Domain of unknown function (DUF4228)
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12340 AT5G12340 |
| fragaria_vesca | FvH4_3g27940 |
| malus_domestica | MD03G1167500.v1.1 MD11G1186400.v1.1 |
| prunus_persica | Prupe.4G267600_v2.0.a1 |
| pyrus_communis | pycom03g12270 pycom11g16110 |
| rosa_chinensis | RchiOBHm_Chr5g0050661 |
| rosa_laevigata | RLG00000034716 |
| rosa_multiflora | Rmu_ssc0000350.1_g000037 Rmu_ssc0000350.1_g000038 |
| rosa_roxburghii | Rroxscaffold_1G00030140 |
| rosa_rugosa | Rorug05G0262800 |
| rosa_samantha | Rh5AG334800 Rh5BG344100 Rh5CG371900 Rh5DG357200 |
| rosa_wichuraiana | Rw5G031580 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 3 cut(s) | 149, 279, 443 |
| AcoI | YGGCCR | 1 cut(s) | 166 |
| AcsI | RAATTY | 1 cut(s) | 590 |
| AfaI | GTAC | 1 cut(s) | 347 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 178 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 498, 530 |
| AluBI | AGCT | 6 cut(s) | 47, 104, 202, 419, 511, 547 |
| AluI | AGCT | 6 cut(s) | 47, 104, 202, 419, 511, 547 |
| Alw21I | GWGCWC | 1 cut(s) | 204 |
| Alw26I | GTCTC | 1 cut(s) | 21 |
| AoxI | GGCC | 3 cut(s) | 166, 264, 440 |
| ApoI | RAATTY | 1 cut(s) | 590 |
| AseI | ATTAAT | 1 cut(s) | 321 |
| AspS9I | GGNCC | 2 cut(s) | 256, 440 |
| AsuC2I | CCSGG | 1 cut(s) | 179 |
| AsuHPI | GGTGA | 1 cut(s) | 573 |
| AsuII | TTCGAA | 1 cut(s) | 359 |
| AvaII | GGWCC | 1 cut(s) | 256 |
| AxyI | CCTNAGG | 1 cut(s) | 283 |
| BanII | GRGCYC | 1 cut(s) | 204 |
| Bbv12I | GWGCWC | 1 cut(s) | 204 |
| BclI | TGATCA | 1 cut(s) | 375 |
| BcnI | CCSGG | 1 cut(s) | 179 |
| BcoDI | GTCTC | 1 cut(s) | 21 |
| BfaI | CTAG | 2 cut(s) | 453, 459 |
| BisI | GCNGC | 2 cut(s) | 279, 443 |
| BlsI | GCNGC | 2 cut(s) | 280, 444 |
| Bme1390I | CCNGG | 1 cut(s) | 179 |
| Bme18I | GGWCC | 1 cut(s) | 256 |
| BmgT120I | GGNCC | 2 cut(s) | 256, 440 |
| BmiI | GGNNCC | 4 cut(s) | 73, 257, 289, 315 |
| BmrFI | CCNGG | 1 cut(s) | 179 |
| BpmI | CTGGAG | 2 cut(s) | 126, 623 |
| Bpu10I | CCTNAGC | 1 cut(s) | 543 |
| Bpu14I | TTCGAA | 1 cut(s) | 359 |
| BpuEI | CTTGAG | 1 cut(s) | 280 |
| BpuMI | CCSGG | 1 cut(s) | 179 |
| BsaAI | YACGTR | 1 cut(s) | 100 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 178 |
| Bse21I | CCTNAGG | 1 cut(s) | 283 |
| Bse3DI | GCAATG | 1 cut(s) | 13 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BseMI | GCAATG | 1 cut(s) | 13 |
| BseMII | CTCAG | 2 cut(s) | 100, 477 |
| BseRI | GAGGAG | 4 cut(s) | 74, 259, 280, 283 |
| BshFI | GGCC | 3 cut(s) | 168, 266, 442 |
| BsiHKAI | GWGCWC | 1 cut(s) | 204 |
| BsiSI | CCGG | 1 cut(s) | 179 |
| BslFI | GGGAC | 2 cut(s) | 161, 319 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 178 |
| BsmAI | GTCTC | 1 cut(s) | 21 |
| BsmFI | GGGAC | 2 cut(s) | 161, 319 |
| BsnI | GGCC | 3 cut(s) | 168, 266, 442 |
| Bsp119I | TTCGAA | 1 cut(s) | 359 |
| Bsp1286I | GDGCHC | 1 cut(s) | 204 |
