Prupe.4G005900_v2.0.a1

Potassium channel

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0014681
Physical Location & Seq
Reverse (-)
329652 .. 332107
2456 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G005900.1

Sequence Viewer

Length: 1170 bp
ATGGCTAGTGATCATGATGATGTTAAACAAGGCTTACTTTCTGAAAAGGAAGAACCTGCTCAACACAATAACGAAACGAACAAGGTCCAGAGAAGAAGAAATCGCCAATATGGTAGCACTTCATGTCCATCATTTAAGAACCGCCTAGAACAAAATGAAGCGGGATCTCAATGTCCTGCAGATTGTGAGCCAATCTATGTGAAACCACAATTTAGTTTAAAGCAAGTAATGTTGTTGTTGGTGGCATACATTGGTGGAGGCACCTTCTGCTTTTTCCTGATGAGGCATCAGATAAAAGGTAAAAAAACGAATGCGATTCTGGATTCCATGTACTTGTGTGTAGTCACAATGAGCACCGTTGGATACGGGGACCTTGTACCCAATAGCATGTTGGCAAAACTAGTTGCATGCTTTTATGTGTTCACAGGCATGGCTCTTGTTGGCTTAATTCTTGGCAAGGCAGCAGATTACATTGTAGAGAAGCAGGAAATCCTTTTGGTTAGAGCCATACACTTCCGGGAAAAAATTGGGCCACCAGAGCTTCTTAAGGAGGTTGAGACCGAGAAAGTCAAGTTCAAATGTGTTACGGTTGGAATCCTTCTTTTGCTGCTTGTTATAGTAGGAACTGTCTTCTTATGTCTAGTTGAGAATCTGGAAGTTATGGATGCTTTCTATTGCGTTTGTTCCACCATTACTACTCTAGGCTATGGCGATGAGAGCTTCTCAACTGGAGGAGGTCGAATTTTCGCTGTTTTTTGGATACTCAGCAGTACCATTTGCTTAGCACAATTCTTTCTCTACCTTGCTGAACTATACACTGAAAGAAGGCAAAGATCACTTGTGAAGTGGGTTCTTACTCGGAGATTGACACTCTCCGATCTTGAGGATGCAGATCTTGATCATGATAAAGTCGTCGGGTATGAATATACTGCTCTCTTATTTGTAAATGAGATGTATCAATTCTCACGTGGTTTAACTTGTTGGATTTTCTGTATCAGTGCTGCAGAGTTTATCGTATATAAGCTAAAGGAGATGGGGAAGATCTGCCAGGAAGATATTTCACTGGTGATGGAAACCTTCAAAAACCTTGACATTGATCATTCAGGAACTTTGACAGCATCTGATCTAGCACCATCTCATTCTCAACCAACTTTTGAGTACACAGCTTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000325 GO:0003674 GO:0005215 GO:0005216 GO:0005242 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0006873 GO:0006875 GO:0008150 GO:0008324 GO:0009705 GO:0009987 GO:0010029 GO:0010119 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015276 GO:0015318 GO:0015672 GO:0016020 GO:0016021 GO:0016043 GO:0019725 GO:0022607 GO:0022803 GO:0022832 GO:0022834 GO:0022836 GO:0022838 GO:0022839 GO:0022840 GO:0022841 GO:0022842 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0030003 GO:0030004 GO:0030007 GO:0030322 GO:0031004 GO:0031090 GO:0031224 GO:0031226 GO:0032991 GO:0034220 GO:0042391 GO:0042592 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043933 GO:0044085 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0046873 GO:0048580 GO:0048878 GO:0050789 GO:0050793 GO:0050794 GO:0050801 GO:0051179 GO:0051234 GO:0051239 GO:0051259 GO:0051260 GO:0055065 GO:0055067 GO:0055075 GO:0055080 GO:0055082 GO:0055085 GO:0065003 GO:0065007 GO:0065008 GO:0071804 GO:0071805 GO:0071840 GO:0071944 GO:0090533 GO:0098533 GO:0098588 GO:0098655 GO:0098660 GO:0098662 GO:0098771 GO:0098796 GO:0098805 GO:0099094 GO:1900140 GO:1902494 GO:1902495 GO:1904949 GO:1990351 GO:2000026
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Ion_trans_2

