Prupe.4G281700_v2.0.a1
MYB Family

Target of Myb protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp04
OG0009866
Physical Location & Seq
Reverse (-)
23969985 .. 23979227
9243 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.4G281700.2

Sequence Viewer

Length: 1203 bp
ATGGCTGCCGAGCTTGTCAATTCTGCAACAAGTGAGAAACTTTCTGAAATGGATTGGATGAAGAATATTCAAATCTGTGAGTTAGTTGCTCGTGATCATAGGCAAGCTAGAGATGTCATTAAAGCTATCAAAAAACGACTGGGGAGTAAACATGCAAATTCTCAACTTTATGCAGTTATGTTGTTGGAGATGTTGATGAACAATATAGGAGAACATATTCATAAGCAGGTGATTGATACTGGGCTTCTTCCTAGCCTAGTCAAGATAGTCAAGAAAAAGTCAGACTTGCCAGTGCGAGAACGCATATTTCTACTTCTAGATGCCACTCAGACATCCCTTGGTGGTGCTTCTGGAAAATTCCCCCAGTATTATACTGCTTATTATGATTTGGTGAGTGCTGGACTAGAGTTCCCTCAAAGGCCTCATCTGGTGCCTCCGAATCCCTCACCACAATCAACTAAGAGTAATTTGCCTAACGGGGAATTAGCATCATCTATACCTGAAGGGTTTGCTCCACAAGCGGAGCCACATATTGTTCCTGAATCTAGTATTATTCAGAAGGCAAGTAATGCATTGGAGGTCTTGAGAGAAGTGCTTGATGCTGTTGATGGTCAGCGTCCTGAGGCAGCAAAAGATGAGTTCACACTTGATCTTGTGGAACAATGTTCATTCCAAAAGCAAAAAGTTATGCATCTAGTGATGACTTCTCGGGATGAGAAGGCAGTTTCTCGAGCTATTGAATTAAATGAGCAGCTCCAGAAGGTTCTTGCAAGACATGATGCCCTTCTTTCTTGTAAGCCTACATCAACTGTGAACCATCTTAACCAAGATCAGGCAGAGGAGGAAGAGGAGGCTGAACAGCTTTTCCGAAGGCTACGGAAAGGAAAAGCATGTGTGAGACCTGAGGATGAAGAGCAATCAGCTGAGCGCCCTCATTTGGGCTTGCTTGGATCATCCCAGCCAGGAGAAAGGCTTAACCGTCCACTTATACGACCACTTTGTTTGGAGCCACCGCAGGAATCAAATGGGCATCTTCCACCTGTTGCAATTCCACCCCCACCTGCAAAACACATTGAGAGGGAAAAGTACTTTCAGGAAACCAAGATGGACGGTTCTGGTTTGGCTGGCCACGTGAGGGGTCTGTCATTACATAGTCGCAATGCCAGTAGCTCTCGCAGTGGAAGCATGGATTTCAGTGATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005623 GO:0005886 GO:0016020 GO:0044464 GO:0071944
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GAT VHS

Protein Analysis

401

Amino Acids

44.47

Weight (kDa)

6.3

Isoelectric Point (pI)

