Replication factor C subunit
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G27740 |
| fragaria_vesca | FvH4_1g23560 FvH4_2g04970 FvH4_2g04970 FvH4_2g04970 |
| malus_domestica | MD04G1041000.v1.1 MD04G1041300.v1.1 MD12G1011300.v1.1 |
| prunus_persica | Prupe.1G194700_v2.0.a1 Prupe.1G194700_v2.0.a1 Prupe.4G268900_v2.0.a1 Prupe.4G268900_v2.0.a1 Prupe.7G013300_v2.0.a1 Prupe.7G013300_v2.0.a1 Prupe.7G013300_v2.0.a1 |
| pyrus_communis | pycom12g00880 |
| rosa_chinensis | RchiOBHm_Chr3g0496081 |
| rosa_laevigata | RLG00000022564 |
| rosa_multiflora | Rmu_sc0002392.1_g000001 |
| rosa_roxburghii | Rroxscaffold_6G00389580 |
| rosa_rugosa | Rorug03G0279300 Rorug03G0279400 Rorug03G0279400 Rorug03G0279400 Rorug03G0279500 |
| rosa_samantha | Rh3AG326500 Rh3BG362800 Rh3DG362200 |
| rosa_wichuraiana | Rw3G028590 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 628 |
| AcuI | CTGAAG | 1 cut(s) | 342 |
| AfaI | GTAC | 2 cut(s) | 291, 808 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 282 |
| AflII | CTTAAG | 1 cut(s) | 472 |
| AgsI | TTSAA | 7 cut(s) | 131, 228, 512, 682, 706, 727, 803 |
| AjnI | CCWGG | 1 cut(s) | 534 |
| AluBI | AGCT | 9 cut(s) | 29, 55, 306, 424, 452, 471, 482, 646, 788 |
| AluI | AGCT | 9 cut(s) | 29, 55, 306, 424, 452, 471, 482, 646, 788 |
| Alw26I | GTCTC | 1 cut(s) | 339 |
| ApeKI | GCWGC | 4 cut(s) | 418, 421, 440, 749 |
| AsuHPI | GGTGA | 1 cut(s) | 788 |
| AsuII | TTCGAA | 1 cut(s) | 250 |
| BanII | GRGCYC | 2 cut(s) | 95, 608 |
| BauI | CACGAG | 1 cut(s) | 731 |
| BbvI | GCAGC | 4 cut(s) | 405, 427, 433, 736 |
| BceAI | ACGGC | 1 cut(s) | 489 |
| BciT130I | CCWGG | 1 cut(s) | 536 |
| BciVI | GTATCC | 1 cut(s) | 528 |
| BcoDI | GTCTC | 1 cut(s) | 339 |
| BfaI | CTAG | 3 cut(s) | 96, 287, 821 |
| BfmI | CTRYAG | 1 cut(s) | 419 |
| BfrI | CTTAAG | 1 cut(s) | 472 |
| BfuI | GTATCC | 1 cut(s) | 528 |
| BisI | GCNGC | 5 cut(s) | 419, 422, 441, 629, 750 |
| BlsI | GCNGC | 5 cut(s) | 420, 423, 442, 630, 751 |
| BmcAI | AGTACT | 1 cut(s) | 291 |
| Bme1390I | CCNGG | 1 cut(s) | 536 |
| BmrFI | CCNGG | 1 cut(s) | 536 |
| BmsI | GCATC | 4 cut(s) | 91, 590, 706, 759 |
| BpmI | CTGGAG | 1 cut(s) | 651 |
| Bpu14I | TTCGAA | 1 cut(s) | 250 |
| BsaI | GGTCTC | 1 cut(s) | 339 |
| BsaWI | WCCGGW | 1 cut(s) | 330 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 282 |
| BseBI | CCWGG | 1 cut(s) | 536 |
| BseGI | GGATG | 2 cut(s) | 721, 774 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BseMII | CTCAG | 1 cut(s) | 80 |
| BseXI | GCAGC | 4 cut(s) | 405, 427, 433, 736 |
| BsiSI | CCGG | 1 cut(s) | 331 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 282 |
| BsmAI | GTCTC | 1 cut(s) | 339 |
| Bso31I | GGTCTC | 1 cut(s) | 339 |
