Prupe.3G285200_v2.0.a1

Tetratricopeptide repeat

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
OG0010792
Physical Location & Seq
Forward (+)
25814609 .. 25818622
4014 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G285200.1

Sequence Viewer

Length: 2160 bp
ATGCCTGGATTGGCTATGGATGCACCGAATGAGTACAGTGAAGTAGATGAACCCAATGGAGACTATGCGCCTCAAAAGGAAAGCTATAGTCAGCAAGGCTCTCCAAGAAGTCCATTGAGTCCTCAAAGTCCTCATAGTGGCTCCATTGGTCTGGCTATGGATGGTGGGATTGACACCTCTATTGAGCAGTTGTATCACAATGTCTGTGAGATGCAGAGCTCTGATCAATCTCCATCCAGGGCTAGCTTTGGATCATTCGGTGCGGAGTCGAGGATCGATTCCGAATTGAACCATCTTGTTGGATATGTTCATGAGCATTTGGAGATACGAAAAGAGGTTGTGATAGAAACTAAAGAGGCGGGTACTGGTAGTGACTCAACACCTGAGAAAGCAATTGTGTCTGCTGCTAAAAAGTCCCCAACAACAAGGGTAAAGACACCGTCTGCAAAATCAAGTCCTAAGAGCAAATCTCCACATGATAAGCCTCCGCTTGATAAGAGGTATGAGAAGAATCCGAAAAAATCCAATGCAGTATTCTCAAAGAACAAGCAGAGAAGTTTTGCTTTACATGGGGTAAGGTTTCAGAATGGAGTCGGGGATCCTCTTGAGGCGGGAATGGATAACCCTGACCTTGGCCCGTTCTTGCTTAAACAAGCAAGGGATTTGATTGGTTCTGGTGAAAATCCCCAGAAAGCGCTTGAGTTAGCTCTCCGGGCAGTGAAATCGTTTGAGAAGTGTACAAAGGAGAAACCCAGTTTAGAGTTGGTCATGTGTTTGCATGTTTTGGCAGCAATCTATTGCAGCTTAGGCCAGTATAATGAGGCAATTCCAGTTCTTGAGCGTGCCATTGATATTCCAGCTATAGAGGATGGCCAAGACCACGCACTAGCCAAGTTTGCAGGGTGCATGCAATTAGGTGATATTTATGCAATGACTGGTCAGATTGAGAATTCAATACTGTTCTATACAGCAGGTATGGAAATACAAAGGCAAGTCTTGGGAGAAACAGACCCTCGTCTTGGTGAGACATGTCGGTATGTAGCAGAGGCCCATGTTCAAGCATTGCAATTTGATGAGGCCGAGAAGCTCTGCCAGATGGCTCTTGAAATTCACAGGGAGAATGGTTCCCCTGCTTCCCTTGAAGAAGCAGCAGATAGAAGACTCATGGGACTTATTTGTGACTCGAAAGGAGACTATGAAGCTGCTCTTGAGCATTATGTTTTAGCAGGCATGTCCATGTCTGCTAATGACCAGGAAGTAGATGCTGCTTCAATTGATTGCAGCATTGGAGACGCTTACCTATCCTTGGCTCGGTATGATGAGGCAGTGTTTTCTTACCAGAAAGCACTCACTGTGTTTAAGACAACTAAAGGAGAGAGTCATCCAGCAGTAGCTTCTGTTTATGTTCGTTTAGCTGATCTGTACAACAAGATAGGAAAGTTTAAGGAATCAAAGTCGTACTGTGAAAATGCACATCGAATTTATGGGAAGCCCAATCCTGGCACCCCCTCAGAAGAGATTGCCAGTGGTCTTATTGATGTTTCTGCTATCTATCAATCTATGAATGATTTGGAGCAAGCCCTGAAGTTACTCAAGAAGGCTTTGAAAATCTTTGGTGACGGCCCTGGCCACCAAAGCACAACTGCAGGAATTGAGGCTCAGATGGGGGTCATGTACTATATGATGGGAAATTATTCTGATTCTTATGACACCTTCAAGAGTTCCATATCAAAGTTTAGGGCCACTGGAGAGAAGAAATCTGCCTTGTTTGGTATTGCTCTCAACCAAATGGGTCTAGTCTGTGTTCAGCGTTATTCAATAAATGAGGCTGCAGACCTGTTTGAAGAAGCAAGGAATATCTTAGAAAAAGAGTATGGGCCATATCACCCTGATACATTAGGGGTGTATAGTAATTTGGCTGGCACATATGATGCAATGGGAAGATTGGATGATGCCATTGAAATTCTGGAATATGTTGTTGGCATGAGAGAAGAGAAACTTGGAACGGCAAATCCTGATGTGGCCGATGAGAAGCGGAGGTTGGCTGAGTTGTTGAAAGAAGCAGGCAGGGTTCGGAGCAGGAAACCCAGATCATTAGAGACTCTTCTTGACACTGCCAACTCCAGAATCATAGAAAATGACATCATTGAGGTATTATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000003 GO:0000902 GO:0000904 GO:0001655 GO:0001822 GO:0001889 GO:0001894 GO:0001895 GO:0001947 GO:0002009 GO:0003006 GO:0003007 GO:0003143 GO:0003205 GO:0003230 GO:0003279 GO:0003283 GO:0003341 GO:0003351 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005829 GO:0005886 GO:0005929 GO:0006928 GO:0006996 GO:0007017 GO:0007018 GO:0007275 GO:0007368 GO:0007369 GO:0007389 GO:0007507 GO:0008150 GO:0009653 GO:0009790 GO:0009799 GO:0009826 GO:0009855 GO:0009856 GO:0009860 GO:0009887 GO:0009888 GO:0009932 GO:0009966 GO:0009968 GO:0009987 GO:0010646 GO:0010648 GO:0016020 GO:0016043 GO:0016049 GO:0022414 GO:0022603 GO:0022607 GO:0023051 GO:0023057 GO:0030030 GO:0030031 GO:0030111 GO:0030154 GO:0030178 GO:0030323 GO:0030324 GO:0031016 GO:0031347 GO:0032501 GO:0032502 GO:0032989 GO:0035050 GO:0035239 GO:0035295 GO:0035469 GO:0040007 GO:0042592 GO:0042995 GO:0043226 GO:0044085 GO:0044424 GO:0044444 GO:0044464 GO:0044706 GO:0044782 GO:0045494 GO:0045595 GO:0045596 GO:0045995 GO:0048468 GO:0048496 GO:0048513 GO:0048519 GO:0048523 GO:0048562 GO:0048565 GO:0048568 GO:0048583 GO:0048585 GO:0048588 GO:0048589 GO:0048598 GO:0048729 GO:0048731 GO:0048732 GO:0048856 GO:0048868 GO:0048869 GO:0048871 GO:0050789 GO:0050793 GO:0050794 GO:0051093 GO:0051239 GO:0051704 GO:0051960 GO:0055123 GO:0060026 GO:0060027 GO:0060249 GO:0060271 GO:0060287 GO:0060429 GO:0060541 GO:0060560 GO:0060562 GO:0060828 GO:0060993 GO:0061008 GO:0061371 GO:0065007 GO:0065008 GO:0070925 GO:0071840 GO:0071907 GO:0071908 GO:0071909 GO:0071910 GO:0071944 GO:0072001 GO:0072189 GO:0072359 GO:0080134 GO:0090090 GO:0090175 GO:0090178 GO:0120025 GO:0120031 GO:0120036 GO:1905276 GO:1905330 GO:2000026 GO:2000027 GO:2000050 GO:2000095 GO:2000167
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
TPR_10 TPR_12 TPR_7 TPR_8

