Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000007

Orthogroup ID

OG0011952

Physical Location & Seq

Genomic Coordinates Reverse (-)

9006914 .. 9008830

Gene Structure 1917 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug07G0115400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1917 bp

ATGGACCCTTTTCCCGGCAAACCGCAGCTCCTCCGCCTCCTCACCTTCCTCTCCCTCCTCCTCCTCATCCACGGCGGTAGGCTCAACCTCGACCCTTCAGACCTTCAAGCCCTCATCACTGTCCAAACCCACCTCAGCTTCCACACCCCAGACAGAGCCAAACCCACCAACCCATGCAACACTCCCGGCGTCTTCTGCGAGAGAAGACTCTCCAACAACACCTACGTCCTCAAAATCACTAGACTCGTCTTCAAGTCCCAACTCCTCTCCGGCTCTCTGTCTCCGGCAATCGGACAGCTCTCCGAGCTTAAAGAGCTCTCTCTTCCCGACAACAGCCTCGTTGACCGAGTCCCACCCGAAATCGTTGACTGCAAGAAGCTGGAGATCCTCAACCTCGGAAACAACCAGTTTTCGGGTGAAGTTCCTTCTCAGCTCTCTTCTCTAATCAGGCTTCGAATACTCGACCTTTCCTCCAACAAGTTCTCCGGCAACTTGAGCTTCTTGAAGCATTTTCCCAACTTGGAAAATCTCTCCATTGCCGACAATCTCTTCTCCGGGAAGATCCCAGCTTCGGTTCGTTCTTTTCGCAATCTCAGGTTCTTCAACTTCGCCGGAAATGAGTTCCTGGAAGGCTCCGCACCTAAGTTGAAAAGGGTCGACGTTTCAGCTTCTTCCGAGGTTCCAAGGCGTTTCATTTTTGCTGAAACATCAATCTCCACCACCGCAGCAAAAACCAATAATAGTAATTCAATCGCTCAAGCACCCTCTAACGCTCCAGCTCCAGGTCCATCTGCAGCACCGAAGAAGAAGAAGAGGAGCAAGAAGAAGAAACTCGGAGGCTGGCTGCTCGGGTTTTTCTCCGGAGCGCTGGCCGGGAGCATATCCGGGTTCATCTTCTCTCTGCTGTTCAAGCTGCTCTTGGCTGTGGTTAGAGGAGGTGGAGGCAAGGACTCTGGTCCGGCCATTTTCAGTTCTCTGATTAAGAGAAAAGAGGACTTGGCTTTTCTGGAGAAAGAAGACGGGCTTACTTCGTTGGAGCTCATCGGAAGTGGAGGATGTGGACAGGTTTACAAAGCTGAGTTGCCAGGAAGCAACGGGAAGATAATCGCTATTAAGAAGATTATTCAACCTCCTAAGGAAGCGGCAGAGCTGACGGACGAAGACAGCAAGCAGATGAATAAGAAGATGCGTCAAATTCGGGCGGAGATCAATACCGTGGGACAAATTCGACACCGGAATCTGCTTCCTCTGTTGGCACATGTGTCCCGGCCGGACTGTCATCTGCTGGTGTATGAGTACATGAAAAATGGGAGCTTACAAGACATGTTGACTGAGGTTTCTGAAGGGAGAAGGGAATTGGATTGGTTAACAAGGCACAGAATTGCAATAGGAATCGCTTCAGGGCTTGAATATCTCCATGTCCACCATACACCTCACATCATTCACAGGGATCTGAAGCCGGCAAACGTCCTGCTTGATGACGATATGGAAGCTCGAATTGCAGATTTTGGGCTTGCTAAAGCAATGCCTGACTACCACACGCATATGACGTCTTCAAATGTGGCAGGAACGGTTGGTTTCATTGCACCGGAGTATCATCAGACATTCAAGTTCACAGAGAAGTGTGATATTTACAGCTTCGGGGTGTTGCTCGGGGTACTGATCATGGGAAAGCTACCGTCTGATGTATTTTTCCAGACCACCAACGAGATGAGTCTGGTTAAGTGGATGAAGAATGTGCTGACGTCGGAGGATCCTAAGCAGGCAATCGACTCAAAATTGATGGGAAATGGATTTGAGGACCAAATGCTCTTGGTTCTAAAGATAGCATGCTTTTGCACAGTGGATAACCCGAAAGAGAGACCTAGTAGTAAGGATGTTAGGTGCATGTTGGATCAAATCAAGCATCAAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001101 GO:0003674 GO:0004857 GO:0004864 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0007154 GO:0007165 GO:0008150 GO:0008289 GO:0009719 GO:0009725 GO:0009737 GO:0009738 GO:0009755 GO:0009892 GO:0009987 GO:0010033 GO:0010427 GO:0010563 GO:0010605 GO:0010921 GO:0010923 GO:0019208 GO:0019212 GO:0019220 GO:0019222 GO:0019840 GO:0019888 GO:0023052 GO:0030234 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031406 GO:0032268 GO:0032269 GO:0032515 GO:0032870 GO:0033293 GO:0033993 GO:0035303 GO:0035304 GO:0035305 GO:0035308 GO:0036094 GO:0038023 GO:0042221 GO:0042562 GO:0042802 GO:0042803 GO:0043086 GO:0043167 GO:0043168 GO:0043177 GO:0043178 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043666 GO:0044092 GO:0044424 GO:0044444 GO:0044464 GO:0045936 GO:0046983 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051346 GO:0051716 GO:0060089 GO:0060255 GO:0065007 GO:0065009 GO:0070887 GO:0071215 GO:0071229 GO:0071310 GO:0071396 GO:0071495 GO:0080090 GO:0080163 GO:0097305 GO:0097306 GO:0098772 GO:1901700 GO:1901701 GO:1905183