| Bsp119I | TTCGAA | 1 cut(s) | 250 |
| Bsp1286I | GDGCHC | 2 cut(s) | 95, 608 |
| Bsp143I | GATC | 1 cut(s) | 672 |
| BspACI | CCGC | 1 cut(s) | 628 |
| BspCNI | CTCAG | 1 cut(s) | 81 |
| BspMAI | CTGCAG | 1 cut(s) | 423 |
| BspT104I | TTCGAA | 1 cut(s) | 250 |
| BspTI | CTTAAG | 1 cut(s) | 472 |
| BspTNI | GGTCTC | 1 cut(s) | 339 |
| BssMI | GATC | 1 cut(s) | 672 |
| BssSI | CACGAG | 1 cut(s) | 731 |
| Bst2BI | CACGAG | 1 cut(s) | 731 |
| Bst2UI | CCWGG | 1 cut(s) | 536 |
| Bst4CI | ACNGT | 1 cut(s) | 516 |
| Bst6I | CTCTTC | 2 cut(s) | 252, 677 |
| BstAFI | CTTAAG | 1 cut(s) | 472 |
| BstBI | TTCGAA | 1 cut(s) | 250 |
| BstC8I | GCNNGC | 1 cut(s) | 284 |
| BstDEI | CTNAG | 2 cut(s) | 89, 199 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 280 |
| BstF5I | GGATG | 2 cut(s) | 721, 774 |
| BstKTI | GATC | 1 cut(s) | 675 |
| BstMAI | GTCTC | 1 cut(s) | 339 |
| BstMBI | GATC | 1 cut(s) | 672 |
| BstMWI | GCNNNNNNNGC | 4 cut(s) | 26, 303, 449, 778 |
| BstNI | CCWGG | 1 cut(s) | 536 |
| BstSCI | CCNGG | 1 cut(s) | 534 |
| BstSFI | CTRYAG | 1 cut(s) | 419 |
| BstV1I | GCAGC | 4 cut(s) | 405, 427, 433, 736 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 555 |
| BsuI | GTATCC | 1 cut(s) | 528 |
| BtsCI | GGATG | 2 cut(s) | 721, 774 |
| Cac8I | GCNNGC | 1 cut(s) | 284 |
| CseI | GACGC | 1 cut(s) | 761 |
| Csp6I | GTAC | 2 cut(s) | 290, 807 |
| CviAII | CATG | 1 cut(s) | 21 |
| CviQI | GTAC | 2 cut(s) | 290, 807 |
| DdeI | CTNAG | 2 cut(s) | 89, 199 |
| DpnI | GATC | 1 cut(s) | 674 |
| DpnII | GATC | 1 cut(s) | 672 |
| Eam1104I | CTCTTC | 2 cut(s) | 252, 677 |
| EarI | CTCTTC | 2 cut(s) | 252, 677 |
| Eco24I | GRGCYC | 2 cut(s) | 95, 608 |
| Eco31I | GGTCTC | 1 cut(s) | 339 |
| Eco57I | CTGAAG | 1 cut(s) | 342 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 280 |
| EcoRII | CCWGG | 1 cut(s) | 534 |
| EcoT38I | GRGCYC | 2 cut(s) | 95, 608 |
| FaeI | CATG | 1 cut(s) | 24 |
| FatI | CATG | 1 cut(s) | 20 |
| Fnu4HI | GCNGC | 5 cut(s) | 419, 422, 441, 629, 750 |
| FokI | GGATG | 2 cut(s) | 728, 781 |
| FriOI | GRGCYC | 2 cut(s) | 95, 608 |
| Fsp4HI | GCNGC | 5 cut(s) | 419, 422, 441, 629, 750 |
| FspBI | CTAG | 3 cut(s) | 96, 287, 821 |
| GluI | GCNGC | 5 cut(s) | 419, 422, 441, 629, 750 |
| GsuI | CTGGAG | 1 cut(s) | 651 |
| HapII | CCGG | 1 cut(s) | 331 |
| HgaI | GACGC | 1 cut(s) | 761 |
| Hin1II | CATG | 1 cut(s) | 24 |
| HincII | GTYRAC | 1 cut(s) | 217 |
| HindII | GTYRAC | 1 cut(s) | 217 |
| HpaII | CCGG | 1 cut(s) | 331 |
| HphI | GGTGA | 1 cut(s) | 788 |
| Hpy166II | GTNNAC | 1 cut(s) | 217 |
| Hpy188I | TCNGA | 2 cut(s) | 574, 586 |
| Hpy188III | TCNNGA | 6 cut(s) | 113, 131, 228, 668, 679, 821 |
| Hpy8I | GTNNAC | 1 cut(s) | 217 |
