Prupe.3G284000_v2.0.a1

Catalyzes the NAD( )-dependent oxidation of formate to carbon dioxide. Involved in the cell stress response

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Reverse (-)
25772071 .. 25775788
3718 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G284000.4

Sequence Viewer

Length: 1191 bp
ATGCGAGTTAGCAGGAAATCCATAAGGAACATGGCGATGAAGGGTGTCATTGCATCTGCCGTTCGAACTCTTGCTTCATCAGGGAGCTCAGCATCATCAACCACCTTCACCAGGCACCTCCATGCATCTGCTGGAAGCAAAAAGATTGTTGGGGTGTTTTACAAGGCCAATGAATATGCAGAACTGAACCCCAATTTTCTGGGTTGTGAGGAGAGAGCGCTGGGCATAAAGGACTGGCTGGAATCACAAGGCCACAAGTATATTGTCACTGATGACAAGGACGGACCAGATTGTGAACTTGACAAACACATTCAAGATCTCCATGTTCTCATATCAACCCCCTTCCATCCTGCCTATGTCACTGCTGAAAGGATCAAAAAGGCCAAGAATTTGCAATTGCTTCTCACGGCCGGAGTTGGTTCTGATCATATTGATCTGAAGGCTGCTGCTGCTGCTGGATTAACAGTTGCAGAGGTCACAGGAAGCAATGTGGTTTCGGTTGCAGAAGACGAGCTCATGAGAATCCTCATTCTTGTGCGGAACTTCGTGCCCGGGTACACTCAGATTGTTAATGGGGAGTGGAAAGTTGCAGGTATTGCCCACAGAGCTTATGATCTGGAAGGAAAGACAGTGGGGACTGTTGGTGCTGGACGTATTGGCAAGCTTTTGCTCCAAAGGTTGAAACCTTTCAACTGTCATCTCCTCTATCATGACCGGTTCAAGATTGACCCAGAATTGGAGCAACAGATAGGGGCTAAGTTTGAGGAGGATCTGGATGCCATGCTTCCAAAATGTGATGTTATTGTTATCAACACACCCCTTACTGAGAAAACAAGAGGGATGTTTGAAAAGATAGAATTAATTGCAAAGTGTAAGAAGGGAGTCCTGATCGTTAACAATGCTCGAGGGGCAATCATGGACACACAGGCAGTTGTTGACGCTTCCTCCAGTGGACATATTGCAGGTTACAGCGGCGATGTTTGGAATCCACAACCAGCTCCGAAAGACCATCCATGGCGTTACATGCCAAACCATGCTATGACCCCTCATATATCTGGTACCACAATTGATGCACAGTTACGTTATGCTGCCGGTGTTAAGGACATGCTTGACAGGTACTTCAAGGGAGAAGACTTTCCTGCACAAAACTACATTGTCAAGGACGGTAAAATAGCAAGCCAGTATCAGTAA

Protein Analysis

397

Amino Acids

43.51

Weight (kDa)

8.41

Isoelectric Point (pI)

