Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000005

Orthogroup ID

OG0010243

Physical Location & Seq

Genomic Coordinates Reverse (-)

9860402 .. 9866193

Gene Structure 5792 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug05G0110700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1542 bp

ATGGGTAGAGAAGACGGTAAACGAATTCGGAAACCAAAAGAAGAACACGAAAAGCCAAAGAGCATACCAGTCCTGCCATGGATGCGAACCCCAATTGACGTCAGCGCCTTGGACGAAAAACCCCTTTCTCTTCTGCCTCGCCTTGACCCCAGGTTGAAGGAGGCTTTGGAGAAGATGAAAATCTCATCCCTGTACCCAGTTCAGCTTGCTGTTTGGGAAGAGACTATTGGGCCTGGTGGGTTTCAGCGTGACTTGTGTGTTAATTCACCTACTGGAAGTGGGAAAACTCTGGCTTATGCTTTGCCAATTGTGCAAGCTTTGTCAACTCGCAATGTTAAATGCCTACGTGCTCTAGTTGTGTTGCCAACTCATGATTTAGCTTTGCAGGTGAAAGATGTGTTTTCTGCAATTGCTCCTGCAGTGGGCTTGTCAGTTGGTCTTGCAGTTGGGCAAACTTCGATTGCCAATGAGATTTCAGAACTTATTGATAAGCCTAAGCTTGAGTTTGGCGTTTGTTTCGACCAAGAGGATCGTGCGCCTCAATTACGTAGTGCGGTGGACATATTGGTGGCTACCCCCGGAAGGCTAATGGACCATATCAATAACACTAAGGGATTTACGCTTGAGCATCTCTGTTATCTTGTTGTTGATGAAACAGATCGATTACTCAGGGAGGCATACCAGAATTGGCTACCCACTGTGCTTCAATTAACTCGCTTTGATGATGATAGTTTATTTCCTCGTGCTCAAAATTTTCTACCTTCAGCGTTTGGTTCCTTCAGAACCATAAGGAGATCTGGTCTTGAGAGGGGGTTTAGAGGTACACCTTACCCCAGGCTTGTGAAGATGGTTCTTTCTGCCACTTTGACCCAGGATCCAAGCAAGCTAGCTCAACTTGATCTGCATCATCCTTTGTTCTTGACAACTGGAGAAATGCGTTATCGGCTTCCAGAAACATTGAAGTCCTACACTGTGTTCTGTGAAGCAAAGTACAAACCATTATATTTGGTTGCGCTCCTGCAAAGTTTAGGGGACGAGAAGTCCATCGTTTTTACATCATCAGTGGAGTCGACTCATCGTCTATGCACCTTACTGAACTTTTTTGATGAACTGCCTTTCAAGATAAAGGAGTATTCACGCGTTCAACGACATCGAAGCAAGACACTGGAGGCATTTCGGAAAGGAAAGATTCAAGTACTTGTTTCAACTGATGCAATGACTCGTGGAATGGATGTTGAAGGGGTGAGAAATGTGATCAACTATGATATGCCTGCCTACATAAAGACTTATGTTCACCGTGCGGGACGAACAGCAAGAGCTGGCCAAACTGGCTGTTGCTATTCATTATTGCGTGAAAAAGAGGTTCAACGATTCTACAAGATGTTACGCAAAGCTGAGAATAACTTCTGCTCTAAGTACTCTGTTCCTTCCAATTACATTGAACCGCTCCACGGTGTCTACGAATCTGCAAAGGAGAAACTGAAGGAGACGGTTGAAATGGAATCATCGAAGAAGAGACAAGTCGGTTCCAAGTTTTCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0005740 GO:0005743 GO:0006465 GO:0006508 GO:0006518 GO:0006605 GO:0006626 GO:0006627 GO:0006807 GO:0006810 GO:0006839 GO:0006886 GO:0006996 GO:0007005 GO:0008104 GO:0008150 GO:0008152 GO:0009987 GO:0010467 GO:0015031 GO:0015833 GO:0016020 GO:0016043 GO:0016485 GO:0019538 GO:0019866 GO:0022607 GO:0031090 GO:0031966 GO:0031967 GO:0031975 GO:0032991 GO:0033036 GO:0033108 GO:0033365 GO:0034613 GO:0034622 GO:0034641 GO:0034982 GO:0042720 GO:0042886 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043603 GO:0043933 GO:0044085 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044422 GO:0044424 GO:0044425 GO:0044429 GO:0044444 GO:0044446 GO:0044455 GO:0044464 GO:0045184 GO:0046907 GO:0051179 GO:0051234 GO:0051604 GO:0051641 GO:0051649 GO:0065003 GO:0070585 GO:0070727 GO:0071702 GO:0071704 GO:0071705 GO:0071840 GO:0072594 GO:0072655 GO:0098796 GO:0098798 GO:0098800 GO:1901564