Protein Analysis

720

Amino Acids

78.85

Weight (kDa)

5.2

Isoelectric Point (pI)

43.47

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010792)

Species Orthologous Gene IDs
arabidopsis_thaliana AT3G27960 AT3G27960 AT3G27960
fragaria_vesca FvH4_6g50730
malus_domestica MD09G1033100.v1.1 MD17G1034400.v1.1
prunus_persica Prupe.3G285200_v2.0.a1 Prupe.3G285200_v2.0.a1
pyrus_communis pycom111g02640 pycom17g03180
rosa_chinensis RchiOBHm_Chr2g0171671
rosa_laevigata RLG00000022027
rosa_multiflora Rmu_ssc0000252.1_g000009
rosa_roxburghii Rroxscaffold_2G00080540
rosa_rugosa Rorug02G0555200
rosa_samantha Rh2AG630200 Rh2BG640700 Rh2BG643200 Rh2CG609000
rosa_wichuraiana Rw2G052150

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 962
AccB1I GGYRCC 1 cut(s) 1502
AciI CCGC 5 cut(s) 263, 359, 488, 611, 2035
AclWI GGATC 4 cut(s) 259, 281, 593, 606
AcoI YGGCCR 3 cut(s) 871, 1627, 2022
AcsI RAATTY 4 cut(s) 949, 1107, 1479, 1962
AcuI CTGAAG 1 cut(s) 1604
AfaI GTAC 6 cut(s) 35, 364, 739, 1424, 1460, 1676
AfeI AGCGCT 1 cut(s) 696
AfiI CCNNNNNNNGG 6 cut(s) 137, 632, 1019, 1306, 1311, 1499
AflIII ACRYGT 1 cut(s) 1028
AjnI CCWGG 5 cut(s) 4, 236, 1251, 1498, 1624
AjuI GAANNNNNNNTTGG 8 cut(s) 518, 550, 1962, 1983, 1994, 2015, 2024, 2056
AloI GAACNNNNNNTCC 2 cut(s) 1996, 2028
Alw21I GWGCWC 1 cut(s) 221
Alw26I GTCTC 5 cut(s) 54, 1019, 1185, 1284, 2093
AlwI GGATC 4 cut(s) 259, 281, 593, 606
Aor51HI AGCGCT 1 cut(s) 696
ApeKI GCWGC 8 cut(s) 404, 788, 801, 1148, 1202, 1265, 1281, 1829
ApoI RAATTY 4 cut(s) 949, 1107, 1479, 1962
Asp700I GAANNNNTTC 1 cut(s) 1693
AspLEI GCGC 2 cut(s) 70, 697
AspS9I GGNCC 5 cut(s) 635, 1048, 1622, 1740, 1877
AsuC2I CCSGG 1 cut(s) 713
AsuHPI GGTGA 5 cut(s) 689, 929, 1034, 1628, 1877
AsuNHI GCTAGC 1 cut(s) 242
BalI TGGCCA 2 cut(s) 873, 1629
BamHI GGATCC 1 cut(s) 598
BanI GGYRCC 1 cut(s) 1502
BanII GRGCYC 1 cut(s) 221
BbsI GAAGAC 1 cut(s) 1165
Bbv12I GWGCWC 1 cut(s) 221
BbvI GCAGC 8 cut(s) 391, 800, 813, 1160, 1189, 1252, 1293, 1816
BccI CCATC 7 cut(s) 155, 241, 300, 863, 1090, 1657, 1678
BceAI ACGGC 2 cut(s) 1636, 2022
BcgI CGANNNNNNTGC 2 cut(s) 705, 739
BciT130I CCWGG 5 cut(s) 6, 238, 1253, 1500, 1626
BclI TGATCA 1 cut(s) 223
BcnI CCSGG 1 cut(s) 713
BcoDI GTCTC 5 cut(s) 54, 1019, 1185, 1284, 2093
BfaI CTAG 3 cut(s) 243, 887, 1796
BfmI CTRYAG 4 cut(s) 85, 861, 1644, 1830
BfoI RGCGCY 1 cut(s) 698
BfuAI ACCTGC 1 cut(s) 962
