Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0005252

Physical Location & Seq

Genomic Coordinates Forward (+)

48472809 .. 48477459

Gene Structure 4651 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0331900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGGGTTTAATGCGGTTTTTAGCTCCTTGAAGGAGGTTTTTCCCCAGGTTGATTTTCGTGTTCTGAAAGCTGTTGCTATAGAAAATTCTAATGATCTTGACGCAGCTGTCAATGATGTGCTGAATGAGGTTCTCCCTTTCTTGACCAAACATCCTGAGAGTCCTGCAAAGGTTCAGACTCCTAGCAGCCAACCAACTGCAGTTGAACCTGAGGAGCAGAGTAAAGAATTAAATCACCAGCAGGTAGTTAAGGAAGTAGAGGTTGAGTCTTTTCCAGCAGCAAGATCCACTGATGTTGACAATGCCAACACTACTGATCAAACAGAATTTACAAGTGGTGCCTCCCATGAGGTTTGTACACTGGTAGATGATACAAATTCATCACAGAATCTCCTTGCCTCTTCAGATGGAGATCAAGCAACTGGGCATGATGAACAAGAATTTGTGAACACTGGAAGTGAAGAACTGGAGCGACGTGGAAAGAAGATTAATGAGGATGATGACACTTTCATATTGCCAGAGGGGGTAGAAACATTTCTGAGTGATACTCAGCTTTATACTGAAACAACAGCAGCTGGTAATGTCGAAGCTGGGCTTCAGCAGTCTTCATCTGGAATGGCAACCAGTTCAGTACATGAAAAAGAGGGGGTTCATGACGGCTTGGTCAATGTGCCCTATGAATGGAAAGATTTTGATTTTTCTCAGACTGATGATCTGTCTCTGTTGGAGGGTGAAAGTTCTATTGTTCAGCTGGATCCTCCTTTTCCAGAACATGCAACAGAAACTGTCCTTTCCAAGGAAGACGAGTCTTTCTGTAATATGGCTGATATGAAGGAGTCCACCACGAATAGCATATGCAATATTGATGTTCTTGAAGAGAGCATTGAAGATGCTAAACATAACAAGAGAACATTGTTTTCAGCCATGGAGTCTGTTATCACCATGATGAGAGAAGTGGAACTGGAAGAGAAAGCTGTGGATCGTGTCACAGAGGAAGCCGCAAGGGGAGGTCAGGATATTATGGTTAAGGTGGAGGAACTAAAACTGATGTTGGCACATGCGAAGGATGCAAATGACATGCATGCTGGTGAAGTTTATGGGGAGAAGGCAATTTTAGCAACTGAAGTTAGAGAGCTTCAATGTCGATTGCTCAGTTTGTCAGATGAAAGGGATAAGTCACTTGCAATCCTTGACGAGATGCGTGAAACACTTGAAGCACGACTAACTGGAGTTGCAGAGTTGAGAAAAATGGCCGAGGATGAAAAGCTAGAAAAGGAAGAATCTGCACGGAAAGCTCTTGCTGAACAAGAAACCATCATGGAGAAAGTGGTTGAGGAGTCGAAGACACTGCAACAGGCAGCGGAGGAAAATTCCAAGTTGCGGGAGTTTCTGATGGACCGTGGCCACATTGTAGATATGCTACAAGGAGAAATCTCTGTAATTTGTCAGGATGTCAAGTTGCTGAAAGAGAAGTTTGATGATCGTGTTCCTCTAAGCCAGTCTGTTTCATCTAGCCAGACAAGTTGCATCTTAGCTTCTTCAGGCTCATCCTTGAAAAGCGCGGCATCTGACTTGCTTCTAGAACGAGTTGGGTCAGTTGGGTCATCTGAGTCACCAAAGACCATAGAGAGGGCAAGTCCTGTTGCTTCAGTTGACGGTCTCTCACCAAAATACAGACTAGAAGATAAAACAGTCAAGGTCGATAAACAAGCTCTTATGGCCGATGGGTGGGATGTCTTTGACGAAGATCTCTTGGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0008150 GO:0009314 GO:0009411 GO:0009416 GO:0009507 GO:0009526 GO:0009536 GO:0009628 GO:0009941 GO:0010224 GO:0031967 GO:0031975 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0050896

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF647

Protein Analysis

586

Amino Acids

64.63

Weight (kDa)

