Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0014959

Physical Location & Seq

Genomic Coordinates Reverse (-)

8781492 .. 8785821

Gene Structure 4330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G153200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 501 bp

ATGAGGCTACTGAACTACTTGGGGCAATGGAGAAGCGTAGCAAAGGAAGCAAAGGATCTCACAGTAACTGTAGCGAAATTTATGGGTTTGCTCCACGTCACCGACGCCTACCTCTGCTCCTCCACTCTCGTCTACGGTCCTAGTATGCTCCCTACCTTGAACATTTCTGGAGATGTGCTCCTGTCCGAACACGTGTCCCATCGATTTGGGAAGGTGGGTGCCGGAGATTTGGTCCTGGTTCGGTCTCCGAATGACCCTCGAAAGATTGTGACCAAGCGTATTTTGGGCATGGAGGGTGATCAAGTCACCTTCTTTGTCGATCCCAAGCACAGTGACAGGTCTCAGACTACTGTGGTGCCTAAGGGGCATGTTTGGATTCAGGGGGATAACATCTATTCCTCCTTTGATTCACGAACATATGGAGCTGTACCTTATGGTCTTATTCAAGGCAAAGTGTTTTGCAGGGTGTGGCCACCTGATGGCTTTGGATCATTGGATTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006465 GO:0006508 GO:0006518 GO:0006605 GO:0006626 GO:0006627 GO:0006807 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016485 GO:0019538 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033108 GO:0033365 GO:0034613 GO:0034622 GO:0034641 GO:0034982 GO:0042720 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0065003 GO:0070585 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072655 GO:0098796 GO:0098798 GO:0098800 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

Peptidase_S24 Peptidase_S26

Protein Analysis

167

Amino Acids

18.36

Weight (kDa)

8.91

Isoelectric Point (pI)

30.42

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0014959)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G53530 AT1G53530
fragaria_vesca	FvH4_3g17310 FvH4_3g17310
malus_domestica	MD03G1252300.v1.1 MD11G1273900.v1.1
prunus_persica	Prupe.4G153200_v2.0.a1
pyrus_communis	pycom11g24160
rosa_chinensis	RchiOBHm_Chr5g0028841
rosa_laevigata	RLG00000033118
rosa_rugosa	Rorug05G0110700
rosa_samantha	Rh5AG203100 Rh5BG201100 Rh5CG222200 Rh5DG204800
rosa_wichuraiana	Rw5G018370

