Belongs to the class-I aminoacyl-tRNA synthetase family
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G04350 |
| fragaria_vesca | FvH4_3g01570 FvH4_3g01570 |
| malus_domestica | MD10G1325600.v1.1 |
| prunus_persica | Prupe.4G016400_v2.0.a1 Prupe.4G016400_v2.0.a1 |
| pyrus_communis | pycom10g27530 |
| rosa_chinensis | RchiOBHm_Chr5g0002381 |
| rosa_laevigata | RLG00000031024 |
| rosa_multiflora | Rmu_sc0006137.1_g000003 Rmu_sc0017945.1_g000003 |
| rosa_roxburghii | Rroxscaffold_1G00073490 |
| rosa_rugosa | Rorug04G0395800.1 |
| rosa_samantha | Rh5AG018500 Rh5BG021200 Rh5DG019500 |
| rosa_wichuraiana | Rw5G001740 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 2 cut(s) | 812, 2553 |
| Acc36I | ACCTGC | 1 cut(s) | 1765 |
| AccB1I | GGYRCC | 2 cut(s) | 735, 1057 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1220 |
| AccII | CGCG | 2 cut(s) | 17, 221 |
| AciI | CCGC | 7 cut(s) | 221, 432, 1247, 1296, 1899, 2523, 2690 |
| AclI | AACGTT | 2 cut(s) | 1570, 2172 |
| AclWI | GGATC | 7 cut(s) | 633, 683, 2426, 2439, 2687, 2700, 2875 |
| AcoI | YGGCCR | 1 cut(s) | 412 |
| AcsI | RAATTY | 6 cut(s) | 633, 1331, 1423, 1432, 1834, 2062 |
| AcuI | CTGAAG | 4 cut(s) | 668, 738, 1151, 1174 |
| AfaI | GTAC | 8 cut(s) | 751, 756, 1121, 1293, 1414, 1808, 2398, 2758 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 746, 1220, 1240, 1748, 2545 |
| AflIII | ACRYGT | 1 cut(s) | 406 |
| AjnI | CCWGG | 8 cut(s) | 1149, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1973, 2005 |
| AluBI | AGCT | 9 cut(s) | 34, 195, 286, 398, 595, 688, 1165, 1229, 1478 |
| AluI | AGCT | 9 cut(s) | 34, 195, 286, 398, 595, 688, 1165, 1229, 1478 |
| Alw21I | GWGCWC | 1 cut(s) | 288 |
| Alw26I | GTCTC | 5 cut(s) | 530, 984, 1613, 1763, 2768 |
| AlwI | GGATC | 7 cut(s) | 633, 683, 2426, 2439, 2687, 2700, 2875 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 203, 2081 |
| AoxI | GGCC | 5 cut(s) | 260, 412, 893, 1395, 2291 |
| ApeKI | GCWGC | 3 cut(s) | 241, 295, 1478 |
| ApoI | RAATTY | 6 cut(s) | 633, 1331, 1423, 1432, 1834, 2062 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 351, 383, 1016, 1048, 1304, 1336 |
| AseI | ATTAAT | 1 cut(s) | 1455 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 2795 |
| AspLEI | GCGC | 2 cut(s) | 19, 221 |
| AspS9I | GGNCC | 6 cut(s) | 261, 666, 1738, 1825, 2291, 2899 |
| AsuC2I | CCSGG | 1 cut(s) | 1183 |
