Rh2BG629100

OST-HTH/LOTUS domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
OG0000679
Physical Location & Seq
Forward (+)
85096049 .. 85105032
8984 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG629100.1

Sequence Viewer

Length: 2145 bp
ATGAAGCGGCTCGACGGCGACGCCCTAAACCGAGCTACGGCGTCGAAGCTCCTTCACCTCTGCTGCAAGTTTGACTCGGCGGAGTGCGCCTCTGCTCTTCTCGGCAGAGAACTCAGGATGATTCCTTTAGTGAGCGAGTTGGACGACATGGGGAAATCGCCTCTACACACGGCAGCGTTGGCTCACGAGCCGTGGTGCGTGGAGCGAGGAGATGGAGGTGTTATCCAGCTGCTTCTGAAGACAAATATACATGTCAACGATGCTGATGCAGATGGAAATTCTGCTCTTCATTGGATACTTGGGTTGTCGAGATTATCGTGTCCACTACAGATAAGAATTGTATTGCTTCTTATTGAGCATGGCGCCCTAGTAAGCCAAAGGAATAAATTGGGGTTGACAGCATTTCATAATGCTGCCGGTAATGGTAATGCTGAGGCCCTTGAGGTCCTTCTGTTGGAAGACCCAGACGGACTGCAGTATATGACGGAAATGAAAGAAACCCCTCTGTTTTTCTCTGTGAAGAATGAGAGTGAGGACTGTGCTAAGGTTCTTTTGACCTGGGGAGCAAATAGTGAAGTCCTTAATCTACGTACGCAAAGAGCTATAGACCTGGCAACCTCTCAAGAGATGCGTTACATATTGCTGAATCCAACCACTATTAGCCTTATTAATGATGCCTTCCCCTATCAACTTAAATTTGTTACCGCTGTGAATGCTAGAAATGTCAACTCAAGCACCAAGGCAGACGTTTGTAAGTACTTCAACCGTCATCAAGGATGTGTCAGAGGATCAAAGTGCTTTAATTCACATTGTGAGGAGTCTCAGAAAGTGAAGGAGGGAGAAGACAGGAATCATTCTTCTGCTGCTAAACTACTCAAACGCATAATCTTTGTTGGAAGACTTCCTCCTTCAGTGGACTCTGATGCTTTGAGAAAGCTCTGTGAAGAAGAGTTTGGATCAGTGGAAGATGCTGTAGTCATTGTAACTCAAATAGAAAACAAGATACAATCTCGAGGCTTTGGTTTTGTCACATTTAGAGGGGAGAAATCTGCTTCAGAAGCCATGCTAGCGCGCTACATCACCTTGAGAGGCAAGAAAGTTGAAATAAAAAGTTTGATTCCAAAATTGGTTTTGGGAGCTGACCTTGAGAAAATGTCACCTCAACCACAAGATCAAGAGAAGAGTTTTCAATACCAGCTTCCACTGCAGAAGCCGAACGAGAATATTGTGGAAGGTGATAACCCTGAACAAAGTTCTTGGGCTGATAGATTAGTCCTTAAACAACCAGCAGATTGTTCCATTGAACCTCAAGCACATGTTACCAAGAGCTCTGAGGACCCAAGCACTCCTACATGGCTAAAGGTTTTCAACAAGTGGTTTCCTGGGATCTTACAAGTAAGTAAACGTGCCCTTATTGTGAATGGTGGTGATTCAAAGTGTCTTTCATCCCTCTTAAGTGGCAATGGTGGTGATTTAAAGGATCTTCAGAACCTTTCAACTGACAGCGGTAGTGATGAGAAGTGTCTCCAGGACCTTCCAACTAACAATGCTATTGATTCAAAGTGCCTTCAGGACCTTTCACTTGATTCTGGTGGTGATTCAGAGTGTGTTGGAGACGAAATGTATGGCTCAAGTGTCACTAGCCATGGGGAAGAGAAACCCTCATCTGGGTATCCTGAAATGAACTCTAAACAGGATAAAGCACACTGTTTGCACCCAAGGTTCCTTCAATTCTTGAAGCTAGATCCTCTACTCCATGGTCAGAATGATATTGATGTGCTTGCTGGAGAGAGTGACAATGAAAAAGGACAGTGCAATGCAGGAGATAAGAATACAAGCGAATCATATTTCCTTCATGAATCTGATTCTTGCAAGGTTAAAGGCATTACAAACATTGCATGGGTTTCAAAAGAGTGTGTAGTCCTTGCCACTGATTCTCGTGGTACTTGCAAAAAGAGTTTAGGCGTCGTTGGTCAGTCAATGGAGAGGGATCCTGATGCCGGTGGTACCATGTTCCTTATTGCTGGATTACAATCAGAGGCTCCAAATTGTTGTTTTCTGTACGATCTCTTTAAAGAGAAGGAAGACCGTGCATGTGGCTTGGAGGAGGTTCCAAATTGGAAGGCAGTTGGTAGTGGCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ank Ank_2 Ank_4 OST-HTH RRM_1

