single fertilization
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G20970 |
| fragaria_vesca | FvH4_5g26490 FvH4_5g26490 |
| malus_domestica | MD06G1001600.v1.1 |
| prunus_persica | Prupe.5G002400_v2.0.a1 Prupe.5G002400_v2.0.a1 |
| pyrus_communis | pycom06g00170 pycom16g26270 pycom16g26280 |
| rosa_chinensis | RchiOBHm_Chr7g0217401 |
| rosa_laevigata | RLG00000002480 |
| rosa_roxburghii | Rroxscaffold_3G00242210 |
| rosa_rugosa | Rorug07G0168900 |
| rosa_samantha | Rh7AG308500 Rh7BG299200 Rh7CG327800 Rh7DG307800 |
| rosa_wichuraiana | Rw7G026160 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 3298 |
| AatII | GACGTC | 1 cut(s) | 924 |
| Acc36I | ACCTGC | 2 cut(s) | 3298, 3367 |
| AccB7I | CCANNNNNTGG | 8 cut(s) | 748, 835, 883, 931, 1018, 1105, 1192, 1279 |
| AccBSI | CCGCTC | 1 cut(s) | 3264 |
| AccII | CGCG | 1 cut(s) | 27 |
| AccIII | TCCGGA | 1 cut(s) | 3198 |
| AclWI | GGATC | 7 cut(s) | 350, 491, 592, 597, 1450, 2871, 2889 |
| AcsI | RAATTY | 2 cut(s) | 1885, 1918 |
| AcyI | GRCGYC | 2 cut(s) | 162, 921 |
| AfaI | GTAC | 5 cut(s) | 568, 1641, 3021, 3077, 3232 |
| AflII | CTTAAG | 1 cut(s) | 2797 |
| AgeI | ACCGGT | 2 cut(s) | 2239, 3892 |
| AjnI | CCWGG | 4 cut(s) | 2088, 3224, 3317, 3698 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 702, 734 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 420, 452 |
| Alw21I | GWGCWC | 2 cut(s) | 1233, 2541 |
| Alw26I | GTCTC | 4 cut(s) | 209, 1760, 2708, 3842 |
| AlwI | GGATC | 7 cut(s) | 350, 491, 592, 597, 1450, 2871, 2889 |
| AlwNI | CAGNNNCTG | 5 cut(s) | 365, 1769, 2273, 2327, 3500 |
| Ama87I | CYCGRG | 1 cut(s) | 2148 |
| Aor13HI | TCCGGA | 1 cut(s) | 3198 |
| ApoI | RAATTY | 2 cut(s) | 1885, 1918 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 2707, 2739 |
| AseI | ATTAAT | 5 cut(s) | 804, 987, 1074, 1248, 3813 |
| AsiGI | ACCGGT | 2 cut(s) | 2239, 3892 |
| AspLEI | GCGC | 2 cut(s) | 2911, 3925 |
| AspS9I | GGNCC | 6 cut(s) | 418, 1517, 2523, 3272, 3691, 3912 |
| AsuC2I | CCSGG | 1 cut(s) | 2489 |
| AsuHPI | GGTGA | 4 cut(s) | 26, 139, 860, 3907 |
| AvaI | CYCGRG | 1 cut(s) | 2148 |
| AvaII | GGWCC | 3 cut(s) | 418, 3272, 3912 |
| AxyI | CCTNAGG | 1 cut(s) | 1722 |
| BaeGI | GKGCMC | 1 cut(s) | 1861 |
| BalI | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| BanII | GRGCYC | 5 cut(s) | 668, 789, 1059, 1401, 2115 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 3003, 3035 |
