Prupe.3G289000_v2.0.a1

MORC family CW-type zinc finger protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp03
Physical Location & Seq
Forward (+)
25997983 .. 26006457
8475 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.3G289000.1

Sequence Viewer

Length: 1884 bp
ATGACAATGAGCAATTCAAACATCATAGATTTATGCAGTGATGATGAAATGGGTCGGTCAAATATTAAAAAATGTAGAAGGGAGATTGAACCTGGTTTTGATTCTGCATCTGCACCCTCAGTATGTCCAACACCAATTTCTCGGCAATTTTGGAAAGCTGGATACTACGAAATAGAGCAGGGACAGAGGTGCAAAGCCGCAAACCAATATGGAAAAAACCATATGCGCATACACCCTATGTTCCTTCACTCAAATGCCACTTCACATAAGTGGGCTTTTGGAGCCATGGCAGAGTTGCTTGACAATGCAGTTGATGAGGTACAAAACGGAGCTACTTTTGTTAGCATAGACAAGATCTCTACCCCACAGTATGGGACTCCAGCTTTGCTAATTCGAGATGATGGCGGCGGAATGGACCCTGACGCTATAAGGCGCTGTATGAGCTTTGGGTTTTCAGATAAGAAATCAAAGTTTACCATTGGACAATATGGAAATGGATTCAAGACAAGCTCTATGAGACTTGGAGCAGATGTTATTGTCTTCAGTCGCCACTTGAAATCAAGGTCACTGACTCAAAGTGTTGGACTCCTTTCCTATACATTTTTGAGGTCGATGGGCAACAACAACGTAGTTGTACCAATGGTGGATTATGAGTTTAACTCATCAGCTAGAACGTTCGGGCCCTTAATTCCACATGATGAAGATCATTTTTCTTCTAACCTGACCATGCTGTTGCAGTGGTCTCCTTATTCAACGGAAGACGAGTTGCTGAAGCAATTTGATGATATAGGGGATCATGGAACAAAAGTAGTCATTTACAATCTTTGGTTAAATGATGATGGGGAGATGGAACTAGATTTTGATTCAGATCCTGAGGATATTTGTATTAACGGTGACAAAACTGGCAGAATGAAACAAATTCAGTATGTTGCTAACCTATATCAGCACTCTCTCCGTGCATATGCATCAATCCTGTATAGACAGCTACCAGAGTACTTTAGAATAATTTTGCGTGGACGAGATATTGAGTACCATAATATTGCCGAGGATCTCAAATATGTTCAGTTTATCAAGTATATGCCACAAGTTGATGGAAACCTGGAGGTTGAAATTATTACCGCAATAGGGTTTTTGAAGGAAGCACCACATGCTAATACTCATGGTTTTAATATCTACCATCGGAATCGTCTGATACTGCCATTTTGGCGTGCAGTTGGATGTACAAACGGTACTGGAAGAGGAGTTGTCGGTGTCCTGGAACCAGATTTTATTCAGCCAACTCACAACAAGCAAGATTTTGAGAAAACTTCCCTCTTCCAAAAGCTTGAAGATCGTTTAAAGCAAATGACAGTGGAGTACTGGAACAAACATTGCAAACTGATTGGTTATCAGCAAGTTAAAAAAACTCCATCGACAACGACAACATTACCTTCTTCCGTAACTCAGAATTGTGTGGACCAAGACCAACCTTTGTTACTGAATCATGGTTCCCAATATGAAAGCTCAAACTCAAGAGCAGGTTTGATAAAAAAGAGGAAGGATCTTCTTGATCCTCCACTGAAACTACAACATGCAAAAAGGCACATGGGATCATCCTGTGGAACTGATGTCCAGTGCATTAGTGAAGAGCCTGAAAATAGCGTTGAGGGCATGATGCGAGTTTCACAGAAGATGCTTCTGATGCAAGAAAACAAAAGGCTTCAGTCACGGCTGCTCGCATTGGAGAAAATGGTGCAAGAACTTGATTTGAAGGTGCAACAACTGAAGGATGAACAAAAGAATGTGGAACAACATGCAGGTGAACTAGAGAATGAACTGACACAGCTGACACAGACGTTGTTTGAATCATGCAAATGGAATATGTACAAGCAGCACGTTTGCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

