Prupe.4G095300_v2.0.a1

Tubulin is the major constituent of microtubules. It binds two moles of GTP, one at an exchangeable site on the beta chain and one at a non-exchangeable site on the alpha chain

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Reverse (-)
4791688 .. 4793942
2255 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G095300.1

Sequence Viewer

Length: 1335 bp
ATGAGAGAAATTCTTCACATCCAGGGCGGCCAATGTGGGAACCAGATTGGGGCCAAGTTCTGGGAAGTGATCTGCGACGAGCACGGCATAGACAGCACCGGGAGGTACAACGGCGACTCTGAGCTCCAGCTAGAGAGAATCAATGTCTATTACAACGAGGCCAGTGGCGGAAGGTTCGTTCCACGGGCGGTCCTTATGGATCTGGAGCCTGGGACCATGGACTCGGTACGATCCGGCCCGTTTGGCCAGATATTCAGACCCGATAACTTCGTCTTCGGGCAGTCTGGGGCTGGAAACAACTGGGCTAAGGGGCATTATACGGAGGGTGCCGAACTTATTGATTCTGTGCTTGACGTGGTGCGCAAAGAGGCCGAGAACTGCGATTGCTTACAGGGATTCCAAGTTTGTCATTCTTTGGGTGGTGGCACTGGCTCTGGCATGGGAACTCTTCTTATTTCCAAGATCAGGGAAGAGTACCCAGATCGGATGATGATGACATTTTCTGTTTTCCCATCTCCGAAGGTGTCGGATACAGTTGTTGAGCCATACAATGCTACCCTTTCCGTGCATCAGCTTGTCGAAAATGCCGATGAATGTATGGTTTTGGACAACGAGGCTCTGTATGACATCTGCTTCCGCACTCTCAAGCTTGCCACCCCTACTTTTGGTGACCTTAACCACCTCATCTCTGCCACCATGAGCGGTGTCACATGTTGTCTTCGGTTTCCTGGACAGTTGAACTCTGACCTTAGGAAGCTCGCAGTTAACCTTATCCCTTTCCCACGGCTGCACTTCTTTATGGTTGGGTTTGCTCCTCTAACTTCAAGAGGATCACAGCAGTACAGTGCTCTGACTGTGCCTGAATTGACCCAGCAGATGTGGGATGCCAAAAACATGATGTGCGCAGCTGACCCACGCCATGGACGTTACCTTACTGCTTCTGCCATGTTCCGTGGTAAGATGAGCACCAAGGAAGTTGATGAACAAATGATTAACGTCCAGAACAAGAACTCCTCATACTTTGTTGAGTGGATTCCCAATAATGTTAAGTCCAGTGTGTGTGACATTCCACCCAAGGGTCTGAAGATGGCGTCCACTTTTATGGGGAATTCGACTTCTATTCAGGAAATGTTCAGGAGGGTTAGCGAGCAGTTCACAGCTATGTTCAGGCGCAAGGCTTTCTTGCATTGGTACACTGGCGAGGGAATGGATGAGATGGAGTTCACCGAGGCCGAGAGTAACATGAATGATCTGGTGGCTGAGTACCAGCAATACCAGGATGCAACAGTGGAGGAGGAAGAGTACGAGGAGGAGGAAGAGGAGCTTGGTGCTTGA
Functional Annotation

Protein Analysis

445

Amino Acids

49.89

Weight (kDa)

4.76

Isoelectric Point (pI)

