Rh2CG610400

MORC family CW-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2C
Physical Location & Seq
Reverse (-)
78757845 .. 78771290
13446 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2CG610400.1

Sequence Viewer

Length: 1758 bp
ATGAGCAATTCAAACTTTGTAGATTTGTCTAGTGATGATGATGATGAAACCGGCGTTTCGAACTCTGTTTCTCCAACGCCAATATCTCGGCAATTCTGGAAAGCTGGAAACTACAAGAGTGCACAGAGACAGGGTCGTAAAGCCGGAAATAAAAATCAACAAAACCATATGCGGATACACCCTATGTTCCTTCACTCAAATGCCACTTCACATAAGTGGGCTTTTGGAGGCATAGCAGAGTTGCTCGACAATGCAGTTGATGAGATACAAAATGGAGCAACTTATGTTTCTATAGACAAGAGTTCTACTCCATGGGATGGGAAGCCAGCTTTGTTAATTCAAGATGGAAATGGTTTCAAGACCAGCTCTATGAGACTTGGAGCAGATGTTATGGTCTTCAGTCGCCACAGGGCACTGACTCAAAGTGTTGGACTCCTTTCATATACATTTTTGAGTCAGATGGGCTATGATGAGATACTTGTATCAATGGTGGATTATGAGTTTAACATATCATCTGGAACATATCAGCCCTTACTGCAACATGGTAAACAACAATTTTCCTCTAATTTGACCATGATGTTGCAATGGTCTCCTTATTCAACAGAAGAAGAGCTGCTGAAGCAATTTGATGATATAGGGCCTCATGGAATGAAAATTGTCATATACAGTCTTTGGTTGCATGATGATGGGGATATGGAACTAGATTTCAATTTTGATCCTGAGGATATATGTATCAATGGTGGAAAAACAAGTGAGAAAAGAAAACCAATTTTTTACCATCATGTGGCTAACCAATTTCAGTTCTCTCTTCGTGGACAAGTGGTTGAACACTACTATATTGCCTTGGATCTTAAGTTTCATGAGATCATCAAGTATAGGCCACAAACTGATGAGTATATGAAGTCCGTGTTAACTACCGATATAGGGTTTCTGAAGGAAGCTCCACATGTGAATATTCATGGTGTTTTGGAAGCCAATCATATCCAGCCTACTCACAATAAGCAAGATTTTGAGAAAACTCCCCTCTTCCAAAAGCTTGAAGATCGTTTGAGGCAAATGGCGTTGGAGTATTGGCACCTACACTGTGAATTAATTGGTTATCCGAAACTTAAAACAAATCACTGCATAGAATTGGATCATCAGGAATCACCTTCTTCAAGAACTCGAAATCGCTTATTGTACCAGCCTGAGTCACTGGATCATGGTTCTCAAAATGGAAGTTCAGGAGCATCTTTGAATGTAGTGGGTTTCTTAGAAGATTCTGAAGTCACTACATTAGAAGTCTCATCTGGAGGACTGGGAAAGTCAACAGACATCCACAAAGTCAGGAACCAAGAAGGAGTCATCGTAAAGAGGAAGCATCTTGATCCTCCAGTAAGCCTACAACATGCAAAAAGGCACATGGGACCCTGTGGAACTCAGATCGAACACTATACTGAACAGCTTGGTAGCACTGTAGTTTCACAGAAGATAAAACTGATGCAAACAAATAAAAGGCTCCGTTCACAGCTGTCAGAAAAGGAGAAAACGGTGGAAGAACTCAATTTGAAGGTTCAACAACTTAGAAGTGAACAAGAGAGCTTACGGCTAGAATTCACACAGATGCTGCTCGAAGCGAAATTGTTGGAGGGGAACAGTATAGATTTTTTTCTAGACTTTCTAGATAAAGGAGAAGAAATCACTTTTAACATTTGTGTAAATCTATTGGCATTCTCCTTAGGTCACCAACCTTACCCTTTTTCAGAGGAGGGTAGATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

585

Amino Acids

66.69

Weight (kDa)

5.88

Isoelectric Point (pI)