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	2 cut(s)	218, 355
AccB7I	CCANNNNNTGG	1 cut(s)	479
AccI	GTMKAC	1 cut(s)	132
AclWI	GGATC	3 cut(s)	63, 314, 496
AcoI	YGGCCR	1 cut(s)	470
AcsI	RAATTY	1 cut(s)	77
AcvI	CACGTG	1 cut(s)	193
AcyI	GRCGYC	1 cut(s)	105
AfaI	GTAC	1 cut(s)	429
AfiI	CCNNNNNNNGG	1 cut(s)	479
AflIII	ACRYGT	2 cut(s)	190, 192
AgsI	TTSAA	2 cut(s)	160, 446
AjiI	CACGTC	1 cut(s)	97
AjnI	CCWGG	1 cut(s)	234
AluBI	AGCT	1 cut(s)	425
AluI	AGCT	1 cut(s)	425
Alw21I	GWGCWC	1 cut(s)	180
Alw26I	GTCTC	2 cut(s)	249, 345
AlwI	GGATC	3 cut(s)	63, 314, 496
AlwNI	CAGNNNCTG	1 cut(s)	68
AoxI	GGCC	1 cut(s)	470
ApoI	RAATTY	1 cut(s)	77
AspS9I	GGNCC	2 cut(s)	137, 232
AsuHPI	GGTGA	3 cut(s)	91, 298, 308
AvaII	GGWCC	2 cut(s)	137, 232
AxyI	CCTNAGG	1 cut(s)	360
BalI	TGGCCA	1 cut(s)	472
BanI	GGYRCC	2 cut(s)	218, 355
BbrPI	CACGTG	1 cut(s)	193
Bbv12I	GWGCWC	1 cut(s)	180
BccI	CCATC	2 cut(s)	207, 473
BciT130I	CCWGG	1 cut(s)	236
BclI	TGATCA	1 cut(s)	298
BcoDI	GTCTC	2 cut(s)	249, 345
BfaI	CTAG	1 cut(s)	141
BfmI	CTRYAG	1 cut(s)	69
BglI	GCCNNNNNGGC	1 cut(s)	364
Bme1390I	CCNGG	1 cut(s)	236
Bme18I	GGWCC	2 cut(s)	137, 232
BmgBI	CACGTC	1 cut(s)	97
BmgT120I	GGNCC	2 cut(s)	137, 232
BmiI	GGNNCC	2 cut(s)	220, 357
BmrFI	CCNGG	1 cut(s)	236
BplI	GAGNNNNNCTC	2 cut(s)	162, 194
BpmI	CTGGAG	1 cut(s)	189
Bsa29I	ATCGAT	1 cut(s)	202
BsaAI	YACGTR	1 cut(s)	193
BsaHI	GRCGYC	1 cut(s)	105
BsaI	GGTCTC	2 cut(s)	249, 345
BsaXI	ACNNNNNCTCC	4 cut(s)	101, 131, 216, 246
Bsc4I	CCNNNNNNNGG	1 cut(s)	479
Bse21I	CCTNAGG	1 cut(s)	360
Bse3DI	GCAATG	1 cut(s)	32
BseBI	CCWGG	1 cut(s)	236
BseCI	ATCGAT	1 cut(s)	202
BseLI	CCNNNNNNNGG	1 cut(s)	479
BseMI	GCAATG	1 cut(s)	32
BseMII	CTCAG	1 cut(s)	356
BseRI	GAGGAG	1 cut(s)	109
BshFI	GGCC	1 cut(s)	472
BshNI	GGYRCC	2 cut(s)	218, 355
BshVI	ATCGAT	1 cut(s)	202
BsiHKAI	GWGCWC	1 cut(s)	180
BsiSI	CCGG	1 cut(s)	222
BslFI	GGGAC	1 cut(s)	181
BslI	CCNNNNNNNGG	1 cut(s)	479
BsmAI	GTCTC	2 cut(s)	249, 345
BsmFI	GGGAC	1 cut(s)	181
BsnI	GGCC	1 cut(s)	472
Bso31I	GGTCTC	2 cut(s)	249, 345
Bsp1286I	GDGCHC	1 cut(s)	180
Bsp143I	GATC	4 cut(s)	55, 298, 319, 488
BspANI	GGCC	1 cut(s)	472
BspCNI	CTCAG	1 cut(s)	355
BspDI	ATCGAT	1 cut(s)	202
BspLI	GGNNCC	2 cut(s)	220, 357