KEGG Pathways

Metabolic & Signaling

ko03060 map03060

Pfam Domains

Protein Families

Peptidase_S24 Peptidase_S26

Protein Analysis

513

Amino Acids

58.15

Weight (kDa)

9.29

Isoelectric Point (pI)

34.65

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DEAD	PF00270	66 - 290	4.2e-28	DEAD/DEAH box helicase
ResIII	PF04851	82 - 229	2.8e-08	Type III restriction enzyme, res subunit
Helicase_C	PF00271	335 - 441	2.2e-22	Helicase conserved C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0010243)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G17050 AT1G36623 AT1G78510 AT1G78510
fragaria_vesca	FvH4_3g17330 FvH4_3g17330
malus_domestica	MD03G1252200.v1.1 MD11G1273800.v1.1
prunus_persica	Prupe.4G153300_v2.0.a1
pyrus_communis	pycom03g20020 pycom11g24150
rosa_chinensis	RchiOBHm_Chr5g0028851
rosa_laevigata	RLG00000033119
rosa_multiflora	Rmu_sc0005178.1_g000010
rosa_roxburghii	Rroxscaffold_1G00051040
rosa_rugosa	Rorug05G0110700
rosa_samantha	Rh5AG203200 Rh5BG201200 Rh5CG222300 Rh5DG204900
rosa_wichuraiana	Rw5G018380

