Belongs to the CGI121 TPRKB family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34412 |
| fragaria_vesca | FvH4_2g06110 FvH4_2g06110 FvH4_2g06110 FvH4_2g06110 |
| malus_domestica | MD05G1080500.v1.1 MD10G1094500.v1.1 |
| prunus_persica | Prupe.2G172700_v2.0.a1 Prupe.4G258000_v2.0.a1 Prupe.4G259300_v2.0.a1 Prupe.6G016400_v2.0.a1 Prupe.8G124200_v2.0.a1 Prupe.8G124200_v2.0.a1 Prupe.8G124200_v2.0.a1 |
| pyrus_communis | pycom10g07800 |
| rosa_chinensis | RchiOBHm_Chr6g0257111 |
| rosa_laevigata | RLG00000014676 |
| rosa_multiflora | Rmu_sc0000659.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00208500 |
| rosa_rugosa | Rorug05G0575300 |
| rosa_samantha | Rh6AG093300 Rh6BG084100 Rh6CG080700 Rh6DG076100 |
| rosa_wichuraiana | Rw6G008020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AclWI | GGATC | 2 cut(s) | 108, 121 |
| AgsI | TTSAA | 1 cut(s) | 139 |
| AluBI | AGCT | 4 cut(s) | 17, 79, 94, 162 |
| AluI | AGCT | 4 cut(s) | 17, 79, 94, 162 |
| Alw26I | GTCTC | 2 cut(s) | 37, 45 |
| AlwI | GGATC | 2 cut(s) | 108, 121 |
| ApeKI | GCWGC | 1 cut(s) | 79 |
| BamHI | GGATCC | 1 cut(s) | 113 |
| BbvI | GCAGC | 1 cut(s) | 66 |
| BcoDI | GTCTC | 2 cut(s) | 37, 45 |
| BfaI | CTAG | 1 cut(s) | 303 |
| BisI | GCNGC | 1 cut(s) | 80 |
| BlsI | GCNGC | 1 cut(s) | 81 |
| BmiI | GGNNCC | 1 cut(s) | 115 |
| BmsI | GCATC | 2 cut(s) | 159, 325 |
| BpuEI | CTTGAG | 1 cut(s) | 19 |
| BsaI | GGTCTC | 1 cut(s) | 45 |
| BseRI | GAGGAG | 1 cut(s) | 263 |
| BseXI | GCAGC | 1 cut(s) | 66 |
| BsmAI | GTCTC | 2 cut(s) | 37, 45 |
| Bso31I | GGTCTC | 1 cut(s) | 45 |
| Bsp143I | GATC | 1 cut(s) | 113 |
| BspLI | GGNNCC | 1 cut(s) | 115 |
| BspPI | GGATC | 2 cut(s) | 108, 121 |
| BspTNI | GGTCTC | 1 cut(s) | 45 |
| BssMI | GATC | 1 cut(s) | 113 |
| Bst6I | CTCTTC | 1 cut(s) | 55 |
| BstC8I | GCNNGC | 1 cut(s) | 177 |
| BstKTI | GATC | 1 cut(s) | 116 |
| BstMAI | GTCTC | 2 cut(s) | 37, 45 |
| BstMBI | GATC | 1 cut(s) | 113 |
| BstV1I | GCAGC | 1 cut(s) | 66 |
| BstX2I | RGATCY | 1 cut(s) | 113 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 19 |
| BstYI | RGATCY | 1 cut(s) | 113 |
| Cac8I | GCNNGC | 1 cut(s) | 177 |
| CviAII | CATG | 1 cut(s) | 307 |
| CviJI | RGCY | 5 cut(s) | 17, 79, 94, 162, 275 |
| CviKI_1 | RGCY | 5 cut(s) | 17, 79, 94, 162, 275 |
| DpnI | GATC | 1 cut(s) | 115 |
| DpnII | GATC | 1 cut(s) | 113 |
