Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000004

Orthogroup ID

OG0001048

Physical Location & Seq

Genomic Coordinates Forward (+)

55554474 .. 55557714

Gene Structure 3241 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug04G0385500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1413 bp

ATGGCAAATCAGACAGAGGATCCGCCGATCCCAAGCGCAGAGATTGTGGGCACTGCTTTTGTGCGTCAGTATTACACAATACTTAATCAAAGCCCTCATGAGGTTTACAAGTTTTATTCCAAAGACAGTCTCTTGAGCCGACCTGAGGCAGATGGTACAATGACAACAGTTGAAACTGTACAAGCCATCAATGAGAAGATATTATCGTTGGACTGTCCGTCTATACATATTTTGACGGTAGATTCTCAGTTTTCATTGGCCAATGGAGTAATTGTTTTAGTGACCGGGAATATAGTTGGAAACGACAAAGTGAAAAGAAGATTTACTCAAACTTTCTTTTTAGCCACGCAAGAGACAGGAGGATATTTTGTCTTAAATGACATGTTTAAGTTTGTCATCGATGATAATACAAATAAGTACGCTCCTGGTTATGTTGCAGAAGAGACTCCAAATGTTCCTTTGAACCCAAATGATGAGTTATGTGCTGTTGCTGACGAGCCAATTCCCACTCAAACAACTTATGTGGAGGTTGATAGTGCCAATGGAAATGAAGTTAATCATGTGTTGAAGAACTGTGAGGAGTCTGAGAAAAATGTTATTTCTGAAAAAAGTGTTGTTGCTGAGAAGAGTGTTGTTGTTGAAAAAGGTGTTGATGCAAGACAGAGTGTTGCTAACCATGTCAATGAAGCAGCTTCTTCAGCTTCTTCCAACATCCAGAAGGATGCTCCGAAAAAGACTTTTGCATCAGTTGTGAATGCCTTGAGTGTGAATAAAGCTCCCTTCAATGTGAGGGCACCCCCACCTAAACCTGTTGAGCGGCCACGTGCAACGGCCCCTGCACCTGTAGCACCTGAAGCTTTAACCCGAAACAACAGTACTGCAAGTTCTGTGGAAAAGAACAATGTTCCTGCAGTTAAAGCTCATGCCATTTTTGTTGCAAATTTGCCTATGAGTGCAACTGTCGAAGAATTGGATAAGCTTTTCAAGCAGTTTGGATCCATCAAGCGCGATGGGATTCAAGTTAGAAGCAATAAGATACAGGGAACATGCTTTGGATTTGTGGAATTTGAATCTGCTAGTTCCATGCAGAGTGCAATAAAGGCATCTCCTATTGAATTTGGCTCTCGTTTGTTATCCATCGAAGAAAGACGAGCAAACAATGATAGAGGAAAGTTTCCTTCTGGAAAAGGTGGGTATCGAAATGACAACTTTAGGGGCCGCGAGAACTATAGTGGAGGCGGAGGCCGTGGGAACTATGGTGGAGGTCGTGGTTATGGAAGAAACGATTTACGTGGTGAATCAAGTCAATTTTCAGGCCAAGCTAGGGGCAATGGCGGGCGCTATGGAGAAAGGCCTTATCAGAATGGAGGAAAGGTTGTTCGTCAAACAGCAAAGCCGTTGGCCGCAGCATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003729 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006417 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009532 GO:0009536 GO:0009570 GO:0009889 GO:0009891 GO:0009893 GO:0009987 GO:0010467 GO:0010468 GO:0010556 GO:0010557 GO:0010604 GO:0010608 GO:0010628 GO:0016070 GO:0016787 GO:0016788 GO:0019222 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031425 GO:0032268 GO:0032270 GO:0034248 GO:0034250 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0045727 GO:0046483 GO:0048518 GO:0048522 GO:0050789 GO:0050794 GO:0051171 GO:0051173 GO:0051246 GO:0051247 GO:0060255 GO:0065007 GO:0071704 GO:0080090 GO:0090304 GO:0090305 GO:0097159 GO:1901360 GO:1901363 GO:2000112

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2 PPR_3

Protein Analysis

470

Amino Acids

50.87

Weight (kDa)

8.16

Isoelectric Point (pI)

