Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0011952

Physical Location & Seq

Genomic Coordinates Reverse (-)

4163933 .. 4164568

Gene Structure 636 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G036800.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 636 bp

ATGGAGAAAGGCGAGGGCTCAGCGGCCGAGCAAGACGCGGAGGAGACCACCCAGCACCACCTCAGGATTCCCGCCGGGTTGACTCAGGACGAGTTCGACGACTTGAAGCGGATCGTGGCCGAGTTCCACAAGTACCCGGTGGGTCCCGGAAAATGCTCTTCCCTACTCGCGCAGCGCGTGTACGCTCCGCCCGACAAGGTGTGGTCGGTGGTGCGCCGCTTCGACAAGCCCCAGACCTACAAGCACTTCATCCGGAGCTGTACGGTCAAGGAGGGGTTTAAAATGACCGTCGGGTGCACGAGGGACGTCAATGTCATCTCCGGGCTACCGGCGGCCACCAGCACGGAGCGGCTCGACTTTCTCGATGACGACCGCCACGTCACCGGTTTCAGTATTACCGGCGGCGAGCACCGGCTCAAGAATTACCGGTCGGTGACGACCGTGCATGGGTTCGAGCGCGACGGGAGGATCTGGACTGTCGTTTTGGAATCGTACGTTGTCGATGTGCCCGAGGGGAATTCCGAGGAGGACACGCGTCTCTTCGCGGATACAGTTGTCAAGTTGAATCTCCAGAAGCTGGCGTCGGTCACCGAAGGGCTGGCGGGTGACGGTGACGCTAAACCGCAGGTGATGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0008289 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009892 GO:0009987 GO:0010033 GO:0010427 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019840 GO:0019888 GO:0023052 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031406 GO:0032268 GO:0032269 GO:0032515 GO:0032870 GO:0033293 GO:0033993 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0036094 GO:0038023 GO:0042221 GO:0042562 GO:0042802 GO:0042803 GO:0043086 GO:0043167 GO:0043168 GO:0043177 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0046983 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0080163 GO:0097305 GO:0097306 GO:0098772 GO:1901700 GO:1901701 GO:1905183

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Polyketide_cyc2

Protein Analysis

212

Amino Acids

23.51

Weight (kDa)

5.66

Isoelectric Point (pI)