| AsuHPI | GGTGA | 9 cut(s) | 265, 539, 1235, 1418, 1543, 1628, 2373, 2598, 2860 |
| AsuII | TTCGAA | 1 cut(s) | 325 |
| AvaII | GGWCC | 4 cut(s) | 666, 1738, 1825, 2899 |
| AxyI | CCTNAGG | 1 cut(s) | 2685 |
| BaeGI | GKGCMC | 1 cut(s) | 740 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1404, 1437 |
| BalI | TGGCCA | 1 cut(s) | 414 |
| BamHI | GGATCC | 2 cut(s) | 2431, 2692 |
| BanI | GGYRCC | 2 cut(s) | 735, 1057 |
| BanII | GRGCYC | 2 cut(s) | 288, 1880 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 248, 280 |
| BauI | CACGAG | 1 cut(s) | 1308 |
| BbsI | GAAGAC | 2 cut(s) | 1180, 1862 |
| Bbv12I | GWGCWC | 1 cut(s) | 288 |
| BbvCI | CCTCAGC | 1 cut(s) | 2628 |
| BbvI | GCAGC | 3 cut(s) | 253, 307, 1465 |
| BceAI | ACGGC | 1 cut(s) | 163 |
| BciT130I | CCWGG | 8 cut(s) | 1151, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| BclI | TGATCA | 1 cut(s) | 859 |
| BcnI | CCSGG | 1 cut(s) | 1183 |
| BcoDI | GTCTC | 5 cut(s) | 530, 984, 1613, 1763, 2768 |
| BfaI | CTAG | 1 cut(s) | 450 |
| BfmI | CTRYAG | 1 cut(s) | 2073 |
| BfuAI | ACCTGC | 1 cut(s) | 1765 |
| BglII | AGATCT | 1 cut(s) | 1126 |
| BisI | GCNGC | 4 cut(s) | 222, 242, 296, 1479 |
| BlsI | GCNGC | 4 cut(s) | 223, 243, 297, 1480 |
| Bme1390I | CCNGG | 9 cut(s) | 1151, 1183, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| Bme18I | GGWCC | 4 cut(s) | 666, 1738, 1825, 2899 |
| BmgT120I | GGNCC | 6 cut(s) | 261, 666, 1738, 1825, 2291, 2899 |
| BmrFI | CCNGG | 9 cut(s) | 1151, 1183, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| BmrI | ACTGGG | 6 cut(s) | 384, 631, 664, 1586, 1780, 1874 |
| BmsI | GCATC | 6 cut(s) | 490, 825, 1075, 1334, 1350, 2816 |
| BmuI | ACTGGG | 6 cut(s) | 384, 631, 664, 1586, 1780, 1874 |
| BpiI | GAAGAC | 2 cut(s) | 1180, 1862 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 2810, 2842 |
| BpmI | CTGGAG | 3 cut(s) | 14, 1172, 2383 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2628 |
| Bpu14I | TTCGAA | 1 cut(s) | 325 |
| BpuEI | CTTGAG | 1 cut(s) | 824 |
| BpuMI | CCSGG | 1 cut(s) | 1183 |
| Bsa29I | ATCGAT | 1 cut(s) | 2344 |
| BsaBI | GATNNNNATC | 3 cut(s) | 1004, 1374, 2430 |
| BsaI | GGTCTC | 1 cut(s) | 2768 |
| BsaJI | CCNNGG | 5 cut(s) | 1182, 1258, 1734, 2008, 2872 |
| BsaWI | WCCGGW | 1 cut(s) | 1060 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 12, 42 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 746, 1220, 1240, 1748, 2545 |
| Bse21I | CCTNAGG | 1 cut(s) | 2685 |
