Rmu_sc0008434.1_g000001

MORC family CW-type zinc finger protein

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008434.1
Physical Location & Seq
Reverse (-)
3400 .. 9486
6087 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008434.1_g000001.1.cds

Sequence Viewer

Length: 1917 bp
atgagcaattcaaactttgtagatttatctagtgatgatgatgatgatgaaactggcgtttcgaactctgtttctccaacgccaatatctcggcaattctggaaagctggaaactacaatagtgcacagagtcagggtcataaagccggaaataaaaatcaacaaaaccatatgcgcatacaccctatgttccttcactcaaatgccacttcacataagtgggcttttggaggcatagcagagttgctcgacaatgcagttgatgagatacaaaatggagcaacttatgtttccatagacaagagttctactccatgggatgggaagccagctttgttaattcaagatgacggcggcggaatggacccagaggctataaggcgttgtatgagctttggatttacagataagatatcaaaattgaccattggacagtatggaaatggtttcaagaccagctctatgagacttggagcagatgttatggtcttcagtcgccacaggtcactgactcaaagtgttggactcctttcatatacatttttgagtcggatgggctgtgatgagatacttgtaccaacggtggattatgagtttaacatatcatctagaacatatcagcccttactgcaacatggtaaacaacaattgtcctcaaatttgaccatgatgttgcaatggtctccttattcaacagaagaagagttgctgaagcaatttgatgatatagggcctcatgggacgaaaattgtcatatacagtctttggttgaatgatgatggggatatggaactagatttcaattctgatcctaaggatatttgtatcaatggtggaaaaacaagtcagaaaagtaaaccaattttttaccatcatgtggctaaccaatttcagttctctcttcgtgtgtatgcatcgatcttgtattggcggttacctaagtacttcaaaataatattgcgtggacgagtggttgaacactacaatattgccttggatcttaagtttcatgagatcatcaagtataggccacaaacttctggaaatatgaaggtttgtgcatcgcatgaactgctttcttctgagttaactaccgatatagggtttctgaaggaagctccacatgtgaatattcatggtttctgtatctaccatcggaatcgtttaatactgccattttgtcgtgcacttaaaaccatgacaaatagaactgggcaaggtgttgtgggtgttttggaagccaaccatatccagcctactcacaataagcaagattttgagaaaactcccctcttccaaaagcttgaagatcgtttgaggcaaatgacgttggagtactggcatctacactgtgaattaattggttatccgaaacttaaaacaaatcaccgtatagaattggatcatcaggaatcaccttcttcaagaactcgaaattgcttttaccagcctgagtcactagatcatggttctcaaaatgaaaattcaggagcatctttgaatgcagtgggtttctttgaagattctgaagtcactacgttagaagtctcatcaggaggactgggaaagtcaacagacatccacaaagtcaggaaccaagaaggactcatcgtaaagaggaagcatcttgatcctccagtaagcctacaacatgcaaaaaggcacatggggccctgtggaactcagatcgaacactatactgaacagcctgatagcactgtactttcagagaagataaaactgatgcaaacaaataaaaggctccgctcacagttgtcagaaaaggagaaaacggtggaagaactcaatttgaaggttcaacaacttagaagtgaacaagagagcttacggctagaattcacacagatgctgctcgaagcaaaattgttggaggggaacagtatagattttttctag
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

638

Amino Acids

72.64

Weight (kDa)

6.55

Isoelectric Point (pI)