35.03

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0011952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17870 AT5G46790 AT5G46790
fragaria_vesca	FvH4_5g22060
malus_domestica	MD06G1034000.v1.1 MD16G1274400.v1.1
prunus_persica	Prupe.5G036800_v2.0.a1
pyrus_communis	pycom06g02810 pycom16g24460
rosa_chinensis	RchiOBHm_Chr7g0209681
rosa_laevigata	RLG00000003104
rosa_multiflora	Rmu_sc0002616.1_g000004
rosa_roxburghii	Rroxscaffold_3G00249150
rosa_rugosa	Rorug07G0115400
rosa_samantha	Rh7AG249100 Rh7BG243000 Rh7CG265000 Rh7DG254900
rosa_wichuraiana	Rw7G021120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	616
AasI	GACNNNNNNGTC	2 cut(s)	311, 377
AatII	GACGTC	1 cut(s)	309
Acc36I	ACCTGC	1 cut(s)	616
AccB7I	CCANNNNNTGG	1 cut(s)	577
AccBSI	CCGCTC	1 cut(s)	349
AccII	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
AccIII	TCCGGA	1 cut(s)	252
AclWI	GGATC	2 cut(s)	119, 476
AcoI	YGGCCR	3 cut(s)	24, 117, 333
AcsI	RAATTY	1 cut(s)	517
AcyI	GRCGYC	2 cut(s)	306, 581
AfaI	GTAC	4 cut(s)	134, 182, 262, 494
AfiI	CCNNNNNNNGG	2 cut(s)	447, 577
AflIII	ACRYGT	1 cut(s)	533
AgeI	ACCGGT	2 cut(s)	383, 426
AgsI	TTSAA	2 cut(s)	106, 565
AjiI	CACGTC	1 cut(s)	379
AluBI	AGCT	2 cut(s)	258, 577
AluI	AGCT	2 cut(s)	258, 577
Alw21I	GWGCWC	2 cut(s)	299, 411
Alw26I	GTCTC	2 cut(s)	38, 542
Alw44I	GTGCAC	1 cut(s)	295
AlwI	GGATC	2 cut(s)	119, 476
AlwNI	CAGNNNCTG	1 cut(s)	577
Ama87I	CYCGRG	1 cut(s)	509
Aor13HI	TCCGGA	1 cut(s)	252
AoxI	GGCC	3 cut(s)	24, 117, 333
ApaLI	GTGCAC	1 cut(s)	295
ApeKI	GCWGC	1 cut(s)	172
ApoI	RAATTY	1 cut(s)	517
ArsI	GACNNNNNNTTYG	2 cut(s)	466, 498
AsiGI	ACCGGT	2 cut(s)	383, 426
AspLEI	GCGC	4 cut(s)	172, 177, 216, 459
AspS9I	GGNCC	1 cut(s)	143
AsuC2I	CCSGG	4 cut(s)	76, 137, 147, 322
AsuHPI	GGTGA	5 cut(s)	373, 445, 580, 617, 623
AvaI	CYCGRG	1 cut(s)	509
AvaII	GGWCC	1 cut(s)	143
AxyI	CCTNAGG	1 cut(s)	62
BaeGI	GKGCMC	2 cut(s)	299, 510
BaeI	ACNNNNGTAYC	2 cut(s)	540, 573
BanII	GRGCYC	1 cut(s)	20
BauI	CACGAG	1 cut(s)	298
Bbv12I	GWGCWC	2 cut(s)	299, 411
BbvI	GCAGC	1 cut(s)	184
BciVI	GTATCC	1 cut(s)	541
BcnI	CCSGG	4 cut(s)	76, 137, 147, 322
BcoDI	GTCTC	2 cut(s)	38, 542
BfuAI	ACCTGC	1 cut(s)	616
BfuI	GTATCC	1 cut(s)	541
BisI	GCNGC	6 cut(s)	24, 173, 217, 333, 350, 403
BlpI	GCTNAGC	1 cut(s)	19
BlsI	GCNGC	6 cut(s)	25, 174, 218, 334, 351, 404
Bme1390I	CCNGG	4 cut(s)	76, 137, 147, 322
Bme18I	GGWCC	1 cut(s)	143
BmeT110I	CYCGRG	1 cut(s)	509
BmgBI	CACGTC	1 cut(s)	379
BmgT120I	GGNCC	1 cut(s)	143
BmiI	GGNNCC	2 cut(s)	144, 145
BmrFI	CCNGG	4 cut(s)	76, 137, 147, 322
BoxI	GACNNNNGTC	1 cut(s)	534
BpmI	CTGGAG	1 cut(s)	554
Bpu1102I	GCTNAGC	1 cut(s)	19
BpuEI	CTTGAG	1 cut(s)	401