42.2

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NTF2	PF02136	16 - 131	9.4e-30	Nuclear transport factor 2 (NTF2) domain
RRM_1	PF00076	310 - 376	1.7e-12	RNA recognition motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001048)

Species	Orthologous Gene IDs
rosa_chinensis	RchiOBHm_Chr1g0330341 RchiOBHm_Chr1g0336151 RchiOBHm_Chr1g0355571 RchiOBHm_Chr1g0379921 RchiOBHm_Chr2g0118311 RchiOBHm_Chr2g0135891 RchiOBHm_Chr2g0155351 RchiOBHm_Chr2g0155371 RchiOBHm_Chr4g0394861 RchiOBHm_Chr4g0407121 RchiOBHm_Chr5g0035481 RchiOBHm_Chr5g0035671 RchiOBHm_Chr5g0035831 RchiOBHm_Chr5g0063711 RchiOBHm_Chr6g0312321 RchiOBHm_Chr7g0200221
rosa_laevigata	RLG00000009003 RLG00000018408 RLG00000023915 RLG00000026351
rosa_multiflora	Rmu_co8334137.1_g000001 Rmu_sc0000084.1_g000018 Rmu_sc0002935.1_g000015 Rmu_sc0004184.1_g000022 Rmu_sc0004305.1_g000014 Rmu_sc0004950.1_g000010 Rmu_sc0005795.1_g000005 Rmu_sc0011378.1_g000001
rosa_roxburghii	Rroxscaffold_1G00009990 Rroxscaffold_1G00028430 Rroxscaffold_1G00037070 Rroxscaffold_2G00090780 Rroxscaffold_2G00125020 Rroxscaffold_2G00125690 Rroxscaffold_3G00252090 Rroxscaffold_6G00393900
rosa_rugosa	Rorug03G0293900 Rorug03G0334700 Rorug03G0343100 Rorug04G0385500 Rorug05G0136700 Rorug06G0008200
rosa_samantha	Rh1BG396000 Rh1CG409000 Rh2CG325300 Rh4AG142900 Rh4AG276000 Rh5CG272500 Rh5CG276700 Rh6BG126600 Rh6DG111600
rosa_wichuraiana	Rw2G011210 Rw3G012340 Rw3G019470 Rw4G034300 Rw5G010750 Rw5G022370 Rw5G022390 Rw5G022420 Rw6G007260 Rw7G036970