45.81

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 176
AccB7I CCANNNNNTGG 2 cut(s) 320, 877
AccBSI CCGCTC 1 cut(s) 1767
AciI CCGC 4 cut(s) 354, 357, 931, 1765
AclWI GGATC 4 cut(s) 803, 1005, 1410, 1625
AcsI RAATTY 3 cut(s) 658, 1483, 1856
AcuI CTGAAG 4 cut(s) 475, 731, 1130, 1548
AfaI GTAC 4 cut(s) 576, 944, 1337, 1722
AfiI CCNNNNNNNGG 3 cut(s) 320, 877, 1101
AflII CTTAAG 1 cut(s) 1001
AflIII ACRYGT 1 cut(s) 1123
AleI CACNNNNGTG 1 cut(s) 217
AluBI AGCT 7 cut(s) 107, 332, 393, 459, 1118, 1303, 1845
AluI AGCT 7 cut(s) 107, 332, 393, 459, 1118, 1303, 1845
Alw21I GWGCWC 2 cut(s) 127, 1189
Alw26I GTCTC 3 cut(s) 460, 687, 1552
Alw44I GTGCAC 2 cut(s) 123, 1185
AlwI GGATC 4 cut(s) 803, 1005, 1410, 1625
AlwNI CAGNNNCTG 1 cut(s) 1870
AoxI GGCC 3 cut(s) 731, 1028, 1670
ApaI GGGCCC 1 cut(s) 1674
ApaLI GTGCAC 2 cut(s) 123, 1185
ApeKI GCWGC 1 cut(s) 1870
ApoI RAATTY 3 cut(s) 658, 1483, 1856
AseI ATTAAT 1 cut(s) 1358
AspLEI GCGC 1 cut(s) 177
AspS9I GGNCC 4 cut(s) 364, 731, 1670, 1671
AsuHPI GGTGA 2 cut(s) 1379, 1407
AsuII TTCGAA 1 cut(s) 62
AvaII GGWCC 1 cut(s) 364
AxyI CCTNAGG 1 cut(s) 813
BaeGI GKGCMC 3 cut(s) 127, 1189, 1674
BanII GRGCYC 1 cut(s) 1674
BbsI GAAGAC 1 cut(s) 481
Bbv12I GWGCWC 2 cut(s) 127, 1189
BbvI GCAGC 1 cut(s) 1857
BccI CCATC 5 cut(s) 314, 547, 773, 879, 1161
BceAI ACGGC 2 cut(s) 367, 1865
BcoDI GTCTC 3 cut(s) 460, 687, 1552
BfaI CTAG 6 cut(s) 30, 609, 794, 1460, 1853, 1915
BfrI CTTAAG 1 cut(s) 1001
BisI GCNGC 2 cut(s) 355, 1871
BlsI GCNGC 2 cut(s) 356, 1872
BmcAI AGTACT 2 cut(s) 944, 1337
Bme18I GGWCC 1 cut(s) 364
BmgT120I GGNCC 4 cut(s) 364, 731, 1670, 1671
BmiI GGNNCC 5 cut(s) 366, 1595, 1671, 1672, 1763
BmrI ACTGGG 2 cut(s) 1221, 1571
BmsI GCATC 7 cut(s) 923, 1070, 1351, 1502, 1633, 1734, 1857
BmuI ACTGGG 2 cut(s) 1221, 1571
BpiI GAAGAC 1 cut(s) 481
BplI GAGNNNNNCTC 2 cut(s) 295, 327
BpmI CTGGAG 1 cut(s) 1620
Bpu14I TTCGAA 1 cut(s) 62
Bsa29I ATCGAT 1 cut(s) 917
BsaI GGTCTC 1 cut(s) 687
BsaJI CCNNGG 2 cut(s) 314, 993
BsaXI ACNNNNNCTCC 2 cut(s) 465, 495
Bsc4I CCNNNNNNNGG 3 cut(s) 320, 877, 1101
Bse1I ACTGG 5 cut(s) 58, 1216, 1343, 1566, 1637
Bse21I CCTNAGG 1 cut(s) 813
Bse3DI GCAATG 1 cut(s) 683
BseCI ATCGAT 1 cut(s) 917
BseDI CCNNGG 2 cut(s) 314, 993
BseGI GGATG 3 cut(s) 325, 558, 1578
BseLI CCNNNNNNNGG 3 cut(s) 320, 877, 1101
BseMI GCAATG 1 cut(s) 683
BseMII CTCAG 3 cut(s) 1074, 1443, 1697
BseNI ACTGG 5 cut(s) 58, 1216, 1343, 1566, 1637
BseSI GKGCMC 3 cut(s) 127, 1189, 1674
BseXI GCAGC 1 cut(s) 1857
BshFI GGCC 3 cut(s) 733, 1030, 1672
BshVI ATCGAT 1 cut(s) 917
BsiHKAI GWGCWC 2 cut(s) 127, 1189
BsiSI CCGG 1 cut(s) 147
BslFI GGGAC 1 cut(s) 754
BslI CCNNNNNNNGG 3 cut(s) 320, 877, 1101