Protein Analysis

714

Amino Acids

78.27

Weight (kDa)

5.35

Isoelectric Point (pI)

43.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Ank_2 PF12796 66 - 151 2.6e-07 Ankyrin repeats (3 copies)
Ank_2 PF12796 112 - 190 2.7e-09 Ankyrin repeats (3 copies)
RRM_1 PF00076 296 - 366 2.1e-11 RNA recognition motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 2006
AccB1I GGYRCC 2 cut(s) 362, 2006
AccII CGCG 1 cut(s) 1072
AciI CCGC 4 cut(s) 7, 80, 705, 1506
AclWI GGATC 7 cut(s) 796, 964, 1394, 1488, 1739, 1985, 1998
AcsI RAATTY 2 cut(s) 277, 695
AcuI CTGAAG 5 cut(s) 257, 894, 1038, 1469, 1553
AcyI GRCGYC 4 cut(s) 21, 41, 363, 1965
AdeI CACNNNGTG 1 cut(s) 812
AfaI GTAC 5 cut(s) 592, 758, 1945, 2008, 2063
AfiI CCNNNNNNNGG 5 cut(s) 37, 454, 1667, 1668, 2000
AflII CTTAAG 1 cut(s) 1453
AflIII ACRYGT 2 cut(s) 250, 1315
AjnI CCWGG 4 cut(s) 557, 609, 1381, 1527
AjuI GAANNNNNNNTTGG 2 cut(s) 936, 968
AluBI AGCT 9 cut(s) 35, 49, 229, 602, 937, 1139, 1198, 1329, 1741
AluI AGCT 9 cut(s) 35, 49, 229, 602, 937, 1139, 1198, 1329, 1741
Alw21I GWGCWC 1 cut(s) 1331
Alw26I GTCTC 3 cut(s) 825, 1529, 1608
AlwI GGATC 7 cut(s) 796, 964, 1394, 1488, 1739, 1985, 1998
Ama87I CYCGRG 1 cut(s) 1011
AoxI GGCC 1 cut(s) 435
ApeKI GCWGC 5 cut(s) 63, 173, 229, 413, 863
ApoI RAATTY 2 cut(s) 277, 695
AseI ATTAAT 1 cut(s) 669
Asp718I GGTACC 1 cut(s) 2006
AspLEI GCGC 4 cut(s) 89, 365, 1072, 1074
AspS9I GGNCC 5 cut(s) 436, 445, 1336, 1531, 1573
AsuHPI GGTGA 7 cut(s) 47, 1072, 1149, 1247, 1439, 1481, 1607
AsuNHI GCTAGC 1 cut(s) 1066
AvaI CYCGRG 1 cut(s) 1011
AvaII GGWCC 4 cut(s) 445, 1336, 1531, 1573
BaeGI GKGCMC 1 cut(s) 1411
BaeI ACNNNNGTAYC 2 cut(s) 287, 320
BamHI GGATCC 1 cut(s) 1990
BanI GGYRCC 2 cut(s) 362, 2006
BanII GRGCYC 1 cut(s) 1331
BauI CACGAG 2 cut(s) 185, 1938
BbsI GAAGAC 5 cut(s) 245, 465, 849, 904, 2091
Bbv12I GWGCWC 1 cut(s) 1331
BbvCI CCTCAGC 1 cut(s) 432
BbvI GCAGC 5 cut(s) 50, 185, 216, 400, 850
BccI CCATC 2 cut(s) 206, 266
BceAI ACGGC 4 cut(s) 31, 54, 175, 186
BcgI CGANNNNNNTGC 2 cut(s) 248, 282
BciT130I CCWGG 4 cut(s) 559, 611, 1383, 1529
BciVI GTATCC 2 cut(s) 288, 1683
BcoDI GTCTC 3 cut(s) 825, 1529, 1608
BfaI CTAG 5 cut(s) 368, 717, 1067, 1641, 1742
