Rh2DG658300

MORC family CW-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2D
Physical Location & Seq
Reverse (-)
88478920 .. 88493299
14380 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2DG658300.1

Sequence Viewer

Length: 1890 bp
ATGTACGTGTTGGTTGCTGGAAACTTTGAAACAATGAGCAATTCAAACTTTGTAGATTTGTCTAGTGATGATGATGATGAAACCGGCGTTTCGAACTCTGTTTCTCCAACGCCAATATCTCGGCAATTCTGGAAAGCTGGAAACTACAAGAGTGCACAGAGACAGGGTCGTAAAGCCGGAAATAAAAATCAACAAAACCATATGCGGATACACCCTATGTTCCTTCACTCAAATGCCACTTCACATAAGTGGGCTTTTGGAGGCATAGCAGAGTTGCTCGACAATGCAGTTGATGAGATACAAAATGGAGCAACTTATGTTTCTATAGACAAGAGTTCTACTCCATGGGATGGGAAGCCAGCTTTGTTAATTCAAGATGACGGCAGCAGAATGGACCCAGCGGCTATAAGGAGCTGTATGAGCTTTGGATTTACAGATAAGATATCAAAATCGACCATTGGACAGTATATGAATTATGGAAATGGTTTCAAGACCAGCTCTATGAGACTTGGAGCAGATGTTATGGTCTTCAGTCGCCACAGGGCACTGACTCAAAGTGTTGGACTCCTTTCATATACATTTTTGAGTCAGATGGGCTATGATGAGATACTTGTATCAATGGTGGATTATGAGTTTAACATATCATCTGGAACATATCAGCCCTTACTGCAACATGGTAAACAACAATTTTCCTCTAATTTGACCATGATGTTGCAATGGTCTCCTTATTCAACAGAAGAAGAGCTGCTGAAGCAATTTGATGATATAGGGCCTCATGGAATGAAAATTGTCATATACAGTCTTTGGTTGCATGATGATGGGGATATGGAACTAGATTTCAATTTTGATCCTGAGGATATATGTATCAATGGTGGAAAAACAAGTGAGAAAAGAAAACCAATTTTTTACCATCATGTGGCTAACCAATTTCAGTTCTCTCTTCGTGGACAAGTGGTTGAACACTACTATATTGCCTTGGATCTTAAGTTTCATGAGATCATCAAGTATAGGCCACAAACTGATGAGTATATGAAGTCCGTGTTAACTACCGATATAGGGTTTCTGAAGGAAGCTCCACATGTGAATATTCATGGTGTTTTGGAAGCCAATCATATCCAGCCTACTCACAATAAGCAAGATTTTGAGAAAACTCCCCTCTTCCAAAAGCTTGAAGATCGTTTGAGGCAAATGGCGTTGGAGTATTGGCACCTACACTGTGAATTAATTGGTTATCCGAAACTTAAAACAAATCACTGCATAGAATTGGATCATCAGGAATCACCTTCTTCAAGAACTCGAAATCGCTTATTGTACCAGCCTGAGTCACTGGATCATGGTTCTCAAAATGGAAGTTCAGGAGCATCTTTGAATGTAGTGGGTTTCTTAGAAGATTCTGAAGTCACTACATTAGAAGTCTCATCTGGAGGACTGGGAAAGTCAACAGACATCCACAAAGTCAGGAACCAAGAAGGAGTCATCGTAAAGAGGAAGCATCTTGATCCTCCAGTAAGCCTACAACATGCAAAAAGGCACATGGGACCCTGTGGAACTCAGATCGAACACTATACTGAACAGCTTGGTAGCACTGTAGTTTCACAGAAGATAAAACTGATGCAAACAAATAAAAGGCTCCGTTCACAGCTGTCAGAAAAGGAGAAAACGGTGGAAGAACTCAATTTGAAGGTTCAACAACTTAGAAGTGAACAAGAGAGCTTACGGCTAGAATTCACACAGATGCTGCTCGAAGCGAAATTGTTGGAGGGGAACAGTATAGATTTTTTTCTAGACTTTCTAGATAAAGGAGAAGAAATCACTTTTAACATTTGTGTAAATCTATTGGCATTCTCCTTAGGTCACCAACCTTACCCTTTTTCAGAGGAGGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

