ATP synthase regulation protein NCA2
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G12290 AT5G12290 AT5G12290 AT5G12290 |
| fragaria_vesca | FvH4_5g07960 |
| malus_domestica | MD03G1163400.v1.1 |
| prunus_persica | Prupe.4G269200_v2.0.a1 |
| pyrus_communis | pycom5153684g00200 |
| rosa_chinensis | RchiOBHm_Chr7g0190441 |
| rosa_laevigata | RLG00000004532 |
| rosa_multiflora | Rmu_sc0002614.1_g000003 Rmu_sc0029194.1_g000001 |
| rosa_roxburghii | Rroxscaffold_3G00264620 |
| rosa_rugosa | Rorug06G0504700 |
| rosa_samantha | Rh7AG110600 Rh7BG113200 Rh7CG115400 Rh7DG113700 |
| rosa_wichuraiana | Rw0G019860 Rw7G009600 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 1077 |
| Acc16I | TGCGCA | 1 cut(s) | 1707 |
| Acc36I | ACCTGC | 1 cut(s) | 148 |
| Acc65I | GGTACC | 1 cut(s) | 136 |
| AccB1I | GGYRCC | 1 cut(s) | 136 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 940 |
| AciI | CCGC | 5 cut(s) | 82, 323, 805, 845, 1166 |
| AclWI | GGATC | 9 cut(s) | 478, 710, 879, 892, 1009, 1022, 1236, 1335, 1749 |
| AcoI | YGGCCR | 3 cut(s) | 666, 787, 1353 |
| AcsI | RAATTY | 3 cut(s) | 267, 491, 724 |
| AcuI | CTGAAG | 2 cut(s) | 585, 1607 |
| AfaI | GTAC | 5 cut(s) | 138, 959, 1361, 1675, 1718 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 226, 940, 1788 |
| AflII | CTTAAG | 1 cut(s) | 640 |
| AgeI | ACCGGT | 1 cut(s) | 1781 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1299 |
| AjnI | CCWGG | 1 cut(s) | 1355 |
| Alw21I | GWGCWC | 1 cut(s) | 408 |
| Alw26I | GTCTC | 4 cut(s) | 71, 215, 1190, 1759 |
| AlwI | GGATC | 9 cut(s) | 478, 710, 879, 892, 1009, 1022, 1236, 1335, 1749 |
| Ama87I | CYCGRG | 1 cut(s) | 260 |
| AoxI | GGCC | 6 cut(s) | 175, 512, 666, 787, 1039, 1353 |
| ApeKI | GCWGC | 4 cut(s) | 143, 325, 831, 1520 |
| ApoI | RAATTY | 3 cut(s) | 267, 491, 724 |
| AseI | ATTAAT | 3 cut(s) | 743, 753, 921 |
| AsiGI | ACCGGT | 1 cut(s) | 1781 |
| Asp718I | GGTACC | 1 cut(s) | 136 |
| AspLEI | GCGC | 1 cut(s) | 1708 |
| AspS9I | GGNCC | 2 cut(s) | 175, 512 |
| AsuHPI | GGTGA | 1 cut(s) | 1796 |
| AvaI | CYCGRG | 1 cut(s) | 260 |
| BalI | TGGCCA | 2 cut(s) | 789, 1355 |
| BamHI | GGATCC | 2 cut(s) | 884, 1014 |
| BanI | GGYRCC | 1 cut(s) | 136 |
| BauI | CACGAG | 1 cut(s) | 1413 |
| BbsI | GAAGAC | 1 cut(s) | 305 |
| Bbv12I | GWGCWC | 1 cut(s) | 408 |
