Prupe.4G218200_v2.0.a1

protein dimerization activity

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
Physical Location & Seq
Forward (+)
13719441 .. 13720708
1268 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G218200.2

Sequence Viewer

Length: 255 bp
ATGGTGTGGGATCACTGTACAAAAATTAGAAAGAATGATGATACGGGGTTTGAGAGAATAATTGGGGCTTGCAATTATTACAAAGCAGAGATGCCGGCGAATCCCAAGAGAAATGGGACAACCGGGTTGAAAACTCACTTAGAAAGGAGGTGCAAGGTACTCATATCTATAAATATAAAAAAAGGTAATGCAAACCAATCGATGCTAGCACAAGAGGGGGGGGGGGGGGGGGGGCAAGTAGTGCTTACAAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

85

Amino Acids

9.19

Weight (kDa)

9.55

Isoelectric Point (pI)

44.43

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0018004)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AclWI GGATC 1 cut(s) 18
AfaI GTAC 2 cut(s) 19, 159
AgsI TTSAA 1 cut(s) 130
AlwI GGATC 1 cut(s) 18
AsuC2I CCSGG 1 cut(s) 124
AsuNHI GCTAGC 1 cut(s) 205
BcgI CGANNNNNNTGC 2 cut(s) 180, 214
BcnI CCSGG 1 cut(s) 124
BfaI CTAG 1 cut(s) 206
Bme1390I CCNGG 1 cut(s) 124
BmrFI CCNGG 1 cut(s) 124
BmsI GCATC 2 cut(s) 81, 192
BmtI GCTAGC 1 cut(s) 209
BpuMI CCSGG 1 cut(s) 124
Bsa29I ATCGAT 1 cut(s) 200
Bse118I RCCGGY 1 cut(s) 94
BseCI ATCGAT 1 cut(s) 200
BshVI ATCGAT 1 cut(s) 200
BsiSI CCGG 2 cut(s) 95, 123
BslFI GGGAC 1 cut(s) 130
BsmFI GGGAC 1 cut(s) 130
Bsp1407I TGTACA 1 cut(s) 17
Bsp143I GATC 1 cut(s) 10
BspDI ATCGAT 1 cut(s) 200
BspOI GCTAGC 1 cut(s) 209
BspPI GGATC 1 cut(s) 18
BsrFI RCCGGY 1 cut(s) 94
BsrGI TGTACA 1 cut(s) 17
BssAI RCCGGY 1 cut(s) 94
BssMI GATC 1 cut(s) 10
Bst4CI ACNGT 1 cut(s) 17
BstAPI GCANNNNNTGC 1 cut(s) 241
BstAUI TGTACA 1 cut(s) 17
BstC8I GCNNGC 3 cut(s) 70, 96, 207
BstDEI CTNAG 1 cut(s) 139
BstKTI GATC 1 cut(s) 13
BstMBI GATC 1 cut(s) 10
BstMWI GCNNNNNNNGC 1 cut(s) 241
BstSCI CCNGG 1 cut(s) 122
Bsu15I ATCGAT 1 cut(s) 200
BsuTUI ATCGAT 1 cut(s) 200
BtsIMutI CAGTG 1 cut(s) 13
Cac8I GCNNGC 3 cut(s) 70, 96, 207
Cfr10I RCCGGY 1 cut(s) 94
ClaI ATCGAT 1 cut(s) 200
Csp6I GTAC 2 cut(s) 18, 158
CviJI RGCY 1 cut(s) 68
CviKI_1 RGCY 1 cut(s) 68
CviQI GTAC 2 cut(s) 18, 158
DdeI CTNAG 1 cut(s) 139
DpnI GATC 1 cut(s) 12
DpnII GATC 1 cut(s) 10
FaiI YATR 3 cut(s) 164, 170, 176
FalI AAGNNNNNCTT 1 cut(s) 228
FaqI GGGAC 1 cut(s) 130
FspBI CTAG 1 cut(s) 206
HapII CCGG 2 cut(s) 95, 123
HinfI GANTC 1 cut(s) 100
HpaII CCGG 2 cut(s) 95, 123
HpyCH4III ACNGT 1 cut(s) 17
HpyCH4V TGCA 3 cut(s) 72, 153, 191
HpyF10VI GCNNNNNNNGC 1 cut(s) 241
HpyF3I CTNAG 1 cut(s) 139
KroI GCCGGC 1 cut(s) 94
KroNI GCCGGC 1 cut(s) 96
Kzo9I GATC 1 cut(s) 10
LpnPI CCDG 2 cut(s) 108, 136
LweI GCATC 2 cut(s) 81, 192
MaeI CTAG 1 cut(s) 206
MalI GATC 1 cut(s) 12
MboI GATC 1 cut(s) 10
MluCI AATT 3 cut(s) 24, 60, 73
MnlI CCTC 2 cut(s) 141, 208
MroNI GCCGGC 1 cut(s) 94
MspI CCGG 2 cut(s) 95, 123
MspR9I CCNGG 1 cut(s) 124
MwoI GCNNNNNNNGC 1 cut(s) 241
NaeI GCCGGC 1 cut(s) 96
NciI CCSGG 1 cut(s) 124
NdeII GATC 1 cut(s) 10
NgoMIV GCCGGC 1 cut(s) 94
NheI GCTAGC 1 cut(s) 205
PdiI GCCGGC 1 cut(s) 96
PfeI GAWTC 1 cut(s) 100
RsaI GTAC 2 cut(s) 19, 159
RsaNI GTAC 2 cut(s) 18, 158
Sau3AI GATC 1 cut(s) 10
ScrFI CCNGG 1 cut(s) 124
SetI ASST 3 cut(s) 152, 159, 187
SfaNI GCATC 2 cut(s) 81, 192
Sse9I AATT 3 cut(s) 24, 60, 73
SspMI CTAG 1 cut(s) 206
StyD4I CCNGG 1 cut(s) 122
TaaI ACNGT 1 cut(s) 17
TaqI TCGA 1 cut(s) 200
TasI AATT 3 cut(s) 24, 60, 73
TatI WGTACW 1 cut(s) 17
TfiI GAWTC 1 cut(s) 100
TscAI CASTG 1 cut(s) 20
TspRI CASTG 1 cut(s) 20
XspI CTAG 1 cut(s) 206
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.