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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G53190 AT1G53190 AT3G15070 AT3G15070 |
| fragaria_vesca | FvH4_3g19090 FvH4_3g19090 FvH4_3g19090 |
| malus_domestica | MD03G1237000.v1.1 MD11G1257600.v1.1 |
| prunus_persica | Prupe.4G172400_v2.0.a1 Prupe.4G172400_v2.0.a1 |
| pyrus_communis | pycom03g18280 pycom03g18290 pycom11g22740 |
| rosa_chinensis | RchiOBHm_Chr5g0031881 |
| rosa_laevigata | RLG00000033355 |
| rosa_multiflora | Rmu_sc0005375.1_g000030 |
| rosa_roxburghii | Rroxscaffold_1G00048380 |
| rosa_rugosa | Rorug05G0128400 Rorug05G0128500 |
| rosa_samantha | Rh5AG222700 Rh5BG222900 Rh5CG246000 Rh5DG227700 |
| rosa_wichuraiana | Rw5G020290 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 1509 |
| AccB1I | GGYRCC | 1 cut(s) | 104 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1145 |
| AccBSI | CCGCTC | 1 cut(s) | 949 |
| AccII | CGCG | 2 cut(s) | 1075, 1518 |
| AciI | CCGC | 3 cut(s) | 356, 947, 986 |
| AclWI | GGATC | 2 cut(s) | 347, 771 |
| AcoI | YGGCCR | 1 cut(s) | 1360 |
| AcsI | RAATTY | 2 cut(s) | 481, 1438 |
| AcuI | CTGAAG | 7 cut(s) | 135, 486, 504, 786, 1135, 1214, 1635 |
| AcyI | GRCGYC | 2 cut(s) | 105, 261 |
| AfaI | GTAC | 2 cut(s) | 224, 293 |
| AfeI | AGCGCT | 2 cut(s) | 188, 734 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 100, 933, 995, 1031, 1145, 1172 |
| AflIII | ACRYGT | 1 cut(s) | 1320 |
| AjnI | CCWGG | 4 cut(s) | 475, 806, 1029, 1126 |
| Alw26I | GTCTC | 2 cut(s) | 1181, 1290 |
| AlwI | GGATC | 2 cut(s) | 347, 771 |
| Aor51HI | AGCGCT | 2 cut(s) | 188, 734 |
| AoxI | GGCC | 5 cut(s) | 216, 469, 1006, 1163, 1360 |
| ApeKI | GCWGC | 4 cut(s) | 200, 358, 1077, 1275 |
| ApoI | RAATTY | 2 cut(s) | 481, 1438 |
| AspLEI | GCGC | 5 cut(s) | 107, 189, 735, 1077, 1305 |
| AspS9I | GGNCC | 4 cut(s) | 156, 217, 443, 632 |
| AsuC2I | CCSGG | 1 cut(s) | 1633 |
| AsuHPI | GGTGA | 1 cut(s) | 1160 |
| AsuII | TTCGAA | 1 cut(s) | 533 |
| AvaII | GGWCC | 3 cut(s) | 156, 443, 632 |
| BaeGI | GKGCMC | 1 cut(s) | 1601 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 1535, 1568 |
| BalI | TGGCCA | 1 cut(s) | 1362 |
| BanI | GGYRCC | 1 cut(s) | 104 |
| BbvCI | CCTCAGC | 1 cut(s) | 502 |
| BbvI | GCAGC | 4 cut(s) | 187, 345, 1089, 1287 |
| BccI | CCATC | 8 cut(s) | 98, 126, 208, 370, 545, 711, 785, 1610 |
| BciT130I | CCWGG | 4 cut(s) | 477, 808, 1031, 1128 |
| BcnI | CCSGG | 1 cut(s) | 1633 |
| BcoDI | GTCTC | 2 cut(s) | 1181, 1290 |
| BfaI | CTAG | 4 cut(s) | 27, 369, 513, 909 |
