Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0010721

Physical Location & Seq

Genomic Coordinates Forward (+)

902765 .. 905598

Gene Structure 2834 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G019400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 876 bp

ATGTCCGAGGCAGAGGCAAAATCAGCTGCTCCAAGCGCTGAGCTTTTGGAATGGCCGAAGAAGGACAACCGTCGCCTCCTTCACGCCGTGTACCGCGTCGGCGATCTCGATCGCACGATCAAGTTTTACACGGAGGCTCTAGGGATGAAGCTGTTGAGGAAGAGGGATATTCCTGAAGAGAAATACTCGAATGCATTTCTGGGATTTGGGCCTGAAGAGTCTCACTTCGTGGTCGAGTTGACCTACAATTATGGCGTGTCTTCTTATGATATCGGGACTGGTTTTGGACATTTCGCCATTGCTACTCCCGATGTTAAAAAGCTAGTTGAAGAGGTTCGTGCCAAAGGTGGTAATGTGACGAGGGAGCCTGGTCCTGTGAAAGGTGGGAACAGCATCATTGCCTTTGTGAAGGACCCAGATGGTTACACATTTGAGATCATTCAGCGACCTTCCACCCCTGAGCCACTTTGTCAAGTAATGCTCCGCGTTGGTGATCTTGAACGCTCAATCAAGTTCTATGAAAAGGCTTTGGGCTTGAAGCTATTAAGGACGATTGAGAGGCCTGAATACAAGTACAACATAGCCATCCTGGGATATGCAGAGGAAGACCAGACAACCATTTTGGAGTTGACTTATAACTATGGTGTGACTGAATACACCAAGGGAAACGCATATGCGCAGATTGCTATTGGTACTGATGATGTCTACAAAAGTGCTGAGGTTGTCAACTTGGTTACACAAGAACTTGGAGGAAAGATAACCAGGCAACCTGGACCAATTCCCGGACTCAACACCAAGATCACTTCTTTTCTGGATCCAGATGGCTGGAAAACTGTGCTGGTTGACAATGAGGATTTTCTCAAGGAACTGCAGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004462 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0006081 GO:0006082 GO:0006089 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009438 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016151 GO:0016829 GO:0016846 GO:0019243 GO:0019752 GO:0019863 GO:0019865 GO:0031967 GO:0031975 GO:0032787 GO:0042180 GO:0042182 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046185 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0051596 GO:0061727 GO:0071704 GO:0071944 GO:1901575 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

292

Amino Acids

32.6

Weight (kDa)

5.27

Isoelectric Point (pI)