| BauI | CACGAG | 1 cut(s) | 1821 |
| BbsI | GAAGAC | 2 cut(s) | 227, 3540 |
| Bbv12I | GWGCWC | 2 cut(s) | 1233, 2541 |
| BbvCI | CCTCAGC | 3 cut(s) | 330, 559, 795 |
| BccI | CCATC | 8 cut(s) | 122, 313, 1157, 2180, 2309, 3251, 3965, 4040 |
| BceAI | ACGGC | 8 cut(s) | 21, 139, 841, 889, 2045, 2240, 2760, 3456 |
| BcgI | CGANNNNNNTGC | 4 cut(s) | 1043, 1077, 2729, 2763 |
| BciT130I | CCWGG | 4 cut(s) | 2090, 3226, 3319, 3700 |
| BciVI | GTATCC | 1 cut(s) | 3175 |
| BclI | TGATCA | 1 cut(s) | 2779 |
| BcnI | CCSGG | 1 cut(s) | 2489 |
| BcoDI | GTCTC | 4 cut(s) | 209, 1760, 2708, 3842 |
| BfaI | CTAG | 4 cut(s) | 1982, 2004, 2247, 2415 |
| BfmI | CTRYAG | 6 cut(s) | 423, 2991, 3026, 3134, 3408, 3882 |
| BfoI | RGCGCY | 1 cut(s) | 3926 |
| BfrI | CTTAAG | 1 cut(s) | 2797 |
| BfuAI | ACCTGC | 2 cut(s) | 3298, 3367 |
| BfuI | GTATCC | 1 cut(s) | 3175 |
| BglII | AGATCT | 1 cut(s) | 2142 |
| Bme1390I | CCNGG | 5 cut(s) | 2090, 2489, 3226, 3319, 3700 |
| Bme18I | GGWCC | 3 cut(s) | 418, 3272, 3912 |
| BmeT110I | CYCGRG | 1 cut(s) | 2148 |
| BmgT120I | GGNCC | 6 cut(s) | 418, 1517, 2523, 3272, 3691, 3912 |
| BmiI | GGNNCC | 4 cut(s) | 133, 420, 3285, 3914 |
| BmrFI | CCNGG | 5 cut(s) | 2090, 2489, 3226, 3319, 3700 |
| BpiI | GAAGAC | 2 cut(s) | 227, 3540 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1934, 1966 |
| BpmI | CTGGAG | 5 cut(s) | 3091, 3408, 3653, 3816, 3849 |
| Bpu10I | CCTNAGC | 4 cut(s) | 330, 559, 795, 3651 |
| BpuEI | CTTGAG | 4 cut(s) | 1957, 2189, 2579, 2907 |
| BpuMI | CCSGG | 1 cut(s) | 2489 |
| BsaBI | GATNNNNATC | 2 cut(s) | 21, 1410 |
| BsaHI | GRCGYC | 2 cut(s) | 162, 921 |
| BsaI | GGTCTC | 3 cut(s) | 209, 2708, 3842 |
| BsaWI | WCCGGW | 3 cut(s) | 2239, 3198, 3892 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 420, 450, 3847, 3877 |
| Bse118I | RCCGGY | 2 cut(s) | 2239, 3892 |
| Bse1I | ACTGG | 2 cut(s) | 1505, 3866 |
| Bse21I | CCTNAGG | 1 cut(s) | 1722 |
| Bse3DI | GCAATG | 5 cut(s) | 199, 638, 1146, 3666, 4063 |
| Bse8I | GATNNNNATC | 2 cut(s) | 21, 1410 |
| BseAI | TCCGGA | 1 cut(s) | 3198 |
| BseBI | CCWGG | 4 cut(s) | 2090, 3226, 3319, 3700 |
| BseGI | GGATG | 9 cut(s) | 455, 2497, 2656, 2815, 3262, 3957, 3999, 4011, 4032 |
| BseJI | GATNNNNATC | 2 cut(s) | 21, 1410 |
| BseMI | GCAATG | 5 cut(s) | 199, 638, 1146, 3666, 4063 |