628

Amino Acids

71.59

Weight (kDa)

6.3

Isoelectric Point (pI)

45.58

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1787
Acc16I TGCGCA 1 cut(s) 227
Acc36I ACCTGC 2 cut(s) 1508, 1787
AccB7I CCANNNNNTGG 1 cut(s) 371
AciI CCGC 4 cut(s) 198, 405, 408, 1119
AclI AACGTT 1 cut(s) 674
AclWI GGATC 6 cut(s) 801, 863, 1056, 1544, 1548, 1597
AcsI RAATTY 1 cut(s) 918
AcuI CTGAAG 4 cut(s) 526, 791, 1685, 1784
AfaI GTAC 8 cut(s) 321, 636, 995, 1031, 1222, 1231, 1358, 1865
AfiI CCNNNNNNNGG 2 cut(s) 371, 1125
AjnI CCWGG 3 cut(s) 91, 1098, 1254
AjuI GAANNNNNNNTTGG 2 cut(s) 121, 153
AleI CACNNNNGTG 1 cut(s) 268
Alw26I GTCTC 2 cut(s) 511, 747
AlwI GGATC 6 cut(s) 801, 863, 1056, 1544, 1548, 1597
AlwNI CAGNNNCTG 1 cut(s) 872
AoxI GGCC 1 cut(s) 680
ApaI GGGCCC 1 cut(s) 684
ApeKI GCWGC 2 cut(s) 1711, 1870
ApoI RAATTY 1 cut(s) 918
ArsI GACNNNNNNTTYG 2 cut(s) 367, 399
AspLEI GCGC 2 cut(s) 228, 435
AspS9I GGNCC 4 cut(s) 415, 680, 681, 1456
AsuHPI GGTGA 2 cut(s) 905, 1811
AvaII GGWCC 2 cut(s) 415, 1456
AxyI CCTNAGG 1 cut(s) 873
BaeGI GKGCMC 1 cut(s) 684
BanII GRGCYC 1 cut(s) 684
BbsI GAAGAC 2 cut(s) 532, 765
BbvI GCAGC 1 cut(s) 1698
BccI CCATC 7 cut(s) 395, 607, 833, 841, 1085, 1185, 1417
BceAI ACGGC 1 cut(s) 1724
BciT130I CCWGG 3 cut(s) 93, 1100, 1256
BciVI GTATCC 1 cut(s) 155
BcoDI GTCTC 2 cut(s) 511, 747
BfaI CTAG 4 cut(s) 669, 854, 1805, 1882
BfoI RGCGCY 1 cut(s) 436
BfuAI ACCTGC 2 cut(s) 1508, 1787
BfuI GTATCC 1 cut(s) 155
BglI GCCNNNNNGGC 1 cut(s) 1204
BglII AGATCT 1 cut(s) 354
BisI GCNGC 4 cut(s) 198, 406, 1712, 1871
BlsI GCNGC 4 cut(s) 199, 407, 1713, 1872
BmcAI AGTACT 2 cut(s) 995, 1358
Bme1390I CCNGG 3 cut(s) 93, 1100, 1256
Bme18I GGWCC 2 cut(s) 415, 1456
BmgT120I GGNCC 4 cut(s) 415, 680, 681, 1456
BmiI GGNNCC 5 cut(s) 283, 417, 682, 1260, 1489
BmrFI CCNGG 3 cut(s) 93, 1100, 1256
BmsI GCATC 5 cut(s) 116, 974, 1644, 1662, 1671
BpiI GAAGAC 2 cut(s) 532, 765
BplI GAGNNNNNCTC 2 cut(s) 644, 676
BpmI CTGGAG 2 cut(s) 363, 1121
BpuEI CTTGAG 1 cut(s) 1495
BsaBI GATNNNNATC 2 cut(s) 702, 867
BsaI GGTCTC 1 cut(s) 747
BsaJI CCNNGG 2 cut(s) 285, 1044
BsaXI ACNNNNNCTCC 2 cut(s) 516, 546
Bsc4I CCNNNNNNNGG 2 cut(s) 371, 1125