4.41

Isoelectric Point (pI)

48.51

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
CUE	PF02845	5 - 42	5.7e-06	CUE domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005252)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G14695 AT4G14695 AT4G14695 AT4G22310
fragaria_vesca	FvH4_2g37250
malus_domestica	MD03G1193700.v1.1 MD05G1356700.v1.1 MD10G1329800.v1.1
prunus_persica	Prupe.4G012300_v2.0.a1 Prupe.4G223400_v2.0.a1
pyrus_communis	pycom05g32270 pycom10g27950
rosa_chinensis	RchiOBHm_Chr6g0304451 RchiOBHm_Chr6g0304471
rosa_laevigata	RLG00000010974 RLG00000010976
rosa_roxburghii	Rroxscaffold_7G00163720
rosa_rugosa	Rorug06G0331900 Rorug06G0332000
rosa_samantha	Rh6AG444600 Rh6AG444800 Rh6BG457600 Rh6BG457800 Rh6CG457400 Rh6CG457500 Rh6DG444100 Rh6DG444300
rosa_wichuraiana	Rw6G038600 Rw6G038610

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	107, 662
Acc36I	ACCTGC	1 cut(s)	232
AccB1I	GGYRCC	1 cut(s)	338
AccII	CGCG	1 cut(s)	1562
AciI	CCGC	5 cut(s)	14, 999, 1361, 1381, 1562
AclWI	GGATC	4 cut(s)	279, 749, 762, 987
AcoI	YGGCCR	3 cut(s)	1251, 1402, 1719
AcsI	RAATTY	5 cut(s)	85, 326, 376, 440, 1369
AcuI	CTGAAG	5 cut(s)	387, 581, 1143, 1524, 1632
AfaI	GTAC	2 cut(s)	358, 633
AfiI	CCNNNNNNNGG	5 cut(s)	681, 796, 1380, 1629, 1728
AgsI	TTSAA	7 cut(s)	31, 206, 875, 887, 1139, 1214, 1555
AjiI	CACGTC	1 cut(s)	476
AjnI	CCWGG	1 cut(s)	45
Alw26I	GTCTC	2 cut(s)	723, 1664
AlwI	GGATC	4 cut(s)	279, 749, 762, 987
AlwNI	CAGNNNCTG	2 cut(s)	575, 785
AoxI	GGCC	3 cut(s)	1251, 1402, 1719
ApeKI	GCWGC	5 cut(s)	104, 186, 278, 572, 1358
ApoI	RAATTY	5 cut(s)	85, 326, 376, 440, 1369
AseI	ATTAAT	1 cut(s)	489
Asp700I	GAANNNNTTC	1 cut(s)	534
AspLEI	GCGC	1 cut(s)	1562
AspS9I	GGNCC	1 cut(s)	1396
AsuHPI	GGTGA	6 cut(s)	227, 743, 931, 1100, 1605, 1656
AvaII	GGWCC	1 cut(s)	1396
AxyI	CCTNAGG	1 cut(s)	210
BaeGI	GKGCMC	1 cut(s)	675
BalI	TGGCCA	1 cut(s)	1404
BamHI	GGATCC	1 cut(s)	754
BanI	GGYRCC	1 cut(s)	338
BbsI	GAAGAC	3 cut(s)	597, 807, 1349
BbvI	GCAGC	5 cut(s)	116, 198, 290, 584, 1370
BccI	CCATC	4 cut(s)	401, 1322, 1387, 1718
BceAI	ACGGC	1 cut(s)	673
BcgI	CGANNNNNNTGC	2 cut(s)	1330, 1364
BciT130I	CCWGG	1 cut(s)	47
BclI	TGATCA	1 cut(s)	316
BcoDI	GTCTC	2 cut(s)	723, 1664
BfaI	CTAG	5 cut(s)	183, 1268, 1512, 1580, 1679
BfmI	CTRYAG	2 cut(s)	78, 198
BfuAI	ACCTGC	1 cut(s)	232
BglII	AGATCT	1 cut(s)	1747