BisI GCNGC 8 cut(s) 405, 789, 802, 1149, 1203, 1266, 1282, 1830
BlsI GCNGC 8 cut(s) 406, 790, 803, 1150, 1204, 1267, 1283, 1831
Bme1390I CCNGG 6 cut(s) 6, 238, 713, 1253, 1500, 1626
BmgT120I GGNCC 5 cut(s) 635, 1048, 1622, 1740, 1877
BmiI GGNNCC 4 cut(s) 142, 600, 1126, 1504
BmrFI CCNGG 6 cut(s) 6, 238, 713, 1253, 1500, 1626
BmrI ACTGGG 1 cut(s) 747
BmsI GCATC 5 cut(s) 10, 201, 1252, 1921, 1942
BmtI GCTAGC 1 cut(s) 246
BmuI ACTGGG 1 cut(s) 747
BoxI GACNNNNGTC 1 cut(s) 1014
BpiI GAAGAC 1 cut(s) 1165
BplI GAGNNNNNCTC 2 cut(s) 454, 486
BpmI CTGGAG 2 cut(s) 1767, 2107
Bpu10I CCTNAGC 1 cut(s) 805
BpuEI CTTGAG 5 cut(s) 626, 719, 857, 1229, 1577
BpuMI CCSGG 1 cut(s) 713
Bsa29I ATCGAT 1 cut(s) 276
BsaJI CCNNGG 4 cut(s) 237, 631, 1305, 1624
Bsc4I CCNNNNNNNGG 6 cut(s) 137, 632, 1019, 1306, 1311, 1499
Bse1I ACTGG 7 cut(s) 370, 753, 811, 830, 940, 1524, 1750
Bse3DI GCAATG 3 cut(s) 936, 1061, 1941
BseBI CCWGG 5 cut(s) 6, 238, 1253, 1500, 1626
BseCI ATCGAT 1 cut(s) 276
BseDI CCNNGG 4 cut(s) 237, 631, 1305, 1624
BseGI GGATG 6 cut(s) 25, 166, 233, 874, 1381, 1954
BseLI CCNNNNNNNGG 6 cut(s) 137, 632, 1019, 1306, 1311, 1499
BseMI GCAATG 3 cut(s) 936, 1061, 1941
BseMII CTCAG 4 cut(s) 375, 1524, 1673, 2037
BseNI ACTGG 7 cut(s) 370, 753, 811, 830, 940, 1524, 1750
BseXI GCAGC 8 cut(s) 391, 800, 813, 1160, 1189, 1252, 1293, 1816
BshNI GGYRCC 1 cut(s) 1502
BshVI ATCGAT 1 cut(s) 276
BsiHKAI GWGCWC 1 cut(s) 221
BsiSI CCGG 1 cut(s) 712
BslFI GGGAC 2 cut(s) 400, 1182
BslI CCNNNNNNNGG 6 cut(s) 137, 632, 1019, 1306, 1311, 1499
BsmAI GTCTC 5 cut(s) 54, 1019, 1185, 1284, 2093
BsmBI CGTCTC 1 cut(s) 1284
BsmFI GGGAC 2 cut(s) 400, 1182
Bsp1286I GDGCHC 1 cut(s) 221
Bsp1407I TGTACA 2 cut(s) 737, 1422
Bsp143I GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
BspACI CCGC 5 cut(s) 263, 359, 488, 611, 2035
BspCNI CTCAG 4 cut(s) 376, 1523, 1672, 2038
BspDI ATCGAT 1 cut(s) 276
BspHI TCATGA 1 cut(s) 310
BspLI GGNNCC 4 cut(s) 142, 600, 1126, 1504
BspMAI CTGCAG 2 cut(s) 1648, 1834
BspMI ACCTGC 1 cut(s) 962
BspOI GCTAGC 1 cut(s) 246
BspPI GGATC 4 cut(s) 259, 281, 593, 606
BspT107I GGYRCC 1 cut(s) 1502
BsrDI GCAATG 3 cut(s) 936, 1061, 1941
BsrGI TGTACA 2 cut(s) 737, 1422
BsrI ACTGG 7 cut(s) 370, 753, 811, 830, 940, 1524, 1750
BssECI CCNNGG 4 cut(s) 237, 631, 1305, 1624
BssMI GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
BssT1I CCWWGG 2 cut(s) 631, 1305
Bst2UI CCWGG 5 cut(s) 6, 238, 1253, 1500, 1626