41.44

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 2 cut(s) 362, 904
AccB1I GGYRCC 1 cut(s) 326
AccB7I CCANNNNNTGG 2 cut(s) 60, 920
AccBSI CCGCTC 1 cut(s) 702
AciI CCGC 5 cut(s) 27, 168, 188, 637, 702
AclWI GGATC 3 cut(s) 207, 225, 838
AcoI YGGCCR 2 cut(s) 28, 244
AcsI RAATTY 2 cut(s) 9, 1108
AcuI CTGAAG 1 cut(s) 1103
AcyI GRCGYC 1 cut(s) 1091
AfaI GTAC 7 cut(s) 107, 228, 476, 842, 1193, 1265, 1304
AfiI CCNNNNNNNGG 6 cut(s) 49, 60, 465, 665, 920, 1076
AflIII ACRYGT 1 cut(s) 710
AgsI TTSAA 2 cut(s) 739, 825
AjiI CACGTC 1 cut(s) 355
AjnI CCWGG 4 cut(s) 21, 208, 727, 1275
AjuI GAANNNNNNNTTGG 1 cut(s) 1308
AloI GAACNNNNNNTCC 4 cut(s) 162, 194, 995, 1027
AluBI AGCT 8 cut(s) 124, 130, 574, 649, 757, 908, 1160, 1324
AluI AGCT 8 cut(s) 124, 130, 574, 649, 757, 908, 1160, 1324
Alw21I GWGCWC 4 cut(s) 84, 126, 850, 968
AlwI GGATC 3 cut(s) 207, 225, 838
AoxI GGCC 7 cut(s) 28, 51, 159, 235, 244, 369, 1230
ApeKI GCWGC 2 cut(s) 787, 905
ApoI RAATTY 2 cut(s) 9, 1108
Asp700I GAANNNNTTC 1 cut(s) 12
AspLEI GCGC 3 cut(s) 363, 905, 1173
AspS9I GGNCC 4 cut(s) 51, 190, 213, 236
AsuC2I CCSGG 1 cut(s) 100
AsuHPI GGTGA 2 cut(s) 680, 1216
AvaII GGWCC 2 cut(s) 190, 213
AxyI CCTNAGG 1 cut(s) 749
BaeI ACNNNNGTAYC 2 cut(s) 522, 555
BalI TGGCCA 1 cut(s) 246
BanI GGYRCC 1 cut(s) 326
BanII GRGCYC 1 cut(s) 126
BbsI GAAGAC 2 cut(s) 265, 710
Bbv12I GWGCWC 4 cut(s) 84, 126, 850, 968
BbvI GCAGC 2 cut(s) 774, 917
BccI CCATC 3 cut(s) 520, 1081, 1210
BceAI ACGGC 3 cut(s) 100, 127, 800
BciT130I CCWGG 4 cut(s) 23, 210, 729, 1277
BciVI GTATCC 1 cut(s) 523
BcnI CCSGG 1 cut(s) 100
BfaI CTAG 1 cut(s) 131
BfuI GTATCC 1 cut(s) 523
BglI GCCNNNNNGGC 1 cut(s) 243
BisI GCNGC 3 cut(s) 28, 788, 906
BlsI GCNGC 3 cut(s) 29, 789, 907
Bme1390I CCNGG 5 cut(s) 23, 100, 210, 729, 1277
Bme18I GGWCC 2 cut(s) 190, 213
BmgBI CACGTC 1 cut(s) 355
BmgT120I GGNCC 4 cut(s) 51, 190, 213, 236
BmiI GGNNCC 5 cut(s) 41, 52, 207, 214, 328
BmrFI CCNGG 5 cut(s) 23, 100, 210, 729, 1277
BmrI ACTGGG 1 cut(s) 310
BmsI GCATC 3 cut(s) 577, 874, 1270
BmuI ACTGGG 1 cut(s) 310
BpiI GAAGAC 2 cut(s) 265, 710
BpmI CTGGAG 2 cut(s) 110, 224
Bpu10I CCTNAGC 1 cut(s) 306
BpuEI CTTGAG 1 cut(s) 629
BpuMI CCSGG 1 cut(s) 100
BsaHI GRCGYC 1 cut(s) 1091
BsaXI ACNNNNNCTCC 4 cut(s) 995, 1025, 1286, 1316