KEGG Pathways

Metabolic & Signaling

ko04016 ko04075 map04016 map04075

Pfam Domains

Protein Families

Polyketide_cyc2

Protein Analysis

638

Amino Acids

70.51

Weight (kDa)

9.24

Isoelectric Point (pI)

37.03

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
LRR_At5g56370	PF24758	101 - 228	2.3e-06	FBD-associated F-box protein At5g56370, LRR repeats
LRR_8	PF13855	102 - 161	7.6e-07	Leucine rich repeat
Pkinase	PF00069	344 - 627	3.4e-41	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	344 - 587	1.1e-36	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0011952)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17870 AT5G46790 AT5G46790
fragaria_vesca	FvH4_5g22060
malus_domestica	MD06G1034000.v1.1 MD16G1274400.v1.1
prunus_persica	Prupe.5G036800_v2.0.a1
pyrus_communis	pycom06g02810 pycom16g24460
rosa_chinensis	RchiOBHm_Chr7g0209681
rosa_laevigata	RLG00000003104
rosa_multiflora	Rmu_sc0002616.1_g000004
rosa_roxburghii	Rroxscaffold_3G00249150
rosa_rugosa	Rorug07G0115400
rosa_samantha	Rh7AG249100 Rh7BG243000 Rh7CG265000 Rh7DG254900
rosa_wichuraiana	Rw7G021120