Bst4CI ACNGT 5 cut(s) 38, 441, 960, 1354, 1463
Bst6I CTCTTC 3 cut(s) 1509, 1986, 2109
BstAUI TGTACA 2 cut(s) 737, 1422
BstC8I GCNNGC 7 cut(s) 244, 843, 908, 1228, 1578, 1921, 2065
BstDEI CTNAG 7 cut(s) 384, 459, 805, 1510, 1659, 1861, 2046
BstF5I GGATG 6 cut(s) 25, 166, 233, 874, 1381, 1954
BstH2I RGCGCY 1 cut(s) 698
BstHHI GCGC 2 cut(s) 70, 697
BstKTI GATC 6 cut(s) 226, 254, 276, 601, 1420, 2093
BstMAI GTCTC 5 cut(s) 54, 1019, 1185, 1284, 2093
BstMBI GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
BstMWI GCNNNNNNNGC 5 cut(s) 20, 713, 807, 896, 1635
BstNI CCWGG 5 cut(s) 6, 238, 1253, 1500, 1626
BstNSI RCATGY 4 cut(s) 782, 910, 1032, 1234
BstPAI GACNNNNGTC 1 cut(s) 1014
BstSCI CCNGG 6 cut(s) 4, 236, 711, 1251, 1498, 1624
BstSFI CTRYAG 4 cut(s) 85, 861, 1644, 1830
BstV1I GCAGC 8 cut(s) 391, 800, 813, 1160, 1189, 1252, 1293, 1816
BstV2I GAAGAC 1 cut(s) 1165
BstX2I RGATCY 1 cut(s) 598
BstXI CCANNNNNNTGG 2 cut(s) 151, 299
BstYI RGATCY 1 cut(s) 598
Bsu15I ATCGAT 1 cut(s) 276
BsuTUI ATCGAT 1 cut(s) 276
BtsCI GGATG 6 cut(s) 25, 166, 233, 874, 1381, 1954
BtsI GCAGTG 3 cut(s) 723, 1332, 2112
BtsIMutI CAGTG 7 cut(s) 43, 723, 1332, 1350, 1531, 1743, 2112
BveI ACCTGC 1 cut(s) 962
Cac8I GCNNGC 7 cut(s) 244, 843, 908, 1228, 1578, 1921, 2065
CciI TCATGA 1 cut(s) 310
CfoI GCGC 2 cut(s) 70, 697
Cfr13I GGNCC 5 cut(s) 635, 1048, 1622, 1740, 1877
ClaI ATCGAT 1 cut(s) 276
CseI GACGC 1 cut(s) 1301
Csp6I GTAC 6 cut(s) 34, 363, 738, 1423, 1459, 1675
CviQI GTAC 6 cut(s) 34, 363, 738, 1423, 1459, 1675
DdeI CTNAG 7 cut(s) 384, 459, 805, 1510, 1659, 1861, 2046
DpnI GATC 6 cut(s) 225, 253, 275, 600, 1419, 2092
DpnII GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
EaeI YGGCCR 3 cut(s) 871, 1627, 2022
Eam1104I CTCTTC 3 cut(s) 1509, 1986, 2109
EarI CTCTTC 3 cut(s) 1509, 1986, 2109
Ecl136II GAGCTC 1 cut(s) 219
Eco130I CCWWGG 2 cut(s) 631, 1305
Eco24I GRGCYC 1 cut(s) 221
Eco47III AGCGCT 1 cut(s) 696
Eco53kI GAGCTC 1 cut(s) 219
Eco57I CTGAAG 1 cut(s) 1604
EcoICRI GAGCTC 1 cut(s) 219
EcoRI GAATTC 1 cut(s) 949
EcoRII CCWGG 5 cut(s) 4, 236, 1251, 1498, 1624
EcoT14I CCWWGG 2 cut(s) 631, 1305
EcoT38I GRGCYC 1 cut(s) 221
ErhI CCWWGG 2 cut(s) 631, 1305
Esp3I CGTCTC 1 cut(s) 1284
FalI AAGNNNNNCTT 6 cut(s) 547, 579, 1191, 1223, 1983, 2015
FaqI GGGAC 2 cut(s) 400, 1182
FauI CCCGC 2 cut(s) 352, 604
FauNDI CATATG 1 cut(s) 1927
FbaI TGATCA 1 cut(s) 223
Fnu4HI GCNGC 8 cut(s) 405, 789, 802, 1149, 1203, 1266, 1282, 1830