Protein Analysis

390

Amino Acids

43.87

Weight (kDa)

5.62

Isoelectric Point (pI)

34.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0014681)

Species Orthologous Gene IDs
fragaria_vesca FvH4_3g00500 FvH4_3g00500
malus_domestica MD00G1057000.v1.1 MD10G1337300.v1.1
prunus_persica Prupe.4G005900_v2.0.a1 Prupe.4G005900_v2.0.a1 Prupe.4G005900_v2.0.a1
pyrus_communis pycom10g28670
rosa_chinensis RchiOBHm_Chr5g0000671
rosa_laevigata RLG00000030886
rosa_multiflora Rmu_sc0011992.1_g000010
rosa_rugosa Rorug04G0385500
rosa_samantha Rh5AG005600 Rh5BG007200 Rh5CG006000 Rh5DG006000
rosa_wichuraiana Rw5G000570

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 64
AccB1I GGYRCC 1 cut(s) 260
AciI CCGC 2 cut(s) 142, 161
AclWI GGATC 1 cut(s) 172
AcsI RAATTY 1 cut(s) 741
AcvI CACGTG 1 cut(s) 968
AfaI GTAC 4 cut(s) 332, 378, 772, 1160
AflII CTTAAG 1 cut(s) 545
AgsI TTSAA 2 cut(s) 577, 1081
AhlI ACTAGT 1 cut(s) 400
AjnI CCWGG 1 cut(s) 1047
AluBI AGCT 4 cut(s) 541, 720, 1024, 1166
AluI AGCT 4 cut(s) 541, 720, 1024, 1166
Alw21I GWGCWC 1 cut(s) 356
Alw26I GTCTC 1 cut(s) 551
AlwI GGATC 1 cut(s) 172
AlwNI CAGNNNCTG 1 cut(s) 1121
AoxI GGCC 1 cut(s) 530
ApeKI GCWGC 3 cut(s) 461, 607, 1001
ApoI RAATTY 1 cut(s) 741
AspS9I GGNCC 3 cut(s) 85, 370, 530
AsuC2I CCSGG 1 cut(s) 518
AsuHPI GGTGA 1 cut(s) 1078
AvaII GGWCC 2 cut(s) 85, 370
BanI GGYRCC 1 cut(s) 260
BbrPI CACGTG 1 cut(s) 968
BbsI GAAGAC 1 cut(s) 622
Bbv12I GWGCWC 1 cut(s) 356
BbvI GCAGC 3 cut(s) 473, 594, 988
BccI CCATC 4 cut(s) 136, 1027, 1063, 1141
BciT130I CCWGG 1 cut(s) 1049
BciVI GTATCC 2 cut(s) 356, 753
BclI TGATCA 3 cut(s) 10, 898, 1096
BcnI CCSGG 1 cut(s) 518
BcoDI GTCTC 1 cut(s) 551
BcuI ACTAGT 1 cut(s) 400
BfaI CTAG 6 cut(s) 6, 146, 401, 641, 701, 1127
BfmI CTRYAG 2 cut(s) 177, 1002
BfrI CTTAAG 1 cut(s) 545
BfuAI ACCTGC 1 cut(s) 64
BfuI GTATCC 2 cut(s) 356, 753
BglII AGATCT 2 cut(s) 892, 1041
BisI GCNGC 3 cut(s) 462, 608, 1002
BlpI GCTNAGC 1 cut(s) 781
BlsI GCNGC 3 cut(s) 463, 609, 1003
Bme1390I CCNGG 2 cut(s) 518, 1049
Bme18I GGWCC 2 cut(s) 85, 370
BmgT120I GGNCC 3 cut(s) 85, 370, 530
BmiI GGNNCC 2 cut(s) 262, 371
BmrFI CCNGG 2 cut(s) 518, 1049
BmsI GCATC 4 cut(s) 295, 655, 877, 1127
BpiI GAAGAC 1 cut(s) 622
BplI GAGNNNNNCTC 2 cut(s) 707, 739
BpmI CTGGAG 1 cut(s) 750
Bpu1102I GCTNAGC 1 cut(s) 781
BpuEI CTTGAG 1 cut(s) 902
BpuMI CCSGG 1 cut(s) 518