BfmI CTRYAG 5 cut(s) 326, 473, 603, 972, 1205
BfoI RGCGCY 1 cut(s) 366
BfrI CTTAAG 1 cut(s) 1453
BfuI GTATCC 2 cut(s) 288, 1683
BisI GCNGC 6 cut(s) 8, 64, 174, 230, 414, 864
BlsI GCNGC 6 cut(s) 9, 65, 175, 231, 415, 865
BmcAI AGTACT 1 cut(s) 758
Bme1390I CCNGG 4 cut(s) 559, 611, 1383, 1529
Bme18I GGWCC 4 cut(s) 445, 1336, 1531, 1573
BmeT110I CYCGRG 1 cut(s) 1011
BmgT120I GGNCC 5 cut(s) 436, 445, 1336, 1531, 1573
BmiI GGNNCC 7 cut(s) 364, 1338, 1724, 1992, 2008, 2043, 2112
BmrFI CCNGG 4 cut(s) 559, 611, 1383, 1529
BmsI GCATC 7 cut(s) 250, 256, 618, 664, 913, 958, 1987
BmtI GCTAGC 1 cut(s) 1070
BpiI GAAGAC 5 cut(s) 245, 465, 849, 904, 2091
BplI GAGNNNNNCTC 4 cut(s) 74, 106, 1646, 1678
BpmI CTGGAG 2 cut(s) 1511, 1806
Bpu10I CCTNAGC 2 cut(s) 432, 543
BpuEI CTTGAG 7 cut(s) 461, 606, 715, 1105, 1166, 1293, 1615
BsaAI YACGTR 1 cut(s) 590
BsaBI GATNNNNATC 1 cut(s) 2032
BsaHI GRCGYC 4 cut(s) 21, 41, 363, 1965
BsaJI CCNNGG 7 cut(s) 191, 558, 738, 1382, 1645, 1718, 1756
Bsc4I CCNNNNNNNGG 5 cut(s) 37, 454, 1667, 1668, 2000
Bse118I RCCGGY 2 cut(s) 416, 2000
Bse3DI GCAATG 3 cut(s) 1468, 1822, 1893
Bse8I GATNNNNATC 1 cut(s) 2032
BseBI CCWGG 4 cut(s) 559, 611, 1383, 1529
BseDI CCNNGG 7 cut(s) 191, 558, 738, 1382, 1645, 1718, 1756
BseGI GGATG 3 cut(s) 123, 782, 1445
BseJI GATNNNNATC 1 cut(s) 2032
BseLI CCNNNNNNNGG 5 cut(s) 37, 454, 1667, 1668, 2000
BseMI GCAATG 3 cut(s) 1468, 1822, 1893
BseMII CTCAG 4 cut(s) 127, 423, 836, 1323
BsePI GCGCGC 1 cut(s) 1070
BseRI GAGGAG 3 cut(s) 222, 830, 2120
BseSI GKGCMC 1 cut(s) 1411
BseXI GCAGC 5 cut(s) 50, 185, 216, 400, 850
Bsh1236I CGCG 1 cut(s) 1072
BshFI GGCC 1 cut(s) 437
BshNI GGYRCC 2 cut(s) 362, 2006
BsiHKAI GWGCWC 1 cut(s) 1331
BsiHKCI CYCGRG 1 cut(s) 1011
BsiSI CCGG 2 cut(s) 417, 2001
BsiWI CGTACG 1 cut(s) 590
BslI CCNNNNNNNGG 5 cut(s) 37, 454, 1667, 1668, 2000
BsmAI GTCTC 3 cut(s) 825, 1529, 1608
BsmBI CGTCTC 1 cut(s) 1608
BsmI GAATGC 1 cut(s) 718
BsnI GGCC 1 cut(s) 437
BsoBI CYCGRG 1 cut(s) 1011
Bsp1286I GDGCHC 2 cut(s) 1331, 1411
Bsp143I GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
Bsp19I CCATGG 2 cut(s) 1645, 1756
BspACI CCGC 4 cut(s) 7, 80, 705, 1506
BspANI GGCC 1 cut(s) 437
BspCNI CTCAG 4 cut(s) 126, 424, 835, 1324
BspFNI CGCG 1 cut(s) 1072
BspHI TCATGA 1 cut(s) 1855
BspLI GGNNCC 7 cut(s) 364, 1338, 1724, 1992, 2008, 2043, 2112