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	793
AccBSI	CCGCTC	1 cut(s)	817
AccII	CGCG	2 cut(s)	1008, 1221
AciI	CCGC	6 cut(s)	23, 817, 1219, 1239, 1335, 1404
AclWI	GGATC	5 cut(s)	14, 22, 27, 990, 1003
AcoI	YGGCCR	3 cut(s)	258, 818, 1401
AcsI	RAATTY	3 cut(s)	940, 1064, 1115
AcuI	CTGAAG	2 cut(s)	681, 873
AcvI	CACGTG	1 cut(s)	824
AfaI	GTAC	4 cut(s)	157, 180, 419, 877
AfiI	CCNNNNNNNGG	3 cut(s)	100, 145, 1324
AflIII	ACRYGT	1 cut(s)	381
AgsI	TTSAA	9 cut(s)	173, 463, 568, 641, 784, 985, 1019, 1070, 1115
AhdI	GACNNNNNGTC	1 cut(s)	217
AjnI	CCWGG	1 cut(s)	424
AloI	GAACNNNNNNTCC	2 cut(s)	1362, 1394
AluBI	AGCT	7 cut(s)	692, 701, 776, 857, 920, 979, 1322
AluI	AGCT	7 cut(s)	692, 701, 776, 857, 920, 979, 1322
Alw26I	GTCTC	3 cut(s)	134, 347, 437
AlwI	GGATC	5 cut(s)	14, 22, 27, 990, 1003
AoxI	GGCC	8 cut(s)	258, 818, 831, 1216, 1243, 1315, 1352, 1401
ApeKI	GCWGC	2 cut(s)	689, 1406
ApoI	RAATTY	3 cut(s)	940, 1064, 1115
AspLEI	GCGC	3 cut(s)	38, 1008, 1341
AspS9I	GGNCC	2 cut(s)	832, 1216
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	1 cut(s)	1307
AxyI	CCTNAGG	1 cut(s)	144
BaeGI	GKGCMC	2 cut(s)	53, 796
BalI	TGGCCA	1 cut(s)	260
BamHI	GGATCC	2 cut(s)	19, 995
BanI	GGYRCC	1 cut(s)	793
BbrPI	CACGTG	1 cut(s)	824
BbvI	GCAGC	1 cut(s)	701
BccI	CCATC	5 cut(s)	146, 194, 1004, 1007, 1145
BceAI	ACGGC	3 cut(s)	846, 1230, 1381
BciT130I	CCWGG	1 cut(s)	426
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	3 cut(s)	134, 347, 437
BfaI	CTAG	2 cut(s)	1077, 1323
BfmI	CTRYAG	3 cut(s)	843, 909, 1228
BfoI	RGCGCY	1 cut(s)	1342
BisI	GCNGC	5 cut(s)	690, 818, 1219, 1404, 1407
BlsI	GCNGC	5 cut(s)	691, 819, 1220, 1405, 1408
BmcAI	AGTACT	1 cut(s)	877
Bme1390I	CCNGG	2 cut(s)	286, 426
BmeRI	GACNNNNNGTC	1 cut(s)	217
BmgT120I	GGNCC	2 cut(s)	832, 1216
BmiI	GGNNCC	5 cut(s)	21, 795, 834, 997, 1217
BmrFI	CCNGG	2 cut(s)	286, 426
BmsI	GCATC	4 cut(s)	643, 712, 752, 1112
BpuEI	CTTGAG	2 cut(s)	154, 781
BpuMI	CCSGG	1 cut(s)	286
Bsa29I	ATCGAT	1 cut(s)	399
BsaAI	YACGTR	2 cut(s)	824, 1292
BsaJI	CCNNGG	1 cut(s)	1246
BsaXI	ACNNNNNCTCC	4 cut(s)	258, 288, 1359, 1389
Bsc4I	CCNNNNNNNGG	3 cut(s)	100, 145, 1324
Bse21I	CCTNAGG	1 cut(s)	144
Bse3DI	GCAATG	1 cut(s)	1336
BseBI	CCWGG	1 cut(s)	426
BseCI	ATCGAT	1 cut(s)	399
BseDI	CCNNGG	1 cut(s)	1246
BseGI	GGATG	2 cut(s)	711, 727
BseLI	CCNNNNNNNGG	3 cut(s)	100, 145, 1324
BseMI	GCAATG	1 cut(s)	1336
BseMII	CTCAG	4 cut(s)	135, 260, 576, 612
BseRI	GAGGAG	1 cut(s)	593
BseSI	GKGCMC	2 cut(s)	53, 796
BseXI	GCAGC	1 cut(s)	701
BsgI	GTGCAG	1 cut(s)	822
