Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr10

Orthogroup ID

OG0010721

Physical Location & Seq

Genomic Coordinates Reverse (-)

28300942 .. 28303167

Gene Structure 2226 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom10g27300.7

Sequence Viewer

CDS Protein Promoter (2k)

Length: 879 bp

ATGGCCGAAGCTGAGGGAAAATCCGTCGCTCCAAACGCTGACGTTTTGGAATGGCCGAAGAAGGACAAGCGCCGGTTCCTCCACGCTGTGTACCGCGTCGGCGACCTCGATCGCACCATCAAGTTTTATACGGAGGCTTTGGGGATGAAGCTGTTGAGGAAGAGGGACATCCCGGAGGAGAAATACTCGAATGCGTTTCTGGGGTTTGGGCCCGAAGAGTCTCACTTTGTGGTTGAATTGACCTACAATTATGGAGTTTCTTCTTATGATATCGGCACCGGTTTCGGGCACTTCGCCATCGCTACTCCTGATGTTCAAAAACTGGTTGAAGATGTTCGTGCTAAGGGTGGAACTGTGACGAGGGAGCCTGGACCTGTTAAAGGCGGGAAGAGCATCATTGCCTTCGTGAAGGATCCTGATGGTTACATGTTTGAGATTATTCAGCGACCCTCCACTCCTGAGCCACTTTGCCAAGTAATGCTCCGCGTTGGTGATCTTGAACGCTCAATCAAGTTCTATGAGAAGGCATTAGGGTTGAAGCTGTTGAGGACAATTGACAGGCCCGAATACAAGTACACTATAGCCATTTTGGGATATAAAGAAGAAGACCAAACAACTATCTTGGAGTTGACCTATAACTATGGTGTGACCGAATACACCAAAGGAAATGCGTATGCACAGATTGCTATCGGTACTGATGATGTCTACAAAAGTGCTGAGGCTGTCAATTTGGTTACACAAGAGCTCGGAGGAAAGATAACCAGACAGCCAGGACCGATTCCTGGACTCAACACCAAGATCACCTCTTTTCTCGATCCCGACGGCTGGAAAACTGTCCTGGTTGACAACGAAGATTTCTTGAAGGAACTGCAGCCGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004462 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005777 GO:0005829 GO:0005886 GO:0006081 GO:0006082 GO:0006089 GO:0006950 GO:0006970 GO:0006979 GO:0008150 GO:0008152 GO:0009056 GO:0009438 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009651 GO:0009941 GO:0009987 GO:0010035 GO:0010038 GO:0016020 GO:0016151 GO:0016829 GO:0016846 GO:0019243 GO:0019752 GO:0019863 GO:0019865 GO:0031967 GO:0031975 GO:0032787 GO:0042180 GO:0042182 GO:0042221 GO:0042579 GO:0043167 GO:0043169 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043436 GO:0044237 GO:0044248 GO:0044281 GO:0044282 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046185 GO:0046686 GO:0046872 GO:0046914 GO:0050896 GO:0051596 GO:0061727 GO:0071704 GO:0071944 GO:1901575 GO:1901615

KEGG Pathways

Metabolic & Signaling

ko00620 map00620

Pfam Domains

Protein Families

Glyoxalase

Protein Analysis

293

Amino Acids

32.76

Weight (kDa)

5.48

Isoelectric Point (pI)

29.83

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010721)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G11840 AT1G11840 AT1G11840 AT1G11840 AT1G11840 AT1G11840
fragaria_vesca	FvH4_3g01920
malus_domestica	MD05G1348100.v1.1
prunus_persica	Prupe.4G019400_v2.0.a1
pyrus_communis	pycom05g31560 pycom10g27300
rosa_chinensis	RchiOBHm_Chr5g0002821
rosa_laevigata	RLG00000031062
rosa_multiflora	Rmu_co8395511.1_g000001 Rmu_sc0013603.1_g000013
rosa_roxburghii	Rroxscaffold_1G00073030
rosa_rugosa	Rorug04G0399900
rosa_samantha	Rh5BG025400 Rh5DG023900
rosa_wichuraiana	Rw5G002110