| Bse3DI | GCAATG | 3 cut(s) | 836, 2469, 2532 |
| Bse8I | GATNNNNATC | 3 cut(s) | 1004, 1374, 2430 |
| BseBI | CCWGG | 8 cut(s) | 1151, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| BseCI | ATCGAT | 1 cut(s) | 2344 |
| BseDI | CCNNGG | 5 cut(s) | 1182, 1258, 1734, 2008, 2872 |
| BseJI | GATNNNNATC | 3 cut(s) | 1004, 1374, 2430 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 746, 1220, 1240, 1748, 2545 |
| BseMI | GCAATG | 3 cut(s) | 836, 2469, 2532 |
| BseMII | CTCAG | 7 cut(s) | 84, 195, 210, 939, 1152, 1393, 2619 |
| BseRI | GAGGAG | 2 cut(s) | 1130, 2801 |
| BseSI | GKGCMC | 1 cut(s) | 740 |
| BseXI | GCAGC | 3 cut(s) | 253, 307, 1465 |
| BseYI | CCCAGC | 2 cut(s) | 398, 591 |
| BsgI | GTGCAG | 1 cut(s) | 726 |
| Bsh1236I | CGCG | 2 cut(s) | 17, 221 |
| BshFI | GGCC | 5 cut(s) | 262, 414, 895, 1397, 2293 |
| BshNI | GGYRCC | 2 cut(s) | 735, 1057 |
| BshVI | ATCGAT | 1 cut(s) | 2344 |
| BsiHKAI | GWGCWC | 1 cut(s) | 288 |
| BsiSI | CCGG | 3 cut(s) | 1061, 1182, 1364 |
| BslFI | GGGAC | 2 cut(s) | 2664, 2855 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 746, 1220, 1240, 1748, 2545 |
| BsmAI | GTCTC | 5 cut(s) | 530, 984, 1613, 1763, 2768 |
| BsmFI | GGGAC | 2 cut(s) | 2664, 2855 |
| BsmI | GAATGC | 1 cut(s) | 2797 |
| BsnI | GGCC | 5 cut(s) | 262, 414, 895, 1397, 2293 |
| Bso31I | GGTCTC | 1 cut(s) | 2768 |
| Bsp119I | TTCGAA | 1 cut(s) | 325 |
| Bsp1286I | GDGCHC | 3 cut(s) | 288, 740, 1880 |
| BspACI | CCGC | 7 cut(s) | 221, 432, 1247, 1296, 1899, 2523, 2690 |
| BspANI | GGCC | 5 cut(s) | 262, 414, 895, 1397, 2293 |
| BspCNI | CTCAG | 7 cut(s) | 83, 196, 209, 940, 1153, 1392, 2620 |
| BspDI | ATCGAT | 1 cut(s) | 2344 |
| BspFNI | CGCG | 2 cut(s) | 17, 221 |
| BspHI | TCATGA | 1 cut(s) | 2130 |
| BspMAI | CTGCAG | 1 cut(s) | 2077 |
| BspMI | ACCTGC | 1 cut(s) | 1765 |
| BspPI | GGATC | 7 cut(s) | 633, 683, 2426, 2439, 2687, 2700, 2875 |
| BspT104I | TTCGAA | 1 cut(s) | 325 |
| BspT107I | GGYRCC | 2 cut(s) | 735, 1057 |
| BspTNI | GGTCTC | 1 cut(s) | 2768 |
| BsrDI | GCAATG | 3 cut(s) | 836, 2469, 2532 |
| BssECI | CCNNGG | 5 cut(s) | 1182, 1258, 1734, 2008, 2872 |
| BssSI | CACGAG | 1 cut(s) | 1308 |
| BssT1I | CCWWGG | 1 cut(s) | 1734 |
| Bst2BI | CACGAG | 1 cut(s) | 1308 |
| Bst2UI | CCWGG | 8 cut(s) | 1151, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| Bst4CI | ACNGT | 7 cut(s) | 253, 754, 1417, 1441, 1624, 2610, 2923 |
