Cotton fibre expressed protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_3g23270 |
| malus_domestica | MD03G1195800.v1.1 MD11G1212200.v1.1 |
| prunus_persica | Prupe.4G220200_v2.0.a1 Prupe.4G220300_v2.0.a1 |
| rosa_chinensis | RchiOBHm_Chr5g0040991 |
| rosa_laevigata | RLG00000034018 |
| rosa_roxburghii | Rroxscaffold_1G00039710 |
| rosa_rugosa | Rorug05G0189300 |
| rosa_samantha | Rh5AG274500 Rh5BG279800 Rh5CG311900 Rh5DG287800 |
| rosa_wichuraiana | Rw5G025860 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 78 |
| AcsI | RAATTY | 1 cut(s) | 215 |
| AcuI | CTGAAG | 2 cut(s) | 159, 195 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 555 |
| AgsI | TTSAA | 3 cut(s) | 14, 344, 577 |
| AluBI | AGCT | 2 cut(s) | 529, 542 |
| AluI | AGCT | 2 cut(s) | 529, 542 |
| Alw21I | GWGCWC | 1 cut(s) | 142 |
| Alw26I | GTCTC | 1 cut(s) | 539 |
| AoxI | GGCC | 1 cut(s) | 148 |
| ApoI | RAATTY | 1 cut(s) | 215 |
| BbsI | GAAGAC | 1 cut(s) | 597 |
| Bbv12I | GWGCWC | 1 cut(s) | 142 |
| BclI | TGATCA | 1 cut(s) | 445 |
| BcoDI | GTCTC | 1 cut(s) | 539 |
| BfaI | CTAG | 3 cut(s) | 29, 351, 414 |
| BmiI | GGNNCC | 1 cut(s) | 274 |
| BmsI | GCATC | 2 cut(s) | 89, 570 |
| BpiI | GAAGAC | 1 cut(s) | 597 |
| BsaI | GGTCTC | 1 cut(s) | 539 |
| BsaJI | CCNNGG | 1 cut(s) | 133 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 555 |
| Bse118I | RCCGGY | 1 cut(s) | 146 |
| Bse3DI | GCAATG | 1 cut(s) | 60 |
| BseDI | CCNNGG | 1 cut(s) | 133 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 555 |
| BseMI | GCAATG | 1 cut(s) | 60 |
| BseMII | CTCAG | 3 cut(s) | 35, 100, 534 |
| BseRI | GAGGAG | 2 cut(s) | 110, 214 |
| BshFI | GGCC | 1 cut(s) | 150 |
| BsiHKAI | GWGCWC | 1 cut(s) | 142 |
| BsiSI | CCGG | 1 cut(s) | 147 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 555 |
| BsmAI | GTCTC | 1 cut(s) | 539 |
| BsnI | GGCC | 1 cut(s) | 150 |
| Bso31I | GGTCTC | 1 cut(s) | 539 |
| Bsp1286I | GDGCHC | 1 cut(s) | 142 |
| Bsp143I | GATC | 3 cut(s) | 353, 445, 454 |
| BspACI | CCGC | 1 cut(s) | 78 |
| BspANI | GGCC | 1 cut(s) | 150 |
| BspCNI | CTCAG | 3 cut(s) | 34, 99, 535 |
| BspHI | TCATGA | 2 cut(s) | 457, 610 |
| BspLI | GGNNCC | 1 cut(s) | 274 |
| BspTNI | GGTCTC | 1 cut(s) | 539 |
| BsrDI | GCAATG | 1 cut(s) | 60 |
| BsrFI | RCCGGY | 1 cut(s) | 146 |
| BssAI | RCCGGY | 1 cut(s) | 146 |
| BssECI | CCNNGG | 1 cut(s) | 133 |
| BssMI | GATC | 3 cut(s) | 353, 445, 454 |
| Bst4CI | ACNGT | 2 cut(s) | 376, 389 |
| Bst6I | CTCTTC | 1 cut(s) | 45 |
| BstC8I | GCNNGC | 2 cut(s) | 148, 370 |
| BstDEI | CTNAG | 3 cut(s) | 21, 86, 543 |
| BstKTI | GATC | 3 cut(s) | 356, 448, 457 |
| BstMAI | GTCTC | 1 cut(s) | 539 |
| BstMBI | GATC | 3 cut(s) | 353, 445, 454 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 137 |
| BstV2I | GAAGAC | 1 cut(s) | 597 |
| BsuRI | GGCC | 1 cut(s) | 150 |
| BtsIMutI | CAGTG | 2 cut(s) | 372, 394 |
| Cac8I | GCNNGC | 2 cut(s) | 148, 370 |
| CciI | TCATGA | 2 cut(s) | 457, 610 |
| Cfr10I | RCCGGY | 1 cut(s) | 146 |
| CviAII | CATG | 4 cut(s) | 458, 479, 597, 611 |
| CviJI | RGCY | 8 cut(s) | 146, 150, 209, 417, 443, 529, 542, 629 |
| CviKI_1 | RGCY | 8 cut(s) | 146, 150, 209, 417, 443, 529, 542, 629 |