| BseNI | ACTGG | 2 cut(s) | 1505, 3866 |
| BseRI | GAGGAG | 5 cut(s) | 260, 347, 428, 812, 3296 |
| BseSI | GKGCMC | 1 cut(s) | 1861 |
| Bsh1236I | CGCG | 1 cut(s) | 27 |
| BshTI | ACCGGT | 2 cut(s) | 2239, 3892 |
| BsiHKAI | GWGCWC | 2 cut(s) | 1233, 2541 |
| BsiHKCI | CYCGRG | 1 cut(s) | 2148 |
| BsiSI | CCGG | 5 cut(s) | 153, 2240, 2488, 3199, 3893 |
| BslFI | GGGAC | 2 cut(s) | 404, 3898 |
| BsmAI | GTCTC | 4 cut(s) | 209, 1760, 2708, 3842 |
| BsmFI | GGGAC | 2 cut(s) | 404, 3898 |
| Bso31I | GGTCTC | 3 cut(s) | 209, 2708, 3842 |
| BsoBI | CYCGRG | 1 cut(s) | 2148 |
| Bsp1286I | GDGCHC | 8 cut(s) | 668, 789, 1059, 1233, 1401, 1861, 2115, 2541 |
| Bsp13I | TCCGGA | 1 cut(s) | 3198 |
| Bsp1407I | TGTACA | 1 cut(s) | 3019 |
| Bsp19I | CCATGG | 1 cut(s) | 2703 |
| Bsp68I | TCGCGA | 1 cut(s) | 27 |
| BspEI | TCCGGA | 1 cut(s) | 3198 |
| BspFNI | CGCG | 1 cut(s) | 27 |
| BspHI | TCATGA | 3 cut(s) | 649, 1987, 2710 |
| BspLI | GGNNCC | 4 cut(s) | 133, 420, 3285, 3914 |
| BspMAI | CTGCAG | 3 cut(s) | 2995, 3138, 3412 |
| BspMI | ACCTGC | 2 cut(s) | 3298, 3367 |
| BspPI | GGATC | 7 cut(s) | 350, 491, 592, 597, 1450, 2871, 2889 |
| BspQI | GCTCTTC | 1 cut(s) | 375 |
| BspTI | CTTAAG | 1 cut(s) | 2797 |
| BspTNI | GGTCTC | 3 cut(s) | 209, 2708, 3842 |
| BsrBI | CCGCTC | 1 cut(s) | 3264 |
| BsrDI | GCAATG | 5 cut(s) | 199, 638, 1146, 3666, 4063 |
| BsrFI | RCCGGY | 2 cut(s) | 2239, 3892 |
| BsrGI | TGTACA | 1 cut(s) | 3019 |
| BsrI | ACTGG | 2 cut(s) | 1505, 3866 |
| BssAI | RCCGGY | 2 cut(s) | 2239, 3892 |
| BssNI | GRCGYC | 2 cut(s) | 162, 921 |
| BssSI | CACGAG | 1 cut(s) | 1821 |
| BssT1I | CCWWGG | 8 cut(s) | 51, 114, 678, 2703, 3252, 3945, 4001, 4036 |
| Bst2BI | CACGAG | 1 cut(s) | 1821 |
| Bst2UI | CCWGG | 4 cut(s) | 2090, 3226, 3319, 3700 |
| Bst4CI | ACNGT | 7 cut(s) | 1556, 1672, 2341, 3496, 3859, 3930, 4024 |
| Bst6I | CTCTTC | 8 cut(s) | 246, 375, 1377, 1593, 2565, 3555, 3573, 3726 |
| BstACI | GRCGYC | 2 cut(s) | 162, 921 |
| BstAFI | CTTAAG | 1 cut(s) | 2797 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1673 |
| BstAUI | TGTACA | 1 cut(s) | 3019 |
| BstC8I | GCNNGC | 3 cut(s) | 530, 534, 2454 |
| BstDSI | CCRYGG | 2 cut(s) | 606, 2703 |
| BstF5I | GGATG | 9 cut(s) | 455, 2497, 2656, 2815, 3262, 3957, 3999, 4011, 4032 |
| BstFNI | CGCG | 1 cut(s) | 27 |
| BstH2I | RGCGCY | 1 cut(s) | 3926 |