BspMAI CTGCAG 2 cut(s) 477, 1209
BspOI GCTAGC 1 cut(s) 1070
BspPI GGATC 7 cut(s) 796, 964, 1394, 1488, 1739, 1985, 1998
BspQI GCTCTTC 2 cut(s) 102, 291
BspT107I GGYRCC 2 cut(s) 362, 2006
BspTI CTTAAG 1 cut(s) 1453
BsrDI GCAATG 3 cut(s) 1468, 1822, 1893
BsrFI RCCGGY 2 cut(s) 416, 2000
BssAI RCCGGY 2 cut(s) 416, 2000
BssECI CCNNGG 7 cut(s) 191, 558, 738, 1382, 1645, 1718, 1756
BssHII GCGCGC 1 cut(s) 1070
BssMI GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
BssNI GRCGYC 4 cut(s) 21, 41, 363, 1965
BssSI CACGAG 2 cut(s) 185, 1938
BssT1I CCWWGG 4 cut(s) 738, 1645, 1718, 1756
Bst2BI CACGAG 2 cut(s) 185, 1938
Bst2UI CCWGG 4 cut(s) 559, 611, 1383, 1529
Bst4CI ACNGT 5 cut(s) 539, 767, 1709, 1812, 2090
Bst6I CTCTTC 5 cut(s) 102, 291, 942, 1175, 1647
BstACI GRCGYC 4 cut(s) 21, 41, 363, 1965
BstAFI CTTAAG 1 cut(s) 1453
BstBAI YACGTR 1 cut(s) 590
BstC8I GCNNGC 3 cut(s) 1068, 1072, 1782
BstDEI CTNAG 5 cut(s) 113, 432, 543, 822, 1332
BstDSI CCRYGG 3 cut(s) 191, 1645, 1756
BstF5I GGATG 3 cut(s) 123, 782, 1445
BstFNI CGCG 1 cut(s) 1072
BstH2I RGCGCY 1 cut(s) 366
BstHHI GCGC 4 cut(s) 89, 365, 1072, 1074
BstKTI GATC 8 cut(s) 791, 959, 1174, 1389, 1483, 1747, 1993, 2068
BstMAI GTCTC 3 cut(s) 825, 1529, 1608
BstMBI GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
BstMWI GCNNNNNNNGC 6 cut(s) 86, 179, 713, 1058, 1067, 1204
BstNI CCWGG 4 cut(s) 559, 611, 1383, 1529
BstNSI RCATGY 3 cut(s) 254, 1319, 2097
BstSCI CCNGG 4 cut(s) 557, 609, 1381, 1527
BstSFI CTRYAG 5 cut(s) 326, 473, 603, 972, 1205
BstSLI GKGCMC 1 cut(s) 1411
BstSNI TACGTA 1 cut(s) 590
BstUI CGCG 1 cut(s) 1072
BstV1I GCAGC 5 cut(s) 50, 185, 216, 400, 850
BstV2I GAAGAC 5 cut(s) 245, 465, 849, 904, 2091
BstX2I RGATCY 4 cut(s) 1386, 1480, 1744, 1990
BstYI RGATCY 4 cut(s) 1386, 1480, 1744, 1990
BsuI GTATCC 2 cut(s) 288, 1683
BsuRI GGCC 1 cut(s) 437
BtgI CCRYGG 3 cut(s) 191, 1645, 1756
BtsCI GGATG 3 cut(s) 123, 782, 1445
BtsI GCAGTG 1 cut(s) 1202
BtsIMutI CAGTG 6 cut(s) 918, 966, 1202, 1705, 1817, 1929
Cac8I GCNNGC 3 cut(s) 1068, 1072, 1782
CciI TCATGA 1 cut(s) 1855
CfoI GCGC 4 cut(s) 89, 365, 1072, 1074
Cfr10I RCCGGY 2 cut(s) 416, 2000
Cfr13I GGNCC 5 cut(s) 436, 445, 1336, 1531, 1573
CseI GACGC 3 cut(s) 29, 30, 1954
Csp6I GTAC 5 cut(s) 591, 757, 1944, 2007, 2062
CviQI GTAC 5 cut(s) 591, 757, 1944, 2007, 2062