26.85

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 581, 953
Acc65I GGTACC 1 cut(s) 1058
AccB1I GGYRCC 2 cut(s) 114, 1058
AciI CCGC 2 cut(s) 538, 972
AclWI GGATC 2 cut(s) 380, 777
AcoI YGGCCR 1 cut(s) 408
AcsI RAATTY 1 cut(s) 388
AcuI CTGAAG 1 cut(s) 458
AfaI GTAC 3 cut(s) 557, 1060, 1118
AfeI AGCGCT 1 cut(s) 219
AfiI CCNNNNNNNGG 2 cut(s) 111, 736
AgeI ACCGGT 1 cut(s) 714
AgsI TTSAA 6 cut(s) 314, 682, 691, 721, 848, 1123
AjnI CCWGG 1 cut(s) 110
AluBI AGCT 5 cut(s) 87, 514, 608, 664, 998
AluI AGCT 5 cut(s) 87, 514, 608, 664, 998
Alw21I GWGCWC 2 cut(s) 89, 516
AlwI GGATC 2 cut(s) 380, 777
Ama87I CYCGRG 2 cut(s) 551, 903
Aor51HI AGCGCT 1 cut(s) 219
AoxI GGCC 4 cut(s) 165, 250, 381, 408
ApeKI GCWGC 5 cut(s) 443, 446, 449, 452, 1088
ApoI RAATTY 1 cut(s) 388
AseI ATTAAT 1 cut(s) 860
AsiGI ACCGGT 1 cut(s) 714
Asp700I GAANNNNTTC 2 cut(s) 686, 1134
Asp718I GGTACC 1 cut(s) 1058
AspLEI GCGC 1 cut(s) 220
AspS9I GGNCC 1 cut(s) 284
AsuC2I CCSGG 2 cut(s) 552, 553
AsuHPI GGTGA 1 cut(s) 100
AsuII TTCGAA 1 cut(s) 64
AvaI CYCGRG 2 cut(s) 551, 903
AvaII GGWCC 1 cut(s) 284
BaeGI GKGCMC 1 cut(s) 552
BanI GGYRCC 2 cut(s) 114, 1058
BanII GRGCYC 2 cut(s) 89, 516
BbsI GAAGAC 2 cut(s) 513, 1137
Bbv12I GWGCWC 2 cut(s) 89, 516
BbvI GCAGC 5 cut(s) 430, 433, 436, 439, 1075
BccI CCATC 2 cut(s) 354, 1017
BceAI ACGGC 2 cut(s) 44, 423
BciT130I CCWGG 1 cut(s) 112
BclI TGATCA 1 cut(s) 424
BcnI CCSGG 2 cut(s) 552, 553
BfoI RGCGCY 1 cut(s) 221
BfuAI ACCTGC 2 cut(s) 581, 953
BglII AGATCT 1 cut(s) 316
BisI GCNGC 6 cut(s) 444, 447, 450, 453, 973, 1089
BlpI GCTNAGC 1 cut(s) 88
BlsI GCNGC 6 cut(s) 445, 448, 451, 454, 974, 1090
Bme1390I CCNGG 3 cut(s) 112, 552, 553
Bme18I GGWCC 1 cut(s) 284
BmeT110I CYCGRG 2 cut(s) 551, 903
BmgT120I GGNCC 1 cut(s) 284
BmiI GGNNCC 2 cut(s) 116, 1060
BmrFI CCNGG 3 cut(s) 112, 552, 553
BmsI GCATC 5 cut(s) 62, 101, 134, 766, 1060
BpiI GAAGAC 2 cut(s) 513, 1137
BpmI CTGGAG 1 cut(s) 931
Bpu1102I GCTNAGC 1 cut(s) 88
Bpu14I TTCGAA 1 cut(s) 64
BpuMI CCSGG 2 cut(s) 552, 553
BsaJI CCNNGG 2 cut(s) 551, 1013
BsaWI WCCGGW 1 cut(s) 714
BsaXI ACNNNNNCTCC 2 cut(s) 929, 959
Bsc4I CCNNNNNNNGG 2 cut(s) 111, 736
Bse118I RCCGGY 2 cut(s) 714, 1091
Bse1I ACTGG 3 cut(s) 239, 948, 1180
Bse3DI GCAATG 2 cut(s) 48, 493
BseBI CCWGG 1 cut(s) 112
BseDI CCNNGG 2 cut(s) 551, 1013
BseGI GGATG 4 cut(s) 346, 781, 846, 1009
BseLI CCNNNNNNNGG 2 cut(s) 111, 736
BseMI GCAATG 2 cut(s) 48, 493
BseMII CTCAG 3 cut(s) 102, 575, 816
BseNI ACTGG 3 cut(s) 239, 948, 1180
BseRI GAGGAG 3 cut(s) 224, 692, 779
BseSI GKGCMC 1 cut(s) 552
BseX3I CGGCCG 1 cut(s) 408
BseXI GCAGC 5 cut(s) 430, 433, 436, 439, 1075
BseYI CCCAGC 1 cut(s) 220
BsgI GTGCAG 1 cut(s) 1125
Bsh1285I CGRYCG 1 cut(s) 411