BsmAI GTCTC 3 cut(s) 460, 687, 1552
BsmFI GGGAC 1 cut(s) 754
BsmI GAATGC 1 cut(s) 1507
BsnI GGCC 3 cut(s) 733, 1030, 1672
Bso31I GGTCTC 1 cut(s) 687
Bsp119I TTCGAA 1 cut(s) 62
Bsp120I GGGCCC 1 cut(s) 1670
Bsp1286I GDGCHC 3 cut(s) 127, 1189, 1674
Bsp143I GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
Bsp19I CCATGG 1 cut(s) 314
BspACI CCGC 4 cut(s) 354, 357, 931, 1765
BspANI GGCC 3 cut(s) 733, 1030, 1672
BspCNI CTCAG 3 cut(s) 1075, 1444, 1696
BspDI ATCGAT 1 cut(s) 917
BspHI TCATGA 1 cut(s) 1009
BspLI GGNNCC 5 cut(s) 366, 1595, 1671, 1672, 1763
BspPI GGATC 4 cut(s) 803, 1005, 1410, 1625
BspT104I TTCGAA 1 cut(s) 62
BspTI CTTAAG 1 cut(s) 1001
BspTNI GGTCTC 1 cut(s) 687
BsrBI CCGCTC 1 cut(s) 1767
BsrDI GCAATG 1 cut(s) 683
BsrI ACTGG 5 cut(s) 58, 1216, 1343, 1566, 1637
BssECI CCNNGG 2 cut(s) 314, 993
BssMI GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
BssT1I CCWWGG 2 cut(s) 314, 993
Bst4CI ACNGT 9 cut(s) 435, 583, 761, 1352, 1391, 1720, 1773, 1795, 1901
Bst6I CTCTTC 3 cut(s) 696, 906, 1298
BstAFI CTTAAG 1 cut(s) 1001
BstAPI GCANNNNNTGC 1 cut(s) 1072
BstBI TTCGAA 1 cut(s) 62
BstC8I GCNNGC 1 cut(s) 330
BstDEI CTNAG 6 cut(s) 813, 939, 1083, 1452, 1683, 1826
BstDSI CCRYGG 1 cut(s) 314
BstEII GGTNACC 1 cut(s) 933
BstF5I GGATG 3 cut(s) 325, 558, 1578
BstHHI GCGC 1 cut(s) 177
BstKTI GATC 9 cut(s) 811, 921, 1000, 1017, 1312, 1405, 1465, 1633, 1689
BstMAI GTCTC 3 cut(s) 460, 687, 1552
BstMBI GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
BstMWI GCNNNNNNNGC 3 cut(s) 628, 1072, 1669
BstNSI RCATGY 2 cut(s) 1127, 1655
BstPI GGTNACC 1 cut(s) 933
BstSLI GKGCMC 3 cut(s) 127, 1189, 1674
BstV1I GCAGC 1 cut(s) 1857
BstV2I GAAGAC 1 cut(s) 481
BstX2I RGATCY 1 cut(s) 997
BstYI RGATCY 1 cut(s) 997
Bsu15I ATCGAT 1 cut(s) 917
Bsu36I CCTNAGG 1 cut(s) 813
BsuRI GGCC 3 cut(s) 733, 1030, 1672
BsuTUI ATCGAT 1 cut(s) 917
BtgI CCRYGG 1 cut(s) 314
BtgZI GCGATG 1 cut(s) 1047
BtsCI GGATG 3 cut(s) 325, 558, 1578
BtsI GCAGTG 1 cut(s) 1512
BtsIMutI CAGTG 4 cut(s) 506, 1348, 1512, 1716
Cac8I GCNNGC 1 cut(s) 330
CaiI CAGNNNCTG 1 cut(s) 1870
CciI TCATGA 1 cut(s) 1009
CfoI GCGC 1 cut(s) 177
Cfr13I GGNCC 4 cut(s) 364, 731, 1670, 1671
ClaI ATCGAT 1 cut(s) 917
Csp6I GTAC 4 cut(s) 575, 943, 1336, 1721
CviQI GTAC 4 cut(s) 575, 943, 1336, 1721
DdeI CTNAG 6 cut(s) 813, 939, 1083, 1452, 1683, 1826
DpnI GATC 9 cut(s) 810, 920, 999, 1016, 1311, 1404, 1464, 1632, 1688
DpnII GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
Eam1104I CTCTTC 3 cut(s) 696, 906, 1298
EarI CTCTTC 3 cut(s) 696, 906, 1298
EciI GGCGGA 1 cut(s) 372
Eco130I CCWWGG 2 cut(s) 314, 993
Eco24I GRGCYC 1 cut(s) 1674
Eco31I GGTCTC 1 cut(s) 687