BsaAI YACGTR 1 cut(s) 968
BsaBI GATNNNNATC 2 cut(s) 891, 897
BsaI GGTCTC 1 cut(s) 551
Bse1I ACTGG 2 cut(s) 733, 1068
Bse8I GATNNNNATC 2 cut(s) 891, 897
BseBI CCWGG 1 cut(s) 1049
BseGI GGATG 2 cut(s) 670, 892
BseJI GATNNNNATC 2 cut(s) 891, 897
BseMII CTCAG 1 cut(s) 778
BseNI ACTGG 2 cut(s) 733, 1068
BseRI GAGGAG 1 cut(s) 747
BseXI GCAGC 3 cut(s) 473, 594, 988
BshFI GGCC 1 cut(s) 532
BshNI GGYRCC 1 cut(s) 260
BsiHKAI GWGCWC 1 cut(s) 356
BsiSI CCGG 1 cut(s) 517
BslFI GGGAC 1 cut(s) 383
BsmAI GTCTC 1 cut(s) 551
BsmFI GGGAC 1 cut(s) 383
BsmI GAATGC 1 cut(s) 316
BsnI GGCC 1 cut(s) 532
Bso31I GGTCTC 1 cut(s) 551
Bsp1286I GDGCHC 1 cut(s) 356
Bsp143I GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
Bsp1720I GCTNAGC 1 cut(s) 781
BspACI CCGC 2 cut(s) 142, 161
BspANI GGCC 1 cut(s) 532
BspCNI CTCAG 1 cut(s) 777
BspHI TCATGA 2 cut(s) 13, 901
BspLI GGNNCC 2 cut(s) 262, 371
BspMAI CTGCAG 2 cut(s) 181, 1006
BspMI ACCTGC 1 cut(s) 64
BspPI GGATC 1 cut(s) 172
BspT107I GGYRCC 1 cut(s) 260
BspTI CTTAAG 1 cut(s) 545
BspTNI GGTCTC 1 cut(s) 551
BsrI ACTGG 2 cut(s) 733, 1068
BssMI GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
Bst2UI CCWGG 1 cut(s) 1049
Bst4CI ACNGT 3 cut(s) 358, 589, 628
BstAFI CTTAAG 1 cut(s) 545
BstAPI GCANNNNNTGC 1 cut(s) 267
BstBAI YACGTR 1 cut(s) 968
BstC8I GCNNGC 1 cut(s) 409
BstDEI CTNAG 2 cut(s) 764, 781
BstF5I GGATG 2 cut(s) 670, 892
BstKTI GATC 9 cut(s) 13, 167, 836, 880, 895, 901, 1044, 1099, 1126
BstMAI GTCTC 1 cut(s) 551
BstMBI GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
BstMWI GCNNNNNNNGC 3 cut(s) 267, 538, 717
BstNI CCWGG 1 cut(s) 1049
BstNSI RCATGY 2 cut(s) 391, 411
BstSCI CCNGG 2 cut(s) 516, 1047
BstSFI CTRYAG 2 cut(s) 177, 1002
BstV1I GCAGC 3 cut(s) 473, 594, 988
BstV2I GAAGAC 1 cut(s) 622
BstX2I RGATCY 3 cut(s) 164, 892, 1041
BstYI RGATCY 3 cut(s) 164, 892, 1041
BsuI GTATCC 2 cut(s) 356, 753
BsuRI GGCC 1 cut(s) 532
BtgZI GCGATG 1 cut(s) 726
BtsCI GGATG 2 cut(s) 670, 892
BtsIMutI CAGTG 3 cut(s) 816, 1003, 1061
BveI ACCTGC 1 cut(s) 64
Cac8I GCNNGC 1 cut(s) 409
CaiI CAGNNNCTG 1 cut(s) 1121
CciI TCATGA 2 cut(s) 13, 901
Cfr13I GGNCC 3 cut(s) 85, 370, 530
Csp6I GTAC 4 cut(s) 331, 377, 771, 1159
CviAII CATG 7 cut(s) 14, 123, 328, 388, 408, 430, 902
CviQI GTAC 4 cut(s) 331, 377, 771, 1159
DdeI CTNAG 2 cut(s) 764, 781