Bsh1236I	CGCG	2 cut(s)	1008, 1221
BshFI	GGCC	8 cut(s)	260, 820, 833, 1218, 1245, 1317, 1354, 1403
BshNI	GGYRCC	1 cut(s)	793
BshVI	ATCGAT	1 cut(s)	399
BsiSI	CCGG	1 cut(s)	285
BslI	CCNNNNNNNGG	3 cut(s)	100, 145, 1324
BsmAI	GTCTC	3 cut(s)	134, 347, 437
BsmI	GAATGC	1 cut(s)	760
BsnI	GGCC	8 cut(s)	260, 820, 833, 1218, 1245, 1317, 1354, 1403
Bsp1286I	GDGCHC	2 cut(s)	53, 796
Bsp1407I	TGTACA	1 cut(s)	178
Bsp143I	GATC	3 cut(s)	19, 27, 995
BspACI	CCGC	6 cut(s)	23, 817, 1219, 1239, 1335, 1404
BspANI	GGCC	8 cut(s)	260, 820, 833, 1218, 1245, 1317, 1354, 1403
BspCNI	CTCAG	4 cut(s)	136, 259, 577, 613
BspDI	ATCGAT	1 cut(s)	399
BspFNI	CGCG	2 cut(s)	1008, 1221
BspHI	TCATGA	1 cut(s)	97
BspLI	GGNNCC	5 cut(s)	21, 795, 834, 997, 1217
BspMAI	CTGCAG	1 cut(s)	913
BspPI	GGATC	5 cut(s)	14, 22, 27, 990, 1003
BspT107I	GGYRCC	1 cut(s)	793
BsrBI	CCGCTC	1 cut(s)	817
BsrDI	GCAATG	1 cut(s)	1336
BsrGI	TGTACA	1 cut(s)	178
BssECI	CCNNGG	1 cut(s)	1246
BssMI	GATC	3 cut(s)	19, 27, 995
Bst2UI	CCWGG	1 cut(s)	426
Bst4CI	ACNGT	8 cut(s)	128, 169, 178, 215, 238, 575, 875, 961
Bst6I	CTCTTC	2 cut(s)	435, 620
BstAUI	TGTACA	1 cut(s)	178
BstBAI	YACGTR	2 cut(s)	824, 1292
BstC8I	GCNNGC	1 cut(s)	1337
BstDEI	CTNAG	4 cut(s)	144, 246, 585, 621
BstDSI	CCRYGG	1 cut(s)	1246
BstF5I	GGATG	2 cut(s)	711, 727
BstFNI	CGCG	2 cut(s)	1008, 1221
BstH2I	RGCGCY	1 cut(s)	1342
BstHHI	GCGC	3 cut(s)	38, 1008, 1341
BstKTI	GATC	3 cut(s)	22, 30, 998
BstMAI	GTCTC	3 cut(s)	134, 347, 437
BstMBI	GATC	3 cut(s)	19, 27, 995
BstMWI	GCNNNNNNNGC	6 cut(s)	698, 845, 854, 917, 985, 1100
BstNI	CCWGG	1 cut(s)	426
BstNSI	RCATGY	2 cut(s)	385, 1050
BstSCI	CCNGG	2 cut(s)	284, 424
BstSFI	CTRYAG	3 cut(s)	843, 909, 1228
BstSLI	GKGCMC	2 cut(s)	53, 796
BstUI	CGCG	2 cut(s)	1008, 1221
BstV1I	GCAGC	1 cut(s)	701
BstX2I	RGATCY	2 cut(s)	19, 995
BstYI	RGATCY	2 cut(s)	19, 995
Bsu15I	ATCGAT	1 cut(s)	399
Bsu36I	CCTNAGG	1 cut(s)	144
BsuRI	GGCC	8 cut(s)	260, 820, 833, 1218, 1245, 1317, 1354, 1403
BsuTUI	ATCGAT	1 cut(s)	399
BtgI	CCRYGG	1 cut(s)	1246
BtgZI	GCGATG	1 cut(s)	1023
BtsCI	GGATG	2 cut(s)	711, 727
BtsI	GCAGTG	1 cut(s)	51
BtsIMutI	CAGTG	1 cut(s)	51
Cac8I	GCNNGC	1 cut(s)	1337
CciI	TCATGA	1 cut(s)	97
CfoI	GCGC	3 cut(s)	38, 1008, 1341
Cfr13I	GGNCC	2 cut(s)	832, 1216
ClaI	ATCGAT	1 cut(s)	399
CseI	GACGC	1 cut(s)	53
Csp6I	GTAC	4 cut(s)	156, 179, 418, 876
CspCI	CAANNNNNGTGG	4 cut(s)	504, 539, 870, 905
CviAII	CATG	8 cut(s)	98, 382, 560, 677, 923, 1047, 1084, 1410
CviQI	GTAC	4 cut(s)	156, 179, 418, 876
DdeI	CTNAG	4 cut(s)	144, 246, 585, 621
DpnI	GATC	3 cut(s)	21, 29, 997