62.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 217, 1069
Acc36I ACCTGC 2 cut(s) 217, 1069
AccB1I GGYRCC 1 cut(s) 430
AciI CCGC 2 cut(s) 521, 1013
AclWI GGATC 1 cut(s) 958
AcoI YGGCCR 1 cut(s) 1126
AcsI RAATTY 2 cut(s) 157, 356
AcuI CTGAAG 1 cut(s) 522
AcvI CACGTG 1 cut(s) 1132
AfaI GTAC 1 cut(s) 1088
AfiI CCNNNNNNNGG 4 cut(s) 832, 937, 938, 1135
AgsI TTSAA 2 cut(s) 71, 740
AjnI CCWGG 1 cut(s) 961
AloI GAACNNNNNNTCC 2 cut(s) 849, 881
AluBI AGCT 8 cut(s) 13, 107, 125, 734, 754, 862, 923, 1170
AluI AGCT 8 cut(s) 13, 107, 125, 734, 754, 862, 923, 1170
Alw26I GTCTC 1 cut(s) 892
AlwI GGATC 1 cut(s) 958
Ama87I CYCGRG 2 cut(s) 708, 729
AoxI GGCC 2 cut(s) 419, 1126
ApeKI GCWGC 3 cut(s) 5, 626, 751
ApoI RAATTY 2 cut(s) 157, 356
Asp700I GAANNNNTTC 1 cut(s) 216
AspLEI GCGC 1 cut(s) 930
AsuHPI GGTGA 3 cut(s) 241, 403, 438
AvaI CYCGRG 2 cut(s) 708, 729
AxyI CCTNAGG 2 cut(s) 621, 903
BalI TGGCCA 1 cut(s) 1128
BanI GGYRCC 1 cut(s) 430
BauI CACGAG 1 cut(s) 90
BbrPI CACGTG 1 cut(s) 1132
BbvI GCAGC 2 cut(s) 638, 763
BccI CCATC 3 cut(s) 602, 825, 1099
BciT130I CCWGG 1 cut(s) 963
BclI TGATCA 1 cut(s) 94
BcoDI GTCTC 1 cut(s) 892
BfaI CTAG 7 cut(s) 108, 252, 257, 317, 404, 546, 695
BfoI RGCGCY 1 cut(s) 931
BfuAI ACCTGC 2 cut(s) 217, 1069
BisI GCNGC 3 cut(s) 6, 627, 752
BlpI GCTNAGC 1 cut(s) 924
BlsI GCNGC 3 cut(s) 7, 628, 753
BmcAI AGTACT 1 cut(s) 1088
Bme1390I CCNGG 1 cut(s) 963
BmeT110I CYCGRG 2 cut(s) 708, 729
BmiI GGNNCC 3 cut(s) 432, 525, 1008
BmrFI CCNGG 1 cut(s) 963
BmrI ACTGGG 3 cut(s) 149, 249, 358
BmsI GCATC 6 cut(s) 310, 497, 589, 700, 769, 1039
BmuI ACTGGG 3 cut(s) 149, 249, 358
BpmI CTGGAG 1 cut(s) 740
Bpu1102I GCTNAGC 1 cut(s) 924
BpuEI CTTGAG 1 cut(s) 604
BsaAI YACGTR 1 cut(s) 1132
BsaI GGTCTC 1 cut(s) 892
BsaJI CCNNGG 1 cut(s) 337
Bsc4I CCNNNNNNNGG 4 cut(s) 832, 937, 938, 1135
Bse1I ACTGG 5 cut(s) 144, 244, 290, 364, 1164
Bse21I CCTNAGG 2 cut(s) 621, 903
Bse3DI GCAATG 1 cut(s) 1165
BseBI CCWGG 1 cut(s) 963
BseDI CCNNGG 1 cut(s) 337
BseGI GGATG 5 cut(s) 63, 332, 718, 913, 953
BseLI CCNNNNNNNGG 4 cut(s) 832, 937, 938, 1135
BseMI GCAATG 1 cut(s) 1165
BseMII CTCAG 4 cut(s) 341, 612, 894, 915
BseNI ACTGG 5 cut(s) 144, 244, 290, 364, 1164