DpnI GATC 9 cut(s) 12, 166, 835, 879, 894, 900, 1043, 1098, 1125
DpnII GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
DraI TTTAAA 1 cut(s) 219
Eco31I GGTCTC 1 cut(s) 551
Eco47I GGWCC 2 cut(s) 85, 370
Eco72I CACGTG 1 cut(s) 968
EcoO109I RGGNCCY 1 cut(s) 370
EcoRII CCWGG 1 cut(s) 1047
FaeI CATG 7 cut(s) 17, 126, 331, 391, 411, 433, 905
FalI AAGNNNNNCTT 2 cut(s) 21, 53
FaqI GGGAC 1 cut(s) 383
FatI CATG 7 cut(s) 13, 122, 327, 387, 407, 429, 901
FauI CCCGC 1 cut(s) 154
FbaI TGATCA 3 cut(s) 10, 898, 1096
Fnu4HI GCNGC 3 cut(s) 462, 608, 1002
FokI GGATG 2 cut(s) 677, 899
Fsp4HI GCNGC 3 cut(s) 462, 608, 1002
FspBI CTAG 6 cut(s) 6, 146, 401, 641, 701, 1127
GluI GCNGC 3 cut(s) 462, 608, 1002
GsuI CTGGAG 1 cut(s) 750
HaeIII GGCC 1 cut(s) 532
HapII CCGG 1 cut(s) 517
Hin1II CATG 7 cut(s) 17, 126, 331, 391, 411, 433, 905
HinfI GANTC 4 cut(s) 316, 323, 594, 649
HpaII CCGG 1 cut(s) 517
HphI GGTGA 1 cut(s) 1078
Hpy166II GTNNAC 2 cut(s) 423, 1161
Hpy188I TCNGA 5 cut(s) 43, 291, 861, 877, 1123
Hpy188III TCNNGA 9 cut(s) 14, 88, 277, 320, 653, 881, 896, 902, 1104
Hpy8I GTNNAC 2 cut(s) 423, 1161
Hpy99I CGWCG 1 cut(s) 917
HpyAV CCTTC 4 cut(s) 274, 608, 819, 1087
HpyCH4III ACNGT 3 cut(s) 358, 589, 628
HpyCH4IV ACGT 1 cut(s) 967
HpyCH4V TGCA 4 cut(s) 179, 407, 890, 1004
HpyF10VI GCNNNNNNNGC 3 cut(s) 267, 538, 717
HpyF3I CTNAG 2 cut(s) 764, 781
HpySE526I ACGT 1 cut(s) 967
Hsp92II CATG 7 cut(s) 17, 126, 331, 391, 411, 433, 905
Ksp22I TGATCA 3 cut(s) 10, 898, 1096
Kzo9I GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
Lsp1109I GCAGC 3 cut(s) 473, 594, 988
LweI GCATC 4 cut(s) 295, 655, 877, 1127
MaeI CTAG 6 cut(s) 6, 146, 401, 641, 701, 1127
MaeII ACGT 1 cut(s) 967
MaeIII GTNAC 2 cut(s) 343, 583
MalI GATC 9 cut(s) 12, 166, 835, 879, 894, 900, 1043, 1098, 1125
MboI GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
MboII GAAGA 6 cut(s) 62, 105, 108, 622, 1051, 1064
MflI RGATCY 3 cut(s) 164, 892, 1041
MhlI GDGCHC 1 cut(s) 356
MluCI AATT 6 cut(s) 209, 447, 525, 741, 788, 959
MmeI TCCRAC 3 cut(s) 340, 571, 962
MnlI CCTC 6 cut(s) 251, 276, 544, 725, 728, 877
MseI TTAA 7 cut(s) 24, 135, 218, 446, 546, 974, 1168
MslI CAYNNNNRTG 2 cut(s) 18, 428
MspCI CTTAAG 1 cut(s) 545
MspI CCGG 1 cut(s) 517
MspR9I CCNGG 2 cut(s) 518, 1049
Mva1269I GAATGC 1 cut(s) 316
MvaI CCWGG 1 cut(s) 1049
MwoI GCNNNNNNNGC 3 cut(s) 267, 538, 717
NciI CCSGG 1 cut(s) 518