BpuMI	CCSGG	4 cut(s)	76, 137, 147, 322
BsaHI	GRCGYC	2 cut(s)	306, 581
BsaI	GGTCTC	1 cut(s)	38
BsaJI	CCNNGG	2 cut(s)	510, 522
BsaWI	WCCGGW	3 cut(s)	252, 383, 426
Bsc4I	CCNNNNNNNGG	2 cut(s)	447, 577
Bse118I	RCCGGY	5 cut(s)	328, 383, 398, 411, 426
Bse21I	CCTNAGG	1 cut(s)	62
BseAI	TCCGGA	1 cut(s)	252
BseDI	CCNNGG	2 cut(s)	510, 522
BseGI	GGATG	1 cut(s)	249
BseLI	CCNNNNNNNGG	2 cut(s)	447, 577
BseMII	CTCAG	3 cut(s)	33, 76, 98
BseRI	GAGGAG	2 cut(s)	56, 539
BseSI	GKGCMC	2 cut(s)	299, 510
BseX3I	CGGCCG	1 cut(s)	24
BseXI	GCAGC	1 cut(s)	184
BseYI	CCCAGC	1 cut(s)	51
Bsh1236I	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
Bsh1285I	CGRYCG	4 cut(s)	27, 373, 431, 441
BshFI	GGCC	3 cut(s)	26, 119, 335
BshTI	ACCGGT	2 cut(s)	383, 426
BsiEI	CGRYCG	4 cut(s)	27, 373, 431, 441
BsiHKAI	GWGCWC	2 cut(s)	299, 411
BsiHKCI	CYCGRG	1 cut(s)	509
BsiWI	CGTACG	1 cut(s)	492
BslFI	GGGAC	2 cut(s)	129, 317
BslI	CCNNNNNNNGG	2 cut(s)	447, 577
BsmAI	GTCTC	2 cut(s)	38, 542
BsmBI	CGTCTC	1 cut(s)	542
BsmFI	GGGAC	2 cut(s)	129, 317
BsnI	GGCC	3 cut(s)	26, 119, 335
Bso31I	GGTCTC	1 cut(s)	38
BsoBI	CYCGRG	1 cut(s)	509
Bsp1286I	GDGCHC	4 cut(s)	20, 299, 411, 510
Bsp13I	TCCGGA	1 cut(s)	252
Bsp143I	GATC	2 cut(s)	111, 468
Bsp1720I	GCTNAGC	1 cut(s)	19
BspANI	GGCC	3 cut(s)	26, 119, 335
BspCNI	CTCAG	3 cut(s)	32, 75, 97
BspEI	TCCGGA	1 cut(s)	252
BspFNI	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
BspLI	GGNNCC	2 cut(s)	144, 145
BspMI	ACCTGC	1 cut(s)	616
BspPI	GGATC	2 cut(s)	119, 476
BspQI	GCTCTTC	1 cut(s)	163
BspTNI	GGTCTC	1 cut(s)	38
BsrBI	CCGCTC	1 cut(s)	349
BsrFI	RCCGGY	5 cut(s)	328, 383, 398, 411, 426
BssAI	RCCGGY	5 cut(s)	328, 383, 398, 411, 426
BssECI	CCNNGG	2 cut(s)	510, 522
BssMI	GATC	2 cut(s)	111, 468
BssNI	GRCGYC	2 cut(s)	306, 581
BssSI	CACGAG	1 cut(s)	298
Bst2BI	CACGAG	1 cut(s)	298
Bst4CI	ACNGT	6 cut(s)	265, 289, 442, 478, 553, 611
Bst6I	CTCTTC	2 cut(s)	163, 545
BstACI	GRCGYC	2 cut(s)	306, 581
BstC8I	GCNNGC	3 cut(s)	407, 579, 600
BstDEI	CTNAG	3 cut(s)	19, 62, 84
BstEII	GGTNACC	1 cut(s)	586
BstF5I	GGATG	1 cut(s)	249
BstFNI	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
BstHHI	GCGC	4 cut(s)	172, 177, 216, 459
BstKTI	GATC	2 cut(s)	114, 471
BstMAI	GTCTC	2 cut(s)	38, 542
BstMBI	GATC	2 cut(s)	111, 468
BstMCI	CGRYCG	4 cut(s)	27, 373, 431, 441
BstPAI	GACNNNNGTC	1 cut(s)	534
BstPI	GGTNACC	1 cut(s)	586
BstSCI	CCNGG	4 cut(s)	74, 135, 145, 320
BstSLI	GKGCMC	2 cut(s)	299, 510
BstUI	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
BstV1I	GCAGC	1 cut(s)	184
BstX2I	RGATCY	1 cut(s)	468
BstYI	RGATCY	1 cut(s)	468
BstZI	CGGCCG	1 cut(s)	24
Bsu36I	CCTNAGG	1 cut(s)	62
BsuI	GTATCC	1 cut(s)	541
BsuRI	GGCC	3 cut(s)	26, 119, 335
