | GRCGYC | 1 cut(s) | 722 |
| HspAI | GCGC | 3 cut(s) | 180, 188, 565 |
| Ksp22I | TGATCA | 2 cut(s) | 48, 2199 |
| KspAI | GTTAAC | 1 cut(s) | 1393 |
| LguI | GCTCTTC | 2 cut(s) | 785, 936 |
| LmnI | GCTCC | 6 cut(s) | 147, 209, 759, 785, 1466, 3614 |
| Lsp1109I | GCAGC | 9 cut(s) | 143, 854, 861, 1045, 1477, 2450, 2473, 3236, 3556 |
| LweI | GCATC | 7 cut(s) | 157, 472, 895, 901, 1582, 3525, 3531 |
| MaeI | CTAG | 8 cut(s) | 125, 998, 2190, 2598, 2813, 2960, 3125, 3494 |
| MaeII | ACGT | 5 cut(s) | 468, 1230, 1701, 2179, 3521 |
| MfeI | CAATTG | 1 cut(s) | 2433 |
| MflI | RGATCY | 3 cut(s) | 1089, 2674, 3121 |
| MhlI | GDGCHC | 3 cut(s) | 84, 1012, 1949 |
| MluI | ACGCGT | 1 cut(s) | 279 |
| MlyI | GAGTC | 8 cut(s) | 16, 52, 96, 161, 281, 1486, 1538, 2229 |
| MmeI | TCCRAC | 5 cut(s) | 342, 369, 606, 1080, 1501 |
| Mph1103I | ATGCAT | 1 cut(s) | 3214 |
| MroXI | GAANNNNTTC | 3 cut(s) | 413, 2135, 3174 |
| MslI | CAYNNNNRTG | 4 cut(s) | 266, 1485, 2636, 3533 |
| MspA1I | CMGCKG | 7 cut(s) | 198, 874, 1907, 2441, 2477, 3547, 3588 |
| MspCI | CTTAAG | 1 cut(s) | 3218 |
| MspI | CCGG | 7 cut(s) | 112, 243, 757, 2206, 2984, 3117, 3246 |
| MspR9I | CCNGG | 9 cut(s) | 113, 244, 704, 758, 1256, 2001, 2549, 2791, 3118 |
| MunI | CAATTG | 1 cut(s) | 2433 |
| Mva1269I | GAATGC | 2 cut(s) | 683, 2916 |
| MvaI | CCWGG | 5 cut(s) | 704, 1256, 2001, 2549, 2791 |
| MvnI | CGCG | 3 cut(s) | 134, 281, 567 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 539, 1682, 1691, 2483, 2774, 2864, 3137, 3544 |
| NciI | CCSGG | 4 cut(s) | 113, 244, 758, 3118 |
| NcoI | CCATGG | 1 cut(s) | 2686 |
| NdeI | CATATG | 1 cut(s) | 2171 |
| NlaIV | GGNNCC | 5 cut(s) | 1956, 2654, 3042, 3115, 3162 |
| NmeAIII | GCCGAG | 5 cut(s) | 60, 84, 103, 164, 628 |
| NsiI | ATGCAT | 1 cut(s) | 3214 |
| NspI | RCATGY | 1 cut(s) | 1914 |
| OliI | CACNNNNGTG | 2 cut(s) | 266, 2636 |
| PaeR7I | CTCGAG | 1 cut(s) | 1635 |
| PagI | TCATGA | 1 cut(s) | 2380 |
| PaqCI | CACCTGC | 1 cut(s) | 2773 |
| PasI | CCCWGGG | 1 cut(s) | 703 |
| PceI | AGGCCT | 2 cut(s) | 1322, 2224 |
| PciSI | GCTCTTC | 2 cut(s) | 785, 936 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 26, 234, 600 |
| PctI | GAATGC | 2 cut(s) | 683, 2916 |
| PdmI | GAANNNNTTC | 3 cut(s) | 413, 2135, 3174 |
| PflFI | GACNNNGTC | 2 cut(s) | 25, 133 |
| PfoI | TCCNGGA | 3 cut(s) | 756, 2547, 2789 |
| PinAI | ACCGGT | 1 cut(s) | 3245 |
| PleI | GAGTC | 8 cut(s) | 16, 51, 96, 161, 280, 1485, 1538, 2229 |
| PpsI | GAGTC | 8 cut(s) | 16, 51, 96, 161, 280, 1485, 1538, 2229 |
| PpuMI | RGGWCCY | 3 cut(s) | 1954, 2509, 2551 |
| PshBI | ATTAAT | 1 cut(s) | 3107 |
| PsiI | TTATAA | 2 cut(s) | 686, 3257 |
| Psp124BI | GAGCTC | 2 cut(s) | 84, 1949 |
| Psp5II | RGGWCCY | 3 cut(s) | 1954, 2509, 2551 |
| Psp6I | CCWGG | 5 cut(s) | 702, 1254, 1999, 2547, 2789 |
| PspGI | CCWGG | 5 cut(s) | 702, 1254, 1999, 2547, 2789 |
| PspN4I | GGNNCC | 5 cut(s) | 1956, 2654, 3042, 3115, 3162 |
| PspPI | GGNCC | 8 cut(s) | 700, 1081, 1954, 2208, 2509, 2551, 2690, 3553 |