| Bst6I | CTCTTC | 3 cut(s) | 251, 762, 2766 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 835 |
| BstBI | TTCGAA | 1 cut(s) | 325 |
| BstC8I | GCNNGC | 2 cut(s) | 516, 791 |
| BstFNI | CGCG | 2 cut(s) | 17, 221 |
| BstHHI | GCGC | 2 cut(s) | 19, 221 |
| BstMAI | GTCTC | 5 cut(s) | 530, 984, 1613, 1763, 2768 |
| BstNI | CCWGG | 8 cut(s) | 1151, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| BstNSI | RCATGY | 2 cut(s) | 410, 1913 |
| BstSCI | CCNGG | 9 cut(s) | 1149, 1181, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| BstSFI | CTRYAG | 1 cut(s) | 2073 |
| BstSLI | GKGCMC | 1 cut(s) | 740 |
| BstUI | CGCG | 2 cut(s) | 17, 221 |
| BstV1I | GCAGC | 3 cut(s) | 253, 307, 1465 |
| BstV2I | GAAGAC | 2 cut(s) | 1180, 1862 |
| BstX2I | RGATCY | 5 cut(s) | 675, 1126, 2431, 2692, 2880 |
| BstXI | CCANNNNNNTGG | 6 cut(s) | 422, 495, 732, 1350, 1793, 2665 |
| BstYI | RGATCY | 5 cut(s) | 675, 1126, 2431, 2692, 2880 |
| Bsu15I | ATCGAT | 1 cut(s) | 2344 |
| Bsu36I | CCTNAGG | 1 cut(s) | 2685 |
| BsuRI | GGCC | 5 cut(s) | 262, 414, 895, 1397, 2293 |
| BsuTUI | ATCGAT | 1 cut(s) | 2344 |
| BtsI | GCAGTG | 2 cut(s) | 166, 979 |
| BveI | ACCTGC | 1 cut(s) | 1765 |
| Cac8I | GCNNGC | 2 cut(s) | 516, 791 |
| CaiI | CAGNNNCTG | 2 cut(s) | 203, 2081 |
| CciI | TCATGA | 1 cut(s) | 2130 |
| CfoI | GCGC | 2 cut(s) | 19, 221 |
| Cfr13I | GGNCC | 6 cut(s) | 261, 666, 1738, 1825, 2291, 2899 |
| ClaI | ATCGAT | 1 cut(s) | 2344 |
| Csp6I | GTAC | 8 cut(s) | 750, 755, 1120, 1292, 1413, 1807, 2397, 2757 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1827, 1862 |
| CviAII | CATG | 5 cut(s) | 407, 1780, 1910, 2131, 2287 |
| CviQI | GTAC | 8 cut(s) | 750, 755, 1120, 1292, 1413, 1807, 2397, 2757 |
| EaeI | YGGCCR | 1 cut(s) | 412 |
| Eam1104I | CTCTTC | 3 cut(s) | 251, 762, 2766 |
| EarI | CTCTTC | 3 cut(s) | 251, 762, 2766 |
| EciI | GGCGGA | 1 cut(s) | 2705 |
| Ecl136II | GAGCTC | 1 cut(s) | 286 |
| Eco130I | CCWWGG | 1 cut(s) | 1734 |
| Eco147I | AGGCCT | 1 cut(s) | 1397 |
| Eco24I | GRGCYC | 2 cut(s) | 288, 1880 |
| Eco31I | GGTCTC | 1 cut(s) | 2768 |
| Eco47I | GGWCC | 4 cut(s) | 666, 1738, 1825, 2899 |
| Eco53kI | GAGCTC | 1 cut(s) | 286 |
| Eco57I | CTGAAG | 4 cut(s) | 668, 738, 1151, 1174 |
| Eco81I | CCTNAGG | 1 cut(s) | 2685 |
| EcoICRI | GAGCTC | 1 cut(s) | 286 |
| EcoO109I | RGGNCCY | 2 cut(s) | 261, 1738 |
| EcoRII | CCWGG | 8 cut(s) | 1149, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| EcoT14I | CCWWGG | 1 cut(s) | 1734 |