BisI	GCNGC	7 cut(s)	105, 187, 279, 573, 999, 1359, 1563
BlsI	GCNGC	7 cut(s)	106, 188, 280, 574, 1000, 1360, 1564
Bme1390I	CCNGG	1 cut(s)	47
Bme18I	GGWCC	1 cut(s)	1396
BmgBI	CACGTC	1 cut(s)	476
BmgT120I	GGNCC	1 cut(s)	1396
BmiI	GGNNCC	2 cut(s)	340, 756
BmrFI	CCNGG	1 cut(s)	47
BmrI	ACTGGG	1 cut(s)	432
BmsI	GCATC	5 cut(s)	880, 1057, 1188, 1536, 1574
BmuI	ACTGGG	1 cut(s)	432
BpiI	GAAGAC	3 cut(s)	597, 807, 1349
BplI	GAGNNNNNCTC	2 cut(s)	532, 564
BpmI	CTGGAG	2 cut(s)	488, 1248
BsaBI	GATNNNNATC	1 cut(s)	411
BsaI	GGTCTC	1 cut(s)	1664
BsaJI	CCNNGG	5 cut(s)	45, 795, 924, 1254, 1399
BsaXI	ACNNNNNCTCC	2 cut(s)	375, 405
Bsc4I	CCNNNNNNNGG	5 cut(s)	681, 796, 1380, 1629, 1728
Bse1I	ACTGG	8 cut(s)	366, 427, 457, 471, 624, 966, 1231, 1498
Bse21I	CCTNAGG	1 cut(s)	210
Bse8I	GATNNNNATC	1 cut(s)	411
BseBI	CCWGG	1 cut(s)	47
BseDI	CCNNGG	5 cut(s)	45, 795, 924, 1254, 1399
BseGI	GGATG	7 cut(s)	151, 502, 1072, 1264, 1456, 1547, 1738
BseJI	GATNNNNATC	1 cut(s)	411
BseLI	CCNNNNNNNGG	5 cut(s)	681, 796, 1380, 1629, 1728
BseMII	CTCAG	7 cut(s)	147, 201, 530, 563, 716, 1165, 1599
BseNI	ACTGG	8 cut(s)	366, 427, 457, 471, 624, 966, 1231, 1498
BseRI	GAGGAG	2 cut(s)	227, 1349
BseSI	GKGCMC	1 cut(s)	675
BseXI	GCAGC	5 cut(s)	116, 198, 290, 584, 1370
BseYI	CCCAGC	1 cut(s)	590
BsgI	GTGCAG	1 cut(s)	1269
Bsh1236I	CGCG	1 cut(s)	1562
BshFI	GGCC	3 cut(s)	1253, 1404, 1721
BshNI	GGYRCC	1 cut(s)	338
BslI	CCNNNNNNNGG	5 cut(s)	681, 796, 1380, 1629, 1728
BsmAI	GTCTC	2 cut(s)	723, 1664
BsnI	GGCC	3 cut(s)	1253, 1404, 1721
Bso31I	GGTCTC	1 cut(s)	1664
Bsp1286I	GDGCHC	1 cut(s)	675
Bsp1407I	TGTACA	1 cut(s)	356
Bsp143I	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
Bsp19I	CCATGG	1 cut(s)	924
BspACI	CCGC	5 cut(s)	14, 999, 1361, 1381, 1562
BspANI	GGCC	3 cut(s)	1253, 1404, 1721
BspCNI	CTCAG	7 cut(s)	148, 202, 531, 562, 715, 1164, 1600
BspFNI	CGCG	1 cut(s)	1562
BspHI	TCATGA	1 cut(s)	652
BspLI	GGNNCC	2 cut(s)	340, 756
BspMAI	CTGCAG	1 cut(s)	202
BspMI	ACCTGC	1 cut(s)	232
BspPI	GGATC	4 cut(s)	279, 749, 762, 987
BspT107I	GGYRCC	1 cut(s)	338
BspTNI	GGTCTC	1 cut(s)	1664
BsrGI	TGTACA	1 cut(s)	356
BsrI	ACTGG	8 cut(s)	366, 427, 457, 471, 624, 966, 1231, 1498
BssECI	CCNNGG	5 cut(s)	45, 795, 924, 1254, 1399
BssMI	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
BssT1I	CCWWGG	2 cut(s)	795, 924
Bst2UI	CCWGG	1 cut(s)	47
Bst4CI	ACNGT	4 cut(s)	787, 1400, 1658, 1693