| BstHHI | GCGC | 2 cut(s) | 2911, 3925 |
| BstMAI | GTCTC | 4 cut(s) | 209, 1760, 2708, 3842 |
| BstNI | CCWGG | 4 cut(s) | 2090, 3226, 3319, 3700 |
| BstNSI | RCATGY | 2 cut(s) | 2264, 2456 |
| BstSCI | CCNGG | 5 cut(s) | 2088, 2487, 3224, 3317, 3698 |
| BstSFI | CTRYAG | 6 cut(s) | 423, 2991, 3026, 3134, 3408, 3882 |
| BstSLI | GKGCMC | 1 cut(s) | 1861 |
| BstUI | CGCG | 1 cut(s) | 27 |
| BstV2I | GAAGAC | 2 cut(s) | 227, 3540 |
| BstX2I | RGATCY | 3 cut(s) | 584, 2142, 2863 |
| BstYI | RGATCY | 3 cut(s) | 584, 2142, 2863 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1722 |
| BsuI | GTATCC | 1 cut(s) | 3175 |
| BtgI | CCRYGG | 2 cut(s) | 606, 2703 |
| BtgZI | GCGATG | 3 cut(s) | 8, 42, 141 |
| BtsCI | GGATG | 9 cut(s) | 455, 2497, 2656, 2815, 3262, 3957, 3999, 4011, 4032 |
| BtsI | GCAGTG | 2 cut(s) | 3345, 3417 |
| BtsIMutI | CAGTG | 7 cut(s) | 91, 499, 1519, 2307, 2337, 3345, 3417 |
| BtuMI | TCGCGA | 1 cut(s) | 27 |
| BveI | ACCTGC | 2 cut(s) | 3298, 3367 |
| Cac8I | GCNNGC | 3 cut(s) | 530, 534, 2454 |
| CaiI | CAGNNNCTG | 5 cut(s) | 365, 1769, 2273, 2327, 3500 |
| CciI | TCATGA | 3 cut(s) | 649, 1987, 2710 |
| CfoI | GCGC | 2 cut(s) | 2911, 3925 |
| Cfr10I | RCCGGY | 2 cut(s) | 2239, 3892 |
| Cfr13I | GGNCC | 6 cut(s) | 418, 1517, 2523, 3272, 3691, 3912 |
| CseI | GACGC | 3 cut(s) | 170, 2000, 2018 |
| Csp6I | GTAC | 5 cut(s) | 567, 1640, 3020, 3076, 3231 |
| CspAI | ACCGGT | 2 cut(s) | 2239, 3892 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 208, 243 |
| CviQI | GTAC | 5 cut(s) | 567, 1640, 3020, 3076, 3231 |
| DraI | TTTAAA | 1 cut(s) | 4078 |
| Eam1104I | CTCTTC | 8 cut(s) | 246, 375, 1377, 1593, 2565, 3555, 3573, 3726 |
| EarI | CTCTTC | 8 cut(s) | 246, 375, 1377, 1593, 2565, 3555, 3573, 3726 |
| EciI | GGCGGA | 1 cut(s) | 23 |
| Eco130I | CCWWGG | 8 cut(s) | 51, 114, 678, 2703, 3252, 3945, 4001, 4036 |
| Eco147I | AGGCCT | 1 cut(s) | 2389 |
| Eco24I | GRGCYC | 5 cut(s) | 668, 789, 1059, 1401, 2115 |
| Eco31I | GGTCTC | 3 cut(s) | 209, 2708, 3842 |
| Eco32I | GATATC | 2 cut(s) | 1123, 1210 |
| Eco47I | GGWCC | 3 cut(s) | 418, 3272, 3912 |
| Eco81I | CCTNAGG | 1 cut(s) | 1722 |
| Eco88I | CYCGRG | 1 cut(s) | 2148 |
| EcoO109I | RGGNCCY | 2 cut(s) | 418, 3912 |
| EcoRII | CCWGG | 4 cut(s) | 2088, 3224, 3317, 3698 |
| EcoRV | GATATC | 2 cut(s) | 1123, 1210 |