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	376
AatII	GACGTC	1 cut(s)	102
Acc36I	ACCTGC	1 cut(s)	376
AccBSI	CCGCTC	1 cut(s)	1447
AccI	GTMKAC	2 cut(s)	1070, 1458
AccII	CGCG	1 cut(s)	1140
AciI	CCGC	3 cut(s)	554, 1301, 1445
AclWI	GGATC	3 cut(s)	537, 869, 882
AcoI	YGGCCR	1 cut(s)	1321
AcsI	RAATTY	2 cut(s)	24, 751
AcuI	CTGAAG	3 cut(s)	747, 763, 1502
AcyI	GRCGYC	1 cut(s)	99
AfaI	GTAC	5 cut(s)	194, 823, 992, 1197, 1418
AfiI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
AflIII	ACRYGT	1 cut(s)	1138
AhdI	GACNNNNNGTC	2 cut(s)	1039, 1077
AjnI	CCWGG	4 cut(s)	149, 232, 833, 870
AjuI	GAANNNNNNNTTGG	4 cut(s)	149, 181, 210, 242
AluBI	AGCT	8 cut(s)	205, 317, 380, 499, 886, 890, 1319, 1394
AluI	AGCT	8 cut(s)	205, 317, 380, 499, 886, 890, 1319, 1394
Alw21I	GWGCWC	2 cut(s)	352, 748
Alw26I	GTCTC	3 cut(s)	215, 1481, 1510
AlwI	GGATC	3 cut(s)	537, 869, 882
AoxI	GGCC	2 cut(s)	230, 1321
ApoI	RAATTY	2 cut(s)	24, 751
Asp700I	GAANNNNTTC	1 cut(s)	1403
AspLEI	GCGC	3 cut(s)	107, 538, 1015
AspS9I	GGNCC	2 cut(s)	230, 592
AsuC2I	CCSGG	1 cut(s)	579
AsuHPI	GGTGA	4 cut(s)	258, 400, 1255, 1286
AsuNHI	GCTAGC	1 cut(s)	886
AvaII	GGWCC	1 cut(s)	592
BalI	TGGCCA	1 cut(s)	1323
BamHI	GGATCC	1 cut(s)	874
BauI	CACGAG	2 cut(s)	741, 1221
BbsI	GAAGAC	1 cut(s)	18
Bbv12I	GWGCWC	2 cut(s)	352, 748
BccI	CCATC	2 cut(s)	841, 1052
BciT130I	CCWGG	4 cut(s)	151, 234, 835, 872
BclI	TGATCA	1 cut(s)	1254
BcnI	CCSGG	1 cut(s)	579
BcoDI	GTCTC	3 cut(s)	215, 1481, 1510
BfaI	CTAG	2 cut(s)	353, 887
BfmI	CTRYAG	1 cut(s)	417
BfoI	RGCGCY	1 cut(s)	108
BfuAI	ACCTGC	1 cut(s)	376
BglI	GCCNNNNNGGC	1 cut(s)	1329
BglII	AGATCT	1 cut(s)	794
BmcAI	AGTACT	2 cut(s)	1197, 1418
Bme1390I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
Bme18I	GGWCC	1 cut(s)	592
BmeRI	GACNNNNNGTC	2 cut(s)	1039, 1077
BmgT120I	GGNCC	2 cut(s)	230, 592
BmiI	GGNNCC	3 cut(s)	775, 876, 1528
BmrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
BmrI	ACTGGG	1 cut(s)	191
BmsI	GCATC	4 cut(s)	72, 637, 913, 1201
BmtI	GCTAGC	1 cut(s)	890
BmuI	ACTGGG	1 cut(s)	191
BpiI	GAAGAC	1 cut(s)	18
BpmI	CTGGAG	2 cut(s)	948, 1187
Bpu10I	CCTNAGC	1 cut(s)	495
BpuEI	CTTGAG	3 cut(s)	521, 644, 824
BpuMI	CCSGG	1 cut(s)	579
Bsa29I	ATCGAT	1 cut(s)	661
BsaAI	YACGTR	2 cut(s)	347, 548
BsaBI	GATNNNNATC	2 cut(s)	179, 903
BsaHI	GRCGYC	1 cut(s)	99
BsaJI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BsaXI	ACNNNNNCTCC	2 cut(s)	784, 814
Bsc4I	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
Bse1I	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
Bse3DI	GCAATG	2 cut(s)	337, 1221
Bse8I	GATNNNNATC	2 cut(s)	179, 903
BseBI	CCWGG	4 cut(s)	151, 234, 835, 872
BseCI	ATCGAT	1 cut(s)	661
BseDI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BseGI	GGATG	4 cut(s)	87, 185, 907, 1237