| EcoT22I | ATGCAT | 2 cut(s) | 505, 2471 |
| EcoT38I | GRGCYC | 2 cut(s) | 288, 1880 |
| ErhI | CCWWGG | 1 cut(s) | 1734 |
| FaeI | CATG | 5 cut(s) | 410, 1783, 1913, 2134, 2290 |
| FaqI | GGGAC | 2 cut(s) | 2664, 2855 |
| FatI | CATG | 5 cut(s) | 406, 1779, 1909, 2130, 2286 |
| FauI | CCCGC | 1 cut(s) | 1303 |
| FauNDI | CATATG | 4 cut(s) | 616, 853, 2622, 2671 |
| FbaI | TGATCA | 1 cut(s) | 859 |
| Fnu4HI | GCNGC | 4 cut(s) | 222, 242, 296, 1479 |
| FriOI | GRGCYC | 2 cut(s) | 288, 1880 |
| Fsp4HI | GCNGC | 4 cut(s) | 222, 242, 296, 1479 |
| FspBI | CTAG | 1 cut(s) | 450 |
| GlaI | GCGC | 2 cut(s) | 18, 220 |
| GluI | GCNGC | 4 cut(s) | 222, 242, 296, 1479 |
| GsaI | CCCAGC | 2 cut(s) | 402, 595 |
| GsuI | CTGGAG | 3 cut(s) | 14, 1172, 2383 |
| HaeIII | GGCC | 5 cut(s) | 262, 414, 895, 1397, 2293 |
| HapII | CCGG | 3 cut(s) | 1061, 1182, 1364 |
| HhaI | GCGC | 2 cut(s) | 19, 221 |
| Hin1II | CATG | 5 cut(s) | 410, 1783, 1913, 2134, 2290 |
| Hin6I | GCGC | 2 cut(s) | 17, 219 |
| HinP1I | GCGC | 2 cut(s) | 17, 219 |
| HinfI | GANTC | 9 cut(s) | 108, 609, 2051, 2078, 2144, 2261, 2303, 2505, 2711 |
| HpaII | CCGG | 3 cut(s) | 1061, 1182, 1364 |
| HphI | GGTGA | 9 cut(s) | 265, 539, 1235, 1418, 1543, 1628, 2373, 2598, 2860 |
| Hpy166II | GTNNAC | 4 cut(s) | 1122, 1534, 1977, 2381 |
| Hpy8I | GTNNAC | 4 cut(s) | 1122, 1534, 1977, 2381 |
| Hpy99I | CGWCG | 1 cut(s) | 1767 |
| HpyAV | CCTTC | 9 cut(s) | 93, 935, 1165, 1403, 2327, 2470, 2701, 2839, 2912 |
| HpyCH4III | ACNGT | 7 cut(s) | 253, 754, 1417, 1441, 1624, 2610, 2923 |
| HpyCH4IV | ACGT | 7 cut(s) | 61, 460, 1570, 2172, 2188, 2269, 2910 |
| HpySE526I | ACGT | 7 cut(s) | 61, 460, 1570, 2172, 2188, 2269, 2910 |
| Hsp92II | CATG | 5 cut(s) | 410, 1783, 1913, 2134, 2290 |
| HspAI | GCGC | 2 cut(s) | 17, 219 |
| Ksp22I | TGATCA | 1 cut(s) | 859 |
| LmnI | GCTCC | 6 cut(s) | 395, 593, 1037, 1063, 1875, 2443 |
| Lsp1109I | GCAGC | 3 cut(s) | 253, 307, 1465 |
| LweI | GCATC | 6 cut(s) | 490, 825, 1075, 1334, 1350, 2816 |
| MaeI | CTAG | 1 cut(s) | 450 |
| MaeII | ACGT | 7 cut(s) | 61, 460, 1570, 2172, 2188, 2269, 2910 |
| MaeIII | GTNAC | 8 cut(s) | 11, 247, 402, 470, 1145, 1310, 2419, 2479 |
| MflI | RGATCY | 5 cut(s) | 675, 1126, 2431, 2692, 2880 |
| MhlI | GDGCHC | 3 cut(s) | 288, 740, 1880 |
| MlsI | TGGCCA | 1 cut(s) | 414 |
| MluNI | TGGCCA | 1 cut(s) | 414 |