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	2 cut(s)	1553, 1748
AccI	GTMKAC	1 cut(s)	657
AccIII	TCCGGA	1 cut(s)	860
AciI	CCGC	7 cut(s)	23, 34, 75, 636, 723, 1142, 1202
AclWI	GGATC	6 cut(s)	379, 556, 1458, 1748, 1761, 1902
AcoI	YGGCCR	3 cut(s)	870, 960, 1268
AcsI	RAATTY	2 cut(s)	1194, 1224
AcuI	CTGAAG	4 cut(s)	81, 1362, 1383, 1475
AcyI	GRCGYC	3 cut(s)	189, 1550, 1745
AfaI	GTAC	2 cut(s)	1298, 1659
AfeI	AGCGCT	1 cut(s)	867
AfiI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 782
AflIII	ACRYGT	2 cut(s)	1258, 1323
AjnI	CCWGG	3 cut(s)	624, 781, 1084
Alw21I	GWGCWC	2 cut(s)	318, 1041
Alw26I	GTCTC	2 cut(s)	285, 1855
AlwI	GGATC	6 cut(s)	379, 556, 1458, 1748, 1761, 1902
Ama87I	CYCGRG	2 cut(s)	848, 1652
Aor13HI	TCCGGA	1 cut(s)	860
Aor51HI	AGCGCT	1 cut(s)	867
AoxI	GGCC	3 cut(s)	870, 960, 1268
ApeKI	GCWGC	5 cut(s)	25, 725, 794, 844, 913
ApoI	RAATTY	2 cut(s)	1194, 1224
Asp700I	GAANNNNTTC	1 cut(s)	1396
AspLEI	GCGC	1 cut(s)	868
AspS9I	GGNCC	4 cut(s)	4, 785, 956, 1801
AsuC2I	CCSGG	6 cut(s)	15, 186, 556, 874, 886, 1267
AsuHPI	GGTGA	2 cut(s)	34, 428
AsuII	TTCGAA	1 cut(s)	454
AvaI	CYCGRG	2 cut(s)	848, 1652
AvaII	GGWCC	4 cut(s)	4, 785, 956, 1801
AxyI	CCTNAGG	1 cut(s)	1134
BaeI	ACNNNNGTAYC	2 cut(s)	1577, 1610
BamHI	GGATCC	1 cut(s)	1753
BanII	GRGCYC	2 cut(s)	318, 1041
BbsI	GAAGAC	6 cut(s)	184, 211, 241, 1023, 1167, 1545
Bbv12I	GWGCWC	2 cut(s)	318, 1041
BbvCI	CCTCAGC	1 cut(s)	134
BbvI	GCAGC	5 cut(s)	37, 737, 806, 831, 900
BccI	CCATC	2 cut(s)	796, 1777
BceAI	ACGGC	1 cut(s)	88
BciT130I	CCWGG	3 cut(s)	626, 783, 1086
BclI	TGATCA	1 cut(s)	1662
BcnI	CCSGG	6 cut(s)	15, 186, 556, 874, 886, 1267
BcoDI	GTCTC	2 cut(s)	285, 1855
BfaI	CTAG	2 cut(s)	240, 1866
BfmI	CTRYAG	1 cut(s)	792
BfoI	RGCGCY	1 cut(s)	869
BisI	GCNGC	6 cut(s)	26, 726, 795, 845, 914, 1143
BlsI	GCNGC	6 cut(s)	27, 727, 796, 846, 915, 1144
Bme1390I	CCNGG	9 cut(s)	15, 186, 556, 626, 783, 874, 886, 1086, 1267
Bme18I	GGWCC	4 cut(s)	4, 785, 956, 1801
BmeT110I	CYCGRG	2 cut(s)	848, 1652
BmgT120I	GGNCC	4 cut(s)	4, 785, 956, 1801
BmiI	GGNNCC	4 cut(s)	6, 634, 681, 1755
BmrFI	CCNGG	9 cut(s)	15, 186, 556, 626, 783, 874, 886, 1086, 1267
BmsI	GCATC	1 cut(s)	1176
BoxI	GACNNNNGTC	1 cut(s)	954
BpiI	GAAGAC	6 cut(s)	184, 211, 241, 1023, 1167, 1545
BpmI	CTGGAG	4 cut(s)	401, 759, 765, 1028