BseJI	GATNNNNATC	2 cut(s)	179, 903
BseLI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
BseMI	GCAATG	2 cut(s)	337, 1221
BseMII	CTCAG	2 cut(s)	682, 1386
BseNI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
Bsh1236I	CGCG	1 cut(s)	1140
BshFI	GGCC	2 cut(s)	232, 1323
BshVI	ATCGAT	1 cut(s)	661
BsiHKAI	GWGCWC	2 cut(s)	352, 748
BsiSI	CCGG	1 cut(s)	579
BslFI	GGGAC	2 cut(s)	1046, 1317
BslI	CCNNNNNNNGG	3 cut(s)	422, 582, 1451
BsmAI	GTCTC	3 cut(s)	215, 1481, 1510
BsmBI	CGTCTC	1 cut(s)	1481
BsmFI	GGGAC	2 cut(s)	1046, 1317
BsnI	GGCC	2 cut(s)	232, 1323
Bsp1286I	GDGCHC	2 cut(s)	352, 748
Bsp143I	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
Bsp19I	CCATGG	1 cut(s)	77
BspACI	CCGC	3 cut(s)	554, 1301, 1445
BspANI	GGCC	2 cut(s)	232, 1323
BspCNI	CTCAG	2 cut(s)	681, 1387
BspDI	ATCGAT	1 cut(s)	661
BspFNI	CGCG	1 cut(s)	1140
BspHI	TCATGA	1 cut(s)	370
BspLI	GGNNCC	3 cut(s)	775, 876, 1528
BspMAI	CTGCAG	1 cut(s)	421
BspMI	ACCTGC	1 cut(s)	376
BspOI	GCTAGC	1 cut(s)	890
BspPI	GGATC	3 cut(s)	537, 869, 882
BsrBI	CCGCTC	1 cut(s)	1447
BsrDI	GCAATG	2 cut(s)	337, 1221
BsrI	ACTGG	6 cut(s)	68, 197, 277, 931, 1170, 1333
BssECI	CCNNGG	7 cut(s)	77, 108, 149, 577, 833, 870, 1450
BssMI	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
BssNI	GRCGYC	1 cut(s)	99
BssSI	CACGAG	2 cut(s)	741, 1221
BssT1I	CCWWGG	2 cut(s)	77, 108
Bst2BI	CACGAG	2 cut(s)	741, 1221
Bst2UI	CCWGG	4 cut(s)	151, 234, 835, 872
Bst4CI	ACNGT	6 cut(s)	17, 700, 973, 1298, 1454, 1492
Bst6I	CTCTTC	3 cut(s)	135, 213, 1508
BstACI	GRCGYC	1 cut(s)	99
BstBAI	YACGTR	2 cut(s)	347, 548
BstC8I	GCNNGC	6 cut(s)	207, 315, 884, 888, 1272, 1321
BstDEI	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
BstDSI	CCRYGG	2 cut(s)	77, 1450
BstF5I	GGATG	4 cut(s)	87, 185, 907, 1237
BstFNI	CGCG	1 cut(s)	1140
BstH2I	RGCGCY	1 cut(s)	108
BstHHI	GCGC	3 cut(s)	107, 538, 1015
BstKTI	GATC	6 cut(s)	532, 661, 797, 877, 901, 1257
BstMAI	GTCTC	3 cut(s)	215, 1481, 1510
BstMBI	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
BstMWI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
BstNI	CCWGG	4 cut(s)	151, 234, 835, 872
BstSCI	CCNGG	5 cut(s)	149, 232, 577, 833, 870
BstSFI	CTRYAG	1 cut(s)	417
BstSNI	TACGTA	1 cut(s)	548
BstUI	CGCG	1 cut(s)	1140
BstV2I	GAAGAC	1 cut(s)	18
BstX2I	RGATCY	2 cut(s)	794, 874
BstYI	RGATCY	2 cut(s)	794, 874
Bsu15I	ATCGAT	1 cut(s)	661
BsuRI	GGCC	2 cut(s)	232, 1323
BsuTUI	ATCGAT	1 cut(s)	661
BtgI	CCRYGG	2 cut(s)	77, 1450
BtsCI	GGATG	4 cut(s)	87, 185, 907, 1237
BtsI	GCAGTG	1 cut(s)	426
BtsIMutI	CAGTG	5 cut(s)	426, 696, 969, 1068, 1163
BveI	ACCTGC	1 cut(s)	376
Cac8I	GCNNGC	6 cut(s)	207, 315, 884, 888, 1272, 1321
CciI	TCATGA	1 cut(s)	370
CfoI	GCGC	3 cut(s)	107, 538, 1015
Cfr13I	GGNCC	2 cut(s)	230, 592
ClaI	ATCGAT	1 cut(s)	661