| BbvCI | CCTCAGC | 1 cut(s) | 465 |
| BbvI | GCAGC | 4 cut(s) | 155, 312, 843, 1507 |
| BccI | CCATC | 5 cut(s) | 798, 1078, 1142, 1219, 1687 |
| BceAI | ACGGC | 1 cut(s) | 1476 |
| BciT130I | CCWGG | 1 cut(s) | 1357 |
| BciVI | GTATCC | 1 cut(s) | 1579 |
| BclI | TGATCA | 1 cut(s) | 1684 |
| BcoDI | GTCTC | 4 cut(s) | 71, 215, 1190, 1759 |
| BfaI | CTAG | 5 cut(s) | 372, 459, 773, 1517, 1590 |
| BfmI | CTRYAG | 1 cut(s) | 141 |
| BfrI | CTTAAG | 1 cut(s) | 640 |
| BfuAI | ACCTGC | 1 cut(s) | 148 |
| BfuI | GTATCC | 1 cut(s) | 1579 |
| BisI | GCNGC | 5 cut(s) | 144, 326, 806, 832, 1521 |
| BlsI | GCNGC | 5 cut(s) | 145, 327, 807, 833, 1522 |
| Bme1390I | CCNGG | 1 cut(s) | 1357 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1299 |
| BmeT110I | CYCGRG | 1 cut(s) | 260 |
| BmgT120I | GGNCC | 2 cut(s) | 175, 512 |
| BmiI | GGNNCC | 4 cut(s) | 138, 218, 886, 1016 |
| BmrFI | CCNGG | 1 cut(s) | 1357 |
| BmrI | ACTGGG | 1 cut(s) | 883 |
| BmsI | GCATC | 7 cut(s) | 377, 545, 608, 788, 904, 1455, 1693 |
| BmuI | ACTGGG | 1 cut(s) | 883 |
| BpiI | GAAGAC | 1 cut(s) | 305 |
| BpmI | CTGGAG | 3 cut(s) | 132, 187, 962 |
| Bpu10I | CCTNAGC | 1 cut(s) | 465 |
| BsaJI | CCNNGG | 2 cut(s) | 669, 992 |
| BsaWI | WCCGGW | 3 cut(s) | 352, 1324, 1781 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 398, 428 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 226, 940, 1788 |
| Bse118I | RCCGGY | 2 cut(s) | 1528, 1781 |
| Bse1I | ACTGG | 2 cut(s) | 889, 1912 |
| Bse3DI | GCAATG | 3 cut(s) | 135, 728, 807 |
| BseBI | CCWGG | 1 cut(s) | 1357 |
| BseDI | CCNNGG | 2 cut(s) | 669, 992 |
| BseGI | GGATG | 4 cut(s) | 560, 919, 1378, 1698 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 226, 940, 1788 |
| BseMI | GCAATG | 3 cut(s) | 135, 728, 807 |
| BseMII | CTCAG | 5 cut(s) | 456, 701, 852, 1059, 1867 |
| BseNI | ACTGG | 2 cut(s) | 889, 1912 |
| BseRI | GAGGAG | 2 cut(s) | 716, 1642 |
| BseXI | GCAGC | 4 cut(s) | 155, 312, 843, 1507 |
| BseYI | CCCAGC | 1 cut(s) | 1829 |
| BsgI | GTGCAG | 1 cut(s) | 1848 |
| BshFI | GGCC | 6 cut(s) | 177, 514, 668, 789, 1041, 1355 |
| BshNI | GGYRCC | 1 cut(s) | 136 |
| BshTI | ACCGGT | 1 cut(s) | 1781 |
| BsiHKAI | GWGCWC | 1 cut(s) | 408 |
| BsiHKCI | CYCGRG | 1 cut(s) | 260 |
| BsiSI | CCGG | 5 cut(s) | 353, 866, 1325, 1529, 1782 |