629

Amino Acids

71.57

Weight (kDa)

5.88

Isoelectric Point (pI)

46.13

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
HATPase_c_3 PF13589 88 - 199 2.9e-11 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase
Morc6_S5 PF17942 301 - 366 2.5e-12 Morc6 ribosomal protein S5 domain 2-like
Morc6_S5 PF17942 363 - 402 4.7e-13 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1206
AccB7I CCANNNNNTGG 2 cut(s) 350, 916
AciI CCGC 2 cut(s) 205, 401
AclWI GGATC 5 cut(s) 842, 987, 1275, 1338, 1493
AcsI RAATTY 1 cut(s) 1724
AcuI CTGAAG 4 cut(s) 514, 770, 1085, 1416
AfaI GTAC 2 cut(s) 5, 1313
AfiI CCNNNNNNNGG 3 cut(s) 350, 916, 1056
AflII CTTAAG 1 cut(s) 983
AflIII ACRYGT 2 cut(s) 6, 1078
AleI CACNNNNGTG 1 cut(s) 247
Alw21I GWGCWC 1 cut(s) 157
Alw26I GTCTC 4 cut(s) 154, 499, 726, 1420
Alw44I GTGCAC 1 cut(s) 153
AlwI GGATC 5 cut(s) 842, 987, 1275, 1338, 1493
AlwNI CAGNNNCTG 1 cut(s) 1738
AoxI GGCC 2 cut(s) 770, 1010
ApaLI GTGCAC 1 cut(s) 153
ApeKI GCWGC 3 cut(s) 384, 745, 1738
ApoI RAATTY 1 cut(s) 1724
AseI ATTAAT 1 cut(s) 1223
AspS9I GGNCC 3 cut(s) 394, 770, 1538
AsuHPI GGTGA 2 cut(s) 1272, 1847
AsuII TTCGAA 1 cut(s) 92
AvaII GGWCC 2 cut(s) 394, 1538
AxyI CCTNAGG 2 cut(s) 852, 1849
BaeGI GKGCMC 2 cut(s) 157, 547
BanI GGYRCC 1 cut(s) 1206
BbsI GAAGAC 1 cut(s) 520
Bbv12I GWGCWC 1 cut(s) 157
BbvI GCAGC 3 cut(s) 396, 732, 1725
BccI CCATC 4 cut(s) 344, 586, 812, 918
BceAI ACGGC 2 cut(s) 397, 1733
BciVI GTATCC 1 cut(s) 201
BcoDI GTCTC 4 cut(s) 154, 499, 726, 1420
BfaI CTAG 5 cut(s) 63, 833, 1721, 1784, 1793
BfmI CTRYAG 2 cut(s) 324, 1587
BfrI CTTAAG 1 cut(s) 983
BfuI GTATCC 1 cut(s) 201
BisI GCNGC 4 cut(s) 385, 402, 746, 1739
BlsI GCNGC 4 cut(s) 386, 403, 747, 1740
Bme18I GGWCC 2 cut(s) 394, 1538
BmgT120I GGNCC 3 cut(s) 394, 770, 1538
BmiI GGNNCC 6 cut(s) 396, 1208, 1463, 1539, 1540, 1631
BmrI ACTGGG 1 cut(s) 1439
BmsI GCATC 4 cut(s) 1370, 1501, 1602, 1725
BmuI ACTGGG 1 cut(s) 1439
BpiI GAAGAC 1 cut(s) 520
BplI GAGNNNNNCTC 2 cut(s) 325, 357
BpmI CTGGAG 2 cut(s) 1443, 1488
Bpu14I TTCGAA 1 cut(s) 92
BsaAI YACGTR 1 cut(s) 7
BsaI GGTCTC 1 cut(s) 726
