RchiOBHm_Chr2g0118311

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
Physical Location & Seq
Reverse (-)
30627104 .. 30628531
1428 bp
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UTR
Exon/CDS
Intron
PRQ49113

Sequence Viewer

Length: 309 bp
ATGCAGAGTGCTTGTAGTATGAGGCTGGCGGGGATGGAGGACACGGCGGAGCTGCTGGAGAAGAAGCAAGCGTCGGAAATTTCGAAGATGAGCTTAGAGGAGGCACCCACTCTCACTCGTGCTTTCAGCCATTACCTCAATTTGATGGGCATTGCTGAAGTTCATCACAGGTCACTGAACGACTTAGGAAAAAAAAAAAAAATAGGGTTAAATTTCATATATCTCTTAGTGACATATTTTACAACCAATCGACTCTTGCTTGCTTCATCATCAGTAGTAGCAACTCTTAATCCCCAATCTATGAATTAA

Protein Analysis

102

Amino Acids

11.36

Weight (kDa)

8.82

Isoelectric Point (pI)

48.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 103
AciI CCGC 2 cut(s) 29, 47
AcsI RAATTY 2 cut(s) 78, 211
AcuI CTGAAG 1 cut(s) 177
AluBI AGCT 2 cut(s) 52, 93
AluI AGCT 2 cut(s) 52, 93
ApeKI GCWGC 1 cut(s) 52
ApoI RAATTY 2 cut(s) 78, 211
AsuII TTCGAA 1 cut(s) 83
BanI GGYRCC 1 cut(s) 103
BauI CACGAG 1 cut(s) 117
BbvI GCAGC 1 cut(s) 39
BccI CCATC 2 cut(s) 28, 139
BceAI ACGGC 1 cut(s) 60
BisI GCNGC 1 cut(s) 53
BlsI GCNGC 1 cut(s) 54
BmiI GGNNCC 1 cut(s) 105
BpmI CTGGAG 1 cut(s) 77
Bpu14I TTCGAA 1 cut(s) 83
Bse3DI GCAATG 1 cut(s) 150
BseGI GGATG 1 cut(s) 39
BseMI GCAATG 1 cut(s) 150
BseRI GAGGAG 1 cut(s) 113
BseXI GCAGC 1 cut(s) 39
BshNI GGYRCC 1 cut(s) 103
Bsp119I TTCGAA 1 cut(s) 83
BspACI CCGC 2 cut(s) 29, 47
BspLI GGNNCC 1 cut(s) 105
BspT104I TTCGAA 1 cut(s) 83
BspT107I GGYRCC 1 cut(s) 103
BsrDI GCAATG 1 cut(s) 150
BssSI CACGAG 1 cut(s) 117
Bst2BI CACGAG 1 cut(s) 117
BstBI TTCGAA 1 cut(s) 83
BstC8I GCNNGC 3 cut(s) 27, 69, 261
BstDEI CTNAG 3 cut(s) 94, 184, 226
BstF5I GGATG 1 cut(s) 39
BstV1I GCAGC 1 cut(s) 39
BtsCI GGATG 1 cut(s) 39
BtsIMutI CAGTG 1 cut(s) 173
Cac8I GCNNGC 3 cut(s) 27, 69, 261
CseI GACGC 1 cut(s) 60
CviJI RGCY 4 cut(s) 25, 52, 93, 129
CviKI_1 RGCY 4 cut(s) 25, 52, 93, 129
DdeI CTNAG 3 cut(s) 94, 184, 226
EciI GGCGGA 1 cut(s) 62
Eco57I CTGAAG 1 cut(s) 177
FaiI YATR 5 cut(s) 20, 218, 220, 235, 302
FalI AAGNNNNNCTT 2 cut(s) 77, 109
FauI CCCGC 1 cut(s) 22
Fnu4HI GCNGC 1 cut(s) 53
FokI GGATG 1 cut(s) 46
Fsp4HI GCNGC 1 cut(s) 53
GluI GCNGC 1 cut(s) 53
GsuI CTGGAG 1 cut(s) 77
HgaI GACGC 1 cut(s) 60
HinfI GANTC 1 cut(s) 252
Hpy188I TCNGA 1 cut(s) 76
Hpy99I CGWCG 1 cut(s) 76
HpyCH4V TGCA 1 cut(s) 4
HpyF3I CTNAG 3 cut(s) 94, 184, 226
LmnI GCTCC 1 cut(s) 49
LpnPI CCDG 3 cut(s) 11, 41, 154
Lsp1109I GCAGC 1 cut(s) 39
MaeIII GTNAC 2 cut(s) 171, 229
MboII GAAGA 2 cut(s) 73, 97
MluCI AATT 4 cut(s) 78, 139, 211, 304
MlyI GAGTC 1 cut(s) 246
MmeI TCCRAC 1 cut(s) 54
MnlI CCTC 5 cut(s) 15, 31, 91, 94, 146
MseI TTAA 3 cut(s) 209, 288, 307
NlaIV GGNNCC 1 cut(s) 105
NmuCI GTSAC 2 cut(s) 171, 229
NspV TTCGAA 1 cut(s) 83
PcsI WCGNNNNNNNCGW 1 cut(s) 80
PkrI GCNGC 1 cut(s) 54
PleI GAGTC 1 cut(s) 246
PpsI GAGTC 1 cut(s) 246
PspN4I GGNNCC 1 cut(s) 105
SaqAI TTAA 3 cut(s) 209, 288, 307
SatI GCNGC 1 cut(s) 53
SchI GAGTC 1 cut(s) 246
SetI ASST 4 cut(s) 54, 95, 138, 173
SfuI TTCGAA 1 cut(s) 83
Sse9I AATT 4 cut(s) 78, 139, 211, 304
SsiI CCGC 2 cut(s) 29, 47
TaqI TCGA 2 cut(s) 83, 250
TasI AATT 4 cut(s) 78, 139, 211, 304
Tru1I TTAA 3 cut(s) 209, 288, 307
Tru9I TTAA 3 cut(s) 209, 288, 307
TscAI CASTG 1 cut(s) 180
TseFI GTSAC 2 cut(s) 171, 229
TseI GCWGC 1 cut(s) 52
Tsp45I GTSAC 2 cut(s) 171, 229
TspDTI ATGAA 3 cut(s) 152, 205, 255
TspRI CASTG 1 cut(s) 180
XapI RAATTY 2 cut(s) 78, 211
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.