Bst6I	CTCTTC	3 cut(s)	406, 870, 960
BstAUI	TGTACA	1 cut(s)	356
BstC8I	GCNNGC	1 cut(s)	1083
BstDEI	CTNAG	9 cut(s)	156, 210, 539, 549, 702, 1151, 1493, 1531, 1608
BstDSI	CCRYGG	2 cut(s)	924, 1399
BstENI	CCTNNNNNAGG	1 cut(s)	794
BstF5I	GGATG	7 cut(s)	151, 502, 1072, 1264, 1456, 1547, 1738
BstFNI	CGCG	1 cut(s)	1562
BstHHI	GCGC	1 cut(s)	1562
BstKTI	GATC	9 cut(s)	97, 287, 319, 415, 715, 757, 982, 1483, 1750
BstMAI	GTCTC	2 cut(s)	723, 1664
BstMBI	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
BstMWI	GCNNNNNNNGC	4 cut(s)	1067, 1115, 1292, 1718
BstNI	CCWGG	1 cut(s)	47
BstNSI	RCATGY	4 cut(s)	776, 1061, 1081, 1085
BstSCI	CCNGG	1 cut(s)	45
BstSFI	CTRYAG	2 cut(s)	78, 198
BstSLI	GKGCMC	1 cut(s)	675
BstUI	CGCG	1 cut(s)	1562
BstV1I	GCAGC	5 cut(s)	116, 198, 290, 584, 1370
BstV2I	GAAGAC	3 cut(s)	597, 807, 1349
BstX2I	RGATCY	3 cut(s)	284, 754, 1747
BstYI	RGATCY	3 cut(s)	284, 754, 1747
Bsu36I	CCTNAGG	1 cut(s)	210
BsuRI	GGCC	3 cut(s)	1253, 1404, 1721
BtgI	CCRYGG	2 cut(s)	924, 1399
BtrI	CACGTC	1 cut(s)	476
BtsCI	GGATG	7 cut(s)	151, 502, 1072, 1264, 1456, 1547, 1738
BtsI	GCAGTG	1 cut(s)	1346
BtsIMutI	CAGTG	4 cut(s)	288, 359, 450, 1346
BveI	ACCTGC	1 cut(s)	232
Cac8I	GCNNGC	1 cut(s)	1083
CaiI	CAGNNNCTG	2 cut(s)	575, 785
CciI	TCATGA	1 cut(s)	652
CfoI	GCGC	1 cut(s)	1562
Cfr13I	GGNCC	1 cut(s)	1396
CseI	GACGC	1 cut(s)	110
Csp6I	GTAC	2 cut(s)	357, 632
CspCI	CAANNNNNGTGG	2 cut(s)	277, 312
CviQI	GTAC	2 cut(s)	357, 632
DdeI	CTNAG	9 cut(s)	156, 210, 539, 549, 702, 1151, 1493, 1531, 1608
DpnI	GATC	9 cut(s)	96, 286, 318, 414, 714, 756, 981, 1482, 1749
DpnII	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
DrdI	GACNNNNNNGTC	2 cut(s)	107, 662
DseDI	GACNNNNNNGTC	2 cut(s)	107, 662
EaeI	YGGCCR	3 cut(s)	1251, 1402, 1719
Eam1104I	CTCTTC	3 cut(s)	406, 870, 960
EarI	CTCTTC	3 cut(s)	406, 870, 960
Eco130I	CCWWGG	2 cut(s)	795, 924
Eco31I	GGTCTC	1 cut(s)	1664
Eco47I	GGWCC	1 cut(s)	1396
Eco57I	CTGAAG	5 cut(s)	387, 581, 1143, 1524, 1632
Eco81I	CCTNAGG	1 cut(s)	210
EcoNI	CCTNNNNNAGG	1 cut(s)	794
EcoRII	CCWGG	1 cut(s)	45
EcoT14I	CCWWGG	2 cut(s)	795, 924
EcoT22I	ATGCAT	1 cut(s)	1083
ErhI	CCWWGG	2 cut(s)	795, 924
FalI	AAGNNNNNCTT	2 cut(s)	579, 611
FauI	CCCGC	1 cut(s)	1374
FauNDI	CATATG	1 cut(s)	854
FbaI	TGATCA	1 cut(s)	316
Fnu4HI	GCNGC	7 cut(s)	105, 187, 279, 573, 999, 1359, 1563
FokI	GGATG	7 cut(s)	138, 509, 1079, 1271, 1463, 1534, 1745