BsaJI CCNNGG 2 cut(s) 344, 975
BsaXI ACNNNNNCTCC 4 cut(s) 504, 534, 1464, 1494
Bsc4I CCNNNNNNNGG 3 cut(s) 350, 916, 1056
Bse118I RCCGGY 1 cut(s) 83
Bse1I ACTGG 3 cut(s) 1332, 1434, 1505
Bse21I CCTNAGG 2 cut(s) 852, 1849
Bse3DI GCAATG 1 cut(s) 722
BseDI CCNNGG 2 cut(s) 344, 975
BseGI GGATG 2 cut(s) 355, 1446
BseLI CCNNNNNNNGG 3 cut(s) 350, 916, 1056
BseMI GCAATG 1 cut(s) 722
BseMII CTCAG 3 cut(s) 843, 1311, 1565
BseNI ACTGG 3 cut(s) 1332, 1434, 1505
BseSI GKGCMC 2 cut(s) 157, 547
BseXI GCAGC 3 cut(s) 396, 732, 1725
BseYI CCCAGC 1 cut(s) 397
BshFI GGCC 2 cut(s) 772, 1012
BshNI GGYRCC 1 cut(s) 1206
BsiHKAI GWGCWC 1 cut(s) 157
BsiSI CCGG 2 cut(s) 84, 177
BslFI GGGAC 1 cut(s) 1551
BslI CCNNNNNNNGG 3 cut(s) 350, 916, 1056
BsmAI GTCTC 4 cut(s) 154, 499, 726, 1420
BsmFI GGGAC 1 cut(s) 1551
BsmI GAATGC 1 cut(s) 1841
BsnI GGCC 2 cut(s) 772, 1012
Bso31I GGTCTC 1 cut(s) 726
Bsp119I TTCGAA 1 cut(s) 92
Bsp1286I GDGCHC 2 cut(s) 157, 547
Bsp143I GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
Bsp19I CCATGG 1 cut(s) 344
BspACI CCGC 2 cut(s) 205, 401
BspANI GGCC 2 cut(s) 772, 1012
BspCNI CTCAG 3 cut(s) 844, 1312, 1564
BspHI TCATGA 1 cut(s) 991
BspLI GGNNCC 6 cut(s) 396, 1208, 1463, 1539, 1540, 1631
BspPI GGATC 5 cut(s) 842, 987, 1275, 1338, 1493
BspQI GCTCTTC 1 cut(s) 735
BspT104I TTCGAA 1 cut(s) 92
BspT107I GGYRCC 1 cut(s) 1206
BspTI CTTAAG 1 cut(s) 983
BspTNI GGTCTC 1 cut(s) 726
BsrDI GCAATG 1 cut(s) 722
BsrFI RCCGGY 1 cut(s) 83
BsrI ACTGG 3 cut(s) 1332, 1434, 1505
BssAI RCCGGY 1 cut(s) 83
BssECI CCNNGG 2 cut(s) 344, 975
BssMI GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
BssT1I CCWWGG 2 cut(s) 344, 975
Bst4CI ACNGT 6 cut(s) 465, 800, 1217, 1588, 1663, 1769
Bst6I CTCTTC 3 cut(s) 735, 945, 1163
BstAFI CTTAAG 1 cut(s) 983
BstBAI YACGTR 1 cut(s) 7
BstBI TTCGAA 1 cut(s) 92
BstC8I GCNNGC 1 cut(s) 360
BstDEI CTNAG 6 cut(s) 852, 1320, 1384, 1551, 1694, 1849
BstDSI CCRYGG 1 cut(s) 344
BstEII GGTNACC 1 cut(s) 1853
BstF5I GGATG 2 cut(s) 355, 1446
BstKTI GATC 8 cut(s) 850, 982, 999, 1177, 1270, 1333, 1501, 1557
BstMAI GTCTC 4 cut(s) 154, 499, 726, 1420