Bse1I ACTGG 4 cut(s) 907, 1237, 1364, 1612
Bse21I CCTNAGG 1 cut(s) 873
Bse3DI GCAATG 1 cut(s) 1369
Bse8I GATNNNNATC 2 cut(s) 702, 867
BseBI CCWGG 3 cut(s) 93, 1100, 1256
BseDI CCNNGG 2 cut(s) 285, 1044
BseGI GGATG 3 cut(s) 1223, 1592, 1774
BseJI GATNNNNATC 2 cut(s) 702, 867
BseLI CCNNNNNNNGG 2 cut(s) 371, 1125
BseMI GCAATG 1 cut(s) 1369
BseMII CTCAG 3 cut(s) 132, 864, 1457
BseNI ACTGG 4 cut(s) 907, 1237, 1364, 1612
BseRI GAGGAG 1 cut(s) 1254
BseSI GKGCMC 1 cut(s) 684
BseXI GCAGC 1 cut(s) 1698
BsgI GTGCAG 2 cut(s) 96, 1230
BshFI GGCC 1 cut(s) 682
BslFI GGGAC 2 cut(s) 195, 388
BslI CCNNNNNNNGG 2 cut(s) 371, 1125
BsmAI GTCTC 2 cut(s) 511, 747
BsmFI GGGAC 2 cut(s) 195, 388
BsnI GGCC 1 cut(s) 682
Bso31I GGTCTC 1 cut(s) 747
Bsp120I GGGCCC 1 cut(s) 680
Bsp1286I GDGCHC 1 cut(s) 684
Bsp1407I TGTACA 2 cut(s) 1220, 1863
Bsp143I GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
Bsp19I CCATGG 1 cut(s) 285
BspACI CCGC 4 cut(s) 198, 405, 408, 1119
BspANI GGCC 1 cut(s) 682
BspCNI CTCAG 3 cut(s) 131, 865, 1456
BspLI GGNNCC 5 cut(s) 283, 417, 682, 1260, 1489
BspMI ACCTGC 2 cut(s) 1508, 1787
BspPI GGATC 6 cut(s) 801, 863, 1056, 1544, 1548, 1597
BspQI GCTCTTC 1 cut(s) 1620
BspTNI GGTCTC 1 cut(s) 747
BsrDI GCAATG 1 cut(s) 1369
BsrGI TGTACA 2 cut(s) 1220, 1863
BsrI ACTGG 4 cut(s) 907, 1237, 1364, 1612
BssECI CCNNGG 2 cut(s) 285, 1044
BssMI GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
BssT1I CCWWGG 1 cut(s) 285
Bst2UI CCWGG 3 cut(s) 93, 1100, 1256
Bst4CI ACNGT 4 cut(s) 369, 893, 1229, 1351
Bst6I CTCTTC 3 cut(s) 1231, 1319, 1620
BstAPI GCANNNNNTGC 1 cut(s) 1148
BstAUI TGTACA 2 cut(s) 1220, 1863
BstC8I GCNNGC 2 cut(s) 1209, 1716
BstDEI CTNAG 3 cut(s) 118, 873, 1443
BstDSI CCRYGG 1 cut(s) 285
BstF5I GGATG 3 cut(s) 1223, 1592, 1774
BstH2I RGCGCY 1 cut(s) 436
BstHHI GCGC 2 cut(s) 228, 435
BstKTI GATC 9 cut(s) 357, 706, 796, 871, 1051, 1333, 1543, 1552, 1592
BstMAI GTCTC 2 cut(s) 511, 747
BstMBI GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
BstMWI GCNNNNNNNGC 6 cut(s) 281, 441, 1148, 1204, 1647, 1681
BstNI CCWGG 3 cut(s) 93, 1100, 1256
BstNSI RCATGY 3 cut(s) 1151, 1574, 1796