Fsp4HI	GCNGC	7 cut(s)	105, 187, 279, 573, 999, 1359, 1563
FspBI	CTAG	5 cut(s)	183, 1268, 1512, 1580, 1679
GlaI	GCGC	1 cut(s)	1561
GluI	GCNGC	7 cut(s)	105, 187, 279, 573, 999, 1359, 1563
GsaI	CCCAGC	1 cut(s)	594
GsuI	CTGGAG	2 cut(s)	488, 1248
HaeIII	GGCC	3 cut(s)	1253, 1404, 1721
HgaI	GACGC	1 cut(s)	110
HhaI	GCGC	1 cut(s)	1562
Hin6I	GCGC	1 cut(s)	1560
HinP1I	GCGC	1 cut(s)	1560
HincII	GTYRAC	2 cut(s)	298, 1654
HindII	GTYRAC	2 cut(s)	298, 1654
HphI	GGTGA	6 cut(s)	227, 743, 931, 1100, 1605, 1656
Hpy166II	GTNNAC	5 cut(s)	298, 359, 448, 840, 1654
Hpy188I	TCNGA	9 cut(s)	66, 177, 406, 540, 705, 1162, 1392, 1570, 1609
Hpy8I	GTNNAC	5 cut(s)	298, 359, 448, 840, 1654
Hpy99I	CGWCG	1 cut(s)	477
HpyAV	CCTTC	4 cut(s)	25, 826, 1057, 1099
HpyCH4III	ACNGT	4 cut(s)	787, 1400, 1658, 1693
HpyCH4IV	ACGT	1 cut(s)	475
HpyF10VI	GCNNNNNNNGC	4 cut(s)	1067, 1115, 1292, 1718
HpyF3I	CTNAG	9 cut(s)	156, 210, 539, 549, 702, 1151, 1493, 1531, 1608
HpySE526I	ACGT	1 cut(s)	475
HspAI	GCGC	1 cut(s)	1560
Ksp22I	TGATCA	1 cut(s)	316
Kzo9I	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
LmnI	GCTCC	3 cut(s)	29, 214, 469
Lsp1109I	GCAGC	5 cut(s)	116, 198, 290, 584, 1370
LweI	GCATC	5 cut(s)	880, 1057, 1188, 1536, 1574
MaeI	CTAG	5 cut(s)	183, 1268, 1512, 1580, 1679
MaeII	ACGT	1 cut(s)	475
MaeIII	GTNAC	3 cut(s)	985, 1176, 1611
MalI	GATC	9 cut(s)	96, 286, 318, 414, 714, 756, 981, 1482, 1749
MboI	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
MflI	RGATCY	3 cut(s)	284, 754, 1747
MhlI	GDGCHC	1 cut(s)	675
MlsI	TGGCCA	1 cut(s)	1404
MluCI	AATT	8 cut(s)	85, 227, 326, 376, 440, 1110, 1369, 1440
MluNI	TGGCCA	1 cut(s)	1404
MlyI	GAGTC	8 cut(s)	169, 172, 275, 815, 845, 938, 1346, 1619
MmeI	TCCRAC	1 cut(s)	705
Mox20I	TGGCCA	1 cut(s)	1404
Mph1103I	ATGCAT	1 cut(s)	1083
MroXI	GAANNNNTTC	1 cut(s)	534
MscI	TGGCCA	1 cut(s)	1404
MseI	TTAA	5 cut(s)	9, 230, 249, 489, 1026
MslI	CAYNNNNRTG	2 cut(s)	944, 1086
Msp20I	TGGCCA	1 cut(s)	1404
MspA1I	CMGCKG	4 cut(s)	107, 575, 751, 1361
MspR9I	CCNGG	1 cut(s)	47
MvaI	CCWGG	1 cut(s)	47
MvnI	CGCG	1 cut(s)	1562
MwoI	GCNNNNNNNGC	4 cut(s)	1067, 1115, 1292, 1718
NcoI	CCATGG	1 cut(s)	924
NdeI	CATATG	1 cut(s)	854
NdeII	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
NlaIV	GGNNCC	2 cut(s)	340, 756
NmeAIII	GCCGAG	1 cut(s)	1279
NmuCI	GTSAC	3 cut(s)	985, 1176, 1611
NsiI	ATGCAT	1 cut(s)	1083