Bpu10I	CCTNAGC	2 cut(s)	134, 1758
Bpu14I	TTCGAA	1 cut(s)	454
BpuEI	CTTGAG	2 cut(s)	514, 741
BpuMI	CCSGG	6 cut(s)	15, 186, 556, 874, 886, 1267
BsaHI	GRCGYC	3 cut(s)	189, 1550, 1745
BsaI	GGTCTC	1 cut(s)	1855
BsaJI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1215
BsaWI	WCCGGW	3 cut(s)	860, 1233, 1588
BsaXI	ACNNNNNCTCC	6 cut(s)	12, 42, 455, 467, 485, 497
Bsc4I	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 782
Bse118I	RCCGGY	1 cut(s)	1459
Bse1I	ACTGG	1 cut(s)	406
Bse21I	CCTNAGG	1 cut(s)	1134
Bse3DI	GCAATG	3 cut(s)	534, 1530, 1581
BseAI	TCCGGA	1 cut(s)	860
BseBI	CCWGG	3 cut(s)	626, 783, 1086
BseDI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1215
BseGI	GGATG	4 cut(s)	66, 1061, 1734, 1882
BseLI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 782
BseMI	GCAATG	3 cut(s)	534, 1530, 1581
BseMII	CTCAG	5 cut(s)	148, 443, 607, 1068, 1323
BseNI	ACTGG	1 cut(s)	406
BseRI	GAGGAG	8 cut(s)	20, 29, 47, 50, 53, 254, 829, 948
BseX3I	CGGCCG	1 cut(s)	1268
BseXI	GCAGC	5 cut(s)	37, 737, 806, 831, 900
BseYI	CCCAGC	1 cut(s)	565
Bsh1285I	CGRYCG	1 cut(s)	1271
BshFI	GGCC	3 cut(s)	872, 962, 1270
BsiEI	CGRYCG	1 cut(s)	1271
BsiHKAI	GWGCWC	2 cut(s)	318, 1041
BsiHKCI	CYCGRG	2 cut(s)	848, 1652
BslFI	GGGAC	4 cut(s)	241, 335, 1233, 1249
BslI	CCNNNNNNNGG	5 cut(s)	14, 290, 412, 571, 782
BsmAI	GTCTC	2 cut(s)	285, 1855
BsmFI	GGGAC	4 cut(s)	241, 335, 1233, 1249
BsnI	GGCC	3 cut(s)	872, 962, 1270
Bso31I	GGTCTC	1 cut(s)	1855
BsoBI	CYCGRG	2 cut(s)	848, 1652
Bsp119I	TTCGAA	1 cut(s)	454
Bsp1286I	GDGCHC	2 cut(s)	318, 1041
Bsp13I	TCCGGA	1 cut(s)	860
Bsp143I	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
BspACI	CCGC	7 cut(s)	23, 34, 75, 636, 723, 1142, 1202
BspANI	GGCC	3 cut(s)	872, 962, 1270
BspCNI	CTCAG	5 cut(s)	147, 442, 606, 1069, 1324
BspEI	TCCGGA	1 cut(s)	860
BspLI	GGNNCC	4 cut(s)	6, 634, 681, 1755
BspMAI	CTGCAG	1 cut(s)	796
BspPI	GGATC	6 cut(s)	379, 556, 1458, 1748, 1761, 1902
BspT104I	TTCGAA	1 cut(s)	454
BspTNI	GGTCTC	1 cut(s)	1855
BsrDI	GCAATG	3 cut(s)	534, 1530, 1581
BsrFI	RCCGGY	1 cut(s)	1459
BsrI	ACTGG	1 cut(s)	406
BssAI	RCCGGY	1 cut(s)	1459
BssECI	CCNNGG	5 cut(s)	70, 394, 675, 683, 1215
BssMI	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
BssNI	GRCGYC	3 cut(s)	189, 1550, 1745
BssT1I	CCWWGG	1 cut(s)	683