BstSCI CCNGG 3 cut(s) 91, 1098, 1254
BstSLI GKGCMC 1 cut(s) 684
BstV1I GCAGC 1 cut(s) 1698
BstV2I GAAGAC 2 cut(s) 532, 765
BstX2I RGATCY 4 cut(s) 354, 868, 1048, 1540
BstYI RGATCY 4 cut(s) 354, 868, 1048, 1540
Bsu36I CCTNAGG 1 cut(s) 873
BsuI GTATCC 1 cut(s) 155
BsuRI GGCC 1 cut(s) 682
BtgI CCRYGG 1 cut(s) 285
BtsCI GGATG 3 cut(s) 1223, 1592, 1774
BtsI GCAGTG 2 cut(s) 43, 743
BtsIMutI CAGTG 6 cut(s) 43, 566, 743, 1356, 1556, 1619
BveI ACCTGC 2 cut(s) 1508, 1787
Cac8I GCNNGC 2 cut(s) 1209, 1716
CaiI CAGNNNCTG 1 cut(s) 872
CfoI GCGC 2 cut(s) 228, 435
Cfr13I GGNCC 4 cut(s) 415, 680, 681, 1456
CseI GACGC 1 cut(s) 431
CsiI ACCWGGT 1 cut(s) 91
Csp6I GTAC 8 cut(s) 320, 635, 994, 1030, 1221, 1230, 1357, 1864
CviQI GTAC 8 cut(s) 320, 635, 994, 1030, 1221, 1230, 1357, 1864
DdeI CTNAG 3 cut(s) 118, 873, 1443
DpnI GATC 9 cut(s) 356, 705, 795, 870, 1050, 1332, 1542, 1551, 1591
DpnII GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
DraI TTTAAA 1 cut(s) 1338
Eam1104I CTCTTC 3 cut(s) 1231, 1319, 1620
EarI CTCTTC 3 cut(s) 1231, 1319, 1620
EciI GGCGGA 1 cut(s) 423
Eco130I CCWWGG 1 cut(s) 285
Eco24I GRGCYC 1 cut(s) 684
Eco31I GGTCTC 1 cut(s) 747
Eco47I GGWCC 2 cut(s) 415, 1456
Eco57I CTGAAG 4 cut(s) 526, 791, 1685, 1784
Eco81I CCTNAGG 1 cut(s) 873
EcoO109I RGGNCCY 1 cut(s) 681
EcoRII CCWGG 3 cut(s) 91, 1098, 1254
EcoT14I CCWWGG 1 cut(s) 285
EcoT22I ATGCAT 1 cut(s) 967
EcoT38I GRGCYC 1 cut(s) 684
ErhI CCWWGG 1 cut(s) 285
FaqI GGGAC 2 cut(s) 195, 388
FauNDI CATATG 2 cut(s) 222, 961
Fnu4HI GCNGC 4 cut(s) 198, 406, 1712, 1871
FokI GGATG 3 cut(s) 1230, 1579, 1781
FriOI GRGCYC 1 cut(s) 684
Fsp4HI GCNGC 4 cut(s) 198, 406, 1712, 1871
FspAI RTGCGCAY 1 cut(s) 227
FspBI CTAG 4 cut(s) 669, 854, 1805, 1882
FspI TGCGCA 1 cut(s) 227
GlaI GCGC 2 cut(s) 227, 434
GluI GCNGC 4 cut(s) 198, 406, 1712, 1871
GsuI CTGGAG 2 cut(s) 363, 1121
HaeII RGCGCY 1 cut(s) 436
HaeIII GGCC 1 cut(s) 682
HgaI GACGC 1 cut(s) 431
HhaI GCGC 2 cut(s) 228, 435
Hin6I GCGC 2 cut(s) 226, 433
HinP1I GCGC 2 cut(s) 226, 433
HindIII AAGCTT 1 cut(s) 1322
HinfI GANTC 9 cut(s) 101, 376, 498, 571, 585, 863, 1183, 1480, 1844
HphI GGTGA 2 cut(s) 905, 1811