NdeII GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
NlaIII CATG 7 cut(s) 17, 126, 331, 391, 411, 433, 905
NlaIV GGNNCC 2 cut(s) 262, 371
NmuCI GTSAC 1 cut(s) 343
NspI RCATGY 2 cut(s) 391, 411
PaeI GCATGC 1 cut(s) 411
PagI TCATGA 2 cut(s) 13, 901
PctI GAATGC 1 cut(s) 316
PfeI GAWTC 4 cut(s) 316, 323, 594, 649
PfoI TCCNGGA 1 cut(s) 516
PkrI GCNGC 3 cut(s) 463, 609, 1003
PmaCI CACGTG 1 cut(s) 968
PmlI CACGTG 1 cut(s) 968
Ppu21I YACGTR 1 cut(s) 968
PpuMI RGGWCCY 1 cut(s) 370
Psp5II RGGWCCY 1 cut(s) 370
Psp6I CCWGG 1 cut(s) 1047
PspCI CACGTG 1 cut(s) 968
PspGI CCWGG 1 cut(s) 1047
PspN4I GGNNCC 2 cut(s) 262, 371
PspPI GGNCC 3 cut(s) 85, 370, 530
PspPPI RGGWCCY 1 cut(s) 370
PstI CTGCAG 2 cut(s) 181, 1006
PstNI CAGNNNCTG 1 cut(s) 1121
PsuI RGATCY 3 cut(s) 164, 892, 1041
RsaI GTAC 4 cut(s) 332, 378, 772, 1160
RsaNI GTAC 4 cut(s) 331, 377, 771, 1159
RseI CAYNNNNRTG 2 cut(s) 18, 428
SaqAI TTAA 7 cut(s) 24, 135, 218, 446, 546, 974, 1168
SatI GCNGC 3 cut(s) 462, 608, 1002
Sau3AI GATC 9 cut(s) 10, 164, 833, 877, 892, 898, 1041, 1096, 1123
Sau96I GGNCC 3 cut(s) 85, 370, 530
ScrFI CCNGG 2 cut(s) 518, 1049
SduI GDGCHC 1 cut(s) 356
SfaNI GCATC 4 cut(s) 295, 655, 877, 1127
SfcI CTRYAG 2 cut(s) 177, 1002
SinI GGWCC 2 cut(s) 85, 370
SmiMI CAYNNNNRTG 2 cut(s) 18, 428
SmlI CTYRAG 2 cut(s) 545, 881
SmoI CTYRAG 2 cut(s) 545, 881
SpeI ACTAGT 1 cut(s) 400
SphI GCATGC 1 cut(s) 411
Sse9I AATT 6 cut(s) 209, 447, 525, 741, 788, 959
SsiI CCGC 2 cut(s) 142, 161
SspMI CTAG 6 cut(s) 6, 146, 401, 641, 701, 1127
StyD4I CCNGG 2 cut(s) 516, 1047
TaaI ACNGT 3 cut(s) 358, 589, 628
TaiI ACGT 1 cut(s) 970
TaqI TCGA 1 cut(s) 739
TaqII GACCGA 1 cut(s) 575
TasI AATT 6 cut(s) 209, 447, 525, 741, 788, 959
TatI WGTACW 2 cut(s) 330, 1158
TfiI GAWTC 4 cut(s) 316, 323, 594, 649
Tru1I TTAA 7 cut(s) 24, 135, 218, 446, 546, 974, 1168
Tru9I TTAA 7 cut(s) 24, 135, 218, 446, 546, 974, 1168
TscAI CASTG 3 cut(s) 823, 1003, 1068
TseFI GTSAC 1 cut(s) 343
TseI GCWGC 3 cut(s) 461, 607, 1001
Tsp45I GTSAC 1 cut(s) 343
TspDTI ATGAA 3 cut(s) 111, 171, 936
TspRI CASTG 3 cut(s) 823, 1003, 1068
Vha464I CTTAAG 1 cut(s) 545
VpaK11BI GGWCC 2 cut(s) 85, 370
XapI RAATTY 1 cut(s) 741
XceI RCATGY 2 cut(s) 391, 411
XcmI CCANNNNNNNNNTGG 1 cut(s) 388
XspI CTAG 6 cut(s) 6, 146, 401, 641, 701, 1127
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.