BspPI	GGATC	3 cut(s)	63, 314, 496
BspT107I	GGYRCC	2 cut(s)	218, 355
BspTNI	GGTCTC	2 cut(s)	249, 345
BsrDI	GCAATG	1 cut(s)	32
BssMI	GATC	4 cut(s)	55, 298, 319, 488
BssNI	GRCGYC	1 cut(s)	105
Bst2UI	CCWGG	1 cut(s)	236
Bst4CI	ACNGT	5 cut(s)	64, 70, 137, 332, 352
BstACI	GRCGYC	1 cut(s)	105
BstBAI	YACGTR	1 cut(s)	193
BstDEI	CTNAG	2 cut(s)	342, 360
BstKTI	GATC	4 cut(s)	58, 301, 322, 491
BstMAI	GTCTC	2 cut(s)	249, 345
BstMBI	GATC	4 cut(s)	55, 298, 319, 488
BstMWI	GCNNNNNNNGC	2 cut(s)	47, 364
BstNI	CCWGG	1 cut(s)	236
BstNSI	RCATGY	1 cut(s)	371
BstSCI	CCNGG	1 cut(s)	234
BstSFI	CTRYAG	1 cut(s)	69
BstX2I	RGATCY	1 cut(s)	55
BstXI	CCANNNNNNTGG	1 cut(s)	206
BstYI	RGATCY	1 cut(s)	55
Bsu15I	ATCGAT	1 cut(s)	202
Bsu36I	CCTNAGG	1 cut(s)	360
BsuRI	GGCC	1 cut(s)	472
BsuTUI	ATCGAT	1 cut(s)	202
BtrI	CACGTC	1 cut(s)	97
BtsIMutI	CAGTG	1 cut(s)	337
CaiI	CAGNNNCTG	1 cut(s)	68
Cfr13I	GGNCC	2 cut(s)	137, 232
ClaI	ATCGAT	1 cut(s)	202
CseI	GACGC	1 cut(s)	113
Csp6I	GTAC	1 cut(s)	428
CviAII	CATG	2 cut(s)	289, 368
CviJI	RGCY	4 cut(s)	7, 425, 472, 483
CviKI_1	RGCY	4 cut(s)	7, 425, 472, 483
CviQI	GTAC	1 cut(s)	428
DdeI	CTNAG	2 cut(s)	342, 360
DpnI	GATC	4 cut(s)	57, 300, 321, 490
DpnII	GATC	4 cut(s)	55, 298, 319, 488
EaeI	YGGCCR	1 cut(s)	470
Eco31I	GGTCTC	2 cut(s)	249, 345
Eco47I	GGWCC	2 cut(s)	137, 232
Eco72I	CACGTG	1 cut(s)	193
Eco81I	CCTNAGG	1 cut(s)	360
EcoRII	CCWGG	1 cut(s)	234
FaeI	CATG	2 cut(s)	292, 371
FaiI	YATR	7 cut(s)	83, 146, 290, 369, 418, 420, 435
FaqI	GGGAC	1 cut(s)	181
FatI	CATG	2 cut(s)	288, 367
FauNDI	CATATG	1 cut(s)	418
FbaI	TGATCA	1 cut(s)	298
FblI	GTMKAC	1 cut(s)	132
FspBI	CTAG	1 cut(s)	141
GsuI	CTGGAG	1 cut(s)	189
HaeIII	GGCC	1 cut(s)	472
HapII	CCGG	1 cut(s)	222
HgaI	GACGC	1 cut(s)	113
Hin1I	GRCGYC	1 cut(s)	105
Hin1II	CATG	2 cut(s)	292, 371
HinfI	GANTC	2 cut(s)	376, 407
HpaII	CCGG	1 cut(s)	222
HphI	GGTGA	3 cut(s)	91, 298, 308
Hpy166II	GTNNAC	1 cut(s)	133
Hpy188I	TCNGA	3 cut(s)	187, 249, 345
Hpy188III	TCNNGA	2 cut(s)	168, 411
Hpy8I	GTNNAC	1 cut(s)	133
Hpy99I	CGWCG	1 cut(s)	107
HpyAV	CCTTC	2 cut(s)	205, 319
HpyCH4III	ACNGT	5 cut(s)	64, 70, 137, 332, 352
HpyCH4IV	ACGT	2 cut(s)	96, 192
HpyCH4V	TGCA	1 cut(s)	462
HpyF10VI	GCNNNNNNNGC	2 cut(s)	47, 364