FokI GGATG 6 cut(s) 32, 173, 220, 881, 1368, 1961
FriOI GRGCYC 1 cut(s) 221
Fsp4HI GCNGC 8 cut(s) 405, 789, 802, 1149, 1203, 1266, 1282, 1830
FspBI CTAG 3 cut(s) 243, 887, 1796
GlaI GCGC 2 cut(s) 69, 696
GluI GCNGC 8 cut(s) 405, 789, 802, 1149, 1203, 1266, 1282, 1830
GsuI CTGGAG 2 cut(s) 1767, 2107
HaeII RGCGCY 1 cut(s) 698
HapII CCGG 1 cut(s) 712
HgaI GACGC 1 cut(s) 1301
HhaI GCGC 2 cut(s) 70, 697
Hin6I GCGC 2 cut(s) 68, 695
HinP1I GCGC 2 cut(s) 68, 695
HpaII CCGG 1 cut(s) 712
HphI GGTGA 5 cut(s) 689, 929, 1034, 1628, 1877
Hpy166II GTNNAC 1 cut(s) 738
Hpy188I TCNGA 9 cut(s) 223, 283, 516, 585, 942, 1513, 1662, 1699, 2076
Hpy8I GTNNAC 1 cut(s) 738
HpyAV CCTTC 2 cut(s) 1591, 1723
HpyCH4III ACNGT 5 cut(s) 38, 441, 960, 1354, 1463
HpyF10VI GCNNNNNNNGC 5 cut(s) 20, 713, 807, 896, 1635
HpyF3I CTNAG 7 cut(s) 384, 459, 805, 1510, 1659, 1861, 2046
HspAI GCGC 2 cut(s) 68, 695
Ksp22I TGATCA 1 cut(s) 223
Kzo9I GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
LmnI GCTCC 3 cut(s) 146, 1573, 2076
Lsp1109I GCAGC 8 cut(s) 391, 800, 813, 1160, 1189, 1252, 1293, 1816
LweI GCATC 5 cut(s) 10, 201, 1252, 1921, 1942
MaeI CTAG 3 cut(s) 243, 887, 1796
MaeIII GTNAC 4 cut(s) 371, 1178, 1587, 1616
MalI GATC 6 cut(s) 225, 253, 275, 600, 1419, 2092
MboI GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
MboII GAAGA 9 cut(s) 520, 1154, 1170, 1526, 1765, 1856, 1953, 2003, 2096
MfeI CAATTG 2 cut(s) 393, 1272
MflI RGATCY 1 cut(s) 598
MhlI GDGCHC 1 cut(s) 221
MlsI TGGCCA 2 cut(s) 873, 1629
MluNI TGGCCA 2 cut(s) 873, 1629
MlyI GAGTC 8 cut(s) 127, 275, 368, 600, 1155, 1175, 1387, 2095
MmeI TCCRAC 1 cut(s) 280
Mox20I TGGCCA 2 cut(s) 873, 1629
MroXI GAANNNNTTC 1 cut(s) 1693
MscI TGGCCA 2 cut(s) 873, 1629
MseI TTAA 3 cut(s) 648, 1359, 1443
MslI CAYNNNNRTG 1 cut(s) 1235
Msp20I TGGCCA 2 cut(s) 873, 1629
MspI CCGG 1 cut(s) 712
MspR9I CCNGG 6 cut(s) 6, 238, 713, 1253, 1500, 1626
MunI CAATTG 2 cut(s) 393, 1272
MvaI CCWGG 5 cut(s) 6, 238, 1253, 1500, 1626
MwoI GCNNNNNNNGC 5 cut(s) 20, 713, 807, 896, 1635
NciI CCSGG 1 cut(s) 713
NdeI CATATG 1 cut(s) 1927
NdeII GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
NheI GCTAGC 1 cut(s) 242
NlaIV GGNNCC 4 cut(s) 142, 600, 1126, 1504
NmeAIII GCCGAG 1 cut(s) 1105
NmuCI GTSAC 3 cut(s) 371, 1178, 1616
NspI RCATGY 4 cut(s) 782, 910, 1032, 1234
PaeI GCATGC 1 cut(s) 910
PagI TCATGA 1 cut(s) 310
PciI ACATGT 1 cut(s) 1028