| EcoT14I | CCWWGG | 8 cut(s) | 51, 114, 678, 2703, 3252, 3945, 4001, 4036 |
| EcoT22I | ATGCAT | 1 cut(s) | 640 |
| EcoT38I | GRGCYC | 5 cut(s) | 668, 789, 1059, 1401, 2115 |
| ErhI | CCWWGG | 8 cut(s) | 51, 114, 678, 2703, 3252, 3945, 4001, 4036 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2883, 2915 |
| FaqI | GGGAC | 2 cut(s) | 404, 3898 |
| FauI | CCCGC | 1 cut(s) | 3750 |
| FauNDI | CATATG | 2 cut(s) | 2691, 3016 |
| FbaI | TGATCA | 1 cut(s) | 2779 |
| FokI | GGATG | 9 cut(s) | 442, 2504, 2663, 2822, 3269, 3944, 4006, 4018, 4019 |
| FriOI | GRGCYC | 5 cut(s) | 668, 789, 1059, 1401, 2115 |
| FspBI | CTAG | 4 cut(s) | 1982, 2004, 2247, 2415 |
| GlaI | GCGC | 2 cut(s) | 2910, 3924 |
| GsuI | CTGGAG | 5 cut(s) | 3091, 3408, 3653, 3816, 3849 |
| HaeII | RGCGCY | 1 cut(s) | 3926 |
| HapII | CCGG | 5 cut(s) | 153, 2240, 2488, 3199, 3893 |
| HgaI | GACGC | 3 cut(s) | 170, 2000, 2018 |
| HhaI | GCGC | 2 cut(s) | 2911, 3925 |
| Hin1I | GRCGYC | 2 cut(s) | 162, 921 |
| Hin6I | GCGC | 2 cut(s) | 2909, 3923 |
| HinP1I | GCGC | 2 cut(s) | 2909, 3923 |
| HincII | GTYRAC | 3 cut(s) | 339, 453, 2172 |
| HindII | GTYRAC | 3 cut(s) | 339, 453, 2172 |
| HindIII | AAGCTT | 1 cut(s) | 1660 |
| HpaII | CCGG | 5 cut(s) | 153, 2240, 2488, 3199, 3893 |
| HphI | GGTGA | 4 cut(s) | 26, 139, 860, 3907 |
| Hpy166II | GTNNAC | 7 cut(s) | 339, 453, 818, 1826, 2172, 3233, 3933 |
| Hpy8I | GTNNAC | 7 cut(s) | 339, 453, 818, 1826, 2172, 3233, 3933 |
| Hpy99I | CGWCG | 2 cut(s) | 125, 2610 |
| HpyCH4III | ACNGT | 7 cut(s) | 1556, 1672, 2341, 3496, 3859, 3930, 4024 |
| HpyCH4IV | ACGT | 3 cut(s) | 921, 1638, 3625 |
| HpySE526I | ACGT | 3 cut(s) | 921, 1638, 3625 |
| Hsp92I | GRCGYC | 2 cut(s) | 162, 921 |
| HspAI | GCGC | 2 cut(s) | 2909, 3923 |
| Kpn2I | TCCGGA | 1 cut(s) | 3198 |
| Ksp22I | TGATCA | 1 cut(s) | 2779 |
| LguI | GCTCTTC | 1 cut(s) | 375 |
| LmnI | GCTCC | 7 cut(s) | 137, 1228, 2536, 3127, 3283, 3424, 3835 |
| MaeI | CTAG | 4 cut(s) | 1982, 2004, 2247, 2415 |
| MaeII | ACGT | 3 cut(s) | 921, 1638, 3625 |
| MbiI | CCGCTC | 1 cut(s) | 3264 |
| MfeI | CAATTG | 2 cut(s) | 1689, 3375 |
| MflI | RGATCY | 3 cut(s) | 584, 2142, 2863 |
| MhlI | GDGCHC | 8 cut(s) | 668, 789, 1059, 1233, 1401, 1861, 2115, 2541 |
| MlsI | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| MluNI | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| MlyI | GAGTC | 9 cut(s) | 188, 344, 391, 452, 512, 683, 1367, 2303, 2333 |