| Bsp143I | GATC | 2 cut(s) | 111, 375 |
| BspACI | CCGC | 3 cut(s) | 149, 279, 443 |
| BspANI | GGCC | 3 cut(s) | 168, 266, 442 |
| BspCNI | CTCAG | 2 cut(s) | 99, 478 |
| BspLI | GGNNCC | 4 cut(s) | 73, 257, 289, 315 |
| BspT104I | TTCGAA | 1 cut(s) | 359 |
| BsrDI | GCAATG | 1 cut(s) | 13 |
| BssMI | GATC | 2 cut(s) | 111, 375 |
| BstBAI | YACGTR | 1 cut(s) | 100 |
| BstBI | TTCGAA | 1 cut(s) | 359 |
| BstC8I | GCNNGC | 3 cut(s) | 250, 276, 482 |
| BstDEI | CTNAG | 5 cut(s) | 43, 86, 283, 486, 543 |
| BstKTI | GATC | 2 cut(s) | 114, 378 |
| BstMAI | GTCTC | 1 cut(s) | 21 |
| BstMBI | GATC | 2 cut(s) | 111, 375 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 249, 490 |
| BstNSI | RCATGY | 1 cut(s) | 252 |
| BstSCI | CCNGG | 1 cut(s) | 177 |
| Bsu36I | CCTNAGG | 1 cut(s) | 283 |
| BsuRI | GGCC | 3 cut(s) | 168, 266, 442 |
| BtsI | GCAGTG | 1 cut(s) | 18 |
| BtsIMutI | CAGTG | 1 cut(s) | 18 |
| Cac8I | GCNNGC | 3 cut(s) | 250, 276, 482 |
| Cfr13I | GGNCC | 2 cut(s) | 256, 440 |
| Csp6I | GTAC | 1 cut(s) | 346 |
| CviAII | CATG | 6 cut(s) | 115, 146, 209, 249, 585, 631 |
| CviQI | GTAC | 1 cut(s) | 346 |
| DdeI | CTNAG | 5 cut(s) | 43, 86, 283, 486, 543 |
| DpnI | GATC | 2 cut(s) | 113, 377 |
| DpnII | GATC | 2 cut(s) | 111, 375 |
| EaeI | YGGCCR | 1 cut(s) | 166 |
| Ecl136II | GAGCTC | 1 cut(s) | 202 |
| Eco24I | GRGCYC | 1 cut(s) | 204 |
| Eco47I | GGWCC | 1 cut(s) | 256 |
| Eco53kI | GAGCTC | 1 cut(s) | 202 |
| Eco81I | CCTNAGG | 1 cut(s) | 283 |
| EcoICRI | GAGCTC | 1 cut(s) | 202 |
| EcoO109I | RGGNCCY | 1 cut(s) | 256 |
| EcoT38I | GRGCYC | 1 cut(s) | 204 |
| FaeI | CATG | 6 cut(s) | 118, 149, 212, 252, 588, 634 |
| FaqI | GGGAC | 2 cut(s) | 161, 319 |
| FatI | CATG | 6 cut(s) | 114, 145, 208, 248, 584, 630 |
| FbaI | TGATCA | 1 cut(s) | 375 |
| Fnu4HI | GCNGC | 2 cut(s) | 279, 443 |
| FriOI | GRGCYC | 1 cut(s) | 204 |
| Fsp4HI | GCNGC | 2 cut(s) | 279, 443 |
| FspBI | CTAG | 2 cut(s) | 453, 459 |
| GluI | GCNGC | 2 cut(s) | 279, 443 |
| GsuI | CTGGAG | 2 cut(s) | 126, 623 |
| HaeIII | GGCC | 3 cut(s) | 168, 266, 442 |
| HapII | CCGG | 1 cut(s) | 179 |
| Hin1II | CATG | 6 cut(s) | 118, 149, 212, 252, 588, 634 |
| HindIII | AAGCTT | 1 cut(s) | 545 |
| HinfI | GANTC | 3 cut(s) | 81, 152, 332 |
| HpaII | CCGG | 1 cut(s) | 179 |
| HphI | GGTGA | 1 cut(s) | 573 |
| Hpy188I | TCNGA | 5 cut(s) | 67, 89, 318, 329, 562 |
| Hpy188III | TCNNGA | 2 cut(s) | 128, 373 |
| HpyAV | CCTTC | 3 cut(s) | 62, 304, 361 |
| HpyCH4IV | ACGT | 1 cut(s) | 99 |
| HpyCH4V | TGCA | 4 cut(s) | 11, 252, 493, 588 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 249, 490 |
| HpyF3I | CTNAG | 5 cut(s) | 43, 86, 283, 486, 543 |
| HpySE526I | ACGT | 1 cut(s) | 99 |
| Hsp92II | CATG | 6 cut(s) | 118, 149, 212, 252, 588, 634 |
| Ksp22I | TGATCA | 1 cut(s) | 375 |
| Kzo9I | GATC | 2 cut(s) | 111, 375 |
| LmnI | GCTCC | 2 cut(s) | 293, 319 |
