Belongs to the CGI121 TPRKB family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G34412 |
| fragaria_vesca | FvH4_2g06110 FvH4_2g06110 FvH4_2g06110 FvH4_2g06110 |
| malus_domestica | MD05G1080500.v1.1 MD10G1094500.v1.1 |
| prunus_persica | Prupe.2G172700_v2.0.a1 Prupe.4G258000_v2.0.a1 Prupe.4G259300_v2.0.a1 Prupe.6G016400_v2.0.a1 Prupe.8G124200_v2.0.a1 Prupe.8G124200_v2.0.a1 Prupe.8G124200_v2.0.a1 |
| pyrus_communis | pycom10g07800 |
| rosa_chinensis | RchiOBHm_Chr6g0257111 |
| rosa_laevigata | RLG00000014676 |
| rosa_multiflora | Rmu_sc0000659.1_g000005 |
| rosa_roxburghii | Rroxscaffold_7G00208500 |
| rosa_rugosa | Rorug05G0575300 |
| rosa_samantha | Rh6AG093300 Rh6BG084100 Rh6CG080700 Rh6DG076100 |
| rosa_wichuraiana | Rw6G008020 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccBSI | CCGCTC | 1 cut(s) | 92 |
| AciI | CCGC | 1 cut(s) | 90 |
| AclWI | GGATC | 2 cut(s) | 18, 31 |
| AcuI | CTGAAG | 1 cut(s) | 132 |
| AgsI | TTSAA | 1 cut(s) | 49 |
| AluBI | AGCT | 1 cut(s) | 72 |
| AluI | AGCT | 1 cut(s) | 72 |
| Alw21I | GWGCWC | 1 cut(s) | 120 |
| AlwI | GGATC | 2 cut(s) | 18, 31 |
| BamHI | GGATCC | 1 cut(s) | 23 |
| Bbv12I | GWGCWC | 1 cut(s) | 120 |
| BfaI | CTAG | 2 cut(s) | 132, 143 |
| BmiI | GGNNCC | 1 cut(s) | 25 |
| BmsI | GCATC | 2 cut(s) | 69, 154 |
| BsiHKAI | GWGCWC | 1 cut(s) | 120 |
| Bsp1286I | GDGCHC | 1 cut(s) | 120 |
| Bsp143I | GATC | 1 cut(s) | 23 |
| BspACI | CCGC | 1 cut(s) | 90 |
| BspLI | GGNNCC | 1 cut(s) | 25 |
| BspPI | GGATC | 2 cut(s) | 18, 31 |
| BspQI | GCTCTTC | 1 cut(s) | 108 |
| BsrBI | CCGCTC | 1 cut(s) | 92 |
| BssMI | GATC | 1 cut(s) | 23 |
| Bst6I | CTCTTC | 1 cut(s) | 108 |
| BstKTI | GATC | 1 cut(s) | 26 |
| BstMBI | GATC | 1 cut(s) | 23 |
| BstX2I | RGATCY | 1 cut(s) | 23 |
| BstYI | RGATCY | 1 cut(s) | 23 |
| CviJI | RGCY | 1 cut(s) | 72 |
| CviKI_1 | RGCY | 1 cut(s) | 72 |
| DpnI | GATC | 1 cut(s) | 25 |
| DpnII | GATC | 1 cut(s) | 23 |
| Eam1104I | CTCTTC | 1 cut(s) | 108 |
| EarI | CTCTTC | 1 cut(s) | 108 |
| Eco32I | GATATC | 1 cut(s) | 150 |
| Eco57I | CTGAAG | 1 cut(s) | 132 |
| EcoRV | GATATC | 1 cut(s) | 150 |
| FaiI | YATR | 3 cut(s) | 33, 81, 123 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 61, 93 |
| FspBI | CTAG | 2 cut(s) | 132, 143 |
| FspEI | CC | 7 cut(s) | 6, 40, 42, 103, 122, 129, 130 |
| HindIII | AAGCTT | 1 cut(s) | 70 |
| HinfI | GANTC | 1 cut(s) | 41 |
| Hpy166II | GTNNAC | 1 cut(s) | 10 |
| Hpy188I | TCNGA | 2 cut(s) | 67, 112 |
| Hpy188III | TCNNGA | 1 cut(s) | 21 |
| Hpy8I | GTNNAC | 1 cut(s) | 10 |
| Kzo9I | GATC | 1 cut(s) | 23 |
| LguI | GCTCTTC | 1 cut(s) | 108 |
| LpnPI | CCDG | 1 cut(s) | 6 |
| LweI | GCATC | 2 cut(s) | 69, 154 |
| MaeI | CTAG | 2 cut(s) | 132, 143 |
| MalI | GATC | 1 cut(s) | 25 |
| MbiI | CCGCTC | 1 cut(s) | 92 |
| MboI | GATC | 1 cut(s) | 23 |
| MboII | GAAGA | 3 cut(s) | 99, 125, 144 |
| MflI | RGATCY | 1 cut(s) | 23 |
| MhlI | GDGCHC | 1 cut(s) | 120 |
| MluCI | AATT | 1 cut(s) | 13 |
| MseI | TTAA | 1 cut(s) | 99 |
| MslI | CAYNNNNRTG | 1 cut(s) | 99 |
| NdeII | GATC | 1 cut(s) | 23 |
| NlaIV | GGNNCC | 1 cut(s) | 25 |
| PciSI | GCTCTTC | 1 cut(s) | 108 |
| PfeI | GAWTC | 1 cut(s) | 41 |
| PspN4I | GGNNCC | 1 cut(s) | 25 |
| PsuI | RGATCY | 1 cut(s) | 23 |
| RseI | CAYNNNNRTG | 1 cut(s) | 99 |
| SapI | GCTCTTC | 1 cut(s) | 108 |
| SaqAI | TTAA | 1 cut(s) | 99 |
| Sau3AI | GATC | 1 cut(s) | 23 |
| SduI | GDGCHC | 1 cut(s) | 120 |
| SetI | ASST | 1 cut(s) | 74 |
| SfaNI | GCATC | 2 cut(s) | 69, 154 |
| SgeI | CNNG | 8 cut(s) | 17, 33, 40, 85, 144, 148, 155, 170 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 99 |
| Sse9I | AATT | 1 cut(s) | 13 |
| SsiI | CCGC | 1 cut(s) | 90 |
| SspMI | CTAG | 2 cut(s) | 132, 143 |
| TasI | AATT | 1 cut(s) | 13 |
| TfiI | GAWTC | 1 cut(s) | 41 |
| Tru1I | TTAA | 1 cut(s) | 99 |
| Tru9I | TTAA | 1 cut(s) | 99 |
| XspI | CTAG | 2 cut(s) | 132, 143 |