Bsc4I CCNNNNNNNGG 6 cut(s) 49, 60, 465, 665, 920, 1076
Bse1I ACTGG 5 cut(s) 162, 305, 433, 1053, 1201
Bse21I CCTNAGG 1 cut(s) 749
BseBI CCWGG 4 cut(s) 23, 210, 729, 1277
BseGI GGATG 5 cut(s) 18, 492, 889, 1216, 1285
BseLI CCNNNNNNNGG 6 cut(s) 49, 60, 465, 665, 920, 1076
BseMII CTCAG 2 cut(s) 111, 1251
BseNI ACTGG 5 cut(s) 162, 305, 433, 1053, 1201
BseRI GAGGAG 6 cut(s) 804, 1003, 1307, 1322, 1325, 1334
BseXI GCAGC 2 cut(s) 774, 917
BseYI CCCAGC 1 cut(s) 870
BsgI GTGCAG 1 cut(s) 773
BshFI GGCC 7 cut(s) 30, 53, 161, 237, 246, 371, 1232
BshNI GGYRCC 1 cut(s) 326
BsiHKAI GWGCWC 4 cut(s) 84, 126, 850, 968
BsiSI CCGG 2 cut(s) 99, 234
BslFI GGGAC 1 cut(s) 226
BslI CCNNNNNNNGG 6 cut(s) 49, 60, 465, 665, 920, 1076
BsmFI GGGAC 1 cut(s) 226
BsnI GGCC 7 cut(s) 30, 53, 161, 237, 246, 371, 1232
Bsp1286I GDGCHC 4 cut(s) 84, 126, 850, 968
Bsp143I GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
Bsp19I CCATGG 2 cut(s) 216, 919
BspACI CCGC 5 cut(s) 27, 168, 188, 637, 702
BspANI GGCC 7 cut(s) 30, 53, 161, 237, 246, 371, 1232
BspCNI CTCAG 2 cut(s) 112, 1252
BspLI GGNNCC 5 cut(s) 41, 52, 207, 214, 328
BspPI GGATC 3 cut(s) 207, 225, 838
BspT107I GGYRCC 1 cut(s) 326
BsrBI CCGCTC 1 cut(s) 702
BsrI ACTGG 5 cut(s) 162, 305, 433, 1053, 1201
BssMI GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
BssNI GRCGYC 1 cut(s) 1091
BssT1I CCWWGG 4 cut(s) 216, 919, 969, 1074
Bst2UI CCWGG 4 cut(s) 23, 210, 729, 1277
Bst4CI ACNGT 5 cut(s) 535, 735, 845, 856, 1288
Bst6I CTCTTC 4 cut(s) 453, 465, 1293, 1311
BstACI GRCGYC 1 cut(s) 1091
BstC8I GCNNGC 3 cut(s) 651, 759, 1148
BstDEI CTNAG 4 cut(s) 120, 306, 749, 1260
BstDSI CCRYGG 5 cut(s) 182, 216, 782, 919, 952
BstEII GGTNACC 1 cut(s) 668
BstF5I GGATG 5 cut(s) 18, 492, 889, 1216, 1285
BstHHI GCGC 3 cut(s) 363, 905, 1173
BstKTI GATC 7 cut(s) 72, 202, 233, 465, 484, 833, 1252
BstMBI GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
BstMWI GCNNNNNNNGC 2 cut(s) 93, 243
BstNI CCWGG 4 cut(s) 23, 210, 729, 1277
BstNSI RCATGY 1 cut(s) 714
BstPI GGTNACC 1 cut(s) 668
BstSCI CCNGG 5 cut(s) 21, 98, 208, 727, 1275
BstV1I GCAGC 2 cut(s) 774, 917
BstV2I GAAGAC 2 cut(s) 265, 710
BstX2I RGATCY 1 cut(s) 199
BstXI CCANNNNNNTGG 1 cut(s) 1102
BstYI RGATCY 1 cut(s) 199
Bsu36I CCTNAGG 1 cut(s) 749