| BslFI | GGGAC | 2 cut(s) | 221, 827 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 226, 940, 1788 |
| BsmAI | GTCTC | 4 cut(s) | 71, 215, 1190, 1759 |
| BsmFI | GGGAC | 2 cut(s) | 221, 827 |
| BsmI | GAATGC | 3 cut(s) | 34, 1324, 1532 |
| BsnI | GGCC | 6 cut(s) | 177, 514, 668, 789, 1041, 1355 |
| BsoBI | CYCGRG | 1 cut(s) | 260 |
| Bsp1286I | GDGCHC | 1 cut(s) | 408 |
| BspACI | CCGC | 5 cut(s) | 82, 323, 805, 845, 1166 |
| BspANI | GGCC | 6 cut(s) | 177, 514, 668, 789, 1041, 1355 |
| BspCNI | CTCAG | 5 cut(s) | 457, 702, 851, 1058, 1866 |
| BspLI | GGNNCC | 4 cut(s) | 138, 218, 886, 1016 |
| BspMAI | CTGCAG | 1 cut(s) | 145 |
| BspMI | ACCTGC | 1 cut(s) | 148 |
| BspPI | GGATC | 9 cut(s) | 478, 710, 879, 892, 1009, 1022, 1236, 1335, 1749 |
| BspT107I | GGYRCC | 1 cut(s) | 136 |
| BspTI | CTTAAG | 1 cut(s) | 640 |
| BsrDI | GCAATG | 3 cut(s) | 135, 728, 807 |
| BsrFI | RCCGGY | 2 cut(s) | 1528, 1781 |
| BsrI | ACTGG | 2 cut(s) | 889, 1912 |
| BssAI | RCCGGY | 2 cut(s) | 1528, 1781 |
| BssECI | CCNNGG | 2 cut(s) | 669, 992 |
| BssSI | CACGAG | 1 cut(s) | 1413 |
| BssT1I | CCWWGG | 1 cut(s) | 992 |
| Bst2BI | CACGAG | 1 cut(s) | 1413 |
| Bst2UI | CCWGG | 1 cut(s) | 1357 |
| Bst4CI | ACNGT | 3 cut(s) | 97, 902, 1889 |
| Bst6I | CTCTTC | 1 cut(s) | 247 |
| BstAFI | CTTAAG | 1 cut(s) | 640 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 802 |
| BstC8I | GCNNGC | 5 cut(s) | 86, 798, 1410, 1569, 1867 |
| BstDEI | CTNAG | 5 cut(s) | 465, 710, 838, 1045, 1853 |
| BstF5I | GGATG | 4 cut(s) | 560, 919, 1378, 1698 |
| BstHHI | GCGC | 1 cut(s) | 1708 |
| BstMAI | GTCTC | 4 cut(s) | 71, 215, 1190, 1759 |
| BstMWI | GCNNNNNNNGC | 8 cut(s) | 125, 149, 451, 802, 1038, 1146, 1517, 1529 |
| BstNI | CCWGG | 1 cut(s) | 1357 |
| BstNSI | RCATGY | 4 cut(s) | 312, 445, 800, 1772 |
| BstSCI | CCNGG | 1 cut(s) | 1355 |
| BstSFI | CTRYAG | 1 cut(s) | 141 |
| BstV1I | GCAGC | 4 cut(s) | 155, 312, 843, 1507 |
| BstV2I | GAAGAC | 1 cut(s) | 305 |
| BstX2I | RGATCY | 4 cut(s) | 715, 884, 1014, 1228 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 664 |
| BstYI | RGATCY | 4 cut(s) | 715, 884, 1014, 1228 |
| BsuI | GTATCC | 1 cut(s) | 1579 |
| BsuRI | GGCC | 6 cut(s) | 177, 514, 668, 789, 1041, 1355 |
| BtgZI | GCGATG | 1 cut(s) | 1478 |
| BtsCI | GGATG | 4 cut(s) | 560, 919, 1378, 1698 |
| BtsI | GCAGTG | 4 cut(s) | 338, 815, 1715, 1799 |