34.76

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0010721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11840 AT1G11840 AT1G11840 AT1G11840 AT1G11840 AT1G11840
fragaria_vesca	FvH4_3g01920
malus_domestica	MD05G1348100.v1.1
prunus_persica	Prupe.4G019400_v2.0.a1
pyrus_communis	pycom05g31560 pycom10g27300
rosa_chinensis	RchiOBHm_Chr5g0002821
rosa_laevigata	RLG00000031062
rosa_multiflora	Rmu_co8395511.1_g000001 Rmu_sc0013603.1_g000013
rosa_roxburghii	Rroxscaffold_1G00073030
rosa_rugosa	Rorug04G0399900
rosa_samantha	Rh5BG025400 Rh5DG023900
rosa_wichuraiana	Rw5G002110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	636
Acc16I	TGCGCA	1 cut(s)	678
AccI	GTMKAC	1 cut(s)	705
AccII	CGCG	2 cut(s)	96, 486
AciI	CCGC	2 cut(s)	94, 484
AclWI	GGATC	2 cut(s)	809, 822
AcoI	YGGCCR	1 cut(s)	53
AcuI	CTGAAG	2 cut(s)	195, 234
AdeI	CACNNNGTG	2 cut(s)	88, 229
AfaI	GTAC	3 cut(s)	92, 575, 694
AfeI	AGCGCT	1 cut(s)	37
AfiI	CCNNNNNNNGG	2 cut(s)	380, 782
AgsI	TTSAA	3 cut(s)	329, 500, 538
AjnI	CCWGG	4 cut(s)	367, 588, 761, 769
AluBI	AGCT	5 cut(s)	26, 43, 151, 322, 541
AluI	AGCT	5 cut(s)	26, 43, 151, 322, 541
Alw26I	GTCTC	1 cut(s)	225
AlwI	GGATC	2 cut(s)	809, 822
Aor51HI	AGCGCT	1 cut(s)	37
AoxI	GGCC	3 cut(s)	53, 209, 560
ApeKI	GCWGC	1 cut(s)	26
ArsI	GACNNNNNNTTYG	2 cut(s)	604, 636
Asp700I	GAANNNNTTC	1 cut(s)	333
AspLEI	GCGC	2 cut(s)	38, 679
AspS9I	GGNCC	4 cut(s)	209, 371, 412, 773
AsuC2I	CCSGG	1 cut(s)	783
AsuHPI	GGTGA	1 cut(s)	503
AvaII	GGWCC	3 cut(s)	371, 412, 773
BamHI	GGATCC	1 cut(s)	814
BbsI	GAAGAC	2 cut(s)	252, 612
BbvCI	CCTCAGC	1 cut(s)	717
BbvI	GCAGC	1 cut(s)	13
BccI	CCATC	3 cut(s)	413, 593, 815
BceAI	ACGGC	1 cut(s)	71
BciT130I	CCWGG	4 cut(s)	369, 590, 763, 771
BcnI	CCSGG	1 cut(s)	783
BcoDI	GTCTC	1 cut(s)	225
BfaI	CTAG	2 cut(s)	140, 323
BfmI	CTRYAG	1 cut(s)	869
BfoI	RGCGCY	1 cut(s)	39
BisI	GCNGC	1 cut(s)	27
BlpI	GCTNAGC	1 cut(s)	39
BlsI	GCNGC	1 cut(s)	28
Bme1390I	CCNGG	5 cut(s)	369, 590, 763, 771, 783
Bme18I	GGWCC	3 cut(s)	371, 412, 773
BmgT120I	GGNCC	4 cut(s)	209, 371, 412, 773
BmiI	GGNNCC	3 cut(s)	366, 414, 816
BmrFI	CCNGG	5 cut(s)	369, 590, 763, 771, 783
BmsI	GCATC	1 cut(s)	402
BoxI	GACNNNNGTC	1 cut(s)	69
BpiI	GAAGAC	2 cut(s)	252, 612
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
Bpu10I	CCTNAGC	2 cut(s)	459, 717
Bpu1102I	GCTNAGC	1 cut(s)	39
BpuEI	CTTGAG	1 cut(s)	845