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	275
AccI	GTMKAC	1 cut(s)	705
AccII	CGCG	2 cut(s)	96, 486
AciI	CCGC	3 cut(s)	94, 384, 484
AclWI	GGATC	3 cut(s)	407, 420, 809
AcoI	YGGCCR	2 cut(s)	3, 53
AdeI	CACNNNGTG	2 cut(s)	88, 229
AfaI	GTAC	3 cut(s)	92, 575, 694
AfiI	CCNNNNNNNGG	4 cut(s)	285, 380, 782, 825
AflIII	ACRYGT	1 cut(s)	426
AgeI	ACCGGT	1 cut(s)	278
AgsI	TTSAA	6 cut(s)	236, 317, 329, 500, 538, 862
AjnI	CCWGG	4 cut(s)	367, 769, 781, 837
AluBI	AGCT	4 cut(s)	11, 151, 541, 745
AluI	AGCT	4 cut(s)	11, 151, 541, 745
Alw21I	GWGCWC	1 cut(s)	747
Alw26I	GTCTC	1 cut(s)	225
AlwI	GGATC	3 cut(s)	407, 420, 809
AoxI	GGCC	4 cut(s)	3, 53, 209, 560
ApaI	GGGCCC	1 cut(s)	213
ApeKI	GCWGC	1 cut(s)	871
AsiGI	ACCGGT	1 cut(s)	278
Asp700I	GAANNNNTTC	1 cut(s)	333
AspLEI	GCGC	1 cut(s)	72
AspS9I	GGNCC	5 cut(s)	209, 210, 371, 561, 773
AsuC2I	CCSGG	1 cut(s)	173
AsuHPI	GGTGA	2 cut(s)	503, 793
AvaII	GGWCC	2 cut(s)	371, 773
BaeGI	GKGCMC	2 cut(s)	213, 291
BamHI	GGATCC	1 cut(s)	412
BanI	GGYRCC	1 cut(s)	275
BanII	GRGCYC	2 cut(s)	213, 747
BbsI	GAAGAC	1 cut(s)	612
Bbv12I	GWGCWC	1 cut(s)	747
BbvCI	CCTCAGC	2 cut(s)	12, 717
BccI	CCATC	3 cut(s)	125, 305, 413
BceAI	ACGGC	2 cut(s)	838, 859
BcgI	CGANNNNNNTGC	2 cut(s)	265, 299
BciT130I	CCWGG	4 cut(s)	369, 771, 783, 839
BcnI	CCSGG	1 cut(s)	173
BcoDI	GTCTC	1 cut(s)	225
BfmI	CTRYAG	2 cut(s)	579, 869
BfoI	RGCGCY	1 cut(s)	73
BisI	GCNGC	1 cut(s)	872
BlsI	GCNGC	1 cut(s)	873
Bme1390I	CCNGG	5 cut(s)	173, 369, 771, 783, 839
Bme18I	GGWCC	2 cut(s)	371, 773
BmgT120I	GGNCC	5 cut(s)	209, 210, 371, 561, 773
BmiI	GGNNCC	5 cut(s)	77, 211, 277, 366, 414
BmrFI	CCNGG	5 cut(s)	173, 369, 771, 783, 839
BmsI	GCATC	1 cut(s)	402
BpiI	GAAGAC	1 cut(s)	612
BplI	GAGNNNNNCTC	2 cut(s)	170, 202
Bpu10I	CCTNAGC	4 cut(s)	12, 342, 459, 717
BpuMI	CCSGG	1 cut(s)	173
BsaBI	GATNNNNATC	1 cut(s)	686
BsaWI	WCCGGW	1 cut(s)	278
Bsc4I	CCNNNNNNNGG	4 cut(s)	285, 380, 782, 825
Bse118I	RCCGGY	2 cut(s)	72, 278
Bse1I	ACTGG	1 cut(s)	327
Bse3DI	GCAATG	1 cut(s)	396
Bse8I	GATNNNNATC	1 cut(s)	686
BseBI	CCWGG	4 cut(s)	369, 771, 783, 839
BseGI	GGATG	2 cut(s)	150, 168
BseJI	GATNNNNATC	1 cut(s)	686
BseLI	CCNNNNNNNGG	4 cut(s)	285, 380, 782, 825
BseMI	GCAATG	1 cut(s)	396
BseMII	CTCAG	2 cut(s)	450, 708
BseNI	ACTGG	1 cut(s)	327