| BtsIMutI | CAGTG | 7 cut(s) | 102, 338, 815, 896, 1291, 1715, 1799 |
| BveI | ACCTGC | 1 cut(s) | 148 |
| Cac8I | GCNNGC | 5 cut(s) | 86, 798, 1410, 1569, 1867 |
| CfoI | GCGC | 1 cut(s) | 1708 |
| Cfr10I | RCCGGY | 2 cut(s) | 1528, 1781 |
| Cfr13I | GGNCC | 2 cut(s) | 175, 512 |
| Csp6I | GTAC | 5 cut(s) | 137, 958, 1360, 1674, 1717 |
| CspAI | ACCGGT | 1 cut(s) | 1781 |
| CviQI | GTAC | 5 cut(s) | 137, 958, 1360, 1674, 1717 |
| DdeI | CTNAG | 5 cut(s) | 465, 710, 838, 1045, 1853 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1077 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1299 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1077 |
| EaeI | YGGCCR | 3 cut(s) | 666, 787, 1353 |
| Eam1104I | CTCTTC | 1 cut(s) | 247 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1299 |
| EarI | CTCTTC | 1 cut(s) | 247 |
| Eco130I | CCWWGG | 1 cut(s) | 992 |
| Eco57I | CTGAAG | 2 cut(s) | 585, 1607 |
| Eco88I | CYCGRG | 1 cut(s) | 260 |
| EcoO109I | RGGNCCY | 1 cut(s) | 175 |
| EcoRI | GAATTC | 1 cut(s) | 724 |
| EcoRII | CCWGG | 1 cut(s) | 1355 |
| EcoT14I | CCWWGG | 1 cut(s) | 992 |
| EcoT22I | ATGCAT | 1 cut(s) | 50 |
| ErhI | CCWWGG | 1 cut(s) | 992 |
| FaqI | GGGAC | 2 cut(s) | 221, 827 |
| FauI | CCCGC | 1 cut(s) | 852 |
| FbaI | TGATCA | 1 cut(s) | 1684 |
| Fnu4HI | GCNGC | 5 cut(s) | 144, 326, 806, 832, 1521 |
| FokI | GGATG | 4 cut(s) | 567, 926, 1365, 1705 |
| Fsp4HI | GCNGC | 5 cut(s) | 144, 326, 806, 832, 1521 |
| FspBI | CTAG | 5 cut(s) | 372, 459, 773, 1517, 1590 |
| FspI | TGCGCA | 1 cut(s) | 1707 |
| GlaI | GCGC | 1 cut(s) | 1707 |
| GluI | GCNGC | 5 cut(s) | 144, 326, 806, 832, 1521 |
| GsaI | CCCAGC | 1 cut(s) | 1833 |
| GsuI | CTGGAG | 3 cut(s) | 132, 187, 962 |
| HaeIII | GGCC | 6 cut(s) | 177, 514, 668, 789, 1041, 1355 |
| HapII | CCGG | 5 cut(s) | 353, 866, 1325, 1529, 1782 |
| HhaI | GCGC | 1 cut(s) | 1708 |
| Hin6I | GCGC | 1 cut(s) | 1706 |
| HinP1I | GCGC | 1 cut(s) | 1706 |
| HindIII | AAGCTT | 2 cut(s) | 117, 519 |
| HinfI | GANTC | 7 cut(s) | 248, 815, 953, 1003, 1127, 1426, 1801 |
| HpaII | CCGG | 5 cut(s) | 353, 866, 1325, 1529, 1782 |
| HphI | GGTGA | 1 cut(s) | 1796 |
| Hpy166II | GTNNAC | 5 cut(s) | 55, 676, 894, 931, 1717 |
| Hpy188I | TCNGA | 8 cut(s) | 247, 616, 987, 1083, 1437, 1554, 1626, 1856 |
| Hpy8I | GTNNAC | 5 cut(s) | 55, 676, 894, 931, 1717 |