BshFI GGCC 4 cut(s) 167, 252, 383, 410
BshNI GGYRCC 2 cut(s) 114, 1058
BshTI ACCGGT 1 cut(s) 714
BsiEI CGRYCG 1 cut(s) 411
BsiHKAI GWGCWC 2 cut(s) 89, 516
BsiHKCI CYCGRG 2 cut(s) 551, 903
BsiSI CCGG 4 cut(s) 411, 552, 715, 1092
BslFI GGGAC 1 cut(s) 649
BslI CCNNNNNNNGG 2 cut(s) 111, 736
BsmFI GGGAC 1 cut(s) 649
BsnI GGCC 4 cut(s) 167, 252, 383, 410
BsoBI CYCGRG 2 cut(s) 551, 903
Bsp119I TTCGAA 1 cut(s) 64
Bsp1286I GDGCHC 3 cut(s) 89, 516, 552
Bsp143I GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
Bsp1720I GCTNAGC 1 cut(s) 88
Bsp19I CCATGG 1 cut(s) 1013
BspACI CCGC 2 cut(s) 538, 972
BspANI GGCC 4 cut(s) 167, 252, 383, 410
BspCNI CTCAG 3 cut(s) 101, 574, 817
BspHI TCATGA 2 cut(s) 516, 709
BspLI GGNNCC 2 cut(s) 116, 1060
BspMI ACCTGC 2 cut(s) 581, 953
BspPI GGATC 2 cut(s) 380, 777
BspT104I TTCGAA 1 cut(s) 64
BspT107I GGYRCC 2 cut(s) 114, 1058
BsrDI GCAATG 2 cut(s) 48, 493
BsrFI RCCGGY 2 cut(s) 714, 1091
BsrI ACTGG 3 cut(s) 239, 948, 1180
BssAI RCCGGY 2 cut(s) 714, 1091
BssECI CCNNGG 2 cut(s) 551, 1013
BssMI GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
BssT1I CCWWGG 1 cut(s) 1013
Bst2UI CCWGG 1 cut(s) 112
Bst4CI ACNGT 6 cut(s) 466, 631, 640, 695, 1077, 1166
BstAPI GCANNNNNTGC 1 cut(s) 596
BstBI TTCGAA 1 cut(s) 64
BstC8I GCNNGC 2 cut(s) 662, 1177
BstDEI CTNAG 4 cut(s) 88, 561, 756, 825
BstDSI CCRYGG 1 cut(s) 1013
BstENI CCTNNNNNAGG 1 cut(s) 109
BstF5I GGATG 4 cut(s) 346, 781, 846, 1009
BstH2I RGCGCY 1 cut(s) 221
BstHHI GCGC 1 cut(s) 220
BstKTI GATC 7 cut(s) 319, 375, 427, 436, 616, 772, 891
BstMBI GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
BstMCI CGRYCG 1 cut(s) 411
BstMWI GCNNNNNNNGC 6 cut(s) 449, 452, 596, 605, 908, 1024
BstNI CCWGG 1 cut(s) 112
BstNSI RCATGY 2 cut(s) 1027, 1108
BstSCI CCNGG 3 cut(s) 110, 550, 551
BstSLI GKGCMC 1 cut(s) 552
BstV1I GCAGC 5 cut(s) 430, 433, 436, 439, 1075
BstV2I GAAGAC 2 cut(s) 513, 1137
BstX2I RGATCY 2 cut(s) 316, 769
BstXI CCANNNNNNTGG 1 cut(s) 199
BstYI RGATCY 2 cut(s) 316, 769
BstZI CGGCCG 1 cut(s) 408
BsuRI GGCC 4 cut(s) 167, 252, 383, 410
BtgI CCRYGG 1 cut(s) 1013
BtgZI GCGATG 2 cut(s) 50, 990
BtsCI GGATG 4 cut(s) 346, 781, 846, 1009
BtsI GCAGTG 1 cut(s) 360
BtsIMutI CAGTG 4 cut(s) 267, 360, 636, 955
BveI ACCTGC 2 cut(s) 581, 953
Cac8I GCNNGC 2 cut(s) 662, 1177
CciI TCATGA 2 cut(s) 516, 709
CfoI GCGC 1 cut(s) 220
Cfr10I RCCGGY 2 cut(s) 714, 1091
Cfr13I GGNCC 1 cut(s) 284
Cfr9I CCCGGG 1 cut(s) 551
CseI GACGC 1 cut(s) 947
Csp6I GTAC 3 cut(s) 556, 1059, 1117
CspAI ACCGGT 1 cut(s) 714
CviQI GTAC 3 cut(s) 556, 1059, 1117
DdeI CTNAG 4 cut(s) 88, 561, 756, 825
DpnI GATC 7 cut(s) 318, 374, 426, 435, 615, 771, 890
DpnII GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