DpnII	GATC	3 cut(s)	19, 27, 995
DriI	GACNNNNNGTC	1 cut(s)	217
EaeI	YGGCCR	3 cut(s)	258, 818, 1401
Eam1104I	CTCTTC	2 cut(s)	435, 620
Eam1105I	GACNNNNNGTC	1 cut(s)	217
EarI	CTCTTC	2 cut(s)	435, 620
EciI	GGCGGA	2 cut(s)	12, 1254
Eco147I	AGGCCT	1 cut(s)	1354
Eco57I	CTGAAG	2 cut(s)	681, 873
Eco72I	CACGTG	1 cut(s)	824
Eco81I	CCTNAGG	1 cut(s)	144
EcoRII	CCWGG	1 cut(s)	424
FaeI	CATG	8 cut(s)	101, 385, 563, 680, 926, 1050, 1087, 1413
FatI	CATG	8 cut(s)	97, 381, 559, 676, 922, 1046, 1083, 1409
FauI	CCCGC	1 cut(s)	1328
Fnu4HI	GCNGC	5 cut(s)	690, 818, 1219, 1404, 1407
FokI	GGATG	2 cut(s)	698, 734
Fsp4HI	GCNGC	5 cut(s)	690, 818, 1219, 1404, 1407
FspBI	CTAG	2 cut(s)	1077, 1323
GlaI	GCGC	3 cut(s)	37, 1007, 1340
GluI	GCNGC	5 cut(s)	690, 818, 1219, 1404, 1407
HaeII	RGCGCY	1 cut(s)	1342
HaeIII	GGCC	8 cut(s)	260, 820, 833, 1218, 1245, 1317, 1354, 1403
HapII	CCGG	1 cut(s)	285
HgaI	GACGC	1 cut(s)	53
HhaI	GCGC	3 cut(s)	38, 1008, 1341
Hin1II	CATG	8 cut(s)	101, 385, 563, 680, 926, 1050, 1087, 1413
Hin6I	GCGC	3 cut(s)	36, 1006, 1339
HinP1I	GCGC	3 cut(s)	36, 1006, 1339
HindIII	AAGCTT	2 cut(s)	855, 977
HinfI	GANTC	6 cut(s)	242, 445, 581, 1015, 1070, 1298
HpaII	CCGG	1 cut(s)	285
HphI	GGTGA	1 cut(s)	1307
Hpy166II	GTNNAC	1 cut(s)	106
Hpy188I	TCNGA	5 cut(s)	12, 586, 604, 729, 1362
Hpy188III	TCNNGA	4 cut(s)	98, 133, 715, 1182
Hpy8I	GTNNAC	1 cut(s)	106
HpyAV	CCTTC	3 cut(s)	712, 790, 1188
HpyCH4III	ACNGT	8 cut(s)	128, 169, 178, 215, 238, 575, 875, 961
HpyCH4IV	ACGT	2 cut(s)	823, 1291
HpyF10VI	GCNNNNNNNGC	6 cut(s)	698, 845, 854, 917, 985, 1100
HpyF3I	CTNAG	4 cut(s)	144, 246, 585, 621
HpySE526I	ACGT	2 cut(s)	823, 1291
Hsp92II	CATG	8 cut(s)	101, 385, 563, 680, 926, 1050, 1087, 1413
HspAI	GCGC	3 cut(s)	36, 1006, 1339
Kzo9I	GATC	3 cut(s)	19, 27, 995
LmnI	GCTCC	3 cut(s)	427, 730, 781
Lsp1109I	GCAGC	1 cut(s)	701
LweI	GCATC	4 cut(s)	643, 712, 752, 1112
MaeI	CTAG	2 cut(s)	1077, 1323
MaeII	ACGT	2 cut(s)	823, 1291
MaeIII	GTNAC	1 cut(s)	280
MalI	GATC	3 cut(s)	21, 29, 997
MbiI	CCGCTC	1 cut(s)	817
MboI	GATC	3 cut(s)	19, 27, 995
MflI	RGATCY	2 cut(s)	19, 995
MhlI	GDGCHC	2 cut(s)	53, 796
MlsI	TGGCCA	1 cut(s)	260
MluCI	AATT	7 cut(s)	270, 501, 940, 968, 1064, 1115, 1307
MluNI	TGGCCA	1 cut(s)	260
MlyI	GAGTC	2 cut(s)	439, 590
MmeI	TCCRAC	3 cut(s)	189, 277, 732
Mox20I	TGGCCA	1 cut(s)	260
MscI	TGGCCA	1 cut(s)	260
MseI	TTAA	6 cut(s)	84, 374, 387, 555, 860, 915
MslI	CAYNNNNRTG	1 cut(s)	681
Msp20I	TGGCCA	1 cut(s)	260
MspI	CCGG	1 cut(s)	285
MspR9I	CCNGG	2 cut(s)	286, 426