| MmeI | TCCRAC | 2 cut(s) | 222, 1476 |
| Mox20I | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| Mph1103I | ATGCAT | 1 cut(s) | 640 |
| MroI | TCCGGA | 1 cut(s) | 3198 |
| MscI | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| MslI | CAYNNNNRTG | 2 cut(s) | 27, 1377 |
| Msp20I | TGGCCA | 7 cut(s) | 741, 1011, 1098, 1185, 1272, 3569, 4031 |
| MspA1I | CMGCKG | 6 cut(s) | 572, 707, 1871, 2183, 2764, 3605 |
| MspCI | CTTAAG | 1 cut(s) | 2797 |
| MspI | CCGG | 5 cut(s) | 153, 2240, 2488, 3199, 3893 |
| MspR9I | CCNGG | 5 cut(s) | 2090, 2489, 3226, 3319, 3700 |
| MunI | CAATTG | 2 cut(s) | 1689, 3375 |
| MvaI | CCWGG | 4 cut(s) | 2090, 3226, 3319, 3700 |
| MvnI | CGCG | 1 cut(s) | 27 |
| NciI | CCSGG | 1 cut(s) | 2489 |
| NcoI | CCATGG | 1 cut(s) | 2703 |
| NdeI | CATATG | 2 cut(s) | 2691, 3016 |
| NlaIV | GGNNCC | 4 cut(s) | 133, 420, 3285, 3914 |
| NmeAIII | GCCGAG | 3 cut(s) | 436, 1833, 1966 |
| NmuCI | GTSAC | 7 cut(s) | 145, 158, 389, 2006, 2750, 2917, 3895 |
| NruI | TCGCGA | 1 cut(s) | 27 |
| NsiI | ATGCAT | 1 cut(s) | 640 |
| NspI | RCATGY | 2 cut(s) | 2264, 2456 |
| PacI | TTAATTAA | 1 cut(s) | 2406 |
| PaeI | GCATGC | 1 cut(s) | 2456 |
| PaeR7I | CTCGAG | 1 cut(s) | 2148 |
| PagI | TCATGA | 3 cut(s) | 649, 1987, 2710 |
| PaqCI | CACCTGC | 1 cut(s) | 3298 |
| PceI | AGGCCT | 1 cut(s) | 2389 |
| PciSI | GCTCTTC | 1 cut(s) | 375 |
| PflMI | CCANNNNNTGG | 8 cut(s) | 748, 835, 883, 931, 1018, 1105, 1192, 1279 |
| PinAI | ACCGGT | 2 cut(s) | 2239, 3892 |
| PleI | GAGTC | 9 cut(s) | 187, 343, 390, 451, 511, 682, 1366, 2302, 2332 |
| PpsI | GAGTC | 9 cut(s) | 187, 343, 390, 451, 511, 682, 1366, 2302, 2332 |
| PpuMI | RGGWCCY | 2 cut(s) | 418, 3912 |
| PshBI | ATTAAT | 5 cut(s) | 804, 987, 1074, 1248, 3813 |
| Psp5II | RGGWCCY | 2 cut(s) | 418, 3912 |
| Psp6I | CCWGG | 4 cut(s) | 2088, 3224, 3317, 3698 |
| PspGI | CCWGG | 4 cut(s) | 2088, 3224, 3317, 3698 |
| PspN4I | GGNNCC | 4 cut(s) | 133, 420, 3285, 3914 |
| PspPI | GGNCC | 6 cut(s) | 418, 1517, 2523, 3272, 3691, 3912 |
| PspPPI | RGGWCCY | 2 cut(s) | 418, 3912 |
| PstI | CTGCAG | 3 cut(s) | 2995, 3138, 3412 |
| PstNI | CAGNNNCTG | 5 cut(s) | 365, 1769, 2273, 2327, 3500 |
| PsuI | RGATCY | 3 cut(s) | 584, 2142, 2863 |
| PvuII | CAGCTG | 6 cut(s) | 572, 707, 1871, 2183, 2764, 3605 |