| BfmI | CTRYAG | 2 cut(s) | 396, 855 |
| BfoI | RGCGCY | 3 cut(s) | 108, 190, 736 |
| BisI | GCNGC | 4 cut(s) | 201, 359, 1078, 1276 |
| BlsI | GCNGC | 4 cut(s) | 202, 360, 1079, 1277 |
| Bme1390I | CCNGG | 5 cut(s) | 477, 808, 1031, 1128, 1633 |
| Bme18I | GGWCC | 3 cut(s) | 156, 443, 632 |
| BmgT120I | GGNCC | 4 cut(s) | 156, 217, 443, 632 |
| BmiI | GGNNCC | 4 cut(s) | 106, 157, 862, 1036 |
| BmrFI | CCNGG | 5 cut(s) | 477, 808, 1031, 1128, 1633 |
| BmrI | ACTGGG | 2 cut(s) | 214, 678 |
| BmsI | GCATC | 7 cut(s) | 157, 247, 432, 559, 946, 970, 1451 |
| BmuI | ACTGGG | 2 cut(s) | 214, 678 |
| Bpu10I | CCTNAGC | 2 cut(s) | 183, 502 |
| Bpu14I | TTCGAA | 1 cut(s) | 533 |
| BpuEI | CTTGAG | 1 cut(s) | 1240 |
| BpuMI | CCSGG | 1 cut(s) | 1633 |
| BsaAI | YACGTR | 1 cut(s) | 976 |
| BsaHI | GRCGYC | 2 cut(s) | 105, 261 |
| BsaJI | CCNNGG | 5 cut(s) | 476, 864, 1029, 1030, 1171 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 100, 933, 995, 1031, 1145, 1172 |
| Bse118I | RCCGGY | 1 cut(s) | 957 |
| Bse1I | ACTGG | 5 cut(s) | 159, 220, 610, 673, 1378 |
| Bse3DI | GCAATG | 1 cut(s) | 853 |
| BseBI | CCWGG | 4 cut(s) | 477, 808, 1031, 1128 |
| BseDI | CCNNGG | 5 cut(s) | 476, 864, 1029, 1030, 1171 |
| BseGI | GGATG | 6 cut(s) | 90, 219, 436, 574, 937, 1466 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 100, 933, 995, 1031, 1145, 1172 |
| BseMI | GCAATG | 1 cut(s) | 853 |
| BseMII | CTCAG | 7 cut(s) | 174, 516, 650, 1109, 1176, 1374, 1479 |
| BseNI | ACTGG | 5 cut(s) | 159, 220, 610, 673, 1378 |
| BseRI | GAGGAG | 3 cut(s) | 933, 1346, 1400 |
| BseSI | GKGCMC | 1 cut(s) | 1601 |
| BseXI | GCAGC | 4 cut(s) | 187, 345, 1089, 1287 |
| Bsh1236I | CGCG | 2 cut(s) | 1075, 1518 |
| BshFI | GGCC | 5 cut(s) | 218, 471, 1008, 1165, 1362 |
| BshNI | GGYRCC | 1 cut(s) | 104 |
| BsiSI | CCGG | 3 cut(s) | 934, 958, 1632 |
| BslFI | GGGAC | 2 cut(s) | 63, 169 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 100, 933, 995, 1031, 1145, 1172 |
| BsmAI | GTCTC | 2 cut(s) | 1181, 1290 |
| BsmFI | GGGAC | 2 cut(s) | 63, 169 |
| BsnI | GGCC | 5 cut(s) | 218, 471, 1008, 1165, 1362 |
| Bsp119I | TTCGAA | 1 cut(s) | 533 |
| Bsp1286I | GDGCHC | 1 cut(s) | 1601 |
| Bsp143I | GATC | 2 cut(s) | 352, 763 |
| Bsp19I | CCATGG | 1 cut(s) | 864 |
| BspACI | CCGC | 3 cut(s) | 356, 947, 986 |
| BspANI | GGCC | 5 cut(s) | 218, 471, 1008, 1165, 1362 |
| BspCNI | CTCAG | 7 cut(s) | 175, 515, 649, 1108, 1177, 1375, 1478 |
| BspFNI | CGCG | 2 cut(s) | 1075, 1518 |
| BspHI | TCATGA | 1 cut(s) | 898 |
| BspLI | GGNNCC | 4 cut(s) | 106, 157, 862, 1036 |