NspI	RCATGY	4 cut(s)	776, 1061, 1081, 1085
PaeI	GCATGC	1 cut(s)	1085
PagI	TCATGA	1 cut(s)	652
PdmI	GAANNNNTTC	1 cut(s)	534
PfeI	GAWTC	2 cut(s)	388, 1280
PkrI	GCNGC	7 cut(s)	106, 188, 280, 574, 1000, 1360, 1564
PleI	GAGTC	8 cut(s)	168, 172, 274, 814, 844, 937, 1345, 1618
PpsI	GAGTC	8 cut(s)	168, 172, 274, 814, 844, 937, 1345, 1618
PshBI	ATTAAT	1 cut(s)	489
Psp6I	CCWGG	1 cut(s)	45
PspFI	CCCAGC	1 cut(s)	590
PspGI	CCWGG	1 cut(s)	45
PspN4I	GGNNCC	2 cut(s)	340, 756
PspPI	GGNCC	1 cut(s)	1396
PstI	CTGCAG	1 cut(s)	202
PstNI	CAGNNNCTG	2 cut(s)	575, 785
PsuI	RGATCY	3 cut(s)	284, 754, 1747
PvuII	CAGCTG	3 cut(s)	107, 575, 751
RsaI	GTAC	2 cut(s)	358, 633
RsaNI	GTAC	2 cut(s)	357, 632
RseI	CAYNNNNRTG	2 cut(s)	944, 1086
SaqAI	TTAA	5 cut(s)	9, 230, 249, 489, 1026
SatI	GCNGC	7 cut(s)	105, 187, 279, 573, 999, 1359, 1563
Sau3AI	GATC	9 cut(s)	94, 284, 316, 412, 712, 754, 979, 1480, 1747
Sau96I	GGNCC	1 cut(s)	1396
SchI	GAGTC	8 cut(s)	169, 172, 275, 815, 845, 938, 1346, 1619
ScrFI	CCNGG	1 cut(s)	47
SduI	GDGCHC	1 cut(s)	675
SfaNI	GCATC	5 cut(s)	880, 1057, 1188, 1536, 1574
SfcI	CTRYAG	2 cut(s)	78, 198
SinI	GGWCC	1 cut(s)	1396
SmiMI	CAYNNNNRTG	2 cut(s)	944, 1086
SphI	GCATGC	1 cut(s)	1085
Sse9I	AATT	8 cut(s)	85, 227, 326, 376, 440, 1110, 1369, 1440
SsiI	CCGC	5 cut(s)	14, 999, 1361, 1381, 1562
SspI	AATATT	1 cut(s)	862
SspMI	CTAG	5 cut(s)	183, 1268, 1512, 1580, 1679
StyD4I	CCNGG	1 cut(s)	45
StyI	CCWWGG	2 cut(s)	795, 924
TaaI	ACNGT	4 cut(s)	787, 1400, 1658, 1693
TaiI	ACGT	1 cut(s)	478
TaqI	TCGA	4 cut(s)	585, 1144, 1340, 1701
TasI	AATT	8 cut(s)	85, 227, 326, 376, 440, 1110, 1369, 1440
TatI	WGTACW	2 cut(s)	356, 631
TauI	GCSGC	2 cut(s)	1001, 1565
TfiI	GAWTC	2 cut(s)	388, 1280
Tru1I	TTAA	5 cut(s)	9, 230, 249, 489, 1026
Tru9I	TTAA	5 cut(s)	9, 230, 249, 489, 1026
TscAI	CASTG	4 cut(s)	295, 366, 457, 1353
TseFI	GTSAC	3 cut(s)	985, 1176, 1611
TseI	GCWGC	5 cut(s)	104, 186, 278, 572, 1358
Tsp45I	GTSAC	3 cut(s)	985, 1176, 1611
TspGWI	ACGGA	1 cut(s)	1303
TspRI	CASTG	4 cut(s)	295, 366, 457, 1353
VpaK11BI	GGWCC	1 cut(s)	1396
VspI	ATTAAT	1 cut(s)	489
XagI	CCTNNNNNAGG	1 cut(s)	794
XapI	RAATTY	5 cut(s)	85, 326, 376, 440, 1369
XbaI	TCTAGA	1 cut(s)	1579
XceI	RCATGY	4 cut(s)	776, 1061, 1081, 1085
XmnI	GAANNNNTTC	1 cut(s)	534
XspI	CTAG	5 cut(s)	183, 1268, 1512, 1580, 1679
Zsp2I	ATGCAT	1 cut(s)	1083

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.