HpyF3I	CTNAG	2 cut(s)	342, 360
HpySE526I	ACGT	2 cut(s)	96, 192
Hsp92I	GRCGYC	1 cut(s)	105
Hsp92II	CATG	2 cut(s)	292, 371
Ksp22I	TGATCA	1 cut(s)	298
Kzo9I	GATC	4 cut(s)	55, 298, 319, 488
LmnI	GCTCC	5 cut(s)	96, 122, 153, 183, 422
LpnPI	CCDG	9 cut(s)	153, 194, 221, 235, 248, 322, 365, 448, 489
MaeI	CTAG	1 cut(s)	141
MaeII	ACGT	2 cut(s)	96, 192
MaeIII	GTNAC	5 cut(s)	64, 97, 268, 304, 332
MalI	GATC	4 cut(s)	57, 300, 321, 490
MboI	GATC	4 cut(s)	55, 298, 319, 488
MflI	RGATCY	1 cut(s)	55
MhlI	GDGCHC	1 cut(s)	180
MlsI	TGGCCA	1 cut(s)	472
MluCI	AATT	1 cut(s)	77
MluNI	TGGCCA	1 cut(s)	472
MnlI	CCTC	5 cut(s)	122, 130, 267, 286, 409
Mox20I	TGGCCA	1 cut(s)	472
MscI	TGGCCA	1 cut(s)	472
Msp20I	TGGCCA	1 cut(s)	472
MspI	CCGG	1 cut(s)	222
MspR9I	CCNGG	1 cut(s)	236
MvaI	CCWGG	1 cut(s)	236
MwoI	GCNNNNNNNGC	2 cut(s)	47, 364
NdeI	CATATG	1 cut(s)	418
NdeII	GATC	4 cut(s)	55, 298, 319, 488
NlaIII	CATG	2 cut(s)	292, 371
NlaIV	GGNNCC	2 cut(s)	220, 357
NmuCI	GTSAC	4 cut(s)	97, 268, 304, 332
NspI	RCATGY	1 cut(s)	371
PfeI	GAWTC	2 cut(s)	376, 407
PflMI	CCANNNNNTGG	1 cut(s)	479
PmaCI	CACGTG	1 cut(s)	193
PmlI	CACGTG	1 cut(s)	193
Ppu21I	YACGTR	1 cut(s)	193
Psp6I	CCWGG	1 cut(s)	234
PspCI	CACGTG	1 cut(s)	193
PspGI	CCWGG	1 cut(s)	234
PspN4I	GGNNCC	2 cut(s)	220, 357
PspPI	GGNCC	2 cut(s)	137, 232
PstNI	CAGNNNCTG	1 cut(s)	68
PsuI	RGATCY	1 cut(s)	55
RsaI	GTAC	1 cut(s)	429
RsaNI	GTAC	1 cut(s)	428
Sau3AI	GATC	4 cut(s)	55, 298, 319, 488
Sau96I	GGNCC	2 cut(s)	137, 232
ScrFI	CCNGG	1 cut(s)	236
SduI	GDGCHC	1 cut(s)	180
SfcI	CTRYAG	1 cut(s)	69
SinI	GGWCC	2 cut(s)	137, 232
Sse9I	AATT	1 cut(s)	77
SspMI	CTAG	1 cut(s)	141
StyD4I	CCNGG	1 cut(s)	234
TaaI	ACNGT	5 cut(s)	64, 70, 137, 332, 352
TaiI	ACGT	2 cut(s)	99, 195
TaqI	TCGA	3 cut(s)	202, 259, 318
TaqII	GACCGA	1 cut(s)	231
TasI	AATT	1 cut(s)	77
TfiI	GAWTC	2 cut(s)	376, 407
TscAI	CASTG	1 cut(s)	337
TseFI	GTSAC	4 cut(s)	97, 268, 304, 332
Tsp45I	GTSAC	4 cut(s)	97, 268, 304, 332
TspRI	CASTG	1 cut(s)	337
Van91I	CCANNNNNTGG	1 cut(s)	479
VpaK11BI	GGWCC	2 cut(s)	137, 232
XapI	RAATTY	1 cut(s)	77
XceI	RCATGY	1 cut(s)	371
XcmI	CCANNNNNNNNNTGG	1 cut(s)	280
XmiI	GTMKAC	1 cut(s)	132
XspI	CTAG	1 cut(s)	141

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.