Hpy166II GTNNAC 4 cut(s) 474, 1016, 1456, 1802
Hpy188I TCNGA 6 cut(s) 457, 868, 1182, 1191, 1446, 1680
Hpy188III TCNNGA 5 cut(s) 395, 502, 872, 1512, 1547
Hpy8I GTNNAC 4 cut(s) 474, 1016, 1456, 1802
HpyAV CCTTC 7 cut(s) 72, 254, 1129, 1440, 1531, 1744, 1759
HpyCH4III ACNGT 4 cut(s) 369, 893, 1229, 1351
HpyCH4IV ACGT 4 cut(s) 627, 674, 1835, 1875
HpyF10VI GCNNNNNNNGC 6 cut(s) 281, 441, 1148, 1204, 1647, 1681
HpyF3I CTNAG 3 cut(s) 118, 873, 1443
HpySE526I ACGT 4 cut(s) 627, 674, 1835, 1875
HspAI GCGC 2 cut(s) 226, 433
Kzo9I GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
LguI GCTCTTC 1 cut(s) 1620
LmnI GCTCC 3 cut(s) 281, 329, 524
Lsp1109I GCAGC 1 cut(s) 1698
LweI GCATC 5 cut(s) 116, 974, 1644, 1662, 1671
MabI ACCWGGT 1 cut(s) 91
MaeI CTAG 4 cut(s) 669, 854, 1805, 1882
MaeII ACGT 4 cut(s) 627, 674, 1835, 1875
MaeIII GTNAC 5 cut(s) 564, 893, 1438, 1473, 1704
MalI GATC 9 cut(s) 356, 705, 795, 870, 1050, 1332, 1542, 1551, 1591
MboI GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
MflI RGATCY 4 cut(s) 354, 868, 1048, 1540
MhlI GDGCHC 1 cut(s) 684
MlyI GAGTC 3 cut(s) 370, 565, 579
MmeI TCCRAC 3 cut(s) 152, 562, 1195
Mph1103I ATGCAT 1 cut(s) 967
MseI TTAA 8 cut(s) 66, 657, 686, 830, 888, 1167, 1337, 1398
MslI CAYNNNNRTG 4 cut(s) 252, 268, 1797, 1852
MspA1I CMGCKG 1 cut(s) 1825
MspR9I CCNGG 3 cut(s) 93, 1100, 1256
MvaI CCWGG 3 cut(s) 93, 1100, 1256
MwoI GCNNNNNNNGC 6 cut(s) 281, 441, 1148, 1204, 1647, 1681
NcoI CCATGG 1 cut(s) 285
NdeI CATATG 2 cut(s) 222, 961
NdeII GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
NlaIV GGNNCC 5 cut(s) 283, 417, 682, 1260, 1489
NmeAIII GCCGAG 2 cut(s) 121, 1069
NmuCI GTSAC 3 cut(s) 564, 893, 1704
NsbI TGCGCA 1 cut(s) 227
NsiI ATGCAT 1 cut(s) 967
NspI RCATGY 3 cut(s) 1151, 1574, 1796
OliI CACNNNNGTG 1 cut(s) 268
PaqCI CACCTGC 1 cut(s) 1787
PciSI GCTCTTC 1 cut(s) 1620
PfeI GAWTC 6 cut(s) 101, 498, 863, 1183, 1480, 1844
PflMI CCANNNNNTGG 1 cut(s) 371
PfoI TCCNGGA 1 cut(s) 1254
PkrI GCNGC 4 cut(s) 199, 407, 1713, 1872
PleI GAGTC 3 cut(s) 370, 565, 579
PpsI GAGTC 3 cut(s) 370, 565, 579
Psp1406I AACGTT 1 cut(s) 674
Psp6I CCWGG 3 cut(s) 91, 1098, 1254