BpuMI	CCSGG	1 cut(s)	783
BsaBI	GATNNNNATC	1 cut(s)	108
BsaJI	CCNNGG	3 cut(s)	6, 589, 660
Bsc4I	CCNNNNNNNGG	2 cut(s)	380, 782
Bse1I	ACTGG	1 cut(s)	283
Bse3DI	GCAATG	2 cut(s)	297, 396
Bse8I	GATNNNNATC	1 cut(s)	108
BseBI	CCWGG	4 cut(s)	369, 590, 763, 771
BseDI	CCNNGG	3 cut(s)	6, 589, 660
BseGI	GGATG	2 cut(s)	150, 585
BseJI	GATNNNNATC	1 cut(s)	108
BseLI	CCNNNNNNNGG	2 cut(s)	380, 782
BseMI	GCAATG	2 cut(s)	297, 396
BseMII	CTCAG	3 cut(s)	30, 450, 708
BseNI	ACTGG	1 cut(s)	283
BseXI	GCAGC	1 cut(s)	13
Bsh1236I	CGCG	2 cut(s)	96, 486
Bsh1285I	CGRYCG	1 cut(s)	112
BshFI	GGCC	3 cut(s)	55, 211, 562
BsiEI	CGRYCG	1 cut(s)	112
BsiSI	CCGG	1 cut(s)	783
BslFI	GGGAC	1 cut(s)	289
BslI	CCNNNNNNNGG	2 cut(s)	380, 782
BsmAI	GTCTC	1 cut(s)	225
BsmFI	GGGAC	1 cut(s)	289
BsmI	GAATGC	1 cut(s)	196
BsnI	GGCC	3 cut(s)	55, 211, 562
Bsp143I	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
Bsp1720I	GCTNAGC	1 cut(s)	39
BspACI	CCGC	2 cut(s)	94, 484
BspANI	GGCC	3 cut(s)	55, 211, 562
BspCNI	CTCAG	3 cut(s)	31, 451, 709
BspFNI	CGCG	2 cut(s)	96, 486
BspLI	GGNNCC	3 cut(s)	366, 414, 816
BspMAI	CTGCAG	1 cut(s)	873
BspPI	GGATC	2 cut(s)	809, 822
BsrDI	GCAATG	2 cut(s)	297, 396
BsrI	ACTGG	1 cut(s)	283
BssECI	CCNNGG	3 cut(s)	6, 589, 660
BssMI	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
BssT1I	CCWWGG	1 cut(s)	660
Bst2UI	CCWGG	4 cut(s)	369, 590, 763, 771
Bst4CI	ACNGT	2 cut(s)	71, 835
Bst6I	CTCTTC	4 cut(s)	155, 171, 210, 324
BstDEI	CTNAG	3 cut(s)	39, 459, 717
BstENI	CCTNNNNNAGG	1 cut(s)	378
BstF5I	GGATG	2 cut(s)	150, 585
BstFNI	CGCG	2 cut(s)	96, 486
BstH2I	RGCGCY	1 cut(s)	39
BstHHI	GCGC	2 cut(s)	38, 679
BstKTI	GATC	7 cut(s)	106, 112, 120, 438, 496, 801, 817
BstMAI	GTCTC	1 cut(s)	225
BstMBI	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
BstMCI	CGRYCG	1 cut(s)	112
BstMWI	GCNNNNNNNGC	3 cut(s)	23, 35, 683
BstNI	CCWGG	4 cut(s)	369, 590, 763, 771
BstPAI	GACNNNNGTC	1 cut(s)	69
BstSCI	CCNGG	5 cut(s)	367, 588, 761, 769, 781
BstSFI	CTRYAG	1 cut(s)	869
BstUI	CGCG	2 cut(s)	96, 486
BstV1I	GCAGC	1 cut(s)	13
BstV2I	GAAGAC	2 cut(s)	252, 612
BstX2I	RGATCY	1 cut(s)	814
BstXI	CCANNNNNNTGG	1 cut(s)	825
BstYI	RGATCY	1 cut(s)	814
BsuRI	GGCC	3 cut(s)	55, 211, 562
BtsCI	GGATG	2 cut(s)	150, 585
CfoI	GCGC	2 cut(s)	38, 679
Cfr13I	GGNCC	4 cut(s)	209, 371, 412, 773
CseI	GACGC	1 cut(s)	85
Csp6I	GTAC	3 cut(s)	91, 574, 693
CviQI	GTAC	3 cut(s)	91, 574, 693
