Prupe.4G223400_v2.0.a1

Mitochondrial pyruvate carrier

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0005252
Physical Location & Seq
Reverse (-)
14022532 .. 14025586
3055 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G223400.1

Sequence Viewer

Length: 327 bp
ATGGCAGCTTCAAAGGTCCAAGCTTTCTGGAACCACCCAGCAGGCCCTAAAACCATTCACTTTTGGGCTCCAACTTTTAAATGGGGCATTAGCATAGCAAATATTGCTGATTTCTCAAAGCCACCTGAAAATATCTCTTATCCTCAGCAAATAGCTGTTACGTGCACTGGGCTTATTTGGTCTCGTTACAGTATGGTGATTACTCCGAAAAACTGGAATCTTTTTAGTGTTAATGTTGCAATGGCTGGGACAGGCTTGGCTCAATTGTCACGCAAAATAACGCATGACTACTTTTCCGACACAGACGCAGCTGTACAAAAAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
MPC

Protein Analysis

109

Amino Acids

12.03

Weight (kDa)

9.21

Isoelectric Point (pI)

27.45

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AfaI GTAC 1 cut(s) 315
AgsI TTSAA 1 cut(s) 12
AluBI AGCT 4 cut(s) 8, 23, 155, 311
AluI AGCT 4 cut(s) 8, 23, 155, 311
Alw21I GWGCWC 1 cut(s) 167
Alw26I GTCTC 1 cut(s) 186
Alw44I GTGCAC 1 cut(s) 163
AoxI GGCC 1 cut(s) 43
ApaLI GTGCAC 1 cut(s) 163
ApeKI GCWGC 2 cut(s) 5, 308
AspS9I GGNCC 2 cut(s) 16, 44
AsuHPI GGTGA 1 cut(s) 208
AvaII GGWCC 1 cut(s) 16
BaeGI GKGCMC 1 cut(s) 167
BanII GRGCYC 1 cut(s) 70
Bbv12I GWGCWC 1 cut(s) 167
BbvCI CCTCAGC 1 cut(s) 144
BbvI GCAGC 2 cut(s) 17, 320
BcoDI GTCTC 1 cut(s) 186
BisI GCNGC 2 cut(s) 6, 309
BlsI GCNGC 2 cut(s) 7, 310
Bme18I GGWCC 1 cut(s) 16
BmgT120I GGNCC 2 cut(s) 16, 44
BmiI GGNNCC 2 cut(s) 32, 69
BmrI ACTGGG 1 cut(s) 177
BmuI ACTGGG 1 cut(s) 177
Bpu10I CCTNAGC 1 cut(s) 144
BsaAI YACGTR 1 cut(s) 162
BsaI GGTCTC 1 cut(s) 186
Bse1I ACTGG 2 cut(s) 172, 218
Bse3DI GCAATG 1 cut(s) 246
BseMI GCAATG 1 cut(s) 246
BseMII CTCAG 1 cut(s) 158
BseNI ACTGG 2 cut(s) 172, 218
BseSI GKGCMC 1 cut(s) 167
BseXI GCAGC 2 cut(s) 17, 320
BseYI CCCAGC 2 cut(s) 37, 245
BshFI GGCC 1 cut(s) 45
BsiHKAI GWGCWC 1 cut(s) 167
BslFI GGGAC 1 cut(s) 262
BsmAI GTCTC 1 cut(s) 186
BsmFI GGGAC 1 cut(s) 262
BsnI GGCC 1 cut(s) 45
Bso31I GGTCTC 1 cut(s) 186
Bsp1286I GDGCHC 2 cut(s) 70, 167
Bsp1407I TGTACA 1 cut(s) 313
BspANI GGCC 1 cut(s) 45
BspCNI CTCAG 1 cut(s) 157
BspLI GGNNCC 2 cut(s) 32, 69
BspTNI GGTCTC 1 cut(s) 186
BsrDI GCAATG 1 cut(s) 246
BsrGI TGTACA 1 cut(s) 313
BsrI ACTGG 2 cut(s) 172, 218
Bst4CI ACNGT 1 cut(s) 191
BstAPI GCANNNNNTGC 1 cut(s) 104
BstAUI TGTACA 1 cut(s) 313
BstBAI YACGTR 1 cut(s) 162
BstC8I GCNNGC 1 cut(s) 43
BstDEI CTNAG 1 cut(s) 144
BstMAI GTCTC 1 cut(s) 186
BstMWI GCNNNNNNNGC 1 cut(s) 104
BstSLI GKGCMC 1 cut(s) 167
BstV1I GCAGC 2 cut(s) 17, 320