| BspMAI | CTGCAG | 1 cut(s) | 400 |
| BspPI | GGATC | 2 cut(s) | 347, 771 |
| BspT104I | TTCGAA | 1 cut(s) | 533 |
| BspT107I | GGYRCC | 1 cut(s) | 104 |
| BsrBI | CCGCTC | 1 cut(s) | 949 |
| BsrDI | GCAATG | 1 cut(s) | 853 |
| BsrFI | RCCGGY | 1 cut(s) | 957 |
| BsrI | ACTGG | 5 cut(s) | 159, 220, 610, 673, 1378 |
| BssAI | RCCGGY | 1 cut(s) | 957 |
| BssECI | CCNNGG | 5 cut(s) | 476, 864, 1029, 1030, 1171 |
| BssMI | GATC | 2 cut(s) | 352, 763 |
| BssNI | GRCGYC | 2 cut(s) | 105, 261 |
| BssT1I | CCWWGG | 2 cut(s) | 864, 1171 |
| Bst2UI | CCWGG | 4 cut(s) | 477, 808, 1031, 1128 |
| Bst4CI | ACNGT | 3 cut(s) | 227, 856, 872 |
| Bst6I | CTCTTC | 2 cut(s) | 396, 1539 |
| BstACI | GRCGYC | 2 cut(s) | 105, 261 |
| BstBAI | YACGTR | 1 cut(s) | 976 |
| BstBI | TTCGAA | 1 cut(s) | 533 |
| BstC8I | GCNNGC | 1 cut(s) | 744 |
| BstDEI | CTNAG | 8 cut(s) | 183, 502, 636, 1095, 1185, 1196, 1383, 1465 |
| BstDSI | CCRYGG | 1 cut(s) | 864 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| BstF5I | GGATG | 6 cut(s) | 90, 219, 436, 574, 937, 1466 |
| BstFNI | CGCG | 2 cut(s) | 1075, 1518 |
| BstH2I | RGCGCY | 3 cut(s) | 108, 190, 736 |
| BstHHI | GCGC | 5 cut(s) | 107, 189, 735, 1077, 1305 |
| BstKTI | GATC | 2 cut(s) | 355, 766 |
| BstMAI | GTCTC | 2 cut(s) | 1181, 1290 |
| BstMBI | GATC | 2 cut(s) | 352, 763 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 739, 1043, 1368, 1605 |
| BstNI | CCWGG | 4 cut(s) | 477, 808, 1031, 1128 |
| BstNSI | RCATGY | 3 cut(s) | 19, 1303, 1324 |
| BstSCI | CCNGG | 5 cut(s) | 475, 806, 1029, 1126, 1631 |
| BstSFI | CTRYAG | 2 cut(s) | 396, 855 |
| BstSLI | GKGCMC | 1 cut(s) | 1601 |
| BstUI | CGCG | 2 cut(s) | 1075, 1518 |
| BstV1I | GCAGC | 4 cut(s) | 187, 345, 1089, 1287 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 227 |
| BsuRI | GGCC | 5 cut(s) | 218, 471, 1008, 1165, 1362 |
| BtgI | CCRYGG | 1 cut(s) | 864 |
| BtsCI | GGATG | 6 cut(s) | 90, 219, 436, 574, 937, 1466 |
| BtsIMutI | CAGTG | 5 cut(s) | 232, 528, 852, 877, 1371 |
| Cac8I | GCNNGC | 1 cut(s) | 744 |
| CciI | TCATGA | 1 cut(s) | 898 |
| CfoI | GCGC | 5 cut(s) | 107, 189, 735, 1077, 1305 |
| Cfr10I | RCCGGY | 1 cut(s) | 957 |
| Cfr13I | GGNCC | 4 cut(s) | 156, 217, 443, 632 |
| CseI | GACGC | 1 cut(s) | 250 |
| Csp6I | GTAC | 2 cut(s) | 223, 292 |
| CviQI | GTAC | 2 cut(s) | 223, 292 |
| DdeI | CTNAG | 8 cut(s) | 183, 502, 636, 1095, 1185, 1196, 1383, 1465 |
| DinI | GGCGCC | 1 cut(s) | 106 |
| DpnI | GATC | 2 cut(s) | 354, 765 |
| DpnII | GATC | 2 cut(s) | 352, 763 |
