Rw7G036970

Phosphoenolpyruvate carboxylase

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr7
Physical Location & Seq
Reverse (-)
56038084 .. 56039289
1206 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw7G036970.1

Sequence Viewer

Length: 381 bp
ATGAGTGTTCTGCATAAGAGAATAGGTTCCCTCTTCTTCTTCTTCTTTCACGCTTTTGTACCTTCTCGTTTGCTTTTGATTTCGTCTTCTTTTCCGATACCTTGTTTGGTTGCTGATGAGGAAAATTCAAACGGAGCATTTTTGCATAGTGCTTGTAGTATGAGGCTGGCAGGGATGGAGGACACGGCGGAGCTGCTGGAGAAGAAGCTAGCGTCGGAAATTTTGACGATGAACTTAGAGGAGGCACTCACTCTCGCTCGTGCTTTCAGCCATTACCTCAATTTGATGGGCATTGCTAAAGTTCATCACATAGTCACTCAACGACTTGATCTCTCTGTTTTATTTTATTTTTTATATTCAATTTTTTGTTTTTTTTTTTAA

Protein Analysis

126

Amino Acids

14.36

Weight (kDa)

6.27

Isoelectric Point (pI)

43.79

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AciI CCGC 1 cut(s) 188
AcsI RAATTY 2 cut(s) 124, 219
AfaI GTAC 1 cut(s) 60
AgsI TTSAA 2 cut(s) 129, 360
AluBI AGCT 2 cut(s) 193, 208
AluI AGCT 2 cut(s) 193, 208
ApeKI GCWGC 1 cut(s) 193
ApoI RAATTY 2 cut(s) 124, 219
Asp700I GAANNNNTTC 1 cut(s) 25
AsuNHI GCTAGC 1 cut(s) 208
BauI CACGAG 1 cut(s) 258
BbsI GAAGAC 1 cut(s) 78
BbvI GCAGC 1 cut(s) 180
BccI CCATC 2 cut(s) 169, 280
BceAI ACGGC 1 cut(s) 201
BfaI CTAG 1 cut(s) 209
BisI GCNGC 1 cut(s) 194
BlsI GCNGC 1 cut(s) 195
BmiI GGNNCC 1 cut(s) 28
BmtI GCTAGC 1 cut(s) 212
BpiI GAAGAC 1 cut(s) 78
BpmI CTGGAG 1 cut(s) 218
Bse3DI GCAATG 1 cut(s) 291
BseGI GGATG 1 cut(s) 180
BseMI GCAATG 1 cut(s) 291
BseRI GAGGAG 1 cut(s) 254
BseXI GCAGC 1 cut(s) 180
Bsp143I GATC 1 cut(s) 328
BspACI CCGC 1 cut(s) 188
BspLI GGNNCC 1 cut(s) 28
BspOI GCTAGC 1 cut(s) 212
BsrDI GCAATG 1 cut(s) 291
BssMI GATC 1 cut(s) 328
BssSI CACGAG 1 cut(s) 258
Bst2BI CACGAG 1 cut(s) 258
Bst6I CTCTTC 1 cut(s) 38
BstC8I GCNNGC 2 cut(s) 168, 210
BstDEI CTNAG 1 cut(s) 235
BstF5I GGATG 1 cut(s) 180
BstKTI GATC 1 cut(s) 331
BstMBI GATC 1 cut(s) 328
BstV1I GCAGC 1 cut(s) 180
BstV2I GAAGAC 1 cut(s) 78
BtsCI GGATG 1 cut(s) 180
Cac8I GCNNGC 2 cut(s) 168, 210
CseI GACGC 1 cut(s) 201
Csp6I GTAC 1 cut(s) 59
CviJI RGCY 4 cut(s) 166, 193, 208, 270
CviKI_1 RGCY 4 cut(s) 166, 193, 208, 270
CviQI GTAC 1 cut(s) 59
DdeI CTNAG 1 cut(s) 235
DpnI GATC 1 cut(s) 330
DpnII GATC 1 cut(s) 328
Eam1104I CTCTTC 1 cut(s) 38
EarI CTCTTC 1 cut(s) 38
EciI GGCGGA 1 cut(s) 203
FaiI YATR 5 cut(s) 15, 147, 161, 311, 355
Fnu4HI GCNGC 1 cut(s) 194
FokI GGATG 1 cut(s) 187
Fsp4HI GCNGC 1 cut(s) 194
FspBI CTAG 1 cut(s) 209
GluI GCNGC 1 cut(s) 194
GsuI CTGGAG 1 cut(s) 218
HgaI GACGC 1 cut(s) 201
Hpy188I TCNGA 2 cut(s) 96, 217
Hpy99I CGWCG 1 cut(s) 217
HpyAV CCTTC 1 cut(s) 72
HpyCH4V TGCA 2 cut(s) 13, 145
HpyF3I CTNAG 1 cut(s) 235
Kzo9I GATC 1 cut(s) 328
LmnI GCTCC 2 cut(s) 134, 190
LpnPI CCDG 3 cut(s) 152, 156, 182
Lsp1109I GCAGC 1 cut(s) 180
MaeI CTAG 1 cut(s) 209
MaeIII GTNAC 1 cut(s) 313
MalI GATC 1 cut(s) 330
MboI GATC 1 cut(s) 328
MboII GAAGA 6 cut(s) 25, 28, 31, 34, 78, 214
MluCI AATT 4 cut(s) 124, 219, 280, 360
MmeI TCCRAC 1 cut(s) 195
MnlI CCTC 7 cut(s) 41, 112, 156, 172, 232, 235, 287
MroXI GAANNNNTTC 1 cut(s) 25
MseI TTAA 1 cut(s) 379
NdeII GATC 1 cut(s) 328
NheI GCTAGC 1 cut(s) 208
NlaIV GGNNCC 1 cut(s) 28
NmuCI GTSAC 1 cut(s) 313
PdmI GAANNNNTTC 1 cut(s) 25
PkrI GCNGC 1 cut(s) 195
PspN4I GGNNCC 1 cut(s) 28
RsaI GTAC 1 cut(s) 60
RsaNI GTAC 1 cut(s) 59
SaqAI TTAA 1 cut(s) 379
SatI GCNGC 1 cut(s) 194
Sau3AI GATC 1 cut(s) 328
SetI ASST 6 cut(s) 28, 64, 103, 195, 210, 279
Sse9I AATT 4 cut(s) 124, 219, 280, 360
SsiI CCGC 1 cut(s) 188
SspMI CTAG 1 cut(s) 209
TasI AATT 4 cut(s) 124, 219, 280, 360
Tru1I TTAA 1 cut(s) 379
Tru9I TTAA 1 cut(s) 379
TseFI GTSAC 1 cut(s) 313
TseI GCWGC 1 cut(s) 193
Tsp45I GTSAC 1 cut(s) 313
TspDTI ATGAA 2 cut(s) 245, 293
TspGWI ACGGA 1 cut(s) 147
XapI RAATTY 2 cut(s) 124, 219
XmnI GAANNNNTTC 1 cut(s) 25
XspI CTAG 1 cut(s) 209
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.