| MlyI | GAGTC | 2 cut(s) | 2045, 2072 |
| MmeI | TCCRAC | 1 cut(s) | 2824 |
| Mox20I | TGGCCA | 1 cut(s) | 414 |
| Mph1103I | ATGCAT | 2 cut(s) | 505, 2471 |
| MroXI | GAANNNNTTC | 1 cut(s) | 2795 |
| MscI | TGGCCA | 1 cut(s) | 414 |
| MseI | TTAA | 8 cut(s) | 456, 597, 692, 729, 1455, 1745, 2541, 2853 |
| MslI | CAYNNNNRTG | 1 cut(s) | 1993 |
| Msp20I | TGGCCA | 1 cut(s) | 414 |
| MspI | CCGG | 3 cut(s) | 1061, 1182, 1364 |
| MspR9I | CCNGG | 9 cut(s) | 1151, 1183, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| Mva1269I | GAATGC | 1 cut(s) | 2797 |
| MvaI | CCWGG | 8 cut(s) | 1151, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| MvnI | CGCG | 2 cut(s) | 17, 221 |
| NciI | CCSGG | 1 cut(s) | 1183 |
| NdeI | CATATG | 4 cut(s) | 616, 853, 2622, 2671 |
| NlaIII | CATG | 5 cut(s) | 410, 1783, 1913, 2134, 2290 |
| NmeAIII | GCCGAG | 1 cut(s) | 1543 |
| NmuCI | GTSAC | 4 cut(s) | 11, 247, 1145, 1310 |
| NsiI | ATGCAT | 2 cut(s) | 505, 2471 |
| NspI | RCATGY | 2 cut(s) | 410, 1913 |
| NspV | TTCGAA | 1 cut(s) | 325 |
| PagI | TCATGA | 1 cut(s) | 2130 |
| PceI | AGGCCT | 1 cut(s) | 1397 |
| PciI | ACATGT | 1 cut(s) | 406 |
| PctI | GAATGC | 1 cut(s) | 2797 |
| PdmI | GAANNNNTTC | 1 cut(s) | 2795 |
| PfeI | GAWTC | 7 cut(s) | 108, 609, 2144, 2261, 2303, 2505, 2711 |
| PflFI | GACNNNGTC | 1 cut(s) | 1253 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1220 |
| PfoI | TCCNGGA | 1 cut(s) | 2895 |
| PkrI | GCNGC | 4 cut(s) | 223, 243, 297, 1480 |
| PleI | GAGTC | 2 cut(s) | 2045, 2072 |
| PpsI | GAGTC | 2 cut(s) | 2045, 2072 |
| PpuMI | RGGWCCY | 1 cut(s) | 1738 |
| PscI | ACATGT | 1 cut(s) | 406 |
| PshBI | ATTAAT | 1 cut(s) | 1455 |
| PsiI | TTATAA | 2 cut(s) | 812, 2553 |
| Psp124BI | GAGCTC | 1 cut(s) | 288 |
| Psp1406I | AACGTT | 2 cut(s) | 1570, 2172 |
| Psp5II | RGGWCCY | 1 cut(s) | 1738 |
| Psp6I | CCWGG | 8 cut(s) | 1149, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| PspFI | CCCAGC | 2 cut(s) | 398, 591 |
| PspGI | CCWGG | 8 cut(s) | 1149, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| PspPI | GGNCC | 6 cut(s) | 261, 666, 1738, 1825, 2291, 2899 |
| PspPPI | RGGWCCY | 1 cut(s) | 1738 |
| PstI | CTGCAG | 1 cut(s) | 2077 |
| PstNI | CAGNNNCTG | 2 cut(s) | 203, 2081 |
| PsuI | RGATCY | 5 cut(s) | 675, 1126, 2431, 2692, 2880 |
| PsyI | GACNNNGTC | 1 cut(s) | 1253 |
| RsaI | GTAC | 8 cut(s) | 751, 756, 1121, 1293, 1414, 1808, 2398, 2758 |