DdeI CTNAG 5 cut(s) 113, 432, 543, 822, 1332
DinI GGCGCC 1 cut(s) 364
DpnI GATC 8 cut(s) 790, 958, 1173, 1388, 1482, 1746, 1992, 2067
DpnII GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
DraI TTTAAA 2 cut(s) 1476, 2074
DraIII CACNNNGTG 1 cut(s) 812
Eam1104I CTCTTC 5 cut(s) 102, 291, 942, 1175, 1647
EarI CTCTTC 5 cut(s) 102, 291, 942, 1175, 1647
EciI GGCGGA 1 cut(s) 95
Ecl136II GAGCTC 1 cut(s) 1329
Eco105I TACGTA 1 cut(s) 590
Eco130I CCWWGG 4 cut(s) 738, 1645, 1718, 1756
Eco24I GRGCYC 1 cut(s) 1331
Eco47I GGWCC 4 cut(s) 445, 1336, 1531, 1573
Eco53kI GAGCTC 1 cut(s) 1329
Eco57I CTGAAG 5 cut(s) 257, 894, 1038, 1469, 1553
Eco88I CYCGRG 1 cut(s) 1011
EcoICRI GAGCTC 1 cut(s) 1329
EcoO109I RGGNCCY 5 cut(s) 436, 445, 1336, 1531, 1573
EcoRII CCWGG 4 cut(s) 557, 609, 1381, 1527
EcoT14I CCWWGG 4 cut(s) 738, 1645, 1718, 1756
EcoT38I GRGCYC 1 cut(s) 1331
EgeI GGCGCC 1 cut(s) 364
EheI GGCGCC 1 cut(s) 364
ErhI CCWWGG 4 cut(s) 738, 1645, 1718, 1756
Esp3I CGTCTC 1 cut(s) 1608
Fnu4HI GCNGC 6 cut(s) 8, 64, 174, 230, 414, 864
FokI GGATG 3 cut(s) 130, 789, 1432
FriOI GRGCYC 1 cut(s) 1331
Fsp4HI GCNGC 6 cut(s) 8, 64, 174, 230, 414, 864
FspBI CTAG 5 cut(s) 368, 717, 1067, 1641, 1742
GlaI GCGC 4 cut(s) 88, 364, 1071, 1073
GluI GCNGC 6 cut(s) 8, 64, 174, 230, 414, 864
GsuI CTGGAG 2 cut(s) 1511, 1806
HaeII RGCGCY 1 cut(s) 366
HaeIII GGCC 1 cut(s) 437
HapII CCGG 2 cut(s) 417, 2001
HgaI GACGC 3 cut(s) 29, 30, 1954
HhaI GCGC 4 cut(s) 89, 365, 1072, 1074
Hin1I GRCGYC 4 cut(s) 21, 41, 363, 1965
Hin6I GCGC 4 cut(s) 87, 363, 1070, 1072
HinP1I GCGC 4 cut(s) 87, 363, 1070, 1072
HincII GTYRAC 3 cut(s) 256, 396, 727
HindII GTYRAC 3 cut(s) 256, 396, 727
HpaII CCGG 2 cut(s) 417, 2001
HphI GGTGA 7 cut(s) 47, 1072, 1149, 1247, 1439, 1481, 1607
Hpy166II GTNNAC 6 cut(s) 256, 323, 396, 727, 916, 1403
Hpy8I GTNNAC 6 cut(s) 256, 323, 396, 727, 916, 1403
Hpy99I CGWCG 4 cut(s) 17, 23, 46, 1970
HpyCH4III ACNGT 5 cut(s) 539, 767, 1709, 1812, 2090
HpyCH4IV ACGT 3 cut(s) 589, 747, 1405
HpyF10VI GCNNNNNNNGC 6 cut(s) 86, 179, 713, 1058, 1067, 1204
HpyF3I CTNAG 5 cut(s) 113, 432, 543, 822, 1332
HpySE526I ACGT 3 cut(s) 589, 747, 1405
Hsp92I GRCGYC 4 cut(s) 21, 41, 363, 1965
HspAI GCGC 4 cut(s) 87, 363, 1070, 1072
KasI GGCGCC 1 cut(s) 362
KpnI GGTACC 1 cut(s) 2010
Kzo9I GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