Mva1269I	GAATGC	1 cut(s)	760
MvaI	CCWGG	1 cut(s)	426
MvnI	CGCG	2 cut(s)	1008, 1221
MwoI	GCNNNNNNNGC	6 cut(s)	698, 845, 854, 917, 985, 1100
NciI	CCSGG	1 cut(s)	286
NdeII	GATC	3 cut(s)	19, 27, 995
NlaIII	CATG	8 cut(s)	101, 385, 563, 680, 926, 1050, 1087, 1413
NlaIV	GGNNCC	5 cut(s)	21, 795, 834, 997, 1217
NmuCI	GTSAC	1 cut(s)	280
NspI	RCATGY	2 cut(s)	385, 1050
PagI	TCATGA	1 cut(s)	97
PceI	AGGCCT	1 cut(s)	1354
PciI	ACATGT	1 cut(s)	381
PctI	GAATGC	1 cut(s)	760
PfeI	GAWTC	4 cut(s)	242, 1015, 1070, 1298
PkrI	GCNGC	5 cut(s)	691, 819, 1220, 1405, 1408
PleI	GAGTC	2 cut(s)	439, 589
PmaCI	CACGTG	1 cut(s)	824
PmlI	CACGTG	1 cut(s)	824
PpsI	GAGTC	2 cut(s)	439, 589
Ppu21I	YACGTR	2 cut(s)	824, 1292
PscI	ACATGT	1 cut(s)	381
Psp6I	CCWGG	1 cut(s)	424
PspCI	CACGTG	1 cut(s)	824
PspGI	CCWGG	1 cut(s)	424
PspN4I	GGNNCC	5 cut(s)	21, 795, 834, 997, 1217
PspPI	GGNCC	2 cut(s)	832, 1216
PsrI	GAACNNNNNNTAC	2 cut(s)	868, 900
PstI	CTGCAG	1 cut(s)	913
PsuI	RGATCY	2 cut(s)	19, 995
RsaI	GTAC	4 cut(s)	157, 180, 419, 877
RsaNI	GTAC	4 cut(s)	156, 179, 418, 876
RseI	CAYNNNNRTG	1 cut(s)	681
SaqAI	TTAA	6 cut(s)	84, 374, 387, 555, 860, 915
SatI	GCNGC	5 cut(s)	690, 818, 1219, 1404, 1407
Sau3AI	GATC	3 cut(s)	19, 27, 995
Sau96I	GGNCC	2 cut(s)	832, 1216
ScaI	AGTACT	1 cut(s)	877
SchI	GAGTC	2 cut(s)	439, 590
ScrFI	CCNGG	2 cut(s)	286, 426
SduI	GDGCHC	2 cut(s)	53, 796
SfaNI	GCATC	4 cut(s)	643, 712, 752, 1112
SfcI	CTRYAG	3 cut(s)	843, 909, 1228
SmiMI	CAYNNNNRTG	1 cut(s)	681
SmlI	CTYRAG	2 cut(s)	133, 760
SmoI	CTYRAG	2 cut(s)	133, 760
Sse9I	AATT	7 cut(s)	270, 501, 940, 968, 1064, 1115, 1307
SseBI	AGGCCT	1 cut(s)	1354
SsiI	CCGC	6 cut(s)	23, 817, 1219, 1239, 1335, 1404
SspMI	CTAG	2 cut(s)	1077, 1323
StuI	AGGCCT	1 cut(s)	1354
StyD4I	CCNGG	2 cut(s)	284, 424
TaaI	ACNGT	8 cut(s)	128, 169, 178, 215, 238, 575, 875, 961
TaiI	ACGT	2 cut(s)	826, 1294
TaqI	TCGA	4 cut(s)	399, 963, 1140, 1198
TasI	AATT	7 cut(s)	270, 501, 940, 968, 1064, 1115, 1307
TatI	WGTACW	2 cut(s)	178, 875
TauI	GCSGC	3 cut(s)	820, 1221, 1406
TfiI	GAWTC	4 cut(s)	242, 1015, 1070, 1298
Tru1I	TTAA	6 cut(s)	84, 374, 387, 555, 860, 915
Tru9I	TTAA	6 cut(s)	84, 374, 387, 555, 860, 915
TscAI	CASTG	1 cut(s)	58
TseFI	GTSAC	1 cut(s)	280
TseI	GCWGC	2 cut(s)	689, 1406
Tsp45I	GTSAC	1 cut(s)	280
TspDTI	ATGAA	3 cut(s)	243, 564, 699
TspGWI	ACGGA	1 cut(s)	207
TspRI	CASTG	1 cut(s)	58
XapI	RAATTY	3 cut(s)	940, 1064, 1115
XceI	RCATGY	2 cut(s)	385, 1050
XspI	CTAG	2 cut(s)	1077, 1323
ZrmI	AGTACT	1 cut(s)	877

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.