EaeI YGGCCR 1 cut(s) 408
EagI CGGCCG 1 cut(s) 408
Ecl136II GAGCTC 2 cut(s) 87, 514
EclXI CGGCCG 1 cut(s) 408
Eco130I CCWWGG 1 cut(s) 1013
Eco24I GRGCYC 2 cut(s) 89, 516
Eco47I GGWCC 1 cut(s) 284
Eco47III AGCGCT 1 cut(s) 219
Eco52I CGGCCG 1 cut(s) 408
Eco53kI GAGCTC 2 cut(s) 87, 514
Eco57I CTGAAG 1 cut(s) 458
Eco88I CYCGRG 2 cut(s) 551, 903
EcoICRI GAGCTC 2 cut(s) 87, 514
EcoNI CCTNNNNNAGG 1 cut(s) 109
EcoRII CCWGG 1 cut(s) 110
EcoT14I CCWWGG 1 cut(s) 1013
EcoT22I ATGCAT 1 cut(s) 127
EcoT38I GRGCYC 2 cut(s) 89, 516
ErhI CCWWGG 1 cut(s) 1013
FaqI GGGAC 1 cut(s) 649
FbaI TGATCA 1 cut(s) 424
Fnu4HI GCNGC 6 cut(s) 444, 447, 450, 453, 973, 1089
FokI GGATG 4 cut(s) 333, 788, 853, 996
FriOI GRGCYC 2 cut(s) 89, 516
Fsp4HI GCNGC 6 cut(s) 444, 447, 450, 453, 973, 1089
GlaI GCGC 1 cut(s) 219
GluI GCNGC 6 cut(s) 444, 447, 450, 453, 973, 1089
GsaI CCCAGC 1 cut(s) 224
GsuI CTGGAG 1 cut(s) 931
HaeII RGCGCY 1 cut(s) 221
HaeIII GGCC 4 cut(s) 167, 252, 383, 410
HapII CCGG 4 cut(s) 411, 552, 715, 1092
HgaI GACGC 1 cut(s) 947
HhaI GCGC 1 cut(s) 220
Hin6I GCGC 1 cut(s) 218
HinP1I GCGC 1 cut(s) 218
HincII GTYRAC 2 cut(s) 895, 937
HindII GTYRAC 2 cut(s) 895, 937
HindIII AAGCTT 1 cut(s) 662
HinfI GANTC 4 cut(s) 242, 522, 882, 985
HpaI GTTAAC 1 cut(s) 895
HpaII CCGG 4 cut(s) 411, 552, 715, 1092
HphI GGTGA 1 cut(s) 100
Hpy166II GTNNAC 5 cut(s) 296, 558, 895, 937, 953
Hpy188I TCNGA 4 cut(s) 424, 438, 564, 1002
Hpy188III TCNNGA 7 cut(s) 314, 517, 617, 710, 721, 773, 886
Hpy8I GTNNAC 5 cut(s) 296, 558, 895, 937, 953
HpyAV CCTTC 6 cut(s) 34, 115, 352, 433, 614, 871
HpyCH4III ACNGT 6 cut(s) 466, 631, 640, 695, 1077, 1166
HpyCH4IV ACGT 2 cut(s) 652, 1081
HpyF10VI GCNNNNNNNGC 6 cut(s) 449, 452, 596, 605, 908, 1024
HpyF3I CTNAG 4 cut(s) 88, 561, 756, 825
HpySE526I ACGT 2 cut(s) 652, 1081
HspAI GCGC 1 cut(s) 218
KpnI GGTACC 1 cut(s) 1062
Ksp22I TGATCA 1 cut(s) 424
KspAI GTTAAC 1 cut(s) 895
Kzo9I GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
LmnI GCTCC 4 cut(s) 84, 675, 739, 1003
Lsp1109I GCAGC 5 cut(s) 430, 433, 436, 439, 1075
LweI GCATC 5 cut(s) 62, 101, 134, 766, 1060
MaeII ACGT 2 cut(s) 652, 1081
MaeIII GTNAC 6 cut(s) 265, 358, 475, 965, 1019, 1077
MalI GATC 7 cut(s) 318, 374, 426, 435, 615, 771, 890
MboI GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
MboII GAAGA 2 cut(s) 518, 1142
MfeI CAATTG 2 cut(s) 395, 1065
MflI RGATCY 2 cut(s) 316, 769
MhlI GDGCHC 3 cut(s) 89, 516, 552
MluCI AATT 7 cut(s) 193, 388, 395, 734, 857, 861, 1065
MlyI GAGTC 1 cut(s) 891
Mph1103I ATGCAT 1 cut(s) 127
MroXI GAANNNNTTC 2 cut(s) 686, 1134
MseI TTAA 5 cut(s) 461, 570, 860, 894, 1098
MslI CAYNNNNRTG 3 cut(s) 35, 120, 533
MspA1I CMGCKG 1 cut(s) 972
MspI CCGG 4 cut(s) 411, 552, 715, 1092