BtrI	CACGTC	1 cut(s)	379
BtsCI	GGATG	1 cut(s)	249
BveI	ACCTGC	1 cut(s)	616
Cac8I	GCNNGC	3 cut(s)	407, 579, 600
CaiI	CAGNNNCTG	1 cut(s)	577
CfoI	GCGC	4 cut(s)	172, 177, 216, 459
Cfr10I	RCCGGY	5 cut(s)	328, 383, 398, 411, 426
Cfr13I	GGNCC	1 cut(s)	143
CseI	GACGC	4 cut(s)	44, 524, 570, 623
Csp6I	GTAC	4 cut(s)	133, 181, 261, 493
CspAI	ACCGGT	2 cut(s)	383, 426
CviAII	CATG	1 cut(s)	446
CviQI	GTAC	4 cut(s)	133, 181, 261, 493
DdeI	CTNAG	3 cut(s)	19, 62, 84
DpnI	GATC	2 cut(s)	113, 470
DpnII	GATC	2 cut(s)	111, 468
DraI	TTTAAA	1 cut(s)	280
DrdI	GACNNNNNNGTC	2 cut(s)	311, 377
DseDI	GACNNNNNNGTC	2 cut(s)	311, 377
EaeI	YGGCCR	3 cut(s)	24, 117, 333
EagI	CGGCCG	1 cut(s)	24
Eam1104I	CTCTTC	2 cut(s)	163, 545
EarI	CTCTTC	2 cut(s)	163, 545
EciI	GGCGGA	1 cut(s)	177
EclXI	CGGCCG	1 cut(s)	24
Eco24I	GRGCYC	1 cut(s)	20
Eco31I	GGTCTC	1 cut(s)	38
Eco47I	GGWCC	1 cut(s)	143
Eco52I	CGGCCG	1 cut(s)	24
Eco81I	CCTNAGG	1 cut(s)	62
Eco88I	CYCGRG	1 cut(s)	509
Eco91I	GGTNACC	1 cut(s)	586
EcoO109I	RGGNCCY	1 cut(s)	143
EcoO65I	GGTNACC	1 cut(s)	586
EcoRI	GAATTC	1 cut(s)	517
EcoT38I	GRGCYC	1 cut(s)	20
Esp3I	CGTCTC	1 cut(s)	542
FaeI	CATG	1 cut(s)	449
FaiI	YATR	1 cut(s)	447
FaqI	GGGAC	2 cut(s)	129, 317
FatI	CATG	1 cut(s)	445
FauI	CCCGC	2 cut(s)	79, 595
Fnu4HI	GCNGC	6 cut(s)	24, 173, 217, 333, 350, 403
FokI	GGATG	1 cut(s)	236
FriOI	GRGCYC	1 cut(s)	20
Fsp4HI	GCNGC	6 cut(s)	24, 173, 217, 333, 350, 403
GlaI	GCGC	4 cut(s)	171, 176, 215, 458
GluI	GCNGC	6 cut(s)	24, 173, 217, 333, 350, 403
GsaI	CCCAGC	1 cut(s)	55
GsuI	CTGGAG	1 cut(s)	554
HaeIII	GGCC	3 cut(s)	26, 119, 335
HgaI	GACGC	4 cut(s)	44, 524, 570, 623
HhaI	GCGC	4 cut(s)	172, 177, 216, 459
Hin1I	GRCGYC	2 cut(s)	306, 581
Hin1II	CATG	1 cut(s)	449
Hin6I	GCGC	4 cut(s)	170, 175, 214, 457
HinP1I	GCGC	4 cut(s)	170, 175, 214, 457
HincII	GTYRAC	1 cut(s)	81
HindII	GTYRAC	1 cut(s)	81
HinfI	GANTC	4 cut(s)	67, 82, 488, 565
HphI	GGTGA	5 cut(s)	373, 445, 580, 617, 623
Hpy166II	GTNNAC	3 cut(s)	81, 181, 297
Hpy188I	TCNGA	1 cut(s)	523
Hpy188III	TCNNGA	7 cut(s)	64, 86, 253, 362, 418, 472, 571
Hpy8I	GTNNAC	3 cut(s)	81, 181, 297
Hpy99I	CGWCG	4 cut(s)	101, 293, 464, 586
HpyAV	CCTTC	1 cut(s)	587
HpyCH4III	ACNGT	6 cut(s)	265, 289, 442, 478, 553, 611
HpyCH4IV	ACGT	3 cut(s)	306, 378, 495
HpyCH4V	TGCA	2 cut(s)	297, 445
HpyF3I	CTNAG	3 cut(s)	19, 62, 84
HpySE526I	ACGT	3 cut(s)	306, 378, 495
Hsp92I	GRCGYC	2 cut(s)	306, 581
Hsp92II	CATG	1 cut(s)	449
HspAI	GCGC	4 cut(s)	170, 175, 214, 457
KflI	GGGWCCC	1 cut(s)	143
Kpn2I	TCCGGA	1 cut(s)	252
Kzo9I	GATC	2 cut(s)	111, 468
LguI	GCTCTTC	1 cut(s)	163
LmnI	GCTCC	3 cut(s)	190, 255, 346
Lsp1109I	GCAGC	1 cut(s)	184
MaeII	ACGT	3 cut(s)	306, 378, 495