PdmI GAANNNNTTC 1 cut(s) 1693
PfeI GAWTC 5 cut(s) 278, 511, 1448, 1700, 2127
PflFI GACNNNGTC 1 cut(s) 439
PkrI GCNGC 8 cut(s) 406, 790, 803, 1150, 1204, 1267, 1283, 1831
PleI GAGTC 8 cut(s) 126, 274, 368, 599, 1155, 1175, 1386, 2095
PpsI GAGTC 8 cut(s) 126, 274, 368, 599, 1155, 1175, 1386, 2095
PscI ACATGT 1 cut(s) 1028
PshAI GACNNNNGTC 1 cut(s) 1014
Psp124BI GAGCTC 1 cut(s) 221
Psp6I CCWGG 5 cut(s) 4, 236, 1251, 1498, 1624
PspGI CCWGG 5 cut(s) 4, 236, 1251, 1498, 1624
PspN4I GGNNCC 4 cut(s) 142, 600, 1126, 1504
PspPI GGNCC 5 cut(s) 635, 1048, 1622, 1740, 1877
PstI CTGCAG 2 cut(s) 1648, 1834
PsuI RGATCY 1 cut(s) 598
PsyI GACNNNGTC 1 cut(s) 439
RsaI GTAC 6 cut(s) 35, 364, 739, 1424, 1460, 1676
RsaNI GTAC 6 cut(s) 34, 363, 738, 1423, 1459, 1675
RseI CAYNNNNRTG 1 cut(s) 1235
SacI GAGCTC 1 cut(s) 221
SaqAI TTAA 3 cut(s) 648, 1359, 1443
SatI GCNGC 8 cut(s) 405, 789, 802, 1149, 1203, 1266, 1282, 1830
Sau3AI GATC 6 cut(s) 223, 251, 273, 598, 1417, 2090
Sau96I GGNCC 5 cut(s) 635, 1048, 1622, 1740, 1877
SchI GAGTC 8 cut(s) 127, 275, 368, 600, 1155, 1175, 1387, 2095
ScrFI CCNGG 6 cut(s) 6, 238, 713, 1253, 1500, 1626
SduI GDGCHC 1 cut(s) 221
SfaNI GCATC 5 cut(s) 10, 201, 1252, 1921, 1942
SfcI CTRYAG 4 cut(s) 85, 861, 1644, 1830
SmiMI CAYNNNNRTG 1 cut(s) 1235
SmlI CTYRAG 5 cut(s) 605, 698, 836, 1208, 1592
SmoI CTYRAG 5 cut(s) 605, 698, 836, 1208, 1592
SphI GCATGC 1 cut(s) 910
SsiI CCGC 5 cut(s) 263, 359, 488, 611, 2035
SspMI CTAG 3 cut(s) 243, 887, 1796
SstI GAGCTC 1 cut(s) 221
StyD4I CCNGG 6 cut(s) 4, 236, 711, 1251, 1498, 1624
StyI CCWWGG 2 cut(s) 631, 1305
TaaI ACNGT 5 cut(s) 38, 441, 960, 1354, 1463
TaqI TCGA 4 cut(s) 269, 276, 1184, 1477
TatI WGTACW 4 cut(s) 33, 737, 1422, 1674
TfiI GAWTC 5 cut(s) 278, 511, 1448, 1700, 2127
Tru1I TTAA 3 cut(s) 648, 1359, 1443
Tru9I TTAA 3 cut(s) 648, 1359, 1443
TscAI CASTG 7 cut(s) 43, 723, 1332, 1357, 1531, 1750, 2119
TseFI GTSAC 3 cut(s) 371, 1178, 1616
TseI GCWGC 8 cut(s) 404, 788, 801, 1148, 1202, 1265, 1281, 1829
Tsp45I GTSAC 3 cut(s) 371, 1178, 1616
TspDTI ATGAA 4 cut(s) 63, 299, 1212, 1577
TspRI CASTG 7 cut(s) 43, 723, 1332, 1357, 1531, 1750, 2119
Tth111I GACNNNGTC 1 cut(s) 439
XapI RAATTY 4 cut(s) 949, 1107, 1479, 1962
XceI RCATGY 4 cut(s) 782, 910, 1032, 1234
XcmI CCANNNNNNNNNTGG 2 cut(s) 760, 1963
XmnI GAANNNNTTC 1 cut(s) 1693
XspI CTAG 3 cut(s) 243, 887, 1796
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.