BseRI	GAGGAG	1 cut(s)	191
BseSI	GKGCMC	2 cut(s)	213, 291
Bsh1236I	CGCG	2 cut(s)	96, 486
Bsh1285I	CGRYCG	1 cut(s)	112
BshFI	GGCC	4 cut(s)	5, 55, 211, 562
BshNI	GGYRCC	1 cut(s)	275
BshTI	ACCGGT	1 cut(s)	278
BsiEI	CGRYCG	1 cut(s)	112
BsiHKAI	GWGCWC	1 cut(s)	747
BsiSI	CCGG	3 cut(s)	73, 173, 279
BslFI	GGGAC	1 cut(s)	179
BslI	CCNNNNNNNGG	4 cut(s)	285, 380, 782, 825
BsmAI	GTCTC	1 cut(s)	225
BsmFI	GGGAC	1 cut(s)	179
BsmI	GAATGC	1 cut(s)	196
BsnI	GGCC	4 cut(s)	5, 55, 211, 562
Bsp120I	GGGCCC	1 cut(s)	209
Bsp1286I	GDGCHC	3 cut(s)	213, 291, 747
Bsp143I	GATC	5 cut(s)	109, 412, 493, 798, 814
BspACI	CCGC	3 cut(s)	94, 384, 484
BspANI	GGCC	4 cut(s)	5, 55, 211, 562
BspCNI	CTCAG	3 cut(s)	4, 451, 709
BspFNI	CGCG	2 cut(s)	96, 486
BspLI	GGNNCC	5 cut(s)	77, 211, 277, 366, 414
BspMAI	CTGCAG	1 cut(s)	873
BspPI	GGATC	3 cut(s)	407, 420, 809
BspQI	GCTCTTC	1 cut(s)	383
BspT107I	GGYRCC	1 cut(s)	275
BsrDI	GCAATG	1 cut(s)	396
BsrFI	RCCGGY	2 cut(s)	72, 278
BsrI	ACTGG	1 cut(s)	327
BssAI	RCCGGY	2 cut(s)	72, 278
BssMI	GATC	5 cut(s)	109, 412, 493, 798, 814
Bst2UI	CCWGG	4 cut(s)	369, 771, 783, 839
Bst4CI	ACNGT	2 cut(s)	355, 835
Bst6I	CTCTTC	3 cut(s)	155, 210, 383
BstAPI	GCANNNNNTGC	1 cut(s)	683
BstDEI	CTNAG	4 cut(s)	12, 342, 459, 717
BstENI	CCTNNNNNAGG	1 cut(s)	378
BstF5I	GGATG	2 cut(s)	150, 168
BstFNI	CGCG	2 cut(s)	96, 486
BstH2I	RGCGCY	1 cut(s)	73
BstHHI	GCGC	1 cut(s)	72
BstKTI	GATC	5 cut(s)	112, 415, 496, 801, 817
BstMAI	GTCTC	1 cut(s)	225
BstMBI	GATC	5 cut(s)	109, 412, 493, 798, 814
BstMCI	CGRYCG	1 cut(s)	112
BstMWI	GCNNNNNNNGC	3 cut(s)	35, 390, 683
BstNI	CCWGG	4 cut(s)	369, 771, 783, 839
BstNSI	RCATGY	1 cut(s)	430
BstSCI	CCNGG	5 cut(s)	171, 367, 769, 781, 837
BstSFI	CTRYAG	2 cut(s)	579, 869
BstSLI	GKGCMC	2 cut(s)	213, 291
BstUI	CGCG	2 cut(s)	96, 486
BstV2I	GAAGAC	1 cut(s)	612
BstX2I	RGATCY	1 cut(s)	412
BstYI	RGATCY	1 cut(s)	412
BsuRI	GGCC	4 cut(s)	5, 55, 211, 562
BtgZI	GCGATG	1 cut(s)	283
BtsCI	GGATG	2 cut(s)	150, 168
CfoI	GCGC	1 cut(s)	72
Cfr10I	RCCGGY	2 cut(s)	72, 278
Cfr13I	GGNCC	5 cut(s)	209, 210, 371, 561, 773
CseI	GACGC	1 cut(s)	85
Csp6I	GTAC	3 cut(s)	91, 574, 693
CspAI	ACCGGT	1 cut(s)	278
CviAII	CATG	1 cut(s)	427
CviQI	GTAC	3 cut(s)	91, 574, 693
DdeI	CTNAG	4 cut(s)	12, 342, 459, 717
DpnI	GATC	5 cut(s)	111, 414, 495, 800, 816