MaeIII	GTNAC	5 cut(s)	379, 433, 586, 605, 611
MalI	GATC	2 cut(s)	113, 470
MbiI	CCGCTC	1 cut(s)	349
MboI	GATC	2 cut(s)	111, 468
MboII	GAAGA	2 cut(s)	150, 532
MflI	RGATCY	1 cut(s)	468
MhlI	GDGCHC	4 cut(s)	20, 299, 411, 510
MluCI	AATT	2 cut(s)	421, 517
MluI	ACGCGT	1 cut(s)	533
MlyI	GAGTC	1 cut(s)	76
MnlI	CCTC	9 cut(s)	7, 34, 71, 265, 294, 459, 505, 517, 520
MroI	TCCGGA	1 cut(s)	252
MseI	TTAA	1 cut(s)	279
MspA1I	CMGCKG	1 cut(s)	23
MspR9I	CCNGG	4 cut(s)	76, 137, 147, 322
MteI	GCGCNGCGC	1 cut(s)	173
MvnI	CGCG	6 cut(s)	38, 170, 177, 459, 535, 545
NciI	CCSGG	4 cut(s)	76, 137, 147, 322
NdeII	GATC	2 cut(s)	111, 468
NlaIII	CATG	1 cut(s)	449
NlaIV	GGNNCC	2 cut(s)	144, 145
NmeAIII	GCCGAG	2 cut(s)	52, 145
NmuCI	GTSAC	5 cut(s)	379, 433, 586, 605, 611
PaqCI	CACCTGC	1 cut(s)	616
PciSI	GCTCTTC	1 cut(s)	163
PcsI	WCGNNNNNNNCGW	6 cut(s)	96, 174, 189, 360, 375, 507
PfeI	GAWTC	3 cut(s)	67, 488, 565
Pfl23II	CGTACG	1 cut(s)	492
PflMI	CCANNNNNTGG	1 cut(s)	577
PfoI	TCCNGGA	1 cut(s)	145
PinAI	ACCGGT	2 cut(s)	383, 426
PkrI	GCNGC	6 cut(s)	25, 174, 218, 334, 351, 404
PleI	GAGTC	1 cut(s)	76
PpsI	GAGTC	1 cut(s)	76
PpuMI	RGGWCCY	1 cut(s)	143
PshAI	GACNNNNGTC	1 cut(s)	534
Psp5II	RGGWCCY	1 cut(s)	143
PspEI	GGTNACC	1 cut(s)	586
PspFI	CCCAGC	1 cut(s)	51
PspLI	CGTACG	1 cut(s)	492
PspN4I	GGNNCC	2 cut(s)	144, 145
PspPI	GGNCC	1 cut(s)	143
PspPPI	RGGWCCY	1 cut(s)	143
PstNI	CAGNNNCTG	1 cut(s)	577
PsuI	RGATCY	1 cut(s)	468
RsaI	GTAC	4 cut(s)	134, 182, 262, 494
RsaNI	GTAC	4 cut(s)	133, 181, 261, 493
SapI	GCTCTTC	1 cut(s)	163
SaqAI	TTAA	1 cut(s)	279
SatI	GCNGC	6 cut(s)	24, 173, 217, 333, 350, 403
Sau3AI	GATC	2 cut(s)	111, 468
Sau96I	GGNCC	1 cut(s)	143
SchI	GAGTC	1 cut(s)	76
ScrFI	CCNGG	4 cut(s)	76, 137, 147, 322
SduI	GDGCHC	4 cut(s)	20, 299, 411, 510
SetI	ASST	9 cut(s)	63, 201, 239, 260, 309, 381, 498, 579, 630
SinI	GGWCC	1 cut(s)	143
SmlI	CTYRAG	1 cut(s)	416
SmoI	CTYRAG	1 cut(s)	416
Sse9I	AATT	2 cut(s)	421, 517
StyD4I	CCNGG	4 cut(s)	74, 135, 145, 320
TaaI	ACNGT	6 cut(s)	265, 289, 442, 478, 553, 611
TaiI	ACGT	3 cut(s)	309, 381, 498
TaqI	TCGA	6 cut(s)	96, 222, 354, 363, 453, 501
TaqII	GACCGA	1 cut(s)	574
TasI	AATT	2 cut(s)	421, 517
TauI	GCSGC	5 cut(s)	26, 219, 335, 352, 405
TfiI	GAWTC	3 cut(s)	67, 488, 565
Tru1I	TTAA	1 cut(s)	279
Tru9I	TTAA	1 cut(s)	279
TseFI	GTSAC	5 cut(s)	379, 433, 586, 605, 611
TseI	GCWGC	1 cut(s)	172
Tsp45I	GTSAC	5 cut(s)	379, 433, 586, 605, 611
TspDTI	ATGAA	1 cut(s)	238
TspGWI	ACGGA	1 cut(s)	359
Van91I	CCANNNNNTGG	1 cut(s)	577
VneI	GTGCAC	1 cut(s)	295
VpaK11BI	GGWCC	1 cut(s)	143
XapI	RAATTY	1 cut(s)	517
ZraI	GACGTC	1 cut(s)	307

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.