LguI GCTCTTC 2 cut(s) 102, 291
LmnI GCTCC 5 cut(s) 54, 202, 563, 1136, 2047
Lsp1109I GCAGC 5 cut(s) 50, 185, 216, 400, 850
LweI GCATC 7 cut(s) 250, 256, 618, 664, 913, 958, 1987
MaeI CTAG 5 cut(s) 368, 717, 1067, 1641, 1742
MaeII ACGT 3 cut(s) 589, 747, 1405
MaeIII GTNAC 8 cut(s) 632, 700, 982, 1027, 1155, 1318, 1636, 1793
MalI GATC 8 cut(s) 790, 958, 1173, 1388, 1482, 1746, 1992, 2067
MboI GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
MflI RGATCY 4 cut(s) 1386, 1480, 1744, 1990
MhlI GDGCHC 2 cut(s) 1331, 1411
MluCI AATT 9 cut(s) 277, 336, 386, 695, 802, 1124, 1730, 2047, 2116
Mly113I GGCGCC 1 cut(s) 363
MlyI GAGTC 3 cut(s) 68, 827, 911
MmeI TCCRAC 6 cut(s) 120, 435, 674, 874, 1562, 1591
MseI TTAA 9 cut(s) 582, 669, 693, 801, 1278, 1454, 1475, 1878, 2073
MspA1I CMGCKG 3 cut(s) 229, 707, 1506
MspCI CTTAAG 1 cut(s) 1453
MspI CCGG 2 cut(s) 417, 2001
MspR9I CCNGG 4 cut(s) 559, 611, 1383, 1529
Mva1269I GAATGC 1 cut(s) 718
MvaI CCWGG 4 cut(s) 559, 611, 1383, 1529
MvnI CGCG 1 cut(s) 1072
MwoI GCNNNNNNNGC 6 cut(s) 86, 179, 713, 1058, 1067, 1204
NarI GGCGCC 1 cut(s) 363
NcoI CCATGG 2 cut(s) 1645, 1756
NdeII GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
NheI GCTAGC 1 cut(s) 1066
NlaIV GGNNCC 7 cut(s) 364, 1338, 1724, 1992, 2008, 2043, 2112
NmeAIII GCCGAG 2 cut(s) 56, 81
NmuCI GTSAC 4 cut(s) 1027, 1155, 1636, 1793
NspI RCATGY 3 cut(s) 254, 1319, 2097
PaeR7I CTCGAG 1 cut(s) 1011
PagI TCATGA 1 cut(s) 1855
PauI GCGCGC 1 cut(s) 1070
PciI ACATGT 2 cut(s) 250, 1315
PciSI GCTCTTC 2 cut(s) 102, 291
PcsI WCGNNNNNNNCGW 1 cut(s) 314
PctI GAATGC 1 cut(s) 718
Pfl23II CGTACG 1 cut(s) 590
PfoI TCCNGGA 1 cut(s) 1527
PkrI GCNGC 6 cut(s) 9, 65, 175, 231, 415, 865
PleI GAGTC 3 cut(s) 68, 826, 911
PluTI GGCGCC 1 cut(s) 366
PpsI GAGTC 3 cut(s) 68, 826, 911
Ppu21I YACGTR 1 cut(s) 590
PpuMI RGGWCCY 4 cut(s) 445, 1336, 1531, 1573
PscI ACATGT 2 cut(s) 250, 1315
PshBI ATTAAT 1 cut(s) 669
Psp124BI GAGCTC 1 cut(s) 1331
Psp5II RGGWCCY 4 cut(s) 445, 1336, 1531, 1573
Psp6I CCWGG 4 cut(s) 557, 609, 1381, 1527
PspGI CCWGG 4 cut(s) 557, 609, 1381, 1527
PspLI CGTACG 1 cut(s) 590
PspN4I GGNNCC 7 cut(s) 364, 1338, 1724, 1992, 2008, 2043, 2112
PspPI GGNCC 5 cut(s) 436, 445, 1336, 1531, 1573
PspPPI RGGWCCY 4 cut(s) 445, 1336, 1531, 1573
PstI CTGCAG 2 cut(s) 477, 1209
PsuI RGATCY 4 cut(s) 1386, 1480, 1744, 1990