| RruI | TCGCGA | 1 cut(s) | 27 |
| RsaI | GTAC | 5 cut(s) | 568, 1641, 3021, 3077, 3232 |
| RsaNI | GTAC | 5 cut(s) | 567, 1640, 3020, 3076, 3231 |
| RseI | CAYNNNNRTG | 2 cut(s) | 27, 1377 |
| SapI | GCTCTTC | 1 cut(s) | 375 |
| Sau96I | GGNCC | 6 cut(s) | 418, 1517, 2523, 3272, 3691, 3912 |
| SchI | GAGTC | 9 cut(s) | 188, 344, 391, 452, 512, 683, 1367, 2303, 2333 |
| ScrFI | CCNGG | 5 cut(s) | 2090, 2489, 3226, 3319, 3700 |
| SduI | GDGCHC | 8 cut(s) | 668, 789, 1059, 1233, 1401, 1861, 2115, 2541 |
| SfcI | CTRYAG | 6 cut(s) | 423, 2991, 3026, 3134, 3408, 3882 |
| Sfr274I | CTCGAG | 1 cut(s) | 2148 |
| SinI | GGWCC | 3 cut(s) | 418, 3272, 3912 |
| SlaI | CTCGAG | 1 cut(s) | 2148 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 27, 1377 |
| SmlI | CTYRAG | 7 cut(s) | 1972, 2148, 2204, 2594, 2797, 2922, 4088 |
| SmoI | CTYRAG | 7 cut(s) | 1972, 2148, 2204, 2594, 2797, 2922, 4088 |
| SphI | GCATGC | 1 cut(s) | 2456 |
| SseBI | AGGCCT | 1 cut(s) | 2389 |
| SspI | AATATT | 3 cut(s) | 718, 1104, 1191 |
| SspMI | CTAG | 4 cut(s) | 1982, 2004, 2247, 2415 |
| StuI | AGGCCT | 1 cut(s) | 2389 |
| StyD4I | CCNGG | 5 cut(s) | 2088, 2487, 3224, 3317, 3698 |
| StyI | CCWWGG | 8 cut(s) | 51, 114, 678, 2703, 3252, 3945, 4001, 4036 |
| TaaI | ACNGT | 7 cut(s) | 1556, 1672, 2341, 3496, 3859, 3930, 4024 |
| TaiI | ACGT | 3 cut(s) | 924, 1641, 3628 |
| TaqI | TCGA | 2 cut(s) | 2149, 3870 |
| TatI | WGTACW | 3 cut(s) | 566, 3019, 3230 |
| TauI | GCSGC | 4 cut(s) | 167, 170, 3264, 4065 |
| TscAI | CASTG | 7 cut(s) | 91, 499, 1519, 2314, 2344, 3345, 3417 |
| TseFI | GTSAC | 7 cut(s) | 145, 158, 389, 2006, 2750, 2917, 3895 |
| Tsp45I | GTSAC | 7 cut(s) | 145, 158, 389, 2006, 2750, 2917, 3895 |
| TspGWI | ACGGA | 2 cut(s) | 595, 1455 |
| TspRI | CASTG | 7 cut(s) | 91, 499, 1519, 2314, 2344, 3345, 3417 |
| Van91I | CCANNNNNTGG | 8 cut(s) | 748, 835, 883, 931, 1018, 1105, 1192, 1279 |
| Vha464I | CTTAAG | 1 cut(s) | 2797 |
| VpaK11BI | GGWCC | 3 cut(s) | 418, 3272, 3912 |
| VspI | ATTAAT | 5 cut(s) | 804, 987, 1074, 1248, 3813 |
| XapI | RAATTY | 2 cut(s) | 1885, 1918 |
| XceI | RCATGY | 2 cut(s) | 2264, 2456 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 3325 |
| XhoI | CTCGAG | 1 cut(s) | 2148 |
| XspI | CTAG | 4 cut(s) | 1982, 2004, 2247, 2415 |
| ZraI | GACGTC | 1 cut(s) | 922 |
| Zsp2I | ATGCAT | 1 cut(s) | 640 |