Eco32I GATATC 1 cut(s) 414
Eco47I GGWCC 1 cut(s) 364
Eco57I CTGAAG 4 cut(s) 475, 731, 1130, 1548
Eco81I CCTNAGG 1 cut(s) 813
Eco91I GGTNACC 1 cut(s) 933
EcoO109I RGGNCCY 3 cut(s) 731, 1670, 1671
EcoO65I GGTNACC 1 cut(s) 933
EcoRI GAATTC 1 cut(s) 1856
EcoRV GATATC 1 cut(s) 414
EcoT14I CCWWGG 2 cut(s) 314, 993
EcoT22I ATGCAT 1 cut(s) 916
EcoT38I GRGCYC 1 cut(s) 1674
ErhI CCWWGG 2 cut(s) 314, 993
FaqI GGGAC 1 cut(s) 754
FauNDI CATATG 1 cut(s) 171
Fnu4HI GCNGC 2 cut(s) 355, 1871
FokI GGATG 3 cut(s) 332, 565, 1565
FriOI GRGCYC 1 cut(s) 1674
Fsp4HI GCNGC 2 cut(s) 355, 1871
FspAI RTGCGCAY 1 cut(s) 176
FspBI CTAG 6 cut(s) 30, 609, 794, 1460, 1853, 1915
FspI TGCGCA 1 cut(s) 176
GlaI GCGC 1 cut(s) 176
GluI GCNGC 2 cut(s) 355, 1871
GsuI CTGGAG 1 cut(s) 1620
HaeIII GGCC 3 cut(s) 733, 1030, 1672
HapII CCGG 1 cut(s) 147
HhaI GCGC 1 cut(s) 177
Hin6I GCGC 1 cut(s) 175
HinP1I GCGC 1 cut(s) 175
HincII GTYRAC 2 cut(s) 1089, 1572
HindII GTYRAC 2 cut(s) 1089, 1572
HindIII AAGCTT 1 cut(s) 1301
HinfI GANTC 9 cut(s) 130, 511, 525, 547, 1159, 1412, 1454, 1523, 1605
HpaI GTTAAC 1 cut(s) 1089
HpaII CCGG 1 cut(s) 147
HphI GGTGA 2 cut(s) 1379, 1407
Hpy166II GTNNAC 8 cut(s) 125, 641, 857, 965, 1089, 1187, 1572, 1835
Hpy8I GTNNAC 8 cut(s) 125, 641, 857, 965, 1089, 1187, 1572, 1835
HpyAV CCTTC 6 cut(s) 203, 1045, 1105, 1428, 1595, 1807
HpyCH4III ACNGT 9 cut(s) 435, 583, 761, 1352, 1391, 1720, 1773, 1795, 1901
HpyCH4IV ACGT 2 cut(s) 1328, 1538
HpyF10VI GCNNNNNNNGC 3 cut(s) 628, 1072, 1669
HpyF3I CTNAG 6 cut(s) 813, 939, 1083, 1452, 1683, 1826
HpySE526I ACGT 2 cut(s) 1328, 1538
HspAI GCGC 1 cut(s) 175
KspAI GTTAAC 1 cut(s) 1089
Kzo9I GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
LmnI GCTCC 5 cut(s) 278, 473, 1123, 1490, 1767
Lsp1109I GCAGC 1 cut(s) 1857
LweI GCATC 7 cut(s) 923, 1070, 1351, 1502, 1633, 1734, 1857
MaeI CTAG 6 cut(s) 30, 609, 794, 1460, 1853, 1915
MaeII ACGT 2 cut(s) 1328, 1538
MaeIII GTNAC 4 cut(s) 504, 933, 1455, 1531
MalI GATC 9 cut(s) 810, 920, 999, 1016, 1311, 1404, 1464, 1632, 1688
MbiI CCGCTC 1 cut(s) 1767
MboI GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
MfeI CAATTG 1 cut(s) 647
MflI RGATCY 1 cut(s) 997
MhlI GDGCHC 3 cut(s) 127, 1189, 1674
MlyI GAGTC 6 cut(s) 139, 505, 519, 556, 1463, 1599
MmeI TCCRAC 5 cut(s) 101, 502, 530, 1311, 1869
Mph1103I ATGCAT 1 cut(s) 916
MseI TTAA 8 cut(s) 338, 597, 1002, 1088, 1166, 1191, 1358, 1377
MslI CAYNNNNRTG 3 cut(s) 201, 217, 1865
MspCI CTTAAG 1 cut(s) 1001
MspI CCGG 1 cut(s) 147
MunI CAATTG 1 cut(s) 647
Mva1269I GAATGC 1 cut(s) 1507
MwoI GCNNNNNNNGC 3 cut(s) 628, 1072, 1669
NcoI CCATGG 1 cut(s) 314
NdeI CATATG 1 cut(s) 171
NdeII GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