45.39

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Morc6_S5 PF17942 257 - 322 2.2e-12 Morc6 ribosomal protein S5 domain 2-like
Morc6_S5 PF17942 319 - 358 4.3e-13 Morc6 ribosomal protein S5 domain 2-like
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 1074
AccB7I CCANNNNNTGG 2 cut(s) 317, 784
AciI CCGC 1 cut(s) 172
AclWI GGATC 5 cut(s) 710, 855, 1143, 1206, 1361
AcsI RAATTY 1 cut(s) 1592
AcuI CTGAAG 4 cut(s) 382, 638, 953, 1284
AfaI GTAC 1 cut(s) 1181
AfiI CCNNNNNNNGG 3 cut(s) 317, 784, 924
AflII CTTAAG 1 cut(s) 851
AflIII ACRYGT 1 cut(s) 946
AleI CACNNNNGTG 1 cut(s) 214
AluBI AGCT 9 cut(s) 104, 329, 366, 613, 941, 1036, 1444, 1510, 1581
AluI AGCT 9 cut(s) 104, 329, 366, 613, 941, 1036, 1444, 1510, 1581
Alw21I GWGCWC 1 cut(s) 124
Alw26I GTCTC 4 cut(s) 121, 367, 594, 1288
Alw44I GTGCAC 1 cut(s) 120
AlwI GGATC 5 cut(s) 710, 855, 1143, 1206, 1361
AlwNI CAGNNNCTG 1 cut(s) 1606
AoxI GGCC 2 cut(s) 638, 878
ApaLI GTGCAC 1 cut(s) 120
ApeKI GCWGC 2 cut(s) 613, 1606
ApoI RAATTY 1 cut(s) 1592
AseI ATTAAT 1 cut(s) 1091
AspS9I GGNCC 2 cut(s) 638, 1406
AsuHPI GGTGA 2 cut(s) 1140, 1715
AsuII TTCGAA 1 cut(s) 59
AvaII GGWCC 1 cut(s) 1406
AxyI CCTNAGG 2 cut(s) 720, 1717
BaeGI GKGCMC 2 cut(s) 124, 415
BanI GGYRCC 1 cut(s) 1074
BbsI GAAGAC 1 cut(s) 388
Bbv12I GWGCWC 1 cut(s) 124
BbvI GCAGC 2 cut(s) 600, 1593
BccI CCATC 5 cut(s) 311, 338, 454, 680, 786
BceAI ACGGC 1 cut(s) 1601
BciVI GTATCC 1 cut(s) 168
BcoDI GTCTC 4 cut(s) 121, 367, 594, 1288
BfaI CTAG 5 cut(s) 30, 701, 1589, 1652, 1661
BfmI CTRYAG 2 cut(s) 291, 1455
BfrI CTTAAG 1 cut(s) 851
BfuI GTATCC 1 cut(s) 168
BisI GCNGC 2 cut(s) 614, 1607
BlsI GCNGC 2 cut(s) 615, 1608
Bme18I GGWCC 1 cut(s) 1406
BmgT120I GGNCC 2 cut(s) 638, 1406
BmiI GGNNCC 5 cut(s) 1076, 1331, 1407, 1408, 1499
BmrI ACTGGG 1 cut(s) 1307
BmsI GCATC 4 cut(s) 1238, 1369, 1470, 1593
BmuI ACTGGG 1 cut(s) 1307
BpiI GAAGAC 1 cut(s) 388
BplI GAGNNNNNCTC 2 cut(s) 292, 324
BpmI CTGGAG 2 cut(s) 1311, 1356
Bpu14I TTCGAA 1 cut(s) 59
BsaI GGTCTC 1 cut(s) 594
BsaJI CCNNGG 2 cut(s) 311, 843
BsaXI ACNNNNNCTCC 4 cut(s) 372, 402, 1332, 1362
Bsc4I CCNNNNNNNGG 3 cut(s) 317, 784, 924
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 3 cut(s) 1200, 1302, 1373
Bse21I CCTNAGG 2 cut(s) 720, 1717
Bse3DI GCAATG 1 cut(s) 590
BseDI CCNNGG 2 cut(s) 311, 843
BseGI GGATG 2 cut(s) 322, 1314
BseLI CCNNNNNNNGG 3 cut(s) 317, 784, 924
BseMI GCAATG 1 cut(s) 590
BseMII CTCAG 3 cut(s) 711, 1179, 1433
BseNI ACTGG 3 cut(s) 1200, 1302, 1373