MspR9I CCNGG 3 cut(s) 112, 552, 553
MunI CAATTG 2 cut(s) 395, 1065
MvaI CCWGG 1 cut(s) 112
MwoI GCNNNNNNNGC 6 cut(s) 449, 452, 596, 605, 908, 1024
NciI CCSGG 2 cut(s) 552, 553
NcoI CCATGG 1 cut(s) 1013
NdeII GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
NlaIV GGNNCC 2 cut(s) 116, 1060
NmuCI GTSAC 3 cut(s) 265, 358, 475
NsiI ATGCAT 1 cut(s) 127
NspI RCATGY 2 cut(s) 1027, 1108
NspV TTCGAA 1 cut(s) 64
PaeR7I CTCGAG 1 cut(s) 903
PagI TCATGA 2 cut(s) 516, 709
PdmI GAANNNNTTC 2 cut(s) 686, 1134
PfeI GAWTC 3 cut(s) 242, 522, 985
PinAI ACCGGT 1 cut(s) 714
PkrI GCNGC 6 cut(s) 445, 448, 451, 454, 974, 1090
PleI GAGTC 1 cut(s) 890
PpsI GAGTC 1 cut(s) 890
PshBI ATTAAT 1 cut(s) 860
Psp124BI GAGCTC 2 cut(s) 89, 516
Psp6I CCWGG 1 cut(s) 110
PspFI CCCAGC 1 cut(s) 220
PspGI CCWGG 1 cut(s) 110
PspN4I GGNNCC 2 cut(s) 116, 1060
PspPI GGNCC 1 cut(s) 284
PspXI VCTCGAGB 1 cut(s) 903
PsuI RGATCY 2 cut(s) 316, 769
RsaI GTAC 3 cut(s) 557, 1060, 1118
RsaNI GTAC 3 cut(s) 556, 1059, 1117
RseI CAYNNNNRTG 3 cut(s) 35, 120, 533
SacI GAGCTC 2 cut(s) 89, 516
SaqAI TTAA 5 cut(s) 461, 570, 860, 894, 1098
SatI GCNGC 6 cut(s) 444, 447, 450, 453, 973, 1089
Sau3AI GATC 7 cut(s) 316, 372, 424, 433, 613, 769, 888
Sau96I GGNCC 1 cut(s) 284
SchI GAGTC 1 cut(s) 891
ScrFI CCNGG 3 cut(s) 112, 552, 553
SduI GDGCHC 3 cut(s) 89, 516, 552
SfaNI GCATC 5 cut(s) 62, 101, 134, 766, 1060
Sfr274I CTCGAG 1 cut(s) 903
SfuI TTCGAA 1 cut(s) 64
SinI GGWCC 1 cut(s) 284
SlaI CTCGAG 1 cut(s) 903
SmaI CCCGGG 1 cut(s) 553
SmiMI CAYNNNNRTG 3 cut(s) 35, 120, 533
SmlI CTYRAG 1 cut(s) 903
SmoI CTYRAG 1 cut(s) 903
Sse9I AATT 7 cut(s) 193, 388, 395, 734, 857, 861, 1065
SsiI CCGC 2 cut(s) 538, 972
SstI GAGCTC 2 cut(s) 89, 516
StyD4I CCNGG 3 cut(s) 110, 550, 551
StyI CCWWGG 1 cut(s) 1013
TaaI ACNGT 6 cut(s) 466, 631, 640, 695, 1077, 1166
TaiI ACGT 2 cut(s) 655, 1084
TaqI TCGA 2 cut(s) 64, 904
TasI AATT 7 cut(s) 193, 388, 395, 734, 857, 861, 1065
TauI GCSGC 1 cut(s) 975
TfiI GAWTC 3 cut(s) 242, 522, 985
Tru1I TTAA 5 cut(s) 461, 570, 860, 894, 1098
Tru9I TTAA 5 cut(s) 461, 570, 860, 894, 1098
TscAI CASTG 4 cut(s) 274, 367, 636, 955
TseFI GTSAC 3 cut(s) 265, 358, 475
TseI GCWGC 5 cut(s) 443, 446, 449, 452, 1088
Tsp45I GTSAC 3 cut(s) 265, 358, 475
TspDTI ATGAA 3 cut(s) 53, 66, 186
TspGWI ACGGA 1 cut(s) 297
TspMI CCCGGG 1 cut(s) 551
TspRI CASTG 4 cut(s) 274, 367, 636, 955
VpaK11BI GGWCC 1 cut(s) 284
VspI ATTAAT 1 cut(s) 860
XagI CCTNNNNNAGG 1 cut(s) 109
XapI RAATTY 1 cut(s) 388
XceI RCATGY 2 cut(s) 1027, 1108
XcmI CCANNNNNNNNNTGG 2 cut(s) 28, 128
XhoI CTCGAG 1 cut(s) 903
XmaI CCCGGG 1 cut(s) 551
XmnI GAANNNNTTC 2 cut(s) 686, 1134
Zsp2I ATGCAT 1 cut(s) 127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.