DpnII	GATC	5 cut(s)	109, 412, 493, 798, 814
DraIII	CACNNNGTG	2 cut(s)	88, 229
EaeI	YGGCCR	2 cut(s)	3, 53
Eam1104I	CTCTTC	3 cut(s)	155, 210, 383
EarI	CTCTTC	3 cut(s)	155, 210, 383
Ecl136II	GAGCTC	1 cut(s)	745
Eco24I	GRGCYC	2 cut(s)	213, 747
Eco32I	GATATC	1 cut(s)	271
Eco47I	GGWCC	2 cut(s)	371, 773
Eco53kI	GAGCTC	1 cut(s)	745
EcoICRI	GAGCTC	1 cut(s)	745
EcoNI	CCTNNNNNAGG	1 cut(s)	378
EcoRII	CCWGG	4 cut(s)	367, 769, 781, 837
EcoRV	GATATC	1 cut(s)	271
EcoT38I	GRGCYC	2 cut(s)	213, 747
FaeI	CATG	1 cut(s)	430
FaqI	GGGAC	1 cut(s)	179
FatI	CATG	1 cut(s)	426
FauI	CCCGC	1 cut(s)	377
FblI	GTMKAC	1 cut(s)	705
Fnu4HI	GCNGC	1 cut(s)	872
FokI	GGATG	2 cut(s)	155, 157
FriOI	GRGCYC	2 cut(s)	213, 747
Fsp4HI	GCNGC	1 cut(s)	872
GlaI	GCGC	1 cut(s)	71
GluI	GCNGC	1 cut(s)	872
HaeII	RGCGCY	1 cut(s)	73
HaeIII	GGCC	4 cut(s)	5, 55, 211, 562
HapII	CCGG	3 cut(s)	73, 173, 279
HgaI	GACGC	1 cut(s)	85
HhaI	GCGC	1 cut(s)	72
Hin1II	CATG	1 cut(s)	430
Hin6I	GCGC	1 cut(s)	70
HinP1I	GCGC	1 cut(s)	70
HincII	GTYRAC	2 cut(s)	630, 844
HindII	GTYRAC	2 cut(s)	630, 844
HinfI	GANTC	3 cut(s)	218, 778, 786
HpaII	CCGG	3 cut(s)	73, 173, 279
HphI	GGTGA	2 cut(s)	503, 793
Hpy166II	GTNNAC	5 cut(s)	91, 576, 630, 706, 844
Hpy188I	TCNGA	1 cut(s)	749
Hpy188III	TCNNGA	8 cut(s)	308, 406, 416, 458, 497, 812, 818, 859
Hpy8I	GTNNAC	5 cut(s)	91, 576, 630, 706, 844
Hpy99I	CGWCG	3 cut(s)	29, 101, 824
HpyAV	CCTTC	5 cut(s)	55, 403, 412, 517, 856
HpyCH4III	ACNGT	2 cut(s)	355, 835
HpyCH4IV	ACGT	1 cut(s)	42
HpyCH4V	TGCA	2 cut(s)	677, 871
HpyF10VI	GCNNNNNNNGC	3 cut(s)	35, 390, 683
HpyF3I	CTNAG	4 cut(s)	12, 342, 459, 717
HpySE526I	ACGT	1 cut(s)	42
Hsp92II	CATG	1 cut(s)	430
HspAI	GCGC	1 cut(s)	70
Kzo9I	GATC	5 cut(s)	109, 412, 493, 798, 814
LguI	GCTCTTC	1 cut(s)	383
LmnI	GCTCC	3 cut(s)	34, 364, 486
LweI	GCATC	1 cut(s)	402
MaeII	ACGT	1 cut(s)	42
MaeIII	GTNAC	4 cut(s)	355, 422, 646, 733
MalI	GATC	5 cut(s)	111, 414, 495, 800, 816
MboI	GATC	5 cut(s)	109, 412, 493, 798, 814
MboII	GAAGA	9 cut(s)	70, 172, 227, 252, 341, 400, 614, 617, 863
MfeI	CAATTG	1 cut(s)	552
MflI	RGATCY	1 cut(s)	412
MhlI	GDGCHC	3 cut(s)	213, 291, 747
MluCI	AATT	4 cut(s)	236, 247, 552, 727
MlyI	GAGTC	2 cut(s)	227, 780
MroXI	GAANNNNTTC	1 cut(s)	333
MseI	TTAA	1 cut(s)	378
MspI	CCGG	3 cut(s)	73, 173, 279