BsuI GTATCC 1 cut(s) 523
BsuRI GGCC 7 cut(s) 30, 53, 161, 237, 246, 371, 1232
BtgI CCRYGG 5 cut(s) 182, 216, 782, 919, 952
BtrI CACGTC 1 cut(s) 355
BtsCI GGATG 5 cut(s) 18, 492, 889, 1216, 1285
BtsIMutI CAGTG 6 cut(s) 169, 426, 850, 1060, 1194, 1293
Cac8I GCNNGC 3 cut(s) 651, 759, 1148
CfoI GCGC 3 cut(s) 363, 905, 1173
Cfr13I GGNCC 4 cut(s) 51, 190, 213, 236
CseI GACGC 1 cut(s) 1080
Csp6I GTAC 7 cut(s) 106, 227, 475, 841, 1192, 1264, 1303
CviAII CATG 8 cut(s) 217, 439, 697, 711, 895, 920, 946, 1243
CviQI GTAC 7 cut(s) 106, 227, 475, 841, 1192, 1264, 1303
DdeI CTNAG 4 cut(s) 120, 306, 749, 1260
DpnI GATC 7 cut(s) 71, 201, 232, 464, 483, 832, 1251
DpnII GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
EaeI YGGCCR 2 cut(s) 28, 244
Eam1104I CTCTTC 4 cut(s) 453, 465, 1293, 1311
EarI CTCTTC 4 cut(s) 453, 465, 1293, 1311
EciI GGCGGA 1 cut(s) 183
Ecl136II GAGCTC 1 cut(s) 124
Eco130I CCWWGG 4 cut(s) 216, 919, 969, 1074
Eco24I GRGCYC 1 cut(s) 126
Eco47I GGWCC 2 cut(s) 190, 213
Eco53kI GAGCTC 1 cut(s) 124
Eco57I CTGAAG 1 cut(s) 1103
Eco81I CCTNAGG 1 cut(s) 749
Eco91I GGTNACC 1 cut(s) 668
EcoICRI GAGCTC 1 cut(s) 124
EcoO65I GGTNACC 1 cut(s) 668
EcoRI GAATTC 1 cut(s) 1108
EcoRII CCWGG 4 cut(s) 21, 208, 727, 1275
EcoT14I CCWWGG 4 cut(s) 216, 919, 969, 1074
EcoT38I GRGCYC 1 cut(s) 126
ErhI CCWWGG 4 cut(s) 216, 919, 969, 1074
FaeI CATG 8 cut(s) 220, 442, 700, 714, 898, 923, 949, 1246
FalI AAGNNNNNCTT 3 cut(s) 1166, 1198, 1308
FaqI GGGAC 1 cut(s) 226
FatI CATG 8 cut(s) 216, 438, 696, 710, 894, 919, 945, 1242
Fnu4HI GCNGC 3 cut(s) 28, 788, 906
FokI GGATG 5 cut(s) 5, 499, 896, 1223, 1292
FriOI GRGCYC 1 cut(s) 126
Fsp4HI GCNGC 3 cut(s) 28, 788, 906
FspBI CTAG 1 cut(s) 131
FspI TGCGCA 2 cut(s) 362, 904
GlaI GCGC 3 cut(s) 362, 904, 1172
GluI GCNGC 3 cut(s) 28, 788, 906
GsaI CCCAGC 1 cut(s) 874
GsuI CTGGAG 2 cut(s) 110, 224
HaeIII GGCC 7 cut(s) 30, 53, 161, 237, 246, 371, 1232
HapII CCGG 2 cut(s) 99, 234
HgaI GACGC 1 cut(s) 1080
HhaI GCGC 3 cut(s) 363, 905, 1173
Hin1I GRCGYC 1 cut(s) 1091
Hin1II CATG 8 cut(s) 220, 442, 700, 714, 898, 923, 949, 1246
Hin6I GCGC 3 cut(s) 361, 903, 1171
HinP1I GCGC 3 cut(s) 361, 903, 1171
HincII GTYRAC 1 cut(s) 766
HindII GTYRAC 1 cut(s) 766
HindIII AAGCTT 1 cut(s) 647