BseSI GKGCMC 2 cut(s) 124, 415
BseXI GCAGC 2 cut(s) 600, 1593
BshFI GGCC 2 cut(s) 640, 880
BshNI GGYRCC 1 cut(s) 1074
BsiHKAI GWGCWC 1 cut(s) 124
BsiSI CCGG 2 cut(s) 51, 144
BslFI GGGAC 1 cut(s) 1419
BslI CCNNNNNNNGG 3 cut(s) 317, 784, 924
BsmAI GTCTC 4 cut(s) 121, 367, 594, 1288
BsmFI GGGAC 1 cut(s) 1419
BsmI GAATGC 1 cut(s) 1709
BsnI GGCC 2 cut(s) 640, 880
Bso31I GGTCTC 1 cut(s) 594
Bsp119I TTCGAA 1 cut(s) 59
Bsp1286I GDGCHC 2 cut(s) 124, 415
Bsp143I GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
Bsp19I CCATGG 1 cut(s) 311
BspACI CCGC 1 cut(s) 172
BspANI GGCC 2 cut(s) 640, 880
BspCNI CTCAG 3 cut(s) 712, 1180, 1432
BspHI TCATGA 1 cut(s) 859
BspLI GGNNCC 5 cut(s) 1076, 1331, 1407, 1408, 1499
BspPI GGATC 5 cut(s) 710, 855, 1143, 1206, 1361
BspQI GCTCTTC 1 cut(s) 603
BspT104I TTCGAA 1 cut(s) 59
BspT107I GGYRCC 1 cut(s) 1074
BspTI CTTAAG 1 cut(s) 851
BspTNI GGTCTC 1 cut(s) 594
BsrDI GCAATG 1 cut(s) 590
BsrFI RCCGGY 1 cut(s) 50
BsrI ACTGG 3 cut(s) 1200, 1302, 1373
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 2 cut(s) 311, 843
BssMI GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
BssT1I CCWWGG 2 cut(s) 311, 843
Bst4CI ACNGT 5 cut(s) 668, 1085, 1456, 1531, 1637
Bst6I CTCTTC 3 cut(s) 603, 813, 1031
BstAFI CTTAAG 1 cut(s) 851
BstBI TTCGAA 1 cut(s) 59
BstC8I GCNNGC 1 cut(s) 327
BstDEI CTNAG 6 cut(s) 720, 1188, 1252, 1419, 1562, 1717
BstDSI CCRYGG 1 cut(s) 311
BstEII GGTNACC 1 cut(s) 1721
BstF5I GGATG 2 cut(s) 322, 1314
BstKTI GATC 8 cut(s) 718, 850, 867, 1045, 1138, 1201, 1369, 1425
BstMAI GTCTC 4 cut(s) 121, 367, 594, 1288
BstMBI GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
BstMWI GCNNNNNNNGC 2 cut(s) 535, 619
BstNSI RCATGY 2 cut(s) 950, 1391
BstPI GGTNACC 1 cut(s) 1721
BstSFI CTRYAG 2 cut(s) 291, 1455
BstSLI GKGCMC 2 cut(s) 124, 415
BstV1I GCAGC 2 cut(s) 600, 1593
BstV2I GAAGAC 1 cut(s) 388
BstX2I RGATCY 1 cut(s) 847
BstYI RGATCY 1 cut(s) 847
Bsu36I CCTNAGG 2 cut(s) 720, 1717
BsuI GTATCC 1 cut(s) 168
BsuRI GGCC 2 cut(s) 640, 880
BtgI CCRYGG 1 cut(s) 311
BtsCI GGATG 2 cut(s) 322, 1314
BtsI GCAGTG 1 cut(s) 1120
BtsIMutI CAGTG 5 cut(s) 413, 1081, 1120, 1193, 1452
Cac8I GCNNGC 1 cut(s) 327
CaiI CAGNNNCTG 1 cut(s) 1606
CciI TCATGA 1 cut(s) 859
Cfr10I RCCGGY 1 cut(s) 50
Cfr13I GGNCC 2 cut(s) 638, 1406
Csp6I GTAC 1 cut(s) 1180
CviQI GTAC 1 cut(s) 1180
DdeI CTNAG 6 cut(s) 720, 1188, 1252, 1419, 1562, 1717
DpnI GATC 8 cut(s) 717, 849, 866, 1044, 1137, 1200, 1368, 1424
