Rh4AG142900

No description available

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr4A
Physical Location & Seq
Forward (+)
36223066 .. 36223374
309 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh4AG142900.1

Sequence Viewer

Length: 309 bp
ATGTTGAACATTATGATTAAAAGACATGTTGAAAATTTGTTTAGACTAATAATATCAAGTTACTTGCAGCATCTTTTAAATTTAAGAGACCGACCTGATCTTACTAGTGAAGACAGAGATATGGTGATTGAAGATCTGGTATTGTTTTCCCAACCTTATTCTCTTCTTCCAAAACCACTTTGCTGGGGCAAGGGGGATTGCATCTTAATGACATTGATATCGTGGATATTCTCTAATTTTCCTTGTGTTTTATATTTTACTCTTGCTTTTATAGGTGTAAGAGATAACTTCTGTATGGCAAACAGATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
No domains found.

Protein Analysis

102

Amino Acids

12.01

Weight (kDa)

6.7

Isoelectric Point (pI)

43.12

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AcsI RAATTY 2 cut(s) 34, 79
AflIII ACRYGT 1 cut(s) 25
AgsI TTSAA 3 cut(s) 7, 32, 131
AhlI ACTAGT 1 cut(s) 104
Alw26I GTCTC 1 cut(s) 81
ApeKI GCWGC 1 cut(s) 67
ApoI RAATTY 2 cut(s) 34, 79
AsuHPI GGTGA 1 cut(s) 136
BbsI GAAGAC 1 cut(s) 117
BbvI GCAGC 1 cut(s) 79
BcoDI GTCTC 1 cut(s) 81
BcuI ACTAGT 1 cut(s) 104
BfaI CTAG 1 cut(s) 105
BglII AGATCT 1 cut(s) 133
BisI GCNGC 1 cut(s) 68
BlsI GCNGC 1 cut(s) 69
BmsI GCATC 2 cut(s) 79, 210
BpiI GAAGAC 1 cut(s) 117
BsaI GGTCTC 1 cut(s) 81
BseXI GCAGC 1 cut(s) 79
BseYI CCCAGC 1 cut(s) 183
BsmAI GTCTC 1 cut(s) 81
Bso31I GGTCTC 1 cut(s) 81
Bsp143I GATC 2 cut(s) 97, 133
BspTNI GGTCTC 1 cut(s) 81
BssMI GATC 2 cut(s) 97, 133
Bst6I CTCTTC 1 cut(s) 168
BstKTI GATC 2 cut(s) 100, 136
BstMAI GTCTC 1 cut(s) 81
BstMBI GATC 2 cut(s) 97, 133
BstNSI RCATGY 1 cut(s) 29
BstV1I GCAGC 1 cut(s) 79
BstV2I GAAGAC 1 cut(s) 117
BstX2I RGATCY 1 cut(s) 133
BstXI CCANNNNNNTGG 1 cut(s) 183
BstYI RGATCY 1 cut(s) 133
CviAII CATG 1 cut(s) 26
DpnI GATC 2 cut(s) 99, 135
DpnII GATC 2 cut(s) 97, 133
DraI TTTAAA 1 cut(s) 78
Eam1104I CTCTTC 1 cut(s) 168
EarI CTCTTC 1 cut(s) 168
Eco31I GGTCTC 1 cut(s) 81
Eco32I GATATC 1 cut(s) 219
EcoRV GATATC 1 cut(s) 219
FaeI CATG 1 cut(s) 29
FaiI YATR 6 cut(s) 14, 27, 122, 253, 272, 296
FatI CATG 1 cut(s) 25
Fnu4HI GCNGC 1 cut(s) 68
Fsp4HI GCNGC 1 cut(s) 68
FspBI CTAG 1 cut(s) 105
GluI GCNGC 1 cut(s) 68
GsaI CCCAGC 1 cut(s) 187
Hin1II CATG 1 cut(s) 29
HphI GGTGA 1 cut(s) 136
HpyCH4V TGCA 2 cut(s) 67, 201
Hsp92II CATG 1 cut(s) 29
Kzo9I GATC 2 cut(s) 97, 133
LpnPI CCDG 3 cut(s) 108, 122, 169
Lsp1109I GCAGC 1 cut(s) 79
LweI GCATC 2 cut(s) 79, 210
MaeI CTAG 1 cut(s) 105
MaeIII GTNAC 1 cut(s) 59
MalI GATC 2 cut(s) 99, 135
MboI GATC 2 cut(s) 97, 133
MboII GAAGA 4 cut(s) 122, 143, 155, 158
MflI RGATCY 1 cut(s) 133
MluCI AATT 3 cut(s) 34, 79, 235
MseI TTAA 4 cut(s) 18, 77, 83, 206
MslI CAYNNNNRTG 1 cut(s) 206
NdeII GATC 2 cut(s) 97, 133
NlaIII CATG 1 cut(s) 29
NspI RCATGY 1 cut(s) 29
PciI ACATGT 1 cut(s) 25
PkrI GCNGC 1 cut(s) 69
PscI ACATGT 1 cut(s) 25
PspFI CCCAGC 1 cut(s) 183
PsuI RGATCY 1 cut(s) 133
RseI CAYNNNNRTG 1 cut(s) 206
SaqAI TTAA 4 cut(s) 18, 77, 83, 206
SatI GCNGC 1 cut(s) 68
Sau3AI GATC 2 cut(s) 97, 133
SetI ASST 3 cut(s) 97, 157, 277
SfaNI GCATC 2 cut(s) 79, 210
SmiMI CAYNNNNRTG 1 cut(s) 206
SpeI ACTAGT 1 cut(s) 104
Sse9I AATT 3 cut(s) 34, 79, 235
SspMI CTAG 1 cut(s) 105
TaqII GACCGA 1 cut(s) 105
TasI AATT 3 cut(s) 34, 79, 235
Tru1I TTAA 4 cut(s) 18, 77, 83, 206
Tru9I TTAA 4 cut(s) 18, 77, 83, 206
TseI GCWGC 1 cut(s) 67
XapI RAATTY 2 cut(s) 34, 79
XceI RCATGY 1 cut(s) 29
XspI CTAG 1 cut(s) 105
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.