| Eam1104I | CTCTTC | 1 cut(s) | 55 |
| EarI | CTCTTC | 1 cut(s) | 55 |
| Eco31I | GGTCTC | 1 cut(s) | 45 |
| Eco32I | GATATC | 1 cut(s) | 321 |
| EcoRV | GATATC | 1 cut(s) | 321 |
| FaeI | CATG | 1 cut(s) | 310 |
| FaiI | YATR | 5 cut(s) | 90, 123, 171, 294, 308 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 151, 183 |
| FatI | CATG | 1 cut(s) | 306 |
| Fnu4HI | GCNGC | 1 cut(s) | 80 |
| Fsp4HI | GCNGC | 1 cut(s) | 80 |
| FspBI | CTAG | 1 cut(s) | 303 |
| GluI | GCNGC | 1 cut(s) | 80 |
| Hin1II | CATG | 1 cut(s) | 310 |
| HinfI | GANTC | 2 cut(s) | 30, 131 |
| Hpy166II | GTNNAC | 1 cut(s) | 100 |
| Hpy188I | TCNGA | 2 cut(s) | 157, 202 |
| Hpy188III | TCNNGA | 2 cut(s) | 57, 111 |
| Hpy8I | GTNNAC | 1 cut(s) | 100 |
| Hsp92II | CATG | 1 cut(s) | 310 |
| Kzo9I | GATC | 1 cut(s) | 113 |
| LmnI | GCTCC | 1 cut(s) | 76 |
| LpnPI | CCDG | 5 cut(s) | 12, 25, 35, 58, 96 |
| Lsp1109I | GCAGC | 1 cut(s) | 66 |
| LweI | GCATC | 2 cut(s) | 159, 325 |
| MaeI | CTAG | 1 cut(s) | 303 |
| MaeIII | GTNAC | 1 cut(s) | 22 |
| MalI | GATC | 1 cut(s) | 115 |
| MboI | GATC | 1 cut(s) | 113 |
| MboII | GAAGA | 4 cut(s) | 72, 186, 189, 315 |
| MflI | RGATCY | 1 cut(s) | 113 |
| MluCI | AATT | 3 cut(s) | 103, 190, 311 |
| MlyI | GAGTC | 1 cut(s) | 39 |
| MnlI | CCTC | 3 cut(s) | 56, 241, 251 |
| MseI | TTAA | 1 cut(s) | 189 |
| NdeII | GATC | 1 cut(s) | 113 |
| NlaIII | CATG | 1 cut(s) | 310 |
| NlaIV | GGNNCC | 1 cut(s) | 115 |
| NmuCI | GTSAC | 1 cut(s) | 22 |
| PfeI | GAWTC | 1 cut(s) | 131 |
| PkrI | GCNGC | 1 cut(s) | 81 |
| PleI | GAGTC | 1 cut(s) | 38 |
| PpsI | GAGTC | 1 cut(s) | 38 |
| PspN4I | GGNNCC | 1 cut(s) | 115 |
| PsuI | RGATCY | 1 cut(s) | 113 |
| SaqAI | TTAA | 1 cut(s) | 189 |
| SatI | GCNGC | 1 cut(s) | 80 |
| Sau3AI | GATC | 1 cut(s) | 113 |
| SchI | GAGTC | 1 cut(s) | 39 |
| SetI | ASST | 6 cut(s) | 19, 41, 81, 96, 164, 262 |
| SfaNI | GCATC | 2 cut(s) | 159, 325 |
| SmlI | CTYRAG | 1 cut(s) | 34 |
| SmoI | CTYRAG | 1 cut(s) | 34 |
| Sse9I | AATT | 3 cut(s) | 103, 190, 311 |
| SspMI | CTAG | 1 cut(s) | 303 |
| TasI | AATT | 3 cut(s) | 103, 190, 311 |
| TfiI | GAWTC | 1 cut(s) | 131 |
| Tru1I | TTAA | 1 cut(s) | 189 |
| Tru9I | TTAA | 1 cut(s) | 189 |
| TseFI | GTSAC | 1 cut(s) | 22 |
| TseI | GCWGC | 1 cut(s) | 79 |
| Tsp45I | GTSAC | 1 cut(s) | 22 |
| TspDTI | ATGAA | 1 cut(s) | 74 |
| XspI | CTAG | 1 cut(s) | 303 |