DdeI	CTNAG	3 cut(s)	39, 459, 717
DpnI	GATC	7 cut(s)	105, 111, 119, 437, 495, 800, 816
DpnII	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
DraIII	CACNNNGTG	2 cut(s)	88, 229
EaeI	YGGCCR	1 cut(s)	53
Eam1104I	CTCTTC	4 cut(s)	155, 171, 210, 324
EarI	CTCTTC	4 cut(s)	155, 171, 210, 324
Eco130I	CCWWGG	1 cut(s)	660
Eco147I	AGGCCT	1 cut(s)	562
Eco32I	GATATC	1 cut(s)	271
Eco47I	GGWCC	3 cut(s)	371, 412, 773
Eco47III	AGCGCT	1 cut(s)	37
Eco57I	CTGAAG	2 cut(s)	195, 234
EcoNI	CCTNNNNNAGG	1 cut(s)	378
EcoO109I	RGGNCCY	1 cut(s)	412
EcoRII	CCWGG	4 cut(s)	367, 588, 761, 769
EcoRV	GATATC	1 cut(s)	271
EcoT14I	CCWWGG	1 cut(s)	660
EcoT22I	ATGCAT	1 cut(s)	196
ErhI	CCWWGG	1 cut(s)	660
FaiI	YATR	9 cut(s)	252, 267, 519, 581, 597, 636, 642, 673, 675
FaqI	GGGAC	1 cut(s)	289
FauNDI	CATATG	1 cut(s)	673
FblI	GTMKAC	1 cut(s)	705
Fnu4HI	GCNGC	1 cut(s)	27
FokI	GGATG	2 cut(s)	157, 572
Fsp4HI	GCNGC	1 cut(s)	27
FspBI	CTAG	2 cut(s)	140, 323
FspI	TGCGCA	1 cut(s)	678
GlaI	GCGC	2 cut(s)	37, 678
GluI	GCNGC	1 cut(s)	27
HaeII	RGCGCY	1 cut(s)	39
HaeIII	GGCC	3 cut(s)	55, 211, 562
HapII	CCGG	1 cut(s)	783
HgaI	GACGC	1 cut(s)	85
HhaI	GCGC	2 cut(s)	38, 679
Hin6I	GCGC	2 cut(s)	36, 677
HinP1I	GCGC	2 cut(s)	36, 677
HincII	GTYRAC	4 cut(s)	240, 630, 727, 844
HindII	GTYRAC	4 cut(s)	240, 630, 727, 844
HinfI	GANTC	2 cut(s)	218, 786
HpaII	CCGG	1 cut(s)	783
HphI	GGTGA	1 cut(s)	503
Hpy166II	GTNNAC	6 cut(s)	91, 240, 630, 706, 727, 844
Hpy188I	TCNGA	1 cut(s)	7
Hpy188III	TCNNGA	7 cut(s)	107, 173, 274, 308, 497, 812, 818
Hpy8I	GTNNAC	6 cut(s)	91, 240, 630, 706, 727, 844
Hpy99I	CGWCG	2 cut(s)	75, 101
HpyAV	CCTTC	4 cut(s)	55, 89, 403, 459
HpyCH4III	ACNGT	2 cut(s)	71, 835
HpyCH4V	TGCA	3 cut(s)	194, 599, 871
HpyF10VI	GCNNNNNNNGC	3 cut(s)	23, 35, 683
HpyF3I	CTNAG	3 cut(s)	39, 459, 717
HspAI	GCGC	2 cut(s)	36, 677
Kzo9I	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
LmnI	GCTCC	3 cut(s)	34, 364, 486
Lsp1109I	GCAGC	1 cut(s)	13
LweI	GCATC	1 cut(s)	402
MaeI	CTAG	2 cut(s)	140, 323
MaeIII	GTNAC	4 cut(s)	355, 422, 646, 733
MalI	GATC	7 cut(s)	105, 111, 119, 437, 495, 800, 816
MboI	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
MboII	GAAGA	7 cut(s)	70, 172, 188, 227, 252, 341, 617
MflI	RGATCY	1 cut(s)	814
MluCI	AATT	2 cut(s)	247, 777
MlyI	GAGTC	2 cut(s)	227, 780
Mph1103I	ATGCAT	1 cut(s)	196
MroXI	GAANNNNTTC	1 cut(s)	333