PteI GCGCGC 1 cut(s) 1070
PvuII CAGCTG 1 cut(s) 229
RsaI GTAC 5 cut(s) 592, 758, 1945, 2008, 2063
RsaNI GTAC 5 cut(s) 591, 757, 1944, 2007, 2062
SacI GAGCTC 1 cut(s) 1331
SapI GCTCTTC 2 cut(s) 102, 291
SaqAI TTAA 9 cut(s) 582, 669, 693, 801, 1278, 1454, 1475, 1878, 2073
SatI GCNGC 6 cut(s) 8, 64, 174, 230, 414, 864
Sau3AI GATC 8 cut(s) 788, 956, 1171, 1386, 1480, 1744, 1990, 2065
Sau96I GGNCC 5 cut(s) 436, 445, 1336, 1531, 1573
ScaI AGTACT 1 cut(s) 758
SchI GAGTC 3 cut(s) 68, 827, 911
ScrFI CCNGG 4 cut(s) 559, 611, 1383, 1529
SduI GDGCHC 2 cut(s) 1331, 1411
SfaNI GCATC 7 cut(s) 250, 256, 618, 664, 913, 958, 1987
SfcI CTRYAG 5 cut(s) 326, 473, 603, 972, 1205
SfoI GGCGCC 1 cut(s) 364
Sfr274I CTCGAG 1 cut(s) 1011
SinI GGWCC 4 cut(s) 445, 1336, 1531, 1573
SlaI CTCGAG 1 cut(s) 1011
SmlI CTYRAG 9 cut(s) 440, 621, 730, 1011, 1084, 1145, 1308, 1453, 1630
SmoI CTYRAG 9 cut(s) 440, 621, 730, 1011, 1084, 1145, 1308, 1453, 1630
SnaBI TACGTA 1 cut(s) 590
Sse9I AATT 9 cut(s) 277, 336, 386, 695, 802, 1124, 1730, 2047, 2116
SsiI CCGC 4 cut(s) 7, 80, 705, 1506
SspDI GGCGCC 1 cut(s) 362
SspI AATATT 1 cut(s) 1225
SspMI CTAG 5 cut(s) 368, 717, 1067, 1641, 1742
SstI GAGCTC 1 cut(s) 1331
StyD4I CCNGG 4 cut(s) 557, 609, 1381, 1527
StyI CCWWGG 4 cut(s) 738, 1645, 1718, 1756
TaaI ACNGT 5 cut(s) 539, 767, 1709, 1812, 2090
TaiI ACGT 3 cut(s) 592, 750, 1408
TaqI TCGA 4 cut(s) 12, 44, 308, 1012
TasI AATT 9 cut(s) 277, 336, 386, 695, 802, 1124, 1730, 2047, 2116
TatI WGTACW 1 cut(s) 756
TauI GCSGC 1 cut(s) 10
Tru1I TTAA 9 cut(s) 582, 669, 693, 801, 1278, 1454, 1475, 1878, 2073
Tru9I TTAA 9 cut(s) 582, 669, 693, 801, 1278, 1454, 1475, 1878, 2073
TscAI CASTG 6 cut(s) 918, 966, 1209, 1712, 1817, 1936
TseFI GTSAC 4 cut(s) 1027, 1155, 1636, 1793
TseI GCWGC 5 cut(s) 63, 173, 229, 413, 863
Tsp45I GTSAC 4 cut(s) 1027, 1155, 1636, 1793
TspDTI ATGAA 9 cut(s) 17, 278, 395, 506, 1434, 1697, 1815, 1844, 1872
TspGWI ACGGA 2 cut(s) 483, 500
TspRI CASTG 6 cut(s) 918, 966, 1209, 1712, 1817, 1936
Vha464I CTTAAG 1 cut(s) 1453
VpaK11BI GGWCC 4 cut(s) 445, 1336, 1531, 1573
VspI ATTAAT 1 cut(s) 669
XapI RAATTY 2 cut(s) 277, 695
XceI RCATGY 3 cut(s) 254, 1319, 2097
XhoI CTCGAG 1 cut(s) 1011
XspI CTAG 5 cut(s) 368, 717, 1067, 1641, 1742
ZrmI AGTACT 1 cut(s) 758
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.