Bst2UI	CCWGG	3 cut(s)	626, 783, 1086
Bst4CI	ACNGT	6 cut(s)	121, 1216, 1277, 1573, 1680, 1843
Bst6I	CTCTTC	4 cut(s)	327, 442, 554, 806
BstACI	GRCGYC	3 cut(s)	189, 1550, 1745
BstBI	TTCGAA	1 cut(s)	454
BstC8I	GCNNGC	7 cut(s)	842, 870, 1169, 1461, 1515, 1764, 1831
BstDEI	CTNAG	8 cut(s)	134, 429, 593, 642, 1077, 1134, 1332, 1758
BstDSI	CCRYGG	2 cut(s)	70, 1215
BstF5I	GGATG	4 cut(s)	66, 1061, 1734, 1882
BstH2I	RGCGCY	1 cut(s)	869
BstHHI	GCGC	1 cut(s)	868
BstKTI	GATC	7 cut(s)	387, 564, 1209, 1453, 1665, 1756, 1897
BstMAI	GTCTC	2 cut(s)	285, 1855
BstMBI	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
BstMCI	CGRYCG	1 cut(s)	1271
BstMWI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 910, 1499
BstNI	CCWGG	3 cut(s)	626, 783, 1086
BstNSI	RCATGY	4 cut(s)	1262, 1327, 1833, 1891
BstPAI	GACNNNNGTC	1 cut(s)	954
BstSCI	CCNGG	9 cut(s)	13, 184, 554, 624, 781, 872, 884, 1084, 1265
BstSFI	CTRYAG	1 cut(s)	792
BstV1I	GCAGC	5 cut(s)	37, 737, 806, 831, 900
BstV2I	GAAGAC	6 cut(s)	184, 211, 241, 1023, 1167, 1545
BstX2I	RGATCY	4 cut(s)	384, 561, 1450, 1753
BstYI	RGATCY	4 cut(s)	384, 561, 1450, 1753
BstZI	CGGCCG	1 cut(s)	1268
Bsu36I	CCTNAGG	1 cut(s)	1134
BsuRI	GGCC	3 cut(s)	872, 962, 1270
BtgI	CCRYGG	2 cut(s)	70, 1215
BtsCI	GGATG	4 cut(s)	66, 1061, 1734, 1882
BtsIMutI	CAGTG	2 cut(s)	117, 1848
Cac8I	GCNNGC	7 cut(s)	842, 870, 1169, 1461, 1515, 1764, 1831
CfoI	GCGC	1 cut(s)	868
Cfr10I	RCCGGY	1 cut(s)	1459
Cfr13I	GGNCC	4 cut(s)	4, 785, 956, 1801
CseI	GACGC	2 cut(s)	178, 1178
Csp6I	GTAC	2 cut(s)	1297, 1658
CviAII	CATG	8 cut(s)	174, 1259, 1300, 1324, 1418, 1666, 1830, 1888
CviQI	GTAC	2 cut(s)	1297, 1658
DdeI	CTNAG	8 cut(s)	134, 429, 593, 642, 1077, 1134, 1332, 1758
DpnI	GATC	7 cut(s)	386, 563, 1208, 1452, 1664, 1755, 1896
DpnII	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
EaeI	YGGCCR	3 cut(s)	870, 960, 1268
EagI	CGGCCG	1 cut(s)	1268
Eam1104I	CTCTTC	4 cut(s)	327, 442, 554, 806
EarI	CTCTTC	4 cut(s)	327, 442, 554, 806
EciI	GGCGGA	2 cut(s)	23, 1217
Ecl136II	GAGCTC	2 cut(s)	316, 1039
EclXI	CGGCCG	1 cut(s)	1268
Eco130I	CCWWGG	1 cut(s)	683
Eco24I	GRGCYC	2 cut(s)	318, 1041
Eco31I	GGTCTC	1 cut(s)	1855
Eco47I	GGWCC	4 cut(s)	4, 785, 956, 1801
Eco47III	AGCGCT	1 cut(s)	867
Eco52I	CGGCCG	1 cut(s)	1268
Eco53kI	GAGCTC	2 cut(s)	316, 1039