| LpnPI | CCDG | 8 cut(s) | 90, 141, 192, 238, 402, 459, 498, 587 |
| MaeI | CTAG | 2 cut(s) | 453, 459 |
| MaeII | ACGT | 1 cut(s) | 99 |
| MaeIII | GTNAC | 1 cut(s) | 448 |
| MalI | GATC | 2 cut(s) | 113, 377 |
| MboI | GATC | 2 cut(s) | 111, 375 |
| MboII | GAAGA | 1 cut(s) | 151 |
| MfeI | CAATTG | 1 cut(s) | 530 |
| MhlI | GDGCHC | 1 cut(s) | 204 |
| MluCI | AATT | 5 cut(s) | 322, 408, 432, 530, 590 |
| MlyI | GAGTC | 3 cut(s) | 75, 146, 341 |
| MnlI | CCTC | 7 cut(s) | 83, 95, 269, 277, 280, 301, 304 |
| MseI | TTAA | 1 cut(s) | 321 |
| MspI | CCGG | 1 cut(s) | 179 |
| MspR9I | CCNGG | 1 cut(s) | 179 |
| MunI | CAATTG | 1 cut(s) | 530 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 249, 490 |
| NciI | CCSGG | 1 cut(s) | 179 |
| NdeII | GATC | 2 cut(s) | 111, 375 |
| NlaIII | CATG | 6 cut(s) | 118, 149, 212, 252, 588, 634 |
| NlaIV | GGNNCC | 4 cut(s) | 73, 257, 289, 315 |
| NmeAIII | GCCGAG | 1 cut(s) | 242 |
| NspI | RCATGY | 1 cut(s) | 252 |
| NspV | TTCGAA | 1 cut(s) | 359 |
| PaeI | GCATGC | 1 cut(s) | 252 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 171 |
| PkrI | GCNGC | 2 cut(s) | 280, 444 |
| PleI | GAGTC | 3 cut(s) | 75, 146, 340 |
| PpsI | GAGTC | 3 cut(s) | 75, 146, 340 |
| Ppu21I | YACGTR | 1 cut(s) | 100 |
| PpuMI | RGGWCCY | 1 cut(s) | 256 |
| PshBI | ATTAAT | 1 cut(s) | 321 |
| Psp124BI | GAGCTC | 1 cut(s) | 204 |
| Psp5II | RGGWCCY | 1 cut(s) | 256 |
| PspN4I | GGNNCC | 4 cut(s) | 73, 257, 289, 315 |
| PspPI | GGNCC | 2 cut(s) | 256, 440 |
| PspPPI | RGGWCCY | 1 cut(s) | 256 |
| RsaI | GTAC | 1 cut(s) | 347 |
| RsaNI | GTAC | 1 cut(s) | 346 |
| SacI | GAGCTC | 1 cut(s) | 204 |
| SaqAI | TTAA | 1 cut(s) | 321 |
| SatI | GCNGC | 2 cut(s) | 279, 443 |
| Sau3AI | GATC | 2 cut(s) | 111, 375 |
| Sau96I | GGNCC | 2 cut(s) | 256, 440 |
| SchI | GAGTC | 3 cut(s) | 75, 146, 341 |
| ScrFI | CCNGG | 1 cut(s) | 179 |
| SduI | GDGCHC | 1 cut(s) | 204 |
| SfuI | TTCGAA | 1 cut(s) | 359 |
| SinI | GGWCC | 1 cut(s) | 256 |
| SmlI | CTYRAG | 1 cut(s) | 295 |
| SmoI | CTYRAG | 1 cut(s) | 295 |
| SphI | GCATGC | 1 cut(s) | 252 |
| Sse9I | AATT | 5 cut(s) | 322, 408, 432, 530, 590 |
| SsiI | CCGC | 3 cut(s) | 149, 279, 443 |
| SspMI | CTAG | 2 cut(s) | 453, 459 |
| SstI | GAGCTC | 1 cut(s) | 204 |
| StyD4I | CCNGG | 1 cut(s) | 177 |
| TaiI | ACGT | 1 cut(s) | 102 |
| TaqI | TCGA | 3 cut(s) | 120, 342, 359 |
| TasI | AATT | 5 cut(s) | 322, 408, 432, 530, 590 |
| TatI | WGTACW | 1 cut(s) | 345 |
| TauI | GCSGC | 2 cut(s) | 281, 445 |
| Tru1I | TTAA | 1 cut(s) | 321 |
| Tru9I | TTAA | 1 cut(s) | 321 |
| TscAI | CASTG | 1 cut(s) | 18 |
| TspDTI | ATGAA | 5 cut(s) | 151, 197, 385, 519, 583 |
| TspGWI | ACGGA | 1 cut(s) | 9 |
| TspRI | CASTG | 1 cut(s) | 18 |
| VpaK11BI | GGWCC | 1 cut(s) | 256 |
| VspI | ATTAAT | 1 cut(s) | 321 |
| XapI | RAATTY | 1 cut(s) | 590 |
| XceI | RCATGY | 1 cut(s) | 252 |
| XspI | CTAG | 2 cut(s) | 453, 459 |