PspGI CCWGG 3 cut(s) 91, 1098, 1254
PspN4I GGNNCC 5 cut(s) 283, 417, 682, 1260, 1489
PspOMI GGGCCC 1 cut(s) 680
PspPI GGNCC 4 cut(s) 415, 680, 681, 1456
PstNI CAGNNNCTG 1 cut(s) 872
PsuI RGATCY 4 cut(s) 354, 868, 1048, 1540
PvuII CAGCTG 1 cut(s) 1825
RsaI GTAC 8 cut(s) 321, 636, 995, 1031, 1222, 1231, 1358, 1865
RsaNI GTAC 8 cut(s) 320, 635, 994, 1030, 1221, 1230, 1357, 1864
RseI CAYNNNNRTG 4 cut(s) 252, 268, 1797, 1852
SapI GCTCTTC 1 cut(s) 1620
SaqAI TTAA 8 cut(s) 66, 657, 686, 830, 888, 1167, 1337, 1398
SatI GCNGC 4 cut(s) 198, 406, 1712, 1871
Sau3AI GATC 9 cut(s) 354, 703, 793, 868, 1048, 1330, 1540, 1549, 1589
Sau96I GGNCC 4 cut(s) 415, 680, 681, 1456
ScaI AGTACT 2 cut(s) 995, 1358
SchI GAGTC 3 cut(s) 370, 565, 579
ScrFI CCNGG 3 cut(s) 93, 1100, 1256
SduI GDGCHC 1 cut(s) 684
SexAI ACCWGGT 1 cut(s) 91
SfaNI GCATC 5 cut(s) 116, 974, 1644, 1662, 1671
SinI GGWCC 2 cut(s) 415, 1456
SmiMI CAYNNNNRTG 4 cut(s) 252, 268, 1797, 1852
SmlI CTYRAG 1 cut(s) 1510
SmoI CTYRAG 1 cut(s) 1510
SsiI CCGC 4 cut(s) 198, 405, 408, 1119
SspI AATATT 2 cut(s) 64, 1039
SspMI CTAG 4 cut(s) 669, 854, 1805, 1882
StyD4I CCNGG 3 cut(s) 91, 1098, 1254
StyI CCWWGG 1 cut(s) 285
TaaI ACNGT 4 cut(s) 369, 893, 1229, 1351
TaiI ACGT 4 cut(s) 630, 677, 1838, 1878
TaqI TCGA 3 cut(s) 394, 611, 1412
TaqII GACCGA 1 cut(s) 45
TatI WGTACW 4 cut(s) 993, 1220, 1356, 1863
TauI GCSGC 2 cut(s) 200, 408
TfiI GAWTC 6 cut(s) 101, 498, 863, 1183, 1480, 1844
Tru1I TTAA 8 cut(s) 66, 657, 686, 830, 888, 1167, 1337, 1398
Tru9I TTAA 8 cut(s) 66, 657, 686, 830, 888, 1167, 1337, 1398
TscAI CASTG 6 cut(s) 43, 573, 743, 1356, 1563, 1619
TseFI GTSAC 3 cut(s) 564, 893, 1704
TseI GCWGC 2 cut(s) 1711, 1870
Tsp45I GTSAC 3 cut(s) 564, 893, 1704
TspDTI ATGAA 6 cut(s) 60, 714, 926, 1512, 1785, 1827
TspGWI ACGGA 4 cut(s) 342, 770, 944, 1426
TspRI CASTG 6 cut(s) 43, 573, 743, 1356, 1563, 1619
Van91I CCANNNNNTGG 1 cut(s) 371
VpaK11BI GGWCC 2 cut(s) 415, 1456
XapI RAATTY 1 cut(s) 918
XceI RCATGY 3 cut(s) 1151, 1574, 1796
XspI CTAG 4 cut(s) 669, 854, 1805, 1882
ZrmI AGTACT 2 cut(s) 995, 1358
Zsp2I ATGCAT 1 cut(s) 967
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.