DpnII GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
Eam1104I CTCTTC 3 cut(s) 603, 813, 1031
EarI CTCTTC 3 cut(s) 603, 813, 1031
Eco130I CCWWGG 2 cut(s) 311, 843
Eco31I GGTCTC 1 cut(s) 594
Eco47I GGWCC 1 cut(s) 1406
Eco57I CTGAAG 4 cut(s) 382, 638, 953, 1284
Eco81I CCTNAGG 2 cut(s) 720, 1717
Eco91I GGTNACC 1 cut(s) 1721
EcoO109I RGGNCCY 2 cut(s) 638, 1406
EcoO65I GGTNACC 1 cut(s) 1721
EcoRI GAATTC 1 cut(s) 1592
EcoT14I CCWWGG 2 cut(s) 311, 843
ErhI CCWWGG 2 cut(s) 311, 843
FaqI GGGAC 1 cut(s) 1419
FauNDI CATATG 1 cut(s) 168
Fnu4HI GCNGC 2 cut(s) 614, 1607
FokI GGATG 2 cut(s) 329, 1301
Fsp4HI GCNGC 2 cut(s) 614, 1607
FspBI CTAG 5 cut(s) 30, 701, 1589, 1652, 1661
GluI GCNGC 2 cut(s) 614, 1607
GsuI CTGGAG 2 cut(s) 1311, 1356
HaeIII GGCC 2 cut(s) 640, 880
HapII CCGG 2 cut(s) 51, 144
HincII GTYRAC 2 cut(s) 912, 1308
HindII GTYRAC 2 cut(s) 912, 1308
HindIII AAGCTT 1 cut(s) 1034
HinfI GANTC 7 cut(s) 418, 432, 454, 1145, 1190, 1259, 1341
HpaI GTTAAC 1 cut(s) 912
HpaII CCGG 2 cut(s) 51, 144
HphI GGTGA 2 cut(s) 1140, 1715
Hpy166II GTNNAC 7 cut(s) 122, 548, 815, 912, 1308, 1505, 1571
Hpy188I TCNGA 7 cut(s) 459, 933, 1104, 1264, 1422, 1516, 1744
Hpy8I GTNNAC 7 cut(s) 122, 548, 815, 912, 1308, 1505, 1571
HpyAV CCTTC 5 cut(s) 200, 928, 1161, 1331, 1543
HpyCH4III ACNGT 5 cut(s) 668, 1085, 1456, 1531, 1637
HpyCH4V TGCA 8 cut(s) 122, 254, 538, 583, 679, 1125, 1391, 1483
HpyF10VI GCNNNNNNNGC 2 cut(s) 535, 619
HpyF3I CTNAG 6 cut(s) 720, 1188, 1252, 1419, 1562, 1717
KflI GGGWCCC 1 cut(s) 1406
KspAI GTTAAC 1 cut(s) 912
Kzo9I GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
LguI GCTCTTC 1 cut(s) 603
LmnI GCTCC 5 cut(s) 275, 380, 946, 1226, 1503
Lsp1109I GCAGC 2 cut(s) 600, 1593
LweI GCATC 4 cut(s) 1238, 1369, 1470, 1593
MaeI CTAG 5 cut(s) 30, 701, 1589, 1652, 1661
MaeIII GTNAC 3 cut(s) 1191, 1267, 1721
MalI GATC 8 cut(s) 717, 849, 866, 1044, 1137, 1200, 1368, 1424
MboI GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
MflI RGATCY 1 cut(s) 847
MhlI GDGCHC 2 cut(s) 124, 415
MlyI GAGTC 5 cut(s) 412, 426, 463, 1199, 1350
MmeI TCCRAC 4 cut(s) 98, 409, 1044, 1605
MseI TTAA 7 cut(s) 335, 504, 852, 911, 1091, 1110, 1686
MslI CAYNNNNRTG 4 cut(s) 198, 214, 684, 1601
MspA1I CMGCKG 1 cut(s) 1510
MspCI CTTAAG 1 cut(s) 851
MspI CCGG 2 cut(s) 51, 144
Mva1269I GAATGC 1 cut(s) 1709
MwoI GCNNNNNNNGC 2 cut(s) 535, 619
NcoI CCATGG 1 cut(s) 311
NdeI CATATG 1 cut(s) 168
NdeII GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
NlaIV GGNNCC 5 cut(s) 1076, 1331, 1407, 1408, 1499