| HpyAV | CCTTC | 3 cut(s) | 407, 589, 797 |
| HpyCH4III | ACNGT | 1 cut(s) | 516 |
| HpyCH4V | TGCA | 7 cut(s) | 104, 282, 362, 421, 581, 719, 752 |
| HpyF10VI | GCNNNNNNNGC | 4 cut(s) | 26, 303, 449, 778 |
| HpyF3I | CTNAG | 2 cut(s) | 89, 199 |
| Hsp92II | CATG | 1 cut(s) | 24 |
| Kzo9I | GATC | 1 cut(s) | 672 |
| LmnI | GCTCC | 3 cut(s) | 468, 479, 598 |
| LpnPI | CCDG | 9 cut(s) | 15, 90, 98, 268, 344, 521, 548, 608, 681 |
| Lsp1109I | GCAGC | 4 cut(s) | 405, 427, 433, 736 |
| LweI | GCATC | 4 cut(s) | 91, 590, 706, 759 |
| MaeI | CTAG | 3 cut(s) | 96, 287, 821 |
| MaeIII | GTNAC | 2 cut(s) | 316, 530 |
| MalI | GATC | 1 cut(s) | 674 |
| MboI | GATC | 1 cut(s) | 672 |
| MboII | GAAGA | 5 cut(s) | 239, 264, 383, 694, 718 |
| MhlI | GDGCHC | 2 cut(s) | 95, 608 |
| MluCI | AATT | 3 cut(s) | 138, 576, 655 |
| MmeI | TCCRAC | 1 cut(s) | 693 |
| MnlI | CCTC | 4 cut(s) | 553, 675, 678, 727 |
| MseI | TTAA | 5 cut(s) | 84, 141, 345, 473, 654 |
| MspCI | CTTAAG | 1 cut(s) | 472 |
| MspI | CCGG | 1 cut(s) | 331 |
| MspR9I | CCNGG | 1 cut(s) | 536 |
| MvaI | CCWGG | 1 cut(s) | 536 |
| MwoI | GCNNNNNNNGC | 4 cut(s) | 26, 303, 449, 778 |
| NdeII | GATC | 1 cut(s) | 672 |
| NlaIII | CATG | 1 cut(s) | 24 |
| NspV | TTCGAA | 1 cut(s) | 250 |
| PkrI | GCNGC | 5 cut(s) | 420, 423, 442, 630, 751 |
| Psp6I | CCWGG | 1 cut(s) | 534 |
| PspGI | CCWGG | 1 cut(s) | 534 |
| PstI | CTGCAG | 1 cut(s) | 423 |
| RsaI | GTAC | 2 cut(s) | 291, 808 |
| RsaNI | GTAC | 2 cut(s) | 290, 807 |
| SaqAI | TTAA | 5 cut(s) | 84, 141, 345, 473, 654 |
| SatI | GCNGC | 5 cut(s) | 419, 422, 441, 629, 750 |
| Sau3AI | GATC | 1 cut(s) | 672 |
| ScaI | AGTACT | 1 cut(s) | 291 |
| ScrFI | CCNGG | 1 cut(s) | 536 |
| SduI | GDGCHC | 2 cut(s) | 95, 608 |
| SfaNI | GCATC | 4 cut(s) | 91, 590, 706, 759 |
| SfcI | CTRYAG | 1 cut(s) | 419 |
| SfuI | TTCGAA | 1 cut(s) | 250 |
| SmlI | CTYRAG | 1 cut(s) | 472 |
| SmoI | CTYRAG | 1 cut(s) | 472 |
| Sse9I | AATT | 3 cut(s) | 138, 576, 655 |
| SsiI | CCGC | 1 cut(s) | 628 |
| SspMI | CTAG | 3 cut(s) | 96, 287, 821 |
| StyD4I | CCNGG | 1 cut(s) | 534 |
| TaaI | ACNGT | 1 cut(s) | 516 |
| TaqI | TCGA | 1 cut(s) | 250 |
| TasI | AATT | 3 cut(s) | 138, 576, 655 |
| TatI | WGTACW | 1 cut(s) | 289 |
| TauI | GCSGC | 1 cut(s) | 631 |
| Tru1I | TTAA | 5 cut(s) | 84, 141, 345, 473, 654 |
| Tru9I | TTAA | 5 cut(s) | 84, 141, 345, 473, 654 |
| TseI | GCWGC | 4 cut(s) | 418, 421, 440, 749 |
| TspDTI | ATGAA | 5 cut(s) | 225, 388, 398, 608, 774 |
| Vha464I | CTTAAG | 1 cut(s) | 472 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 280 |
| XbaI | TCTAGA | 1 cut(s) | 820 |
| XspI | CTAG | 3 cut(s) | 96, 287, 821 |
| ZrmI | AGTACT | 1 cut(s) | 291 |