| RsaNI | GTAC | 8 cut(s) | 750, 755, 1120, 1292, 1413, 1807, 2397, 2757 |
| RseI | CAYNNNNRTG | 1 cut(s) | 1993 |
| SacI | GAGCTC | 1 cut(s) | 288 |
| SaqAI | TTAA | 8 cut(s) | 456, 597, 692, 729, 1455, 1745, 2541, 2853 |
| SatI | GCNGC | 4 cut(s) | 222, 242, 296, 1479 |
| Sau96I | GGNCC | 6 cut(s) | 261, 666, 1738, 1825, 2291, 2899 |
| SchI | GAGTC | 2 cut(s) | 2045, 2072 |
| ScrFI | CCNGG | 9 cut(s) | 1151, 1183, 1259, 2009, 2314, 2362, 2765, 2874, 2897 |
| SduI | GDGCHC | 3 cut(s) | 288, 740, 1880 |
| SfaNI | GCATC | 6 cut(s) | 490, 825, 1075, 1334, 1350, 2816 |
| SfcI | CTRYAG | 1 cut(s) | 2073 |
| SfuI | TTCGAA | 1 cut(s) | 325 |
| SinI | GGWCC | 4 cut(s) | 666, 1738, 1825, 2899 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 1993 |
| SmlI | CTYRAG | 1 cut(s) | 839 |
| SmoI | CTYRAG | 1 cut(s) | 839 |
| SseBI | AGGCCT | 1 cut(s) | 1397 |
| SsiI | CCGC | 7 cut(s) | 221, 432, 1247, 1296, 1899, 2523, 2690 |
| SspI | AATATT | 1 cut(s) | 656 |
| SspMI | CTAG | 1 cut(s) | 450 |
| SstI | GAGCTC | 1 cut(s) | 288 |
| StuI | AGGCCT | 1 cut(s) | 1397 |
| StyD4I | CCNGG | 9 cut(s) | 1149, 1181, 1257, 2007, 2312, 2360, 2763, 2872, 2895 |
| StyI | CCWWGG | 1 cut(s) | 1734 |
| TaaI | ACNGT | 7 cut(s) | 253, 754, 1417, 1441, 1624, 2610, 2923 |
| TaiI | ACGT | 7 cut(s) | 64, 463, 1573, 2175, 2191, 2272, 2913 |
| TaqI | TCGA | 5 cut(s) | 282, 325, 534, 1762, 2344 |
| TatI | WGTACW | 2 cut(s) | 754, 1119 |
| TauI | GCSGC | 1 cut(s) | 224 |
| TfiI | GAWTC | 7 cut(s) | 108, 609, 2144, 2261, 2303, 2505, 2711 |
| Tru1I | TTAA | 8 cut(s) | 456, 597, 692, 729, 1455, 1745, 2541, 2853 |
| Tru9I | TTAA | 8 cut(s) | 456, 597, 692, 729, 1455, 1745, 2541, 2853 |
| TseFI | GTSAC | 4 cut(s) | 11, 247, 1145, 1310 |
| TseI | GCWGC | 3 cut(s) | 241, 295, 1478 |
| Tsp45I | GTSAC | 4 cut(s) | 11, 247, 1145, 1310 |
| TspDTI | ATGAA | 7 cut(s) | 351, 780, 839, 2147, 2171, 2275, 2292 |
| TspGWI | ACGGA | 1 cut(s) | 659 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1253 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1220 |
| VpaK11BI | GGWCC | 4 cut(s) | 666, 1738, 1825, 2899 |
| VspI | ATTAAT | 1 cut(s) | 1455 |
| XapI | RAATTY | 6 cut(s) | 633, 1331, 1423, 1432, 1834, 2062 |
| XceI | RCATGY | 2 cut(s) | 410, 1913 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 828 |
| XmnI | GAANNNNTTC | 1 cut(s) | 2795 |
| XspI | CTAG | 1 cut(s) | 450 |
| Zsp2I | ATGCAT | 2 cut(s) | 505, 2471 |