NmeAIII GCCGAG 1 cut(s) 67
NmuCI GTSAC 3 cut(s) 1191, 1267, 1721
NspI RCATGY 2 cut(s) 950, 1391
NspV TTCGAA 1 cut(s) 59
OliI CACNNNNGTG 1 cut(s) 214
PagI TCATGA 1 cut(s) 859
PciI ACATGT 1 cut(s) 946
PciSI GCTCTTC 1 cut(s) 603
PctI GAATGC 1 cut(s) 1709
PfeI GAWTC 2 cut(s) 1145, 1259
PflFI GACNNNGTC 1 cut(s) 132
PflMI CCANNNNNTGG 2 cut(s) 317, 784
PkrI GCNGC 2 cut(s) 615, 1608
PleI GAGTC 5 cut(s) 412, 426, 462, 1198, 1349
PpsI GAGTC 5 cut(s) 412, 426, 462, 1198, 1349
PpuMI RGGWCCY 1 cut(s) 1406
PscI ACATGT 1 cut(s) 946
PshBI ATTAAT 1 cut(s) 1091
Psp5II RGGWCCY 1 cut(s) 1406
PspEI GGTNACC 1 cut(s) 1721
PspN4I GGNNCC 5 cut(s) 1076, 1331, 1407, 1408, 1499
PspPI GGNCC 2 cut(s) 638, 1406
PspPPI RGGWCCY 1 cut(s) 1406
PstNI CAGNNNCTG 1 cut(s) 1606
PsuI RGATCY 1 cut(s) 847
PsyI GACNNNGTC 1 cut(s) 132
PvuII CAGCTG 1 cut(s) 1510
RsaI GTAC 1 cut(s) 1181
RsaNI GTAC 1 cut(s) 1180
RseI CAYNNNNRTG 4 cut(s) 198, 214, 684, 1601
SapI GCTCTTC 1 cut(s) 603
SaqAI TTAA 7 cut(s) 335, 504, 852, 911, 1091, 1110, 1686
SatI GCNGC 2 cut(s) 614, 1607
Sau3AI GATC 8 cut(s) 715, 847, 864, 1042, 1135, 1198, 1366, 1422
Sau96I GGNCC 2 cut(s) 638, 1406
SchI GAGTC 5 cut(s) 412, 426, 463, 1199, 1350
SduI GDGCHC 2 cut(s) 124, 415
SfaNI GCATC 4 cut(s) 1238, 1369, 1470, 1593
SfcI CTRYAG 2 cut(s) 291, 1455
SfuI TTCGAA 1 cut(s) 59
SinI GGWCC 1 cut(s) 1406
SmiMI CAYNNNNRTG 4 cut(s) 198, 214, 684, 1601
SmlI CTYRAG 1 cut(s) 851
SmoI CTYRAG 1 cut(s) 851
SsiI CCGC 1 cut(s) 172
SspI AATATT 1 cut(s) 955
SspMI CTAG 5 cut(s) 30, 701, 1589, 1652, 1661
StyI CCWWGG 2 cut(s) 311, 843
TaaI ACNGT 5 cut(s) 668, 1085, 1456, 1531, 1637
TaqI TCGA 5 cut(s) 59, 246, 1165, 1425, 1611
TfiI GAWTC 2 cut(s) 1145, 1259
Tru1I TTAA 7 cut(s) 335, 504, 852, 911, 1091, 1110, 1686
Tru9I TTAA 7 cut(s) 335, 504, 852, 911, 1091, 1110, 1686
TscAI CASTG 5 cut(s) 420, 1088, 1127, 1200, 1459
TseFI GTSAC 3 cut(s) 1191, 1267, 1721
TseI GCWGC 2 cut(s) 613, 1606
Tsp45I GTSAC 3 cut(s) 1191, 1267, 1721
TspDTI ATGAA 6 cut(s) 60, 429, 665, 848, 914, 947
TspGWI ACGGA 2 cut(s) 895, 1490
TspRI CASTG 5 cut(s) 420, 1088, 1127, 1200, 1459
Tth111I GACNNNGTC 1 cut(s) 132
Van91I CCANNNNNTGG 2 cut(s) 317, 784
Vha464I CTTAAG 1 cut(s) 851
VneI GTGCAC 1 cut(s) 120
VpaK11BI GGWCC 1 cut(s) 1406
VspI ATTAAT 1 cut(s) 1091
XapI RAATTY 1 cut(s) 1592
XbaI TCTAGA 2 cut(s) 1651, 1660
XceI RCATGY 2 cut(s) 950, 1391
XspI CTAG 5 cut(s) 30, 701, 1589, 1652, 1661
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.