HinfI GANTC 6 cut(s) 116, 138, 221, 341, 396, 1033
HpaI GTTAAC 1 cut(s) 766
HpaII CCGG 2 cut(s) 99, 234
HphI GGTGA 2 cut(s) 680, 1216
Hpy166II GTNNAC 5 cut(s) 766, 1095, 1155, 1194, 1224
Hpy188I TCNGA 8 cut(s) 121, 257, 486, 519, 529, 745, 852, 1083
Hpy188III TCNNGA 5 cut(s) 203, 825, 1000, 1124, 1135
Hpy8I GTNNAC 5 cut(s) 766, 1095, 1155, 1194, 1224
Hpy99I CGWCG 1 cut(s) 80
HpyAV CCTTC 2 cut(s) 165, 514
HpyCH4III ACNGT 5 cut(s) 535, 735, 845, 856, 1288
HpyCH4IV ACGT 3 cut(s) 354, 925, 996
HpyCH4V TGCA 4 cut(s) 568, 790, 1186, 1283
HpyF10VI GCNNNNNNNGC 2 cut(s) 93, 243
HpyF3I CTNAG 4 cut(s) 120, 306, 749, 1260
HpySE526I ACGT 3 cut(s) 354, 925, 996
Hsp92I GRCGYC 1 cut(s) 1091
Hsp92II CATG 8 cut(s) 220, 442, 700, 714, 898, 923, 949, 1246
HspAI GCGC 3 cut(s) 361, 903, 1171
KspAI GTTAAC 1 cut(s) 766
Kzo9I GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
LmnI GCTCC 4 cut(s) 129, 205, 817, 1321
Lsp1109I GCAGC 2 cut(s) 774, 917
LweI GCATC 3 cut(s) 577, 874, 1270
MaeI CTAG 1 cut(s) 131
MaeII ACGT 3 cut(s) 354, 925, 996
MaeIII GTNAC 5 cut(s) 668, 706, 926, 1061, 1238
MalI GATC 7 cut(s) 71, 201, 232, 464, 483, 832, 1251
MbiI CCGCTC 1 cut(s) 702
MboI GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
MboII GAAGA 8 cut(s) 5, 265, 440, 482, 710, 1096, 1310, 1328
MflI RGATCY 1 cut(s) 199
MhlI GDGCHC 4 cut(s) 84, 126, 850, 968
MlsI TGGCCA 1 cut(s) 246
MluCI AATT 3 cut(s) 9, 863, 1108
MluNI TGGCCA 1 cut(s) 246
MlyI GAGTC 2 cut(s) 110, 215
MmeI TCCRAC 1 cut(s) 507
Mox20I TGGCCA 1 cut(s) 246
MroXI GAANNNNTTC 1 cut(s) 12
MscI TGGCCA 1 cut(s) 246
MseI TTAA 4 cut(s) 675, 765, 993, 1047
MslI CAYNNNNRTG 2 cut(s) 1100, 1160
Msp20I TGGCCA 1 cut(s) 246
MspA1I CMGCKG 1 cut(s) 908
MspI CCGG 2 cut(s) 99, 234
MspR9I CCNGG 5 cut(s) 23, 100, 210, 729, 1277
MvaI CCWGG 4 cut(s) 23, 210, 729, 1277
MwoI GCNNNNNNNGC 2 cut(s) 93, 243
NciI CCSGG 1 cut(s) 100
NcoI CCATGG 2 cut(s) 216, 919
NdeII GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
NlaIII CATG 8 cut(s) 220, 442, 700, 714, 898, 923, 949, 1246
NlaIV GGNNCC 5 cut(s) 41, 52, 207, 214, 328
NmeAIII GCCGAG 2 cut(s) 397, 1258
NmuCI GTSAC 3 cut(s) 668, 706, 1061
NsbI TGCGCA 2 cut(s) 362, 904
NspI RCATGY 1 cut(s) 714
PciI ACATGT 1 cut(s) 710
PcsI WCGNNNNNNNCGW 2 cut(s) 585, 922