Csp6I	GTAC	5 cut(s)	193, 822, 991, 1196, 1417
CviAII	CATG	2 cut(s)	78, 371
CviQI	GTAC	5 cut(s)	193, 822, 991, 1196, 1417
DdeI	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
DpnI	GATC	6 cut(s)	531, 660, 796, 876, 900, 1256
DpnII	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
DriI	GACNNNNNGTC	2 cut(s)	1039, 1077
EaeI	YGGCCR	1 cut(s)	1321
Eam1104I	CTCTTC	3 cut(s)	135, 213, 1508
Eam1105I	GACNNNNNGTC	2 cut(s)	1039, 1077
EarI	CTCTTC	3 cut(s)	135, 213, 1508
Eco105I	TACGTA	1 cut(s)	548
Eco130I	CCWWGG	2 cut(s)	77, 108
Eco47I	GGWCC	1 cut(s)	592
Eco57I	CTGAAG	3 cut(s)	747, 763, 1502
EcoRI	GAATTC	1 cut(s)	24
EcoRII	CCWGG	4 cut(s)	149, 232, 833, 870
EcoT14I	CCWWGG	2 cut(s)	77, 108
ErhI	CCWWGG	2 cut(s)	77, 108
Esp3I	CGTCTC	1 cut(s)	1481
FaeI	CATG	2 cut(s)	81, 374
FaqI	GGGAC	2 cut(s)	1046, 1317
FatI	CATG	2 cut(s)	77, 370
FauI	CCCGC	1 cut(s)	1294
FbaI	TGATCA	1 cut(s)	1254
FblI	GTMKAC	2 cut(s)	1070, 1458
FokI	GGATG	4 cut(s)	94, 172, 894, 1244
FspBI	CTAG	2 cut(s)	353, 887
GlaI	GCGC	3 cut(s)	106, 537, 1014
GsuI	CTGGAG	2 cut(s)	948, 1187
HaeII	RGCGCY	1 cut(s)	108
HaeIII	GGCC	2 cut(s)	232, 1323
HapII	CCGG	1 cut(s)	579
HhaI	GCGC	3 cut(s)	107, 538, 1015
Hin1I	GRCGYC	1 cut(s)	99
Hin1II	CATG	2 cut(s)	81, 374
Hin6I	GCGC	3 cut(s)	105, 536, 1013
HinP1I	GCGC	3 cut(s)	105, 536, 1013
HincII	GTYRAC	2 cut(s)	324, 1071
HindII	GTYRAC	2 cut(s)	324, 1071
HindIII	AAGCTT	2 cut(s)	315, 497
HinfI	GANTC	7 cut(s)	1067, 1072, 1189, 1219, 1371, 1463, 1502
HpaII	CCGG	1 cut(s)	579
HphI	GGTGA	4 cut(s)	258, 400, 1255, 1286
Hpy166II	GTNNAC	7 cut(s)	20, 324, 559, 824, 1071, 1294, 1459
Hpy188I	TCNGA	4 cut(s)	30, 478, 782, 1179
Hpy188III	TCNNGA	6 cut(s)	371, 803, 919, 950, 1120, 1539
Hpy8I	GTNNAC	7 cut(s)	20, 324, 559, 824, 1071, 1294, 1459
HpyAV	CCTTC	7 cut(s)	151, 576, 771, 787, 1232, 1437, 1477
HpyCH4III	ACNGT	6 cut(s)	17, 700, 973, 1298, 1454, 1492
HpyCH4IV	ACGT	3 cut(s)	99, 346, 547
HpyF10VI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
HpyF3I	CTNAG	5 cut(s)	495, 609, 668, 1395, 1413
HpySE526I	ACGT	3 cut(s)	99, 346, 547
Hsp92I	GRCGYC	1 cut(s)	99
Hsp92II	CATG	2 cut(s)	81, 374
HspAI	GCGC	3 cut(s)	105, 536, 1013
Ksp22I	TGATCA	1 cut(s)	1254
Kzo9I	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
LmnI	GCTCC	3 cut(s)	418, 1020, 1452
LweI	GCATC	4 cut(s)	72, 637, 913, 1201
MaeI	CTAG	2 cut(s)	353, 887
MaeII	ACGT	3 cut(s)	99, 346, 547
MaeIII	GTNAC	2 cut(s)	248, 1383
MalI	GATC	6 cut(s)	531, 660, 796, 876, 900, 1256
MbiI	CCGCTC	1 cut(s)	1447
MboI	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
MboII	GAAGA	8 cut(s)	23, 53, 122, 184, 230, 856, 1522, 1525
MfeI	CAATTG	3 cut(s)	93, 306, 408
MflI	RGATCY	2 cut(s)	794, 874
MhlI	GDGCHC	2 cut(s)	352, 748
MlsI	TGGCCA	1 cut(s)	1323