| DraI | TTTAAA | 1 cut(s) | 1569 |
| EaeI | YGGCCR | 1 cut(s) | 1360 |
| Eam1104I | CTCTTC | 2 cut(s) | 396, 1539 |
| EarI | CTCTTC | 2 cut(s) | 396, 1539 |
| Eco130I | CCWWGG | 2 cut(s) | 864, 1171 |
| Eco147I | AGGCCT | 2 cut(s) | 471, 1165 |
| Eco32I | GATATC | 1 cut(s) | 896 |
| Eco47I | GGWCC | 3 cut(s) | 156, 443, 632 |
| Eco47III | AGCGCT | 2 cut(s) | 188, 734 |
| Eco57I | CTGAAG | 7 cut(s) | 135, 486, 504, 786, 1135, 1214, 1635 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| EcoO109I | RGGNCCY | 1 cut(s) | 632 |
| EcoRII | CCWGG | 4 cut(s) | 475, 806, 1029, 1126 |
| EcoRV | GATATC | 1 cut(s) | 896 |
| EcoT14I | CCWWGG | 2 cut(s) | 864, 1171 |
| EcoT22I | ATGCAT | 1 cut(s) | 840 |
| EgeI | GGCGCC | 1 cut(s) | 106 |
| EheI | GGCGCC | 1 cut(s) | 106 |
| ErhI | CCWWGG | 2 cut(s) | 864, 1171 |
| FaqI | GGGAC | 2 cut(s) | 63, 169 |
| FauNDI | CATATG | 1 cut(s) | 1327 |
| Fnu4HI | GCNGC | 4 cut(s) | 201, 359, 1078, 1276 |
| FokI | GGATG | 6 cut(s) | 77, 226, 443, 581, 924, 1473 |
| Fsp4HI | GCNGC | 4 cut(s) | 201, 359, 1078, 1276 |
| FspBI | CTAG | 4 cut(s) | 27, 369, 513, 909 |
| GlaI | GCGC | 5 cut(s) | 106, 188, 734, 1076, 1304 |
| GluI | GCNGC | 4 cut(s) | 201, 359, 1078, 1276 |
| HaeII | RGCGCY | 3 cut(s) | 108, 190, 736 |
| HaeIII | GGCC | 5 cut(s) | 218, 471, 1008, 1165, 1362 |
| HapII | CCGG | 3 cut(s) | 934, 958, 1632 |
| HgaI | GACGC | 1 cut(s) | 250 |
| HhaI | GCGC | 5 cut(s) | 107, 189, 735, 1077, 1305 |
| Hin1I | GRCGYC | 2 cut(s) | 105, 261 |
| Hin6I | GCGC | 5 cut(s) | 105, 187, 733, 1075, 1303 |
| HinP1I | GCGC | 5 cut(s) | 105, 187, 733, 1075, 1303 |
| HinfI | GANTC | 9 cut(s) | 52, 381, 544, 677, 709, 811, 902, 1087, 1481 |
| HpaII | CCGG | 3 cut(s) | 934, 958, 1632 |
| HphI | GGTGA | 1 cut(s) | 1160 |
| Hpy166II | GTNNAC | 1 cut(s) | 1544 |
| Hpy188I | TCNGA | 9 cut(s) | 33, 352, 440, 639, 708, 1098, 1384, 1468, 1615 |
| Hpy188III | TCNNGA | 9 cut(s) | 251, 464, 548, 899, 1153, 1184, 1283, 1448, 1499 |
| Hpy8I | GTNNAC | 1 cut(s) | 1544 |
| Hpy99I | CGWCG | 1 cut(s) | 1122 |
| HpyAV | CCTTC | 6 cut(s) | 59, 282, 461, 540, 1101, 1220 |
| HpyCH4III | ACNGT | 3 cut(s) | 227, 856, 872 |
| HpyCH4IV | ACGT | 1 cut(s) | 975 |
| HpyCH4V | TGCA | 9 cut(s) | 398, 450, 572, 838, 889, 994, 1343, 1488, 1608 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 739, 1043, 1368, 1605 |
| HpyF3I | CTNAG | 8 cut(s) | 183, 502, 636, 1095, 1185, 1196, 1383, 1465 |
| HpySE526I | ACGT | 1 cut(s) | 975 |
| Hsp92I | GRCGYC | 2 cut(s) | 105, 261 |
| HspAI | GCGC | 5 cut(s) | 105, 187, 733, 1075, 1303 |