Eco57I	CTGAAG	4 cut(s)	81, 1362, 1383, 1475
Eco81I	CCTNAGG	1 cut(s)	1134
Eco88I	CYCGRG	2 cut(s)	848, 1652
EcoICRI	GAGCTC	2 cut(s)	316, 1039
EcoRII	CCWGG	3 cut(s)	624, 781, 1084
EcoT14I	CCWWGG	1 cut(s)	683
EcoT38I	GRGCYC	2 cut(s)	318, 1041
ErhI	CCWWGG	1 cut(s)	683
FaeI	CATG	8 cut(s)	177, 1262, 1303, 1327, 1421, 1669, 1833, 1891
FalI	AAGNNNNNCTT	4 cut(s)	902, 934, 1008, 1040
FaqI	GGGAC	4 cut(s)	241, 335, 1233, 1249
FatI	CATG	8 cut(s)	173, 1258, 1299, 1323, 1417, 1665, 1829, 1887
FauNDI	CATATG	1 cut(s)	1545
FbaI	TGATCA	1 cut(s)	1662
FblI	GTMKAC	1 cut(s)	657
Fnu4HI	GCNGC	6 cut(s)	26, 726, 795, 845, 914, 1143
FokI	GGATG	4 cut(s)	53, 1068, 1741, 1889
FriOI	GRGCYC	2 cut(s)	318, 1041
Fsp4HI	GCNGC	6 cut(s)	26, 726, 795, 845, 914, 1143
FspBI	CTAG	2 cut(s)	240, 1866
GlaI	GCGC	1 cut(s)	867
GluI	GCNGC	6 cut(s)	26, 726, 795, 845, 914, 1143
GsaI	CCCAGC	1 cut(s)	569
GsuI	CTGGAG	4 cut(s)	401, 759, 765, 1028
HaeII	RGCGCY	1 cut(s)	869
HaeIII	GGCC	3 cut(s)	872, 962, 1270
HgaI	GACGC	2 cut(s)	178, 1178
HhaI	GCGC	1 cut(s)	868
Hin1I	GRCGYC	3 cut(s)	189, 1550, 1745
Hin1II	CATG	8 cut(s)	177, 1262, 1303, 1327, 1421, 1669, 1833, 1891
Hin6I	GCGC	1 cut(s)	866
HinP1I	GCGC	1 cut(s)	866
HincII	GTYRAC	5 cut(s)	343, 367, 658, 1329, 1368
HindII	GTYRAC	5 cut(s)	343, 367, 658, 1329, 1368
HinfI	GANTC	8 cut(s)	207, 243, 348, 950, 1237, 1392, 1714, 1772
HpaI	GTTAAC	1 cut(s)	1368
HphI	GGTGA	2 cut(s)	34, 428
Hpy166II	GTNNAC	9 cut(s)	343, 367, 658, 1061, 1069, 1329, 1368, 1423, 1614
Hpy188III	TCNNGA	5 cut(s)	326, 502, 861, 1007, 1696
Hpy8I	GTNNAC	9 cut(s)	343, 367, 658, 1061, 1069, 1329, 1368, 1423, 1614
Hpy99I	CGWCG	2 cut(s)	662, 1750
HpyAV	CCTTC	7 cut(s)	55, 105, 113, 435, 623, 1337, 1344
HpyCH4III	ACNGT	6 cut(s)	121, 1216, 1277, 1573, 1680, 1843
HpyCH4IV	ACGT	5 cut(s)	225, 660, 1467, 1550, 1745
HpyCH4V	TGCA	8 cut(s)	177, 372, 794, 1385, 1502, 1586, 1839, 1887
HpyF10VI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 910, 1499
HpyF3I	CTNAG	8 cut(s)	134, 429, 593, 642, 1077, 1134, 1332, 1758
HpySE526I	ACGT	5 cut(s)	225, 660, 1467, 1550, 1745
Hsp92I	GRCGYC	3 cut(s)	189, 1550, 1745
Hsp92II	CATG	8 cut(s)	177, 1262, 1303, 1327, 1421, 1669, 1833, 1891
HspAI	GCGC	1 cut(s)	866
Kpn2I	TCCGGA	1 cut(s)	860
KroI	GCCGGC	1 cut(s)	1459