| DdeI | CTNAG | 3 cut(s) | 21, 86, 543 |
| DpnI | GATC | 3 cut(s) | 355, 447, 456 |
| DpnII | GATC | 3 cut(s) | 353, 445, 454 |
| Eam1104I | CTCTTC | 1 cut(s) | 45 |
| EarI | CTCTTC | 1 cut(s) | 45 |
| Eco31I | GGTCTC | 1 cut(s) | 539 |
| Eco57I | CTGAAG | 2 cut(s) | 159, 195 |
| FaeI | CATG | 4 cut(s) | 461, 482, 600, 614 |
| FaiI | YATR | 8 cut(s) | 183, 206, 410, 428, 459, 480, 598, 612 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 135, 167 |
| FatI | CATG | 4 cut(s) | 457, 478, 596, 610 |
| FbaI | TGATCA | 1 cut(s) | 445 |
| FspBI | CTAG | 3 cut(s) | 29, 351, 414 |
| HaeIII | GGCC | 1 cut(s) | 150 |
| HapII | CCGG | 1 cut(s) | 147 |
| Hin1II | CATG | 4 cut(s) | 461, 482, 600, 614 |
| HinfI | GANTC | 3 cut(s) | 25, 593, 607 |
| HpaII | CCGG | 1 cut(s) | 147 |
| Hpy188III | TCNNGA | 4 cut(s) | 351, 394, 458, 611 |
| HpyAV | CCTTC | 5 cut(s) | 161, 183, 322, 328, 414 |
| HpyCH4III | ACNGT | 2 cut(s) | 376, 389 |
| HpyCH4V | TGCA | 2 cut(s) | 65, 583 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 137 |
| HpyF3I | CTNAG | 3 cut(s) | 21, 86, 543 |
| Hsp92II | CATG | 4 cut(s) | 461, 482, 600, 614 |
| KroI | GCCGGC | 1 cut(s) | 146 |
| KroNI | GCCGGC | 1 cut(s) | 148 |
| Ksp22I | TGATCA | 1 cut(s) | 445 |
| Kzo9I | GATC | 3 cut(s) | 353, 445, 454 |
| LmnI | GCTCC | 1 cut(s) | 137 |
| LpnPI | CCDG | 3 cut(s) | 160, 185, 354 |
| LweI | GCATC | 2 cut(s) | 89, 570 |
| MaeI | CTAG | 3 cut(s) | 29, 351, 414 |
| MalI | GATC | 3 cut(s) | 355, 447, 456 |
| MboI | GATC | 3 cut(s) | 353, 445, 454 |
| MhlI | GDGCHC | 1 cut(s) | 142 |
| MluCI | AATT | 3 cut(s) | 215, 465, 513 |
| MlyI | GAGTC | 1 cut(s) | 587 |
| MmeI | TCCRAC | 1 cut(s) | 192 |
| MroNI | GCCGGC | 1 cut(s) | 146 |
| MseI | TTAA | 1 cut(s) | 634 |
| MspI | CCGG | 1 cut(s) | 147 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 137 |
| NaeI | GCCGGC | 1 cut(s) | 148 |
| NdeII | GATC | 3 cut(s) | 353, 445, 454 |
| NgoMIV | GCCGGC | 1 cut(s) | 146 |
| NlaIII | CATG | 4 cut(s) | 461, 482, 600, 614 |
| NlaIV | GGNNCC | 1 cut(s) | 274 |
| PagI | TCATGA | 2 cut(s) | 457, 610 |
| PdiI | GCCGGC | 1 cut(s) | 148 |
| PfeI | GAWTC | 2 cut(s) | 25, 607 |
| PflFI | GACNNNGTC | 1 cut(s) | 389 |
| PleI | GAGTC | 1 cut(s) | 587 |
| PpsI | GAGTC | 1 cut(s) | 587 |
| PspN4I | GGNNCC | 1 cut(s) | 274 |
| PsyI | GACNNNGTC | 1 cut(s) | 389 |
| SaqAI | TTAA | 1 cut(s) | 634 |
| Sau3AI | GATC | 3 cut(s) | 353, 445, 454 |
| SchI | GAGTC | 1 cut(s) | 587 |
| SduI | GDGCHC | 1 cut(s) | 142 |
| SfaNI | GCATC | 2 cut(s) | 89, 570 |
| Sse9I | AATT | 3 cut(s) | 215, 465, 513 |
| SsiI | CCGC | 1 cut(s) | 78 |
| SspMI | CTAG | 3 cut(s) | 29, 351, 414 |
| TaaI | ACNGT | 2 cut(s) | 376, 389 |
| TasI | AATT | 3 cut(s) | 215, 465, 513 |
| TfiI | GAWTC | 2 cut(s) | 25, 607 |
| Tru1I | TTAA | 1 cut(s) | 634 |
| Tru9I | TTAA | 1 cut(s) | 634 |
| TscAI | CASTG | 2 cut(s) | 379, 394 |
| TspDTI | ATGAA | 5 cut(s) | 17, 270, 415, 495, 599 |
| TspRI | CASTG | 2 cut(s) | 379, 394 |
| Tth111I | GACNNNGTC | 1 cut(s) | 389 |
| XapI | RAATTY | 1 cut(s) | 215 |
| XbaI | TCTAGA | 1 cut(s) | 350 |
| XspI | CTAG | 3 cut(s) | 29, 351, 414 |