| KasI | GGCGCC | 1 cut(s) | 104 |
| Kzo9I | GATC | 2 cut(s) | 352, 763 |
| LmnI | GCTCC | 4 cut(s) | 823, 1034, 1333, 1351 |
| Lsp1109I | GCAGC | 4 cut(s) | 187, 345, 1089, 1287 |
| LweI | GCATC | 7 cut(s) | 157, 247, 432, 559, 946, 970, 1451 |
| MaeI | CTAG | 4 cut(s) | 27, 369, 513, 909 |
| MaeII | ACGT | 1 cut(s) | 975 |
| MaeIII | GTNAC | 5 cut(s) | 262, 321, 574, 850, 1177 |
| MalI | GATC | 2 cut(s) | 354, 765 |
| MbiI | CCGCTC | 1 cut(s) | 949 |
| MboI | GATC | 2 cut(s) | 352, 763 |
| MhlI | GDGCHC | 1 cut(s) | 1601 |
| MlsI | TGGCCA | 1 cut(s) | 1362 |
| MluCI | AATT | 8 cut(s) | 481, 618, 718, 1018, 1356, 1392, 1438, 1504 |
| MluNI | TGGCCA | 1 cut(s) | 1362 |
| Mly113I | GGCGCC | 1 cut(s) | 105 |
| MlyI | GAGTC | 1 cut(s) | 390 |
| MmeI | TCCRAC | 2 cut(s) | 300, 741 |
| Mox20I | TGGCCA | 1 cut(s) | 1362 |
| Mph1103I | ATGCAT | 1 cut(s) | 840 |
| MscI | TGGCCA | 1 cut(s) | 1362 |
| MseI | TTAA | 7 cut(s) | 495, 773, 1001, 1017, 1395, 1443, 1568 |
| MslI | CAYNNNNRTG | 1 cut(s) | 884 |
| Msp20I | TGGCCA | 1 cut(s) | 1362 |
| MspA1I | CMGCKG | 2 cut(s) | 358, 746 |
| MspI | CCGG | 3 cut(s) | 934, 958, 1632 |
| MspR9I | CCNGG | 5 cut(s) | 477, 808, 1031, 1128, 1633 |
| MvaI | CCWGG | 4 cut(s) | 477, 808, 1031, 1128 |
| MvnI | CGCG | 2 cut(s) | 1075, 1518 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 739, 1043, 1368, 1605 |
| NarI | GGCGCC | 1 cut(s) | 105 |
| NciI | CCSGG | 1 cut(s) | 1633 |
| NcoI | CCATGG | 1 cut(s) | 864 |
| NdeI | CATATG | 1 cut(s) | 1327 |
| NdeII | GATC | 2 cut(s) | 352, 763 |
| NlaIV | GGNNCC | 4 cut(s) | 106, 157, 862, 1036 |
| NmuCI | GTSAC | 2 cut(s) | 262, 850 |
| NsiI | ATGCAT | 1 cut(s) | 840 |
| NspI | RCATGY | 3 cut(s) | 19, 1303, 1324 |
| NspV | TTCGAA | 1 cut(s) | 533 |
| PagI | TCATGA | 1 cut(s) | 898 |
| PasI | CCCWGGG | 1 cut(s) | 1030 |
| PceI | AGGCCT | 2 cut(s) | 471, 1165 |
| PciI | ACATGT | 1 cut(s) | 1320 |
| PfeI | GAWTC | 8 cut(s) | 52, 544, 677, 709, 811, 902, 1087, 1481 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1145 |
| PkrI | GCNGC | 4 cut(s) | 202, 360, 1079, 1277 |
| PleI | GAGTC | 1 cut(s) | 389 |
| PluTI | GGCGCC | 1 cut(s) | 108 |
| PpsI | GAGTC | 1 cut(s) | 389 |
| Ppu21I | YACGTR | 1 cut(s) | 976 |
| PpuMI | RGGWCCY | 1 cut(s) | 632 |
| PscI | ACATGT | 1 cut(s) | 1320 |
| PsiI | TTATAA | 1 cut(s) | 1509 |
| Psp5II | RGGWCCY | 1 cut(s) | 632 |
| Psp6I | CCWGG | 4 cut(s) | 475, 806, 1029, 1126 |
| PspGI | CCWGG | 4 cut(s) | 475, 806, 1029, 1126 |
| PspN4I | GGNNCC | 4 cut(s) | 106, 157, 862, 1036 |