| PspPPI | RGGWCCY | 3 cut(s) | 1954, 2509, 2551 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 2245, 2277 |
| PstI | CTGCAG | 1 cut(s) | 1827 |
| PstNI | CAGNNNCTG | 1 cut(s) | 2678 |
| PsuI | RGATCY | 3 cut(s) | 1089, 2674, 3121 |
| PsyI | GACNNNGTC | 2 cut(s) | 25, 133 |
| PvuII | CAGCTG | 3 cut(s) | 874, 2477, 3588 |
| RsaI | GTAC | 8 cut(s) | 322, 1345, 1424, 2152, 2404, 2630, 2682, 2912 |
| RsaNI | GTAC | 8 cut(s) | 321, 1344, 1423, 2151, 2403, 2629, 2681, 2911 |
| RseI | CAYNNNNRTG | 4 cut(s) | 266, 1485, 2636, 3533 |
| SacI | GAGCTC | 2 cut(s) | 84, 1949 |
| SapI | GCTCTTC | 2 cut(s) | 785, 936 |
| Sau96I | GGNCC | 8 cut(s) | 700, 1081, 1954, 2208, 2509, 2551, 2690, 3553 |
| ScaI | AGTACT | 3 cut(s) | 1424, 2404, 2912 |
| SchI | GAGTC | 8 cut(s) | 16, 52, 96, 161, 281, 1486, 1538, 2229 |
| ScrFI | CCNGG | 9 cut(s) | 113, 244, 704, 758, 1256, 2001, 2549, 2791, 3118 |
| SduI | GDGCHC | 3 cut(s) | 84, 1012, 1949 |
| SfaNI | GCATC | 7 cut(s) | 157, 472, 895, 901, 1582, 3525, 3531 |
| SfcI | CTRYAG | 5 cut(s) | 171, 789, 1248, 1596, 1823 |
| Sfr274I | CTCGAG | 1 cut(s) | 1635 |
| SinI | GGWCC | 4 cut(s) | 1954, 2509, 2551, 2690 |
| SlaI | CTCGAG | 1 cut(s) | 1635 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 266, 1485, 2636, 3533 |
| SmlI | CTYRAG | 5 cut(s) | 1085, 1266, 1635, 2647, 3218 |
| SmoI | CTYRAG | 5 cut(s) | 1085, 1266, 1635, 2647, 3218 |
| SseBI | AGGCCT | 2 cut(s) | 1322, 2224 |
| SspI | AATATT | 2 cut(s) | 2345, 2902 |
| SspMI | CTAG | 8 cut(s) | 125, 998, 2190, 2598, 2813, 2960, 3125, 3494 |
| SstI | GAGCTC | 2 cut(s) | 84, 1949 |
| StuI | AGGCCT | 2 cut(s) | 1322, 2224 |
| StyD4I | CCNGG | 9 cut(s) | 111, 242, 702, 756, 1254, 1999, 2547, 2789, 3116 |
| StyI | CCWWGG | 5 cut(s) | 420, 522, 1404, 1894, 2686 |
| TaaI | ACNGT | 7 cut(s) | 344, 360, 1303, 2155, 3065, 3262, 3310 |
| TaiI | ACGT | 5 cut(s) | 471, 1233, 1704, 2182, 3524 |
| TaqII | GACCGA | 2 cut(s) | 15, 3375 |
| TatI | WGTACW | 5 cut(s) | 1343, 1422, 2402, 2680, 2910 |
| TauI | GCSGC | 7 cut(s) | 111, 256, 602, 711, 737, 1910, 3131 |
| TscAI | CASTG | 9 cut(s) | 1192, 1306, 1545, 1590, 1827, 2125, 2523, 3070, 3535 |
| TspGWI | ACGGA | 6 cut(s) | 610, 827, 1145, 3170, 3335, 3396 |
| TspRI | CASTG | 9 cut(s) | 1192, 1306, 1545, 1590, 1827, 2125, 2523, 3070, 3535 |
| Tth111I | GACNNNGTC | 2 cut(s) | 25, 133 |
| Vha464I | CTTAAG | 1 cut(s) | 3218 |
| VpaK11BI | GGWCC | 4 cut(s) | 1954, 2509, 2551, 2690 |
| VspI | ATTAAT | 1 cut(s) | 3107 |
| XagI | CCTNNNNNAGG | 2 cut(s) | 1866, 3168 |
| XapI | RAATTY | 4 cut(s) | 428, 922, 2072, 2828 |
| XbaI | TCTAGA | 1 cut(s) | 997 |
| XceI | RCATGY | 1 cut(s) | 1914 |
| XhoI | CTCGAG | 1 cut(s) | 1635 |
| XmiI | GTMKAC | 3 cut(s) | 60, 2182, 3008 |
| XmnI | GAANNNNTTC | 3 cut(s) | 413, 2135, 3174 |
| XspI | CTAG | 8 cut(s) | 125, 998, 2190, 2598, 2813, 2960, 3125, 3494 |
| ZrmI | AGTACT | 3 cut(s) | 1424, 2404, 2912 |
| Zsp2I | ATGCAT | 1 cut(s) | 3214 |