BstMBI GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
BstMWI GCNNNNNNNGC 3 cut(s) 420, 667, 751
BstNSI RCATGY 2 cut(s) 1082, 1523
BstPI GGTNACC 1 cut(s) 1853
BstSFI CTRYAG 2 cut(s) 324, 1587
BstSLI GKGCMC 2 cut(s) 157, 547
BstV1I GCAGC 3 cut(s) 396, 732, 1725
BstV2I GAAGAC 1 cut(s) 520
BstX2I RGATCY 1 cut(s) 979
BstYI RGATCY 1 cut(s) 979
Bsu36I CCTNAGG 2 cut(s) 852, 1849
BsuI GTATCC 1 cut(s) 201
BsuRI GGCC 2 cut(s) 772, 1012
BtgI CCRYGG 1 cut(s) 344
BtsCI GGATG 2 cut(s) 355, 1446
BtsI GCAGTG 1 cut(s) 1252
BtsIMutI CAGTG 5 cut(s) 545, 1213, 1252, 1325, 1584
Cac8I GCNNGC 1 cut(s) 360
CaiI CAGNNNCTG 1 cut(s) 1738
CciI TCATGA 1 cut(s) 991
Cfr10I RCCGGY 1 cut(s) 83
Cfr13I GGNCC 3 cut(s) 394, 770, 1538
Csp6I GTAC 2 cut(s) 4, 1312
CviQI GTAC 2 cut(s) 4, 1312
DdeI CTNAG 6 cut(s) 852, 1320, 1384, 1551, 1694, 1849
DpnI GATC 8 cut(s) 849, 981, 998, 1176, 1269, 1332, 1500, 1556
DpnII GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
Eam1104I CTCTTC 3 cut(s) 735, 945, 1163
EarI CTCTTC 3 cut(s) 735, 945, 1163
Eco130I CCWWGG 2 cut(s) 344, 975
Eco31I GGTCTC 1 cut(s) 726
Eco32I GATATC 1 cut(s) 444
Eco47I GGWCC 2 cut(s) 394, 1538
Eco57I CTGAAG 4 cut(s) 514, 770, 1085, 1416
Eco81I CCTNAGG 2 cut(s) 852, 1849
Eco91I GGTNACC 1 cut(s) 1853
EcoO109I RGGNCCY 2 cut(s) 770, 1538
EcoO65I GGTNACC 1 cut(s) 1853
EcoRI GAATTC 1 cut(s) 1724
EcoRV GATATC 1 cut(s) 444
EcoT14I CCWWGG 2 cut(s) 344, 975
ErhI CCWWGG 2 cut(s) 344, 975
FaqI GGGAC 1 cut(s) 1551
FauNDI CATATG 1 cut(s) 201
Fnu4HI GCNGC 4 cut(s) 385, 402, 746, 1739
FokI GGATG 2 cut(s) 362, 1433
Fsp4HI GCNGC 4 cut(s) 385, 402, 746, 1739
FspBI CTAG 5 cut(s) 63, 833, 1721, 1784, 1793
GluI GCNGC 4 cut(s) 385, 402, 746, 1739
GsaI CCCAGC 1 cut(s) 401
GsuI CTGGAG 2 cut(s) 1443, 1488
HaeIII GGCC 2 cut(s) 772, 1012
HapII CCGG 2 cut(s) 84, 177
HincII GTYRAC 2 cut(s) 1044, 1440
HindII GTYRAC 2 cut(s) 1044, 1440
HindIII AAGCTT 1 cut(s) 1166
HinfI GANTC 7 cut(s) 550, 564, 586, 1277, 1322, 1391, 1473
HpaI GTTAAC 1 cut(s) 1044
HpaII CCGG 2 cut(s) 84, 177
HphI GGTGA 2 cut(s) 1272, 1847
Hpy166II GTNNAC 7 cut(s) 155, 680, 947, 1044, 1440, 1637, 1703