BsuRI GGCC 1 cut(s) 45
BtsIMutI CAGTG 1 cut(s) 165
Cac8I GCNNGC 1 cut(s) 43
Cfr13I GGNCC 2 cut(s) 16, 44
CseI GACGC 1 cut(s) 314
Csp6I GTAC 1 cut(s) 314
CviAII CATG 1 cut(s) 284
CviQI GTAC 1 cut(s) 314
DdeI CTNAG 1 cut(s) 144
DraI TTTAAA 1 cut(s) 79
Eco24I GRGCYC 1 cut(s) 70
Eco31I GGTCTC 1 cut(s) 186
Eco47I GGWCC 1 cut(s) 16
EcoO109I RGGNCCY 1 cut(s) 44
EcoT38I GRGCYC 1 cut(s) 70
FaeI CATG 1 cut(s) 287
FaiI YATR 3 cut(s) 95, 194, 285
FaqI GGGAC 1 cut(s) 262
FatI CATG 1 cut(s) 283
Fnu4HI GCNGC 2 cut(s) 6, 309
FriOI GRGCYC 1 cut(s) 70
Fsp4HI GCNGC 2 cut(s) 6, 309
GluI GCNGC 2 cut(s) 6, 309
GsaI CCCAGC 2 cut(s) 41, 249
HaeIII GGCC 1 cut(s) 45
HgaI GACGC 1 cut(s) 314
Hin1II CATG 1 cut(s) 287
HindIII AAGCTT 1 cut(s) 21
HinfI GANTC 1 cut(s) 217
HphI GGTGA 1 cut(s) 208
Hpy166II GTNNAC 1 cut(s) 165
Hpy188I TCNGA 2 cut(s) 207, 298
Hpy188III TCNNGA 1 cut(s) 28
Hpy8I GTNNAC 1 cut(s) 165
HpyCH4III ACNGT 1 cut(s) 191
HpyCH4IV ACGT 1 cut(s) 161
HpyCH4V TGCA 2 cut(s) 165, 239
HpyF10VI GCNNNNNNNGC 1 cut(s) 104
HpyF3I CTNAG 1 cut(s) 144
HpySE526I ACGT 1 cut(s) 161
Hsp92II CATG 1 cut(s) 287
LmnI GCTCC 1 cut(s) 73
LpnPI CCDG 8 cut(s) 13, 27, 51, 138, 153, 199, 231, 237
Lsp1109I GCAGC 2 cut(s) 17, 320
MaeII ACGT 1 cut(s) 161
MaeIII GTNAC 3 cut(s) 157, 185, 267
MfeI CAATTG 1 cut(s) 263
MhlI GDGCHC 2 cut(s) 70, 167
MluCI AATT 1 cut(s) 263
MmeI TCCRAC 2 cut(s) 95, 321
MnlI CCTC 1 cut(s) 153
MseI TTAA 2 cut(s) 78, 231
MspA1I CMGCKG 1 cut(s) 311
MunI CAATTG 1 cut(s) 263
MwoI GCNNNNNNNGC 1 cut(s) 104
NlaIII CATG 1 cut(s) 287
NlaIV GGNNCC 2 cut(s) 32, 69
NmuCI GTSAC 1 cut(s) 267
PfeI GAWTC 1 cut(s) 217
PkrI GCNGC 2 cut(s) 7, 310
Ppu21I YACGTR 1 cut(s) 162
PspFI CCCAGC 2 cut(s) 37, 245
PspN4I GGNNCC 2 cut(s) 32, 69
PspPI GGNCC 2 cut(s) 16, 44
PvuII CAGCTG 1 cut(s) 311
RsaI GTAC 1 cut(s) 315
RsaNI GTAC 1 cut(s) 314
SaqAI TTAA 2 cut(s) 78, 231
SatI GCNGC 2 cut(s) 6, 309
Sau96I GGNCC 2 cut(s) 16, 44
SduI GDGCHC 2 cut(s) 70, 167
SetI ASST 7 cut(s) 10, 18, 25, 127, 157, 164, 313
SinI GGWCC 1 cut(s) 16
Sse9I AATT 1 cut(s) 263
SspI AATATT 1 cut(s) 103
TaaI ACNGT 1 cut(s) 191
TaiI ACGT 1 cut(s) 164
TasI AATT 1 cut(s) 263
TatI WGTACW 1 cut(s) 313
TfiI GAWTC 1 cut(s) 217
Tru1I TTAA 2 cut(s) 78, 231
Tru9I TTAA 2 cut(s) 78, 231
TscAI CASTG 1 cut(s) 172
TseFI GTSAC 1 cut(s) 267
TseI GCWGC 2 cut(s) 5, 308
Tsp45I GTSAC 1 cut(s) 267
TspRI CASTG 1 cut(s) 172
VneI GTGCAC 1 cut(s) 163
VpaK11BI GGWCC 1 cut(s) 16
XcmI CCANNNNNNNNNTGG 1 cut(s) 78
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.