BseRI GAGGAG 2 cut(s) 854, 863
BseXI GCAGC 2 cut(s) 638, 763
BseYI CCCAGC 1 cut(s) 957
BshFI GGCC 2 cut(s) 421, 1128
BshNI GGYRCC 1 cut(s) 430
BsiHKCI CYCGRG 2 cut(s) 708, 729
BslI CCNNNNNNNGG 4 cut(s) 832, 937, 938, 1135
BsmAI GTCTC 1 cut(s) 892
BsnI GGCC 2 cut(s) 421, 1128
Bso31I GGTCTC 1 cut(s) 892
BsoBI CYCGRG 2 cut(s) 708, 729
Bsp143I GATC 4 cut(s) 94, 649, 829, 950
Bsp1720I GCTNAGC 1 cut(s) 924
BspACI CCGC 2 cut(s) 521, 1013
BspANI GGCC 2 cut(s) 421, 1128
BspCNI CTCAG 4 cut(s) 340, 613, 895, 916
BspLI GGNNCC 3 cut(s) 432, 525, 1008
BspMI ACCTGC 2 cut(s) 217, 1069
BspPI GGATC 1 cut(s) 958
BspQI GCTCTTC 1 cut(s) 906
BspT107I GGYRCC 1 cut(s) 430
BspTNI GGTCTC 1 cut(s) 892
BsrDI GCAATG 1 cut(s) 1165
BsrI ACTGG 5 cut(s) 144, 244, 290, 364, 1164
BssECI CCNNGG 1 cut(s) 337
BssMI GATC 4 cut(s) 94, 649, 829, 950
BssSI CACGAG 1 cut(s) 90
BssT1I CCWWGG 1 cut(s) 337
Bst2BI CACGAG 1 cut(s) 90
Bst2UI CCWGG 1 cut(s) 963
Bst4CI ACNGT 3 cut(s) 811, 980, 1112
Bst6I CTCTTC 2 cut(s) 840, 906
BstAPI GCANNNNNTGC 1 cut(s) 569
BstBAI YACGTR 1 cut(s) 1132
BstC8I GCNNGC 3 cut(s) 105, 944, 1126
BstDEI CTNAG 5 cut(s) 327, 459, 621, 903, 924
BstF5I GGATG 5 cut(s) 63, 332, 718, 913, 953
BstH2I RGCGCY 1 cut(s) 931
BstHHI GCGC 1 cut(s) 930
BstKTI GATC 4 cut(s) 97, 652, 832, 953
BstMAI GTCTC 1 cut(s) 892
BstMBI GATC 4 cut(s) 94, 649, 829, 950
BstMWI GCNNNNNNNGC 3 cut(s) 518, 569, 1182
BstNI CCWGG 1 cut(s) 963
BstNSI RCATGY 2 cut(s) 155, 894
BstSCI CCNGG 1 cut(s) 961
BstV1I GCAGC 2 cut(s) 638, 763
Bsu36I CCTNAGG 2 cut(s) 621, 903
BsuRI GGCC 2 cut(s) 421, 1128
BtsCI GGATG 5 cut(s) 63, 332, 718, 913, 953
BtsI GCAGTG 1 cut(s) 1183
BtsIMutI CAGTG 3 cut(s) 297, 1183, 1201
BveI ACCTGC 2 cut(s) 217, 1069
Cac8I GCNNGC 3 cut(s) 105, 944, 1126
CfoI GCGC 1 cut(s) 930
CseI GACGC 1 cut(s) 605
Csp6I GTAC 1 cut(s) 1087
CspCI CAANNNNNGTGG 2 cut(s) 984, 1019
CviAII CATG 4 cut(s) 152, 776, 891, 1186
CviQI GTAC 1 cut(s) 1087
DdeI CTNAG 5 cut(s) 327, 459, 621, 903, 924
DpnI GATC 4 cut(s) 96, 651, 831, 952
DpnII GATC 4 cut(s) 94, 649, 829, 950
EaeI YGGCCR 1 cut(s) 1126
Eam1104I CTCTTC 2 cut(s) 840, 906
EarI CTCTTC 2 cut(s) 840, 906
Eco130I CCWWGG 1 cut(s) 337
Eco147I AGGCCT 1 cut(s) 421
Eco31I GGTCTC 1 cut(s) 892
Eco57I CTGAAG 1 cut(s) 522
Eco72I CACGTG 1 cut(s) 1132
Eco81I CCTNAGG 2 cut(s) 621, 903
Eco88I CYCGRG 2 cut(s) 708, 729
EcoRII CCWGG 1 cut(s) 961
EcoT14I CCWWGG 1 cut(s) 337
EcoT22I ATGCAT 2 cut(s) 574, 693
ErhI CCWWGG 1 cut(s) 337
FaeI CATG 4 cut(s) 155, 779, 894, 1189
FalI AAGNNNNNCTT 2 cut(s) 269, 301
FatI CATG 4 cut(s) 151, 775, 890, 1185
FbaI TGATCA 1 cut(s) 94
Fnu4HI GCNGC 3 cut(s) 6, 627, 752
FokI GGATG 5 cut(s) 70, 319, 725, 920, 940
Fsp4HI GCNGC 3 cut(s) 6, 627, 752
FspBI CTAG 7 cut(s) 108, 252, 257, 317, 404, 546, 695
GlaI GCGC 1 cut(s) 929
GluI GCNGC 3 cut(s) 6, 627, 752
GsaI CCCAGC 1 cut(s) 961
GsuI CTGGAG 1 cut(s) 740
HaeII RGCGCY 1 cut(s) 931
HaeIII GGCC 2 cut(s) 421, 1128
HgaI GACGC 1 cut(s) 605
HhaI GCGC 1 cut(s) 930
Hin1II CATG 4 cut(s) 155, 779, 894, 1189
Hin6I GCGC 1 cut(s) 928
HinP1I GCGC 1 cut(s) 928
HinfI GANTC 3 cut(s) 439, 542, 1019
HphI GGTGA 3 cut(s) 241, 403, 438
Hpy166II GTNNAC 4 cut(s) 149, 642, 814, 983
Hpy188I TCNGA 6 cut(s) 46, 283, 330, 438, 558, 869
Hpy8I GTNNAC 4 cut(s) 149, 642, 814, 983
HpyAV CCTTC 6 cut(s) 497, 553, 712, 754, 794, 864
HpyCH4III ACNGT 3 cut(s) 811, 980, 1112
HpyCH4IV ACGT 1 cut(s) 1131
HpyCH4V TGCA 8 cut(s) 26, 155, 173, 572, 691, 770, 1046, 1064
HpyF10VI GCNNNNNNNGC 3 cut(s) 518, 569, 1182
HpyF3I CTNAG 5 cut(s) 327, 459, 621, 903, 924
HpySE526I ACGT 1 cut(s) 1131
Hsp92II CATG 4 cut(s) 155, 779, 894, 1189
HspAI GCGC 1 cut(s) 928
Ksp22I TGATCA 1 cut(s) 94
Kzo9I GATC 4 cut(s) 94, 649, 829, 950
LguI GCTCTTC 1 cut(s) 906
LmnI GCTCC 4 cut(s) 517, 523, 759, 1006
Lsp1109I GCAGC 2 cut(s) 638, 763
LweI GCATC 6 cut(s) 310, 497, 589, 700, 769, 1039
MaeI CTAG 7 cut(s) 108, 252, 257, 317, 404, 546, 695
MaeII ACGT 1 cut(s) 1131
MalI GATC 4 cut(s) 96, 651, 831, 952
MboI GATC 4 cut(s) 94, 649, 829, 950
MboII GAAGA 5 cut(s) 73, 239, 857, 923, 1025
MlsI TGGCCA 1 cut(s) 1128
MluCI AATT 7 cut(s) 19, 157, 356, 466, 482, 740, 1047
MluNI TGGCCA 1 cut(s) 1128
MmeI TCCRAC 1 cut(s) 165
Mox20I TGGCCA 1 cut(s) 1128
Mph1103I ATGCAT 2 cut(s) 574, 693
MroXI GAANNNNTTC 1 cut(s) 216
MscI TGGCCA 1 cut(s) 1128
MseI TTAA 4 cut(s) 120, 743, 822, 975
Msp20I TGGCCA 1 cut(s) 1128
MspA1I CMGCKG 1 cut(s) 923
MspR9I CCNGG 1 cut(s) 963
MvaI CCWGG 1 cut(s) 963
MwoI GCNNNNNNNGC 3 cut(s) 518, 569, 1182
NdeII GATC 4 cut(s) 94, 649, 829, 950
NlaIII CATG 4 cut(s) 155, 779, 894, 1189
NlaIV GGNNCC 3 cut(s) 432, 525, 1008
NmeAIII GCCGAG 1 cut(s) 34
NsiI ATGCAT 2 cut(s) 574, 693
NspI RCATGY 2 cut(s) 155, 894
PaeR7I CTCGAG 1 cut(s) 729
PaqCI CACCTGC 2 cut(s) 217, 1069
PceI AGGCCT 1 cut(s) 421
PciSI GCTCTTC 1 cut(s) 906
PdmI GAANNNNTTC 1 cut(s) 216
PfeI GAWTC 3 cut(s) 439, 542, 1019
PkrI GCNGC 3 cut(s) 7, 628, 753
PmaCI CACGTG 1 cut(s) 1132
PmlI CACGTG 1 cut(s) 1132
Ppu21I YACGTR 1 cut(s) 1132
Psp6I CCWGG 1 cut(s) 961
PspCI CACGTG 1 cut(s) 1132
PspFI CCCAGC 1 cut(s) 957
PspGI CCWGG 1 cut(s) 961
PspN4I GGNNCC 3 cut(s) 432, 525, 1008
PvuII CAGCTG 1 cut(s) 923
RsaI GTAC 1 cut(s) 1088
RsaNI GTAC 1 cut(s) 1087
SapI GCTCTTC 1 cut(s) 906
SaqAI TTAA 4 cut(s) 120, 743, 822, 975
SatI GCNGC 3 cut(s) 6, 627, 752
Sau3AI GATC 4 cut(s) 94, 649, 829, 950
ScaI AGTACT 1 cut(s) 1088
ScrFI CCNGG 1 cut(s) 963
SfaNI GCATC 6 cut(s) 310, 497, 589, 700, 769, 1039
Sfr274I CTCGAG 1 cut(s) 729
SlaI CTCGAG 1 cut(s) 729
SmlI CTYRAG 2 cut(s) 583, 729
SmoI CTYRAG 2 cut(s) 583, 729
Sse9I AATT 7 cut(s) 19, 157, 356, 466, 482, 740, 1047
SseBI AGGCCT 1 cut(s) 421
SsiI CCGC 2 cut(s) 521, 1013
SspI AATATT 1 cut(s) 67
SspMI CTAG 7 cut(s) 108, 252, 257, 317, 404, 546, 695
StuI AGGCCT 1 cut(s) 421
StyD4I CCNGG 1 cut(s) 961
StyI CCWWGG 1 cut(s) 337
TaaI ACNGT 3 cut(s) 811, 980, 1112
TaiI ACGT 1 cut(s) 1134
TaqI TCGA 1 cut(s) 730
TasI AATT 7 cut(s) 19, 157, 356, 466, 482, 740, 1047
TatI WGTACW 1 cut(s) 1086
TfiI GAWTC 3 cut(s) 439, 542, 1019
Tru1I TTAA 4 cut(s) 120, 743, 822, 975
Tru9I TTAA 4 cut(s) 120, 743, 822, 975
TscAI CASTG 3 cut(s) 297, 1183, 1201
TseI GCWGC 3 cut(s) 5, 626, 751
TspDTI ATGAA 5 cut(s) 74, 209, 212, 657, 924
TspGWI ACGGA 1 cut(s) 892
TspRI CASTG 3 cut(s) 297, 1183, 1201
XapI RAATTY 2 cut(s) 157, 356
XbaI TCTAGA 1 cut(s) 316
XceI RCATGY 2 cut(s) 155, 894
XhoI CTCGAG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 216
XspI CTAG 7 cut(s) 108, 252, 257, 317, 404, 546, 695
ZrmI AGTACT 1 cut(s) 1088
Zsp2I ATGCAT 2 cut(s) 574, 693
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.