Hpy188I TCNGA 7 cut(s) 591, 1065, 1236, 1396, 1554, 1648, 1876
Hpy8I GTNNAC 7 cut(s) 155, 680, 947, 1044, 1440, 1637, 1703
HpyAV CCTTC 5 cut(s) 233, 1060, 1293, 1463, 1675
HpyCH4III ACNGT 6 cut(s) 465, 800, 1217, 1588, 1663, 1769
HpyCH4IV ACGT 1 cut(s) 6
HpyCH4V TGCA 8 cut(s) 155, 287, 670, 715, 811, 1257, 1523, 1615
HpyF10VI GCNNNNNNNGC 3 cut(s) 420, 667, 751
HpyF3I CTNAG 6 cut(s) 852, 1320, 1384, 1551, 1694, 1849
HpySE526I ACGT 1 cut(s) 6
KflI GGGWCCC 1 cut(s) 1538
KspAI GTTAAC 1 cut(s) 1044
Kzo9I GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
LguI GCTCTTC 1 cut(s) 735
LmnI GCTCC 6 cut(s) 308, 411, 512, 1078, 1358, 1635
Lsp1109I GCAGC 3 cut(s) 396, 732, 1725
LweI GCATC 4 cut(s) 1370, 1501, 1602, 1725
MaeI CTAG 5 cut(s) 63, 833, 1721, 1784, 1793
MaeII ACGT 1 cut(s) 6
MaeIII GTNAC 3 cut(s) 1323, 1399, 1853
MalI GATC 8 cut(s) 849, 981, 998, 1176, 1269, 1332, 1500, 1556
MboI GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
MflI RGATCY 1 cut(s) 979
MhlI GDGCHC 2 cut(s) 157, 547
MlyI GAGTC 5 cut(s) 544, 558, 595, 1331, 1482
MmeI TCCRAC 4 cut(s) 131, 541, 1176, 1737
MseI TTAA 7 cut(s) 368, 636, 984, 1043, 1223, 1242, 1818
MslI CAYNNNNRTG 4 cut(s) 231, 247, 816, 1733
MspA1I CMGCKG 2 cut(s) 401, 1642
MspCI CTTAAG 1 cut(s) 983
MspI CCGG 2 cut(s) 84, 177
Mva1269I GAATGC 1 cut(s) 1841
MwoI GCNNNNNNNGC 3 cut(s) 420, 667, 751
NcoI CCATGG 1 cut(s) 344
NdeI CATATG 1 cut(s) 201
NdeII GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
NlaIV GGNNCC 6 cut(s) 396, 1208, 1463, 1539, 1540, 1631
NmeAIII GCCGAG 1 cut(s) 100
NmuCI GTSAC 3 cut(s) 1323, 1399, 1853
NspI RCATGY 2 cut(s) 1082, 1523
NspV TTCGAA 1 cut(s) 92
OliI CACNNNNGTG 1 cut(s) 247
PagI TCATGA 1 cut(s) 991
PciI ACATGT 1 cut(s) 1078
PciSI GCTCTTC 1 cut(s) 735
PctI GAATGC 1 cut(s) 1841
PfeI GAWTC 2 cut(s) 1277, 1391
PflFI GACNNNGTC 1 cut(s) 165
PflMI CCANNNNNTGG 2 cut(s) 350, 916
PkrI GCNGC 4 cut(s) 386, 403, 747, 1740
PleI GAGTC 5 cut(s) 544, 558, 594, 1330, 1481
PpsI GAGTC 5 cut(s) 544, 558, 594, 1330, 1481
Ppu21I YACGTR 1 cut(s) 7
PpuMI RGGWCCY 1 cut(s) 1538