NlaIV GGNNCC 5 cut(s) 366, 1595, 1671, 1672, 1763
NmeAIII GCCGAG 1 cut(s) 70
NmuCI GTSAC 3 cut(s) 504, 1455, 1531
NsbI TGCGCA 1 cut(s) 176
NsiI ATGCAT 1 cut(s) 916
NspI RCATGY 2 cut(s) 1127, 1655
NspV TTCGAA 1 cut(s) 62
OliI CACNNNNGTG 1 cut(s) 217
PagI TCATGA 1 cut(s) 1009
PciI ACATGT 1 cut(s) 1123
PctI GAATGC 1 cut(s) 1507
PfeI GAWTC 3 cut(s) 1159, 1412, 1523
PflMI CCANNNNNTGG 2 cut(s) 320, 877
PkrI GCNGC 2 cut(s) 356, 1872
PleI GAGTC 6 cut(s) 138, 505, 519, 555, 1462, 1599
PpsI GAGTC 6 cut(s) 138, 505, 519, 555, 1462, 1599
PscI ACATGT 1 cut(s) 1123
PshBI ATTAAT 1 cut(s) 1358
PspEI GGTNACC 1 cut(s) 933
PspN4I GGNNCC 5 cut(s) 366, 1595, 1671, 1672, 1763
PspOMI GGGCCC 1 cut(s) 1670
PspPI GGNCC 4 cut(s) 364, 731, 1670, 1671
PstNI CAGNNNCTG 1 cut(s) 1870
PsuI RGATCY 1 cut(s) 997
RsaI GTAC 4 cut(s) 576, 944, 1337, 1722
RsaNI GTAC 4 cut(s) 575, 943, 1336, 1721
RseI CAYNNNNRTG 3 cut(s) 201, 217, 1865
SaqAI TTAA 8 cut(s) 338, 597, 1002, 1088, 1166, 1191, 1358, 1377
SatI GCNGC 2 cut(s) 355, 1871
Sau3AI GATC 9 cut(s) 808, 918, 997, 1014, 1309, 1402, 1462, 1630, 1686
Sau96I GGNCC 4 cut(s) 364, 731, 1670, 1671
ScaI AGTACT 2 cut(s) 944, 1337
SchI GAGTC 6 cut(s) 139, 505, 519, 556, 1463, 1599
SduI GDGCHC 3 cut(s) 127, 1189, 1674
SfaNI GCATC 7 cut(s) 923, 1070, 1351, 1502, 1633, 1734, 1857
SfuI TTCGAA 1 cut(s) 62
SinI GGWCC 1 cut(s) 364
SmiMI CAYNNNNRTG 3 cut(s) 201, 217, 1865
SmlI CTYRAG 1 cut(s) 1001
SmoI CTYRAG 1 cut(s) 1001
SsiI CCGC 4 cut(s) 354, 357, 931, 1765
SspI AATATT 3 cut(s) 957, 988, 1132
SspMI CTAG 6 cut(s) 30, 609, 794, 1460, 1853, 1915
StyI CCWWGG 2 cut(s) 314, 993
TaaI ACNGT 9 cut(s) 435, 583, 761, 1352, 1391, 1720, 1773, 1795, 1901
TaiI ACGT 2 cut(s) 1331, 1541
TaqI TCGA 6 cut(s) 62, 249, 917, 1432, 1689, 1875
TatI WGTACW 3 cut(s) 942, 1335, 1720
TauI GCSGC 1 cut(s) 357
TfiI GAWTC 3 cut(s) 1159, 1412, 1523
Tru1I TTAA 8 cut(s) 338, 597, 1002, 1088, 1166, 1191, 1358, 1377
Tru9I TTAA 8 cut(s) 338, 597, 1002, 1088, 1166, 1191, 1358, 1377
TscAI CASTG 4 cut(s) 513, 1355, 1512, 1723
TseFI GTSAC 3 cut(s) 504, 1455, 1531
TseI GCWGC 1 cut(s) 1870
Tsp45I GTSAC 3 cut(s) 504, 1455, 1531
TspDTI ATGAA 7 cut(s) 63, 522, 998, 1064, 1083, 1124, 1494
TspRI CASTG 4 cut(s) 513, 1355, 1512, 1723
Van91I CCANNNNNTGG 2 cut(s) 320, 877
Vha464I CTTAAG 1 cut(s) 1001
VneI GTGCAC 2 cut(s) 123, 1185
VpaK11BI GGWCC 1 cut(s) 364
VspI ATTAAT 1 cut(s) 1358
XapI RAATTY 3 cut(s) 658, 1483, 1856
XbaI TCTAGA 1 cut(s) 608
XceI RCATGY 2 cut(s) 1127, 1655
XspI CTAG 6 cut(s) 30, 609, 794, 1460, 1853, 1915
ZrmI AGTACT 2 cut(s) 944, 1337
Zsp2I ATGCAT 1 cut(s) 916
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.