MspR9I	CCNGG	5 cut(s)	173, 369, 771, 783, 839
MunI	CAATTG	1 cut(s)	552
Mva1269I	GAATGC	1 cut(s)	196
MvaI	CCWGG	4 cut(s)	369, 771, 783, 839
MvnI	CGCG	2 cut(s)	96, 486
MwoI	GCNNNNNNNGC	3 cut(s)	35, 390, 683
NciI	CCSGG	1 cut(s)	173
NdeII	GATC	5 cut(s)	109, 412, 493, 798, 814
NlaIII	CATG	1 cut(s)	430
NlaIV	GGNNCC	5 cut(s)	77, 211, 277, 366, 414
NmuCI	GTSAC	2 cut(s)	355, 646
NspI	RCATGY	1 cut(s)	430
PciI	ACATGT	1 cut(s)	426
PciSI	GCTCTTC	1 cut(s)	383
PcsI	WCGNNNNNNNCGW	1 cut(s)	105
PctI	GAATGC	1 cut(s)	196
PdmI	GAANNNNTTC	1 cut(s)	333
PfeI	GAWTC	1 cut(s)	778
PfoI	TCCNGGA	2 cut(s)	171, 781
PinAI	ACCGGT	1 cut(s)	278
PkrI	GCNGC	1 cut(s)	873
Ple19I	CGATCG	1 cut(s)	112
PleI	GAGTC	2 cut(s)	226, 780
PpsI	GAGTC	2 cut(s)	226, 780
PscI	ACATGT	1 cut(s)	426
Psp124BI	GAGCTC	1 cut(s)	747
Psp6I	CCWGG	4 cut(s)	367, 769, 781, 837
PspGI	CCWGG	4 cut(s)	367, 769, 781, 837
PspN4I	GGNNCC	5 cut(s)	77, 211, 277, 366, 414
PspOMI	GGGCCC	1 cut(s)	209
PspPI	GGNCC	5 cut(s)	209, 210, 371, 561, 773
PstI	CTGCAG	1 cut(s)	873
PsuI	RGATCY	1 cut(s)	412
PvuI	CGATCG	1 cut(s)	112
RsaI	GTAC	3 cut(s)	92, 575, 694
RsaNI	GTAC	3 cut(s)	91, 574, 693
SacI	GAGCTC	1 cut(s)	747
SapI	GCTCTTC	1 cut(s)	383
SaqAI	TTAA	1 cut(s)	378
SatI	GCNGC	1 cut(s)	872
Sau3AI	GATC	5 cut(s)	109, 412, 493, 798, 814
Sau96I	GGNCC	5 cut(s)	209, 210, 371, 561, 773
SchI	GAGTC	2 cut(s)	227, 780
ScrFI	CCNGG	5 cut(s)	173, 369, 771, 783, 839
SduI	GDGCHC	3 cut(s)	213, 291, 747
SfaNI	GCATC	1 cut(s)	402
SfcI	CTRYAG	2 cut(s)	579, 869
SinI	GGWCC	2 cut(s)	371, 773
Sse9I	AATT	4 cut(s)	236, 247, 552, 727
SsiI	CCGC	3 cut(s)	94, 384, 484
SstI	GAGCTC	1 cut(s)	747
StyD4I	CCNGG	5 cut(s)	171, 367, 769, 781, 837
TaaI	ACNGT	2 cut(s)	355, 835
TaiI	ACGT	1 cut(s)	45
TaqI	TCGA	3 cut(s)	108, 188, 813
TaqII	GACCGA	2 cut(s)	665, 790
TasI	AATT	4 cut(s)	236, 247, 552, 727
TatI	WGTACW	1 cut(s)	573
TfiI	GAWTC	1 cut(s)	778
Tru1I	TTAA	1 cut(s)	378
Tru9I	TTAA	1 cut(s)	378
TseFI	GTSAC	2 cut(s)	355, 646
TseI	GCWGC	1 cut(s)	871
Tsp45I	GTSAC	2 cut(s)	355, 646
TspDTI	ATGAA	1 cut(s)	161
TspGWI	ACGGA	2 cut(s)	13, 146
VpaK11BI	GGWCC	2 cut(s)	371, 773
XagI	CCTNNNNNAGG	1 cut(s)	378
XceI	RCATGY	1 cut(s)	430
XmiI	GTMKAC	1 cut(s)	705
XmnI	GAANNNNTTC	1 cut(s)	333

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.