PscI ACATGT 1 cut(s) 1078
PshBI ATTAAT 1 cut(s) 1223
Psp5II RGGWCCY 1 cut(s) 1538
PspEI GGTNACC 1 cut(s) 1853
PspFI CCCAGC 1 cut(s) 397
PspN4I GGNNCC 6 cut(s) 396, 1208, 1463, 1539, 1540, 1631
PspPI GGNCC 3 cut(s) 394, 770, 1538
PspPPI RGGWCCY 1 cut(s) 1538
PstNI CAGNNNCTG 1 cut(s) 1738
PsuI RGATCY 1 cut(s) 979
PsyI GACNNNGTC 1 cut(s) 165
PvuII CAGCTG 1 cut(s) 1642
RsaI GTAC 2 cut(s) 5, 1313
RsaNI GTAC 2 cut(s) 4, 1312
RseI CAYNNNNRTG 4 cut(s) 231, 247, 816, 1733
SapI GCTCTTC 1 cut(s) 735
SaqAI TTAA 7 cut(s) 368, 636, 984, 1043, 1223, 1242, 1818
SatI GCNGC 4 cut(s) 385, 402, 746, 1739
Sau3AI GATC 8 cut(s) 847, 979, 996, 1174, 1267, 1330, 1498, 1554
Sau96I GGNCC 3 cut(s) 394, 770, 1538
SchI GAGTC 5 cut(s) 544, 558, 595, 1331, 1482
SduI GDGCHC 2 cut(s) 157, 547
SfaNI GCATC 4 cut(s) 1370, 1501, 1602, 1725
SfcI CTRYAG 2 cut(s) 324, 1587
SfuI TTCGAA 1 cut(s) 92
SinI GGWCC 2 cut(s) 394, 1538
SmiMI CAYNNNNRTG 4 cut(s) 231, 247, 816, 1733
SmlI CTYRAG 1 cut(s) 983
SmoI CTYRAG 1 cut(s) 983
SsiI CCGC 2 cut(s) 205, 401
SspI AATATT 1 cut(s) 1087
SspMI CTAG 5 cut(s) 63, 833, 1721, 1784, 1793
StyI CCWWGG 2 cut(s) 344, 975
TaaI ACNGT 6 cut(s) 465, 800, 1217, 1588, 1663, 1769
TaiI ACGT 1 cut(s) 9
TaqI TCGA 6 cut(s) 92, 279, 452, 1297, 1557, 1743
TauI GCSGC 1 cut(s) 404
TfiI GAWTC 2 cut(s) 1277, 1391
Tru1I TTAA 7 cut(s) 368, 636, 984, 1043, 1223, 1242, 1818
Tru9I TTAA 7 cut(s) 368, 636, 984, 1043, 1223, 1242, 1818
TscAI CASTG 5 cut(s) 552, 1220, 1259, 1332, 1591
TseFI GTSAC 3 cut(s) 1323, 1399, 1853
TseI GCWGC 3 cut(s) 384, 745, 1738
Tsp45I GTSAC 3 cut(s) 1323, 1399, 1853
TspDTI ATGAA 7 cut(s) 93, 485, 561, 797, 980, 1046, 1079
TspGWI ACGGA 2 cut(s) 1027, 1622
TspRI CASTG 5 cut(s) 552, 1220, 1259, 1332, 1591
Tth111I GACNNNGTC 1 cut(s) 165
Van91I CCANNNNNTGG 2 cut(s) 350, 916
Vha464I CTTAAG 1 cut(s) 983
VneI GTGCAC 1 cut(s) 153
VpaK11BI GGWCC 2 cut(s) 394, 1538
VspI ATTAAT 1 cut(s) 1223
XapI RAATTY 1 cut(s) 1724
XbaI TCTAGA 2 cut(s) 1783, 1792
XceI RCATGY 2 cut(s) 1082, 1523
XspI CTAG 5 cut(s) 63, 833, 1721, 1784, 1793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.