KroNI	GCCGGC	1 cut(s)	1461
Ksp22I	TGATCA	1 cut(s)	1662
KspAI	GTTAAC	1 cut(s)	1368
Kzo9I	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
LmnI	GCTCC	9 cut(s)	33, 638, 778, 784, 816, 863, 876, 1036, 1311
Lsp1109I	GCAGC	5 cut(s)	37, 737, 806, 831, 900
LweI	GCATC	1 cut(s)	1176
MaeI	CTAG	2 cut(s)	240, 1866
MaeII	ACGT	5 cut(s)	225, 660, 1467, 1550, 1745
MalI	GATC	7 cut(s)	386, 563, 1208, 1452, 1664, 1755, 1896
MboI	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
MflI	RGATCY	4 cut(s)	384, 561, 1450, 1753
MhlI	GDGCHC	2 cut(s)	318, 1041
MluCI	AATT	7 cut(s)	745, 1194, 1224, 1355, 1380, 1497, 1778
MlyI	GAGTC	6 cut(s)	201, 237, 357, 944, 1723, 1766
MmeI	TCCRAC	5 cut(s)	237, 498, 1014, 1728, 1872
MroI	TCCGGA	1 cut(s)	860
MroNI	GCCGGC	1 cut(s)	1459
MroXI	GAANNNNTTC	1 cut(s)	1396
MseI	TTAA	5 cut(s)	309, 981, 1113, 1367, 1722
MslI	CAYNNNNRTG	1 cut(s)	1544
MspR9I	CCNGG	9 cut(s)	15, 186, 556, 626, 783, 874, 886, 1086, 1267
MvaI	CCWGG	3 cut(s)	626, 783, 1086
MwoI	GCNNNNNNNGC	6 cut(s)	195, 304, 313, 495, 910, 1499
NaeI	GCCGGC	1 cut(s)	1461
NciI	CCSGG	6 cut(s)	15, 186, 556, 874, 886, 1267
NdeI	CATATG	1 cut(s)	1545
NdeII	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
NgoMIV	GCCGGC	1 cut(s)	1459
NlaIII	CATG	8 cut(s)	177, 1262, 1303, 1327, 1421, 1669, 1833, 1891
NlaIV	GGNNCC	4 cut(s)	6, 634, 681, 1755
NspI	RCATGY	4 cut(s)	1262, 1327, 1833, 1891
NspV	TTCGAA	1 cut(s)	454
PaeI	GCATGC	1 cut(s)	1833
PciI	ACATGT	2 cut(s)	1258, 1323
PcsI	WCGNNNNNNNCGW	1 cut(s)	1547
PdiI	GCCGGC	1 cut(s)	1461
PdmI	GAANNNNTTC	1 cut(s)	1396
PfeI	GAWTC	2 cut(s)	1237, 1392
PflFI	GACNNNGTC	1 cut(s)	347
PfoI	TCCNGGA	2 cut(s)	554, 624
PkrI	GCNGC	6 cut(s)	27, 727, 796, 846, 915, 1144
PleI	GAGTC	6 cut(s)	201, 237, 356, 944, 1722, 1766
PpsI	GAGTC	6 cut(s)	201, 237, 356, 944, 1722, 1766
PscI	ACATGT	2 cut(s)	1258, 1323
PshAI	GACNNNNGTC	1 cut(s)	954
Psp124BI	GAGCTC	2 cut(s)	318, 1041
Psp6I	CCWGG	3 cut(s)	624, 781, 1084
PspFI	CCCAGC	1 cut(s)	565
PspGI	CCWGG	3 cut(s)	624, 781, 1084
PspN4I	GGNNCC	4 cut(s)	6, 634, 681, 1755
PspPI	GGNCC	4 cut(s)	4, 785, 956, 1801
PstI	CTGCAG	1 cut(s)	796
PsuI	RGATCY	4 cut(s)	384, 561, 1450, 1753
PsyI	GACNNNGTC	1 cut(s)	347
RsaI	GTAC	2 cut(s)	1298, 1659
RsaNI	GTAC	2 cut(s)	1297, 1658
RseI	CAYNNNNRTG	1 cut(s)	1544
SacI	GAGCTC	2 cