single fertilization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20970 |
| fragaria_vesca | FvH4_5g26490 FvH4_5g26490 |
| malus_domestica | MD06G1001600.v1.1 |
| prunus_persica | Prupe.5G002400_v2.0.a1 Prupe.5G002400_v2.0.a1 |
| pyrus_communis | pycom06g00170 pycom16g26270 pycom16g26280 |
| rosa_chinensis | RchiOBHm_Chr7g0217401 |
| rosa_laevigata | RLG00000002480 |
| rosa_roxburghii | Rroxscaffold_3G00242210 |
| rosa_rugosa | Rorug07G0168900 |
| rosa_samantha | Rh7AG308500 Rh7BG299200 Rh7CG327800 Rh7DG307800 |
| rosa_wichuraiana | Rw7G026160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 2679 |
| Acc36I | ACCTGC | 1 cut(s) | 3130 |
| Acc65I | GGTACC | 1 cut(s) | 1820 |
| AccB1I | GGYRCC | 2 cut(s) | 445, 1820 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 2272 |
| AccI | GTMKAC | 2 cut(s) | 1338, 1428 |
| AccII | CGCG | 2 cut(s) | 27, 2409 |
| AciI | CCGC | 6 cut(s) | 25, 240, 509, 3338, 3634, 3717 |
| AclWI | GGATC | 6 cut(s) | 206, 219, 419, 477, 527, 2547 |
| AcoI | YGGCCR | 2 cut(s) | 631, 3222 |
| AcsI | RAATTY | 7 cut(s) | 388, 1141, 1520, 1660, 1953, 2089, 2597 |
| AcuI | CTGAAG | 8 cut(s) | 756, 969, 1353, 1443, 1788, 1830, 1986, 2247 |
| AcyI | GRCGYC | 1 cut(s) | 159 |
| AfaI | GTAC | 6 cut(s) | 733, 1780, 1822, 1899, 2735, 2890 |
| AfeI | AGCGCT | 1 cut(s) | 2513 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 271, 2254, 2272, 2916 |
| AflIII | ACRYGT | 2 cut(s) | 1925, 2122 |
| AjnI | CCWGG | 7 cut(s) | 592, 1084, 1599, 1759, 1835, 1983, 2454 |
| Alw21I | GWGCWC | 3 cut(s) | 24, 1534, 3373 |
| Alw26I | GTCTC | 6 cut(s) | 1250, 2238, 2366, 2564, 2893, 3573 |
| Alw44I | GTGCAC | 2 cut(s) | 20, 1530 |
| AlwI | GGATC | 6 cut(s) | 206, 219, 419, 477, 527, 2547 |
| AlwNI | CAGNNNCTG | 4 cut(s) | 992, 1748, 1766, 3149 |
| Aor51HI | AGCGCT | 1 cut(s) | 2513 |
| ApaLI | GTGCAC | 2 cut(s) | 20, 1530 |
| ApoI | RAATTY | 7 cut(s) | 388, 1141, 1520, 1660, 1953, 2089, 2597 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2365, 2397 |
| AseI | ATTAAT | 1 cut(s) | 2288 |
| Asp718I | GGTACC | 1 cut(s) | 1820 |
| AspLEI | GCGC | 4 cut(s) | 1264, 2514, 2680, 2922 |
| AspS9I | GGNCC | 6 cut(s) | 476, 1082, 2181, 2930, 3346, 3667 |
| AsuC2I | CCSGG | 2 cut(s) | 650, 2147 |
| AsuHPI | GGTGA | 5 cut(s) | 68, 321, 884, 3427, 3544 |
| AsuNHI | GCTAGC | 2 cut(s) | 1682, 1724 |
| AvaII | GGWCC | 2 cut(s) | 2930, 3667 |
| BaeGI | GKGCMC | 4 cut(s) | 24, 450, 1176, 1534 |
| BalI | TGGCCA | 2 cut(s) | 633, 3224 |
| BamHI | GGATCC | 1 cut(s) | 211 |
| BanI | GGYRCC | 2 cut(s) | 445, 1820 |
| BanII | GRGCYC | 2 cut(s) | 783, 2946 |
| BauI | CACGAG | 1 cut(s) | 2241 |
| Bbv12I | GWGCWC | 3 cut(s) | 24, 1534, 3373 |
| BbvCI | CCTCAGC | 4 cut(s) | 1074, 2031, 2894, 3384 |
| BccI | CCATC | 9 cut(s) | 206, 734, 971, 976, 1598, 1811, 2530, 2909, 3620 |
| BceAI | ACGGC | 4 cut(s) | 21, 253, 574, 1619 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 2387, 2421 |
| BciT130I | CCWGG | 7 cut(s) | 594, 1086, 1601, 1761, 1837, 1985, 2456 |
| BciVI | GTATCC | 3 cut(s) | 1090, 2143, 2269 |
| BclI | TGATCA | 1 cut(s) | 724 |
| BcnI | CCSGG | 2 cut(s) | 650, 2147 |
| BcoDI | GTCTC | 6 cut(s) | 1250, 2238, 2366, 2564, 2893, 3573 |
| BfaI | CTAG | 6 cut(s) | 1032, 1683, 1725, 2220, 2451, 3264 |
| BfmI | CTRYAG | 1 cut(s) | 2649 |
| BfoI | RGCGCY | 2 cut(s) | 2515, 2923 |
| BfuAI | ACCTGC | 1 cut(s) | 3130 |
| BfuI | GTATCC | 3 cut(s) | 1090, 2143, 2269 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 3230 |
| BglII | AGATCT | 2 cut(s) | 1961, 2222 |
| BmcAI | AGTACT | 1 cut(s) | 733 |
| Bme1390I | CCNGG | 9 cut(s) | 594, 650, 1086, 1601, 1761, 1837, 1985, 2147, 2456 |
| Bme18I | GGWCC | 2 cut(s) | 2930, 3667 |
| BmgT120I | GGNCC | 6 cut(s) | 476, 1082, 2181, 2930, 3346, 3667 |
| BmiI | GGNNCC | 6 cut(s) | 213, 447, 1822, 2070, 2943, 3668 |
| BmrFI | CCNGG | 9 cut(s) | 594, 650, 1086, 1601, 1761, 1837, 1985, 2147, 2456 |
| BmrI | ACTGGG | 1 cut(s) | 1109 |
| BmtI | GCTAGC | 2 cut(s) | 1686, 1728 |
| BmuI | ACTGGG | 1 cut(s) | 1109 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2661 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1534, 1566 |
| BpmI | CTGGAG | 4 cut(s) | 576, 3308, 3471, 3504 |
| Bpu10I | CCTNAGC | 4 cut(s) | 1074, 2031, 2894, 3384 |
| BpuEI | CTTGAG | 3 cut(s) | 747, 1067, 2565 |
| BpuMI | CCSGG | 2 cut(s) | 650, 2147 |
| BsaBI | GATNNNNATC | 1 cut(s) | 423 |
| BsaHI | GRCGYC | 1 cut(s) | 159 |
| BsaI | GGTCTC | 3 cut(s) | 2238, 2366, 3573 |
| BsaWI | WCCGGW | 1 cut(s) | 185 |
| BsaXI | ACNNNNNCTCC | 6 cut(s) | 149, 179, 279, 309, 3502, 3532 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 271, 2254, 2272, 2916 |
| Bse1I | ACTGG | 2 cut(s) | 438, 1115 |
| Bse3DI | GCAATG | 2 cut(s) | 715, 3718 |
| Bse8I | GATNNNNATC | 1 cut(s) | 423 |
| BseBI | CCWGG | 7 cut(s) | 594, 1086, 1601, 1761, 1837, 1985, 2456 |
| BseJI | GATNNNNATC | 1 cut(s) | 423 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 271, 2254, 2272, 2916 |
| BseMI | GCAATG | 2 cut(s) | 715, 3718 |
| BseNI | ACTGG | 2 cut(s) | 438, 1115 |
| BseRI | GAGGAG | 5 cut(s) | 157, 2911, 2954, 3305, 3401 |
| BseSI | GKGCMC | 4 cut(s) | 24, 450, 1176, 1534 |
| BseYI | CCCAGC | 4 cut(s) | 1294, 1384, 1474, 3142 |
| BsgI | GTGCAG | 1 cut(s) | 2223 |
| Bsh1236I | CGCG | 2 cut(s) | 27, 2409 |
| BshNI | GGYRCC | 2 cut(s) | 445, 1820 |
| BsiHKAI | GWGCWC | 3 cut(s) | 24, 1534, 3373 |
| BsiSI | CCGG | 3 cut(s) | 186, 650, 2146 |
| BslFI | GGGAC | 3 cut(s) | 300, 704, 1003 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 271, 2254, 2272, 2916 |
| BsmAI | GTCTC | 6 cut(s) | 1250, 2238, 2366, 2564, 2893, 3573 |
| BsmFI | GGGAC | 3 cut(s) | 300, 704, 1003 |
| BsmI | GAATGC | 2 cut(s) | 1051, 2314 |
| Bso31I | GGTCTC | 3 cut(s) | 2238, 2366, 3573 |
| Bsp1286I | GDGCHC | 7 cut(s) | 24, 450, 783, 1176, 1534, 2946, 3373 |
| Bsp1407I | TGTACA | 1 cut(s) | 1897 |
| Bsp143I | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| Bsp68I | TCGCGA | 1 cut(s) | 2409 |
| BspACI | CCGC | 6 cut(s) | 25, 240, 509, 3338, 3634, 3717 |
| BspFNI | CGCG | 2 cut(s) | 27, 2409 |
| BspHI | TCATGA | 1 cut(s) | 580 |
| BspLI | GGNNCC | 6 cut(s) | 213, 447, 1822, 2070, 2943, 3668 |
| BspMAI | CTGCAG | 1 cut(s) | 2653 |
| BspMI | ACCTGC | 1 cut(s) | 3130 |
| BspOI | GCTAGC | 2 cut(s) | 1686, 1728 |
| BspPI | GGATC | 6 cut(s) | 206, 219, 419, 477, 527, 2547 |
| BspQI | GCTCTTC | 1 cut(s) | 2502 |
| BspT107I | GGYRCC | 2 cut(s) | 445, 1820 |
| BspTNI | GGTCTC | 3 cut(s) | 2238, 2366, 3573 |
| BsrDI | GCAATG | 2 cut(s) | 715, 3718 |
| BsrGI | TGTACA | 1 cut(s) | 1897 |
| BsrI | ACTGG | 2 cut(s) | 438, 1115 |
| BssMI | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| BssNI | GRCGYC | 1 cut(s) | 159 |
| BssSI | CACGAG | 1 cut(s) | 2241 |
| BssT1I | CCWWGG | 5 cut(s) | 150, 543, 2976, 3306, 3656 |
| Bst2BI | CACGAG | 1 cut(s) | 2241 |
| Bst2UI | CCWGG | 7 cut(s) | 594, 1086, 1601, 1761, 1837, 1985, 2456 |
| Bst6I | CTCTTC | 8 cut(s) | 1010, 1858, 2223, 2452, 2502, 3210, 3404, 3630 |
| BstACI | GRCGYC | 1 cut(s) | 159 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 2753 |
| BstAUI | TGTACA | 1 cut(s) | 1897 |
| BstC8I | GCNNGC | 9 cut(s) | 563, 567, 645, 746, 1684, 1726, 1730, 1734, 1871 |
| BstDSI | CCRYGG | 1 cut(s) | 450 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2252 |
| BstFNI | CGCG | 2 cut(s) | 27, 2409 |
| BstH2I | RGCGCY | 2 cut(s) | 2515, 2923 |
| BstHHI | GCGC | 4 cut(s) | 1264, 2514, 2680, 2922 |
| BstKTI | GATC | 9 cut(s) | 214, 232, 427, 472, 535, 727, 1964, 2225, 2542 |
| BstMAI | GTCTC | 6 cut(s) | 1250, 2238, 2366, 2564, 2893, 3573 |
| BstMBI | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| BstNI | CCWGG | 7 cut(s) | 594, 1086, 1601, 1761, 1837, 1985, 2456 |
| BstNSI | RCATGY | 1 cut(s) | 1929 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2661 |
| BstSCI | CCNGG | 9 cut(s) | 592, 648, 1084, 1599, 1759, 1835, 1983, 2145, 2454 |
| BstSFI | CTRYAG | 1 cut(s) | 2649 |
| BstSLI | GKGCMC | 4 cut(s) | 24, 450, 1176, 1534 |
| BstUI | CGCG | 2 cut(s) | 27, 2409 |
| BstX2I | RGATCY | 6 cut(s) | 211, 424, 469, 1961, 2222, 2539 |
| BstYI | RGATCY | 6 cut(s) | 211, 424, 469, 1961, 2222, 2539 |
| BsuI | GTATCC | 3 cut(s) | 1090, 2143, 2269 |
| BtgI | CCRYGG | 1 cut(s) | 450 |
| BtgZI | GCGATG | 3 cut(s) | 42, 207, 3564 |
| BtsIMutI | CAGTG | 4 cut(s) | 714, 966, 1944, 3000 |
| BtuMI | TCGCGA | 1 cut(s) | 2409 |
| BveI | ACCTGC | 1 cut(s) | 3130 |
| Cac8I | GCNNGC | 9 cut(s) | 563, 567, 645, 746, 1684, 1726, 1730, 1734, 1871 |
| CaiI | CAGNNNCTG | 4 cut(s) | 992, 1748, 1766, 3149 |
| CciI | TCATGA | 1 cut(s) | 580 |
| CfoI | GCGC | 4 cut(s) | 1264, 2514, 2680, 2922 |
| Cfr13I | GGNCC | 6 cut(s) | 476, 1082, 2181, 2930, 3346, 3667 |
| CseI | GACGC | 1 cut(s) | 167 |
| Csp6I | GTAC | 6 cut(s) | 732, 1779, 1821, 1898, 2734, 2889 |
| CviAII | CATG | 9 cut(s) | 271, 491, 581, 758, 828, 1926, 2267, 2314, 2369 |
| CviQI | GTAC | 6 cut(s) | 732, 1779, 1821, 1898, 2734, 2889 |
| DpnI | GATC | 9 cut(s) | 213, 231, 426, 471, 534, 726, 1963, 2224, 2541 |
| DpnII | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| DraI | TTTAAA | 2 cut(s) | 1236, 3733 |
| EaeI | YGGCCR | 2 cut(s) | 631, 3222 |
| Eam1104I | CTCTTC | 8 cut(s) | 1010, 1858, 2223, 2452, 2502, 3210, 3404, 3630 |
| EarI | CTCTTC | 8 cut(s) | 1010, 1858, 2223, 2452, 2502, 3210, 3404, 3630 |
| Eco130I | CCWWGG | 5 cut(s) | 150, 543, 2976, 3306, 3656 |
| Eco24I | GRGCYC | 2 cut(s) | 783, 2946 |
| Eco31I | GGTCTC | 3 cut(s) | 2238, 2366, 3573 |
| Eco32I | GATATC | 2 cut(s) | 1581, 1623 |
| Eco47I | GGWCC | 2 cut(s) | 2930, 3667 |
| Eco47III | AGCGCT | 1 cut(s) | 2513 |
| Eco57I | CTGAAG | 8 cut(s) | 756, 969, 1353, 1443, 1788, 1830, 1986, 2247 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2252 |
| EcoO109I | RGGNCCY | 1 cut(s) | 3667 |
| EcoRI | GAATTC | 3 cut(s) | 388, 1141, 1953 |
| EcoRII | CCWGG | 7 cut(s) | 592, 1084, 1599, 1759, 1835, 1983, 2454 |
| EcoRV | GATATC | 2 cut(s) | 1581, 1623 |
| EcoT14I | CCWWGG | 5 cut(s) | 150, 543, 2976, 3306, 3656 |
| EcoT38I | GRGCYC | 2 cut(s) | 783, 2946 |
| ErhI | CCWWGG | 5 cut(s) | 150, 543, 2976, 3306, 3656 |
| FaeI | CATG | 9 cut(s) | 274, 494, 584, 761, 831, 1929, 2270, 2317, 2372 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2170, 2202 |
| FaqI | GGGAC | 3 cut(s) | 300, 704, 1003 |
| FatI | CATG | 9 cut(s) | 270, 490, 580, 757, 827, 1925, 2266, 2313, 2368 |
| FbaI | TGATCA | 1 cut(s) | 724 |
| FblI | GTMKAC | 2 cut(s) | 1338, 1428 |
| FriOI | GRGCYC | 2 cut(s) | 783, 2946 |
| FspAI | RTGCGCAY | 1 cut(s) | 2679 |
| FspBI | CTAG | 6 cut(s) | 1032, 1683, 1725, 2220, 2451, 3264 |
| FspI | TGCGCA | 1 cut(s) | 2679 |
| GlaI | GCGC | 4 cut(s) | 1263, 2513, 2679, 2921 |
| GsaI | CCCAGC | 4 cut(s) | 1298, 1388, 1478, 3146 |
| GsuI | CTGGAG | 4 cut(s) | 576, 3308, 3471, 3504 |
| HaeII | RGCGCY | 2 cut(s) | 2515, 2923 |
| HapII | CCGG | 3 cut(s) | 186, 650, 2146 |
| HgaI | GACGC | 1 cut(s) | 167 |
| HhaI | GCGC | 4 cut(s) | 1264, 2514, 2680, 2922 |
| Hin1I | GRCGYC | 1 cut(s) | 159 |
| Hin1II | CATG | 9 cut(s) | 274, 494, 584, 761, 831, 1929, 2270, 2317, 2372 |
| Hin6I | GCGC | 4 cut(s) | 1262, 2512, 2678, 2920 |
| HinP1I | GCGC | 4 cut(s) | 1262, 2512, 2678, 2920 |
| HincII | GTYRAC | 3 cut(s) | 796, 973, 1197 |
| HindII | GTYRAC | 3 cut(s) | 796, 973, 1197 |
| HindIII | AAGCTT | 3 cut(s) | 877, 2481, 2670 |
| HpaII | CCGG | 3 cut(s) | 186, 650, 2146 |
| HphI | GGTGA | 5 cut(s) | 68, 321, 884, 3427, 3544 |
| Hpy99I | CGWCG | 2 cut(s) | 161, 350 |
| HpyCH4IV | ACGT | 3 cut(s) | 93, 1914, 2124 |
| HpySE526I | ACGT | 3 cut(s) | 93, 1914, 2124 |
| Hsp92I | GRCGYC | 1 cut(s) | 159 |
| Hsp92II | CATG | 9 cut(s) | 274, 494, 584, 761, 831, 1929, 2270, 2317, 2372 |
| HspAI | GCGC | 4 cut(s) | 1262, 2512, 2678, 2920 |
| KpnI | GGTACC | 1 cut(s) | 1824 |
| Ksp22I | TGATCA | 1 cut(s) | 724 |
| Kzo9I | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| LguI | GCTCTTC | 1 cut(s) | 2502 |
| LmnI | GCTCC | 3 cut(s) | 2941, 3490, 3728 |
| MaeI | CTAG | 6 cut(s) | 1032, 1683, 1725, 2220, 2451, 3264 |
| MaeII | ACGT | 3 cut(s) | 93, 1914, 2124 |
| MaeIII | GTNAC | 7 cut(s) | 181, 787, 1186, 1910, 2118, 2575, 3556 |
| MalI | GATC | 9 cut(s) | 213, 231, 426, 471, 534, 726, 1963, 2224, 2541 |
| MboI | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| MfeI | CAATTG | 2 cut(s) | 1356, 1446 |
| MflI | RGATCY | 6 cut(s) | 211, 424, 469, 1961, 2222, 2539 |
| MhlI | GDGCHC | 7 cut(s) | 24, 450, 783, 1176, 1534, 2946, 3373 |
| MlsI | TGGCCA | 2 cut(s) | 633, 3224 |
| MluNI | TGGCCA | 2 cut(s) | 633, 3224 |
| MlyI | GAGTC | 6 cut(s) | 158, 230, 383, 491, 1844, 1949 |
| MmeI | TCCRAC | 1 cut(s) | 527 |
| Mox20I | TGGCCA | 2 cut(s) | 633, 3224 |
| MscI | TGGCCA | 2 cut(s) | 633, 3224 |
| MslI | CAYNNNNRTG | 1 cut(s) | 27 |
| Msp20I | TGGCCA | 2 cut(s) | 633, 3224 |
| MspA1I | CMGCKG | 1 cut(s) | 605 |
| MspI | CCGG | 3 cut(s) | 186, 650, 2146 |
| MspR9I | CCNGG | 9 cut(s) | 594, 650, 1086, 1601, 1761, 1837, 1985, 2147, 2456 |
| MunI | CAATTG | 2 cut(s) | 1356, 1446 |
| Mva1269I | GAATGC | 2 cut(s) | 1051, 2314 |
| MvaI | CCWGG | 7 cut(s) | 594, 1086, 1601, 1761, 1837, 1985, 2456 |
| MvnI | CGCG | 2 cut(s) | 27, 2409 |
| NciI | CCSGG | 2 cut(s) | 650, 2147 |
| NdeII | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| NheI | GCTAGC | 2 cut(s) | 1682, 1724 |
| NlaIII | CATG | 9 cut(s) | 274, 494, 584, 761, 831, 1929, 2270, 2317, 2372 |
| NlaIV | GGNNCC | 6 cut(s) | 213, 447, 1822, 2070, 2943, 3668 |
| NmeAIII | GCCGAG | 1 cut(s) | 453 |
| NmuCI | GTSAC | 3 cut(s) | 181, 1910, 2575 |
| NruI | TCGCGA | 1 cut(s) | 2409 |
| NsbI | TGCGCA | 1 cut(s) | 2679 |
| NspI | RCATGY | 1 cut(s) | 1929 |
| PagI | TCATGA | 1 cut(s) | 580 |
| PciI | ACATGT | 1 cut(s) | 1925 |
| PciSI | GCTCTTC | 1 cut(s) | 2502 |
| PctI | GAATGC | 2 cut(s) | 1051, 2314 |
| PfeI | GAWTC | 7 cut(s) | 38, 494, 1646, 1832, 1840, 3038, 3479 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 2272 |
| PfoI | TCCNGGA | 2 cut(s) | 592, 1835 |
| PleI | GAGTC | 6 cut(s) | 158, 229, 382, 490, 1844, 1948 |
| PpsI | GAGTC | 6 cut(s) | 158, 229, 382, 490, 1844, 1948 |
| PpuMI | RGGWCCY | 1 cut(s) | 3667 |
| PscI | ACATGT | 1 cut(s) | 1925 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2661 |
| PshBI | ATTAAT | 1 cut(s) | 2288 |
| Psp5II | RGGWCCY | 1 cut(s) | 3667 |
| Psp6I | CCWGG | 7 cut(s) | 592, 1084, 1599, 1759, 1835, 1983, 2454 |
| PspFI | CCCAGC | 4 cut(s) | 1294, 1384, 1474, 3142 |
| PspGI | CCWGG | 7 cut(s) | 592, 1084, 1599, 1759, 1835, 1983, 2454 |
| PspN4I | GGNNCC | 6 cut(s) | 213, 447, 1822, 2070, 2943, 3668 |
| PspPI | GGNCC | 6 cut(s) | 476, 1082, 2181, 2930, 3346, 3667 |
| PspPPI | RGGWCCY | 1 cut(s) | 3667 |
| PstI | CTGCAG | 1 cut(s) | 2653 |
| PstNI | CAGNNNCTG | 4 cut(s) | 992, 1748, 1766, 3149 |
| PsuI | RGATCY | 6 cut(s) | 211, 424, 469, 1961, 2222, 2539 |
| PvuII | CAGCTG | 1 cut(s) | 605 |
| RruI | TCGCGA | 1 cut(s) | 2409 |
| RsaI | GTAC | 6 cut(s) | 733, 1780, 1822, 1899, 2735, 2890 |
| RsaNI | GTAC | 6 cut(s) | 732, 1779, 1821, 1898, 2734, 2889 |
| RseI | CAYNNNNRTG | 1 cut(s) | 27 |
| SapI | GCTCTTC | 1 cut(s) | 2502 |
| Sau3AI | GATC | 9 cut(s) | 211, 229, 424, 469, 532, 724, 1961, 2222, 2539 |
| Sau96I | GGNCC | 6 cut(s) | 476, 1082, 2181, 2930, 3346, 3667 |
| ScaI | AGTACT | 1 cut(s) | 733 |
| SchI | GAGTC | 6 cut(s) | 158, 230, 383, 491, 1844, 1949 |
| ScrFI | CCNGG | 9 cut(s) | 594, 650, 1086, 1601, 1761, 1837, 1985, 2147, 2456 |
| SduI | GDGCHC | 7 cut(s) | 24, 450, 783, 1176, 1534, 2946, 3373 |
| SfcI | CTRYAG | 1 cut(s) | 2649 |
| SinI | GGWCC | 2 cut(s) | 2930, 3667 |
| SmiMI | CAYNNNNRTG | 1 cut(s) | 27 |
| SmlI | CTYRAG | 3 cut(s) | 762, 1046, 2580 |
| SmoI | CTYRAG | 3 cut(s) | 762, 1046, 2580 |
| SsiI | CCGC | 6 cut(s) | 25, 240, 509, 3338, 3634, 3717 |
| SspI | AATATT | 1 cut(s) | 2723 |
| SspMI | CTAG | 6 cut(s) | 1032, 1683, 1725, 2220, 2451, 3264 |
| StyD4I | CCNGG | 9 cut(s) | 592, 648, 1084, 1599, 1759, 1835, 1983, 2145, 2454 |
| StyI | CCWWGG | 5 cut(s) | 150, 543, 2976, 3306, 3656 |
| TaiI | ACGT | 3 cut(s) | 96, 1917, 2127 |
| TaqI | TCGA | 2 cut(s) | 359, 485 |
| TatI | WGTACW | 3 cut(s) | 731, 1778, 1897 |
| TauI | GCSGC | 2 cut(s) | 243, 3720 |
| TfiI | GAWTC | 7 cut(s) | 38, 494, 1646, 1832, 1840, 3038, 3479 |
| TscAI | CASTG | 4 cut(s) | 721, 973, 1951, 3000 |
| TseFI | GTSAC | 3 cut(s) | 181, 1910, 2575 |
| Tsp45I | GTSAC | 3 cut(s) | 181, 1910, 2575 |
| TspGWI | ACGGA | 3 cut(s) | 1272, 1965, 2846 |
| TspRI | CASTG | 4 cut(s) | 721, 973, 1951, 3000 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 2272 |
| VneI | GTGCAC | 2 cut(s) | 20, 1530 |
| VpaK11BI | GGWCC | 2 cut(s) | 2930, 3667 |
| VspI | ATTAAT | 1 cut(s) | 2288 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2252 |
| XapI | RAATTY | 7 cut(s) | 388, 1141, 1520, 1660, 1953, 2089, 2597 |
| XceI | RCATGY | 1 cut(s) | 1929 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 550, 2170, 2983 |
| XmiI | GTMKAC | 2 cut(s) | 1338, 1428 |
| XspI | CTAG | 6 cut(s) | 1032, 1683, 1725, 2220, 2451, 3264 |
| ZrmI | AGTACT | 1 cut(s) | 733 |