| HpyAV | CCTTC | 9 cut(s) | 99, 339, 524, 560, 875, 1403, 1592, 1596, 1908 |
| HpyCH4III | ACNGT | 3 cut(s) | 97, 902, 1889 |
| HpyF10VI | GCNNNNNNNGC | 8 cut(s) | 125, 149, 451, 802, 1038, 1146, 1517, 1529 |
| HpyF3I | CTNAG | 5 cut(s) | 465, 710, 838, 1045, 1853 |
| HspAI | GCGC | 1 cut(s) | 1706 |
| KpnI | GGTACC | 1 cut(s) | 140 |
| Ksp22I | TGATCA | 1 cut(s) | 1684 |
| LmnI | GCTCC | 2 cut(s) | 151, 403 |
| Lsp1109I | GCAGC | 4 cut(s) | 155, 312, 843, 1507 |
| LweI | GCATC | 7 cut(s) | 377, 545, 608, 788, 904, 1455, 1693 |
| MaeI | CTAG | 5 cut(s) | 372, 459, 773, 1517, 1590 |
| MaeIII | GTNAC | 5 cut(s) | 355, 705, 1000, 1524, 1858 |
| MflI | RGATCY | 4 cut(s) | 715, 884, 1014, 1228 |
| MhlI | GDGCHC | 1 cut(s) | 408 |
| MlsI | TGGCCA | 2 cut(s) | 789, 1355 |
| MluNI | TGGCCA | 2 cut(s) | 789, 1355 |
| MlyI | GAGTC | 2 cut(s) | 997, 1810 |
| Mox20I | TGGCCA | 2 cut(s) | 789, 1355 |
| Mph1103I | ATGCAT | 1 cut(s) | 50 |
| MscI | TGGCCA | 2 cut(s) | 789, 1355 |
| MseI | TTAA | 7 cut(s) | 489, 632, 641, 743, 753, 921, 1398 |
| MslI | CAYNNNNRTG | 1 cut(s) | 795 |
| Msp20I | TGGCCA | 2 cut(s) | 789, 1355 |
| MspA1I | CMGCKG | 3 cut(s) | 207, 325, 544 |
| MspCI | CTTAAG | 1 cut(s) | 640 |
| MspI | CCGG | 5 cut(s) | 353, 866, 1325, 1529, 1782 |
| MspR9I | CCNGG | 1 cut(s) | 1357 |
| Mva1269I | GAATGC | 3 cut(s) | 34, 1324, 1532 |
| MvaI | CCWGG | 1 cut(s) | 1357 |
| MwoI | GCNNNNNNNGC | 8 cut(s) | 125, 149, 451, 802, 1038, 1146, 1517, 1529 |
| NlaIV | GGNNCC | 4 cut(s) | 138, 218, 886, 1016 |
| NmeAIII | GCCGAG | 3 cut(s) | 329, 694, 1597 |
| NmuCI | GTSAC | 2 cut(s) | 1000, 1858 |
| NsbI | TGCGCA | 1 cut(s) | 1707 |
| NsiI | ATGCAT | 1 cut(s) | 50 |
| NspI | RCATGY | 4 cut(s) | 312, 445, 800, 1772 |
| PaeI | GCATGC | 1 cut(s) | 800 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 301, 1873 |
| PctI | GAATGC | 3 cut(s) | 34, 1324, 1532 |
| PfeI | GAWTC | 5 cut(s) | 248, 815, 953, 1127, 1426 |
| PflFI | GACNNNGTC | 1 cut(s) | 1074 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 940 |
| PinAI | ACCGGT | 1 cut(s) | 1781 |
| PkrI | GCNGC | 5 cut(s) | 145, 327, 807, 833, 1522 |
| PleI | GAGTC | 2 cut(s) | 997, 1809 |
| PpsI | GAGTC | 2 cut(s) | 997, 1809 |
| PshBI | ATTAAT | 3 cut(s) | 743, 753, 921 |
| Psp6I | CCWGG | 1 cut(s) | 1355 |