| PspPI | GGNCC | 4 cut(s) | 156, 217, 443, 632 |
| PspPPI | RGGWCCY | 1 cut(s) | 632 |
| PstI | CTGCAG | 1 cut(s) | 400 |
| PvuII | CAGCTG | 1 cut(s) | 746 |
| RsaI | GTAC | 2 cut(s) | 224, 293 |
| RsaNI | GTAC | 2 cut(s) | 223, 292 |
| RseI | CAYNNNNRTG | 1 cut(s) | 884 |
| SaqAI | TTAA | 7 cut(s) | 495, 773, 1001, 1017, 1395, 1443, 1568 |
| SatI | GCNGC | 4 cut(s) | 201, 359, 1078, 1276 |
| Sau3AI | GATC | 2 cut(s) | 352, 763 |
| Sau96I | GGNCC | 4 cut(s) | 156, 217, 443, 632 |
| SchI | GAGTC | 1 cut(s) | 390 |
| ScrFI | CCNGG | 5 cut(s) | 477, 808, 1031, 1128, 1633 |
| SduI | GDGCHC | 1 cut(s) | 1601 |
| SfaNI | GCATC | 7 cut(s) | 157, 247, 432, 559, 946, 970, 1451 |
| SfcI | CTRYAG | 2 cut(s) | 396, 855 |
| SfoI | GGCGCC | 1 cut(s) | 106 |
| SfuI | TTCGAA | 1 cut(s) | 533 |
| SinI | GGWCC | 3 cut(s) | 156, 443, 632 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 884 |
| SmlI | CTYRAG | 1 cut(s) | 1219 |
| SmoI | CTYRAG | 1 cut(s) | 1219 |
| Sse9I | AATT | 8 cut(s) | 481, 618, 718, 1018, 1356, 1392, 1438, 1504 |
| SseBI | AGGCCT | 2 cut(s) | 471, 1165 |
| SsiI | CCGC | 3 cut(s) | 356, 947, 986 |
| SspDI | GGCGCC | 1 cut(s) | 104 |
| SspI | AATATT | 3 cut(s) | 130, 491, 826 |
| SspMI | CTAG | 4 cut(s) | 27, 369, 513, 909 |
| StuI | AGGCCT | 2 cut(s) | 471, 1165 |
| StyD4I | CCNGG | 5 cut(s) | 475, 806, 1029, 1126, 1631 |
| StyI | CCWWGG | 2 cut(s) | 864, 1171 |
| TaaI | ACNGT | 3 cut(s) | 227, 856, 872 |
| TaiI | ACGT | 1 cut(s) | 978 |
| TaqI | TCGA | 3 cut(s) | 165, 308, 533 |
| TasI | AATT | 8 cut(s) | 481, 618, 718, 1018, 1356, 1392, 1438, 1504 |
| TatI | WGTACW | 1 cut(s) | 222 |
| TfiI | GAWTC | 8 cut(s) | 52, 544, 677, 709, 811, 902, 1087, 1481 |
| Tru1I | TTAA | 7 cut(s) | 495, 773, 1001, 1017, 1395, 1443, 1568 |
| Tru9I | TTAA | 7 cut(s) | 495, 773, 1001, 1017, 1395, 1443, 1568 |
| TscAI | CASTG | 5 cut(s) | 232, 528, 859, 877, 1378 |
| TseFI | GTSAC | 2 cut(s) | 262, 850 |
| TseI | GCWGC | 4 cut(s) | 200, 358, 1077, 1275 |
| Tsp45I | GTSAC | 2 cut(s) | 262, 850 |
| TspDTI | ATGAA | 5 cut(s) | 65, 894, 1038, 1100, 1526 |
| TspRI | CASTG | 5 cut(s) | 232, 528, 859, 877, 1378 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1145 |
| VpaK11BI | GGWCC | 3 cut(s) | 156, 443, 632 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1170 |
| XapI | RAATTY | 2 cut(s) | 481, 1438 |
| XceI | RCATGY | 3 cut(s) | 19, 1303, 1324 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 1370 |
| XspI | CTAG | 4 cut(s) | 27, 369, 513, 909 |
| Zsp2I | ATGCAT | 1 cut(s) | 840 |