MluI	ACGCGT	1 cut(s)	1138
MluNI	TGGCCA	1 cut(s)	1323
MlyI	GAGTC	3 cut(s)	1066, 1076, 1213
Mox20I	TGGCCA	1 cut(s)	1323
MroXI	GAANNNNTTC	1 cut(s)	1403
MscI	TGGCCA	1 cut(s)	1323
MseI	TTAA	3 cut(s)	261, 336, 710
MslI	CAYNNNNRTG	1 cut(s)	566
Msp20I	TGGCCA	1 cut(s)	1323
MspI	CCGG	1 cut(s)	579
MspR9I	CCNGG	5 cut(s)	151, 234, 579, 835, 872
MunI	CAATTG	3 cut(s)	93, 306, 408
MvaI	CCWGG	4 cut(s)	151, 234, 835, 872
MvnI	CGCG	1 cut(s)	1140
MwoI	GCNNNNNNNGC	4 cut(s)	82, 310, 943, 1329
NciI	CCSGG	1 cut(s)	579
NcoI	CCATGG	1 cut(s)	77
NdeII	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
NheI	GCTAGC	1 cut(s)	886
NlaIII	CATG	2 cut(s)	81, 374
NlaIV	GGNNCC	3 cut(s)	775, 876, 1528
NmuCI	GTSAC	1 cut(s)	248
PagI	TCATGA	1 cut(s)	370
PaqCI	CACCTGC	1 cut(s)	376
PcsI	WCGNNNNNNNCGW	2 cut(s)	1144, 1458
PdmI	GAANNNNTTC	1 cut(s)	1403
PfeI	GAWTC	4 cut(s)	1189, 1371, 1463, 1502
PleI	GAGTC	3 cut(s)	1066, 1075, 1213
PpsI	GAGTC	3 cut(s)	1066, 1075, 1213
Ppu21I	YACGTR	2 cut(s)	347, 548
Psp6I	CCWGG	4 cut(s)	149, 232, 833, 870
PspGI	CCWGG	4 cut(s)	149, 232, 833, 870
PspN4I	GGNNCC	3 cut(s)	775, 876, 1528
PspPI	GGNCC	2 cut(s)	230, 592
PstI	CTGCAG	1 cut(s)	421
PsuI	RGATCY	2 cut(s)	794, 874
RsaI	GTAC	5 cut(s)	194, 823, 992, 1197, 1418
RsaNI	GTAC	5 cut(s)	193, 822, 991, 1196, 1417
RseI	CAYNNNNRTG	1 cut(s)	566
SalI	GTCGAC	1 cut(s)	1069
SaqAI	TTAA	3 cut(s)	261, 336, 710
Sau3AI	GATC	6 cut(s)	529, 658, 794, 874, 898, 1254
Sau96I	GGNCC	2 cut(s)	230, 592
ScaI	AGTACT	2 cut(s)	1197, 1418
SchI	GAGTC	3 cut(s)	1066, 1076, 1213
ScrFI	CCNGG	5 cut(s)	151, 234, 579, 835, 872
SduI	GDGCHC	2 cut(s)	352, 748
SfaNI	GCATC	4 cut(s)	72, 637, 913, 1201
SfcI	CTRYAG	1 cut(s)	417
SinI	GGWCC	1 cut(s)	592
SmiMI	CAYNNNNRTG	1 cut(s)	566
SmlI	CTYRAG	3 cut(s)	500, 623, 803
SmoI	CTYRAG	3 cut(s)	500, 623, 803
SnaBI	TACGTA	1 cut(s)	548
SsiI	CCGC	3 cut(s)	554, 1301, 1445
SspMI	CTAG	2 cut(s)	353, 887
StyD4I	CCNGG	5 cut(s)	149, 232, 577, 833, 870
StyI	CCWWGG	2 cut(s)	77, 108
TaaI	ACNGT	6 cut(s)	17, 700, 973, 1298, 1454, 1492
TaiI	ACGT	3 cut(s)	102, 349, 550
TaqI	TCGA	6 cut(s)	458, 519, 661, 1070, 1153, 1508
TatI	WGTACW	3 cut(s)	990, 1195, 1416
TfiI	GAWTC	4 cut(s)	1189, 1371, 1463, 1502
Tru1I	TTAA	3 cut(s)	261, 336, 710
Tru9I	TTAA	3 cut(s)	261, 336, 710
TscAI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
TseFI	GTSAC	1 cut(s)	248
Tsp45I	GTSAC	1 cut(s)	248
TspDTI	ATGAA	4 cut(s)	191, 666, 1122, 1332
TspRI	CASTG	5 cut(s)	426, 703, 976, 1068, 1170
VpaK11BI	GGWCC	1 cut(s)	592
XapI	RAATTY	2 cut(s)	24, 751
XcmI	CCANNNNNNNNNTGG	1 cut(s)	75
XmiI	GTMKAC	2 cut(s)	1070, 1458
XmnI	GAANNNNTTC	1 cut(s)	1403
XspI	CTAG	2 cut(s)	353, 887
ZraI	GACGTC	1 cut(s)	100
ZrmI	AGTACT	2 cut(s)	1197, 1418

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.