PdmI GAANNNNTTC 1 cut(s) 12
PfeI GAWTC 4 cut(s) 138, 341, 396, 1033
PflMI CCANNNNNTGG 2 cut(s) 60, 920
PfoI TCCNGGA 1 cut(s) 727
PkrI GCNGC 3 cut(s) 29, 789, 907
PleI GAGTC 2 cut(s) 110, 215
PpsI GAGTC 2 cut(s) 110, 215
PscI ACATGT 1 cut(s) 710
Psp124BI GAGCTC 1 cut(s) 126
Psp6I CCWGG 4 cut(s) 21, 208, 727, 1275
PspEI GGTNACC 1 cut(s) 668
PspFI CCCAGC 1 cut(s) 870
PspGI CCWGG 4 cut(s) 21, 208, 727, 1275
PspN4I GGNNCC 5 cut(s) 41, 52, 207, 214, 328
PspPI GGNCC 4 cut(s) 51, 190, 213, 236
PsrI GAACNNNNNNTAC 2 cut(s) 1001, 1033
PsuI RGATCY 1 cut(s) 199
PvuII CAGCTG 1 cut(s) 908
RsaI GTAC 7 cut(s) 107, 228, 476, 842, 1193, 1265, 1304
RsaNI GTAC 7 cut(s) 106, 227, 475, 841, 1192, 1264, 1303
RseI CAYNNNNRTG 2 cut(s) 1100, 1160
SacI GAGCTC 1 cut(s) 126
SaqAI TTAA 4 cut(s) 675, 765, 993, 1047
SatI GCNGC 3 cut(s) 28, 788, 906
Sau3AI GATC 7 cut(s) 69, 199, 230, 462, 481, 830, 1249
Sau96I GGNCC 4 cut(s) 51, 190, 213, 236
SchI GAGTC 2 cut(s) 110, 215
ScrFI CCNGG 5 cut(s) 23, 100, 210, 729, 1277
SduI GDGCHC 4 cut(s) 84, 126, 850, 968
SfaNI GCATC 3 cut(s) 577, 874, 1270
SfiI GGCCNNNNNGGCC 1 cut(s) 243
SinI GGWCC 2 cut(s) 190, 213
SmiMI CAYNNNNRTG 2 cut(s) 1100, 1160
SmlI CTYRAG 1 cut(s) 644
SmoI CTYRAG 1 cut(s) 644
Sse9I AATT 3 cut(s) 9, 863, 1108
SsiI CCGC 5 cut(s) 27, 168, 188, 637, 702
SspMI CTAG 1 cut(s) 131
SstI GAGCTC 1 cut(s) 126
StyD4I CCNGG 5 cut(s) 21, 98, 208, 727, 1275
StyI CCWWGG 4 cut(s) 216, 919, 969, 1074
TaaI ACNGT 5 cut(s) 535, 735, 845, 856, 1288
TaiI ACGT 3 cut(s) 357, 928, 999
TaqI TCGA 2 cut(s) 579, 1112
TasI AATT 3 cut(s) 9, 863, 1108
TatI WGTACW 1 cut(s) 840
TauI GCSGC 1 cut(s) 30
TfiI GAWTC 4 cut(s) 138, 341, 396, 1033
Tru1I TTAA 4 cut(s) 675, 765, 993, 1047
Tru9I TTAA 4 cut(s) 675, 765, 993, 1047
TscAI CASTG 6 cut(s) 169, 433, 850, 1060, 1201, 1293
TseFI GTSAC 3 cut(s) 668, 706, 1061
TseI GCWGC 2 cut(s) 787, 905
Tsp45I GTSAC 3 cut(s) 668, 706, 1061
TspDTI ATGAA 3 cut(s) 606, 996, 1259
TspGWI ACGGA 3 cut(s) 335, 553, 941
TspRI CASTG 6 cut(s) 169, 433, 850, 1060, 1201, 1293
Van91I CCANNNNNTGG 2 cut(s) 60, 920
VpaK11BI GGWCC 2 cut(s) 190, 213
XapI RAATTY 2 cut(s) 9, 1108
XceI RCATGY 1 cut(s) 714
XmnI GAANNNNTTC 1 cut(s) 12
XspI CTAG 1 cut(s) 131
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.