MseI	TTAA	2 cut(s)	315, 545
MspA1I	CMGCKG	1 cut(s)	26
MspI	CCGG	1 cut(s)	783
MspR9I	CCNGG	5 cut(s)	369, 590, 763, 771, 783
Mva1269I	GAATGC	1 cut(s)	196
MvaI	CCWGG	4 cut(s)	369, 590, 763, 771
MvnI	CGCG	2 cut(s)	96, 486
MwoI	GCNNNNNNNGC	3 cut(s)	23, 35, 683
NciI	CCSGG	1 cut(s)	783
NdeI	CATATG	1 cut(s)	673
NdeII	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
NlaIV	GGNNCC	3 cut(s)	366, 414, 816
NmuCI	GTSAC	2 cut(s)	355, 646
NsbI	TGCGCA	1 cut(s)	678
NsiI	ATGCAT	1 cut(s)	196
PceI	AGGCCT	1 cut(s)	562
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PctI	GAATGC	1 cut(s)	196
PdmI	GAANNNNTTC	1 cut(s)	333
PfoI	TCCNGGA	1 cut(s)	781
PkrI	GCNGC	1 cut(s)	28
Ple19I	CGATCG	1 cut(s)	112
PleI	GAGTC	2 cut(s)	226, 780
PpsI	GAGTC	2 cut(s)	226, 780
PpuMI	RGGWCCY	1 cut(s)	412
PshAI	GACNNNNGTC	1 cut(s)	69
PsiI	TTATAA	1 cut(s)	636
Psp5II	RGGWCCY	1 cut(s)	412
Psp6I	CCWGG	4 cut(s)	367, 588, 761, 769
PspGI	CCWGG	4 cut(s)	367, 588, 761, 769
PspN4I	GGNNCC	3 cut(s)	366, 414, 816
PspPI	GGNCC	4 cut(s)	209, 371, 412, 773
PspPPI	RGGWCCY	1 cut(s)	412
PstI	CTGCAG	1 cut(s)	873
PsuI	RGATCY	1 cut(s)	814
PvuI	CGATCG	1 cut(s)	112
PvuII	CAGCTG	1 cut(s)	26
RsaI	GTAC	3 cut(s)	92, 575, 694
RsaNI	GTAC	3 cut(s)	91, 574, 693
SaqAI	TTAA	2 cut(s)	315, 545
SatI	GCNGC	1 cut(s)	27
Sau3AI	GATC	7 cut(s)	103, 109, 117, 435, 493, 798, 814
Sau96I	GGNCC	4 cut(s)	209, 371, 412, 773
SchI	GAGTC	2 cut(s)	227, 780
ScrFI	CCNGG	5 cut(s)	369, 590, 763, 771, 783
SfaNI	GCATC	1 cut(s)	402
SfcI	CTRYAG	1 cut(s)	869
SinI	GGWCC	3 cut(s)	371, 412, 773
SmlI	CTYRAG	1 cut(s)	860
SmoI	CTYRAG	1 cut(s)	860
Sse9I	AATT	2 cut(s)	247, 777
SseBI	AGGCCT	1 cut(s)	562
SsiI	CCGC	2 cut(s)	94, 484
SspMI	CTAG	2 cut(s)	140, 323
StuI	AGGCCT	1 cut(s)	562
StyD4I	CCNGG	5 cut(s)	367, 588, 761, 769, 781
StyI	CCWWGG	1 cut(s)	660
TaaI	ACNGT	2 cut(s)	71, 835
TaqI	TCGA	3 cut(s)	108, 188, 234
TasI	AATT	2 cut(s)	247, 777
TatI	WGTACW	1 cut(s)	573
Tru1I	TTAA	2 cut(s)	315, 545
Tru9I	TTAA	2 cut(s)	315, 545
TseFI	GTSAC	2 cut(s)	355, 646
TseI	GCWGC	1 cut(s)	26
Tsp45I	GTSAC	2 cut(s)	355, 646
TspDTI	ATGAA	2 cut(s)	161, 534
TspGWI	ACGGA	1 cut(s)	146
VpaK11BI	GGWCC	3 cut(s)	371, 412, 773
XagI	CCTNNNNNAGG	1 cut(s)	378
XmiI	GTMKAC	1 cut(s)	705
XmnI	GAANNNNTTC	1 cut(s)	333
XspI	CTAG	2 cut(s)	140, 323
Zsp2I	ATGCAT	1 cut(s)	196

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.