| PspFI | CCCAGC | 1 cut(s) | 1829 |
| PspGI | CCWGG | 1 cut(s) | 1355 |
| PspN4I | GGNNCC | 4 cut(s) | 138, 218, 886, 1016 |
| PspPI | GGNCC | 2 cut(s) | 175, 512 |
| PstI | CTGCAG | 1 cut(s) | 145 |
| PsuI | RGATCY | 4 cut(s) | 715, 884, 1014, 1228 |
| PsyI | GACNNNGTC | 1 cut(s) | 1074 |
| PvuII | CAGCTG | 2 cut(s) | 207, 544 |
| RsaI | GTAC | 5 cut(s) | 138, 959, 1361, 1675, 1718 |
| RsaNI | GTAC | 5 cut(s) | 137, 958, 1360, 1674, 1717 |
| RseI | CAYNNNNRTG | 1 cut(s) | 795 |
| SaqAI | TTAA | 7 cut(s) | 489, 632, 641, 743, 753, 921, 1398 |
| SatI | GCNGC | 5 cut(s) | 144, 326, 806, 832, 1521 |
| Sau96I | GGNCC | 2 cut(s) | 175, 512 |
| SchI | GAGTC | 2 cut(s) | 997, 1810 |
| ScrFI | CCNGG | 1 cut(s) | 1357 |
| SduI | GDGCHC | 1 cut(s) | 408 |
| SfaNI | GCATC | 7 cut(s) | 377, 545, 608, 788, 904, 1455, 1693 |
| SfcI | CTRYAG | 1 cut(s) | 141 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 795 |
| SmlI | CTYRAG | 1 cut(s) | 640 |
| SmoI | CTYRAG | 1 cut(s) | 640 |
| SphI | GCATGC | 1 cut(s) | 800 |
| SsiI | CCGC | 5 cut(s) | 82, 323, 805, 845, 1166 |
| SspI | AATATT | 1 cut(s) | 1010 |
| SspMI | CTAG | 5 cut(s) | 372, 459, 773, 1517, 1590 |
| StyD4I | CCNGG | 1 cut(s) | 1355 |
| StyI | CCWWGG | 1 cut(s) | 992 |
| TaaI | ACNGT | 3 cut(s) | 97, 902, 1889 |
| TaqI | TCGA | 2 cut(s) | 825, 1341 |
| TauI | GCSGC | 1 cut(s) | 808 |
| TfiI | GAWTC | 5 cut(s) | 248, 815, 953, 1127, 1426 |
| Tru1I | TTAA | 7 cut(s) | 489, 632, 641, 743, 753, 921, 1398 |
| Tru9I | TTAA | 7 cut(s) | 489, 632, 641, 743, 753, 921, 1398 |
| TscAI | CASTG | 7 cut(s) | 102, 345, 815, 896, 1291, 1715, 1799 |
| TseFI | GTSAC | 2 cut(s) | 1000, 1858 |
| TseI | GCWGC | 4 cut(s) | 143, 325, 831, 1520 |
| Tsp45I | GTSAC | 2 cut(s) | 1000, 1858 |
| TspDTI | ATGAA | 4 cut(s) | 33, 717, 1200, 1890 |
| TspGWI | ACGGA | 3 cut(s) | 310, 1007, 1734 |
| TspRI | CASTG | 7 cut(s) | 102, 345, 815, 896, 1291, 1715, 1799 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1074 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 940 |
| Vha464I | CTTAAG | 1 cut(s) | 640 |
| VspI | ATTAAT | 3 cut(s) | 743, 753, 921 |
| XapI | RAATTY | 3 cut(s) | 267, 491, 724 |
| XbaI | TCTAGA | 2 cut(s) | 371, 458 |
| XceI | RCATGY | 4 cut(s) | 312, 445, 800, 1772 |
| XspI | CTAG | 5 cut(s) | 372, 459, 773, 1517, 1590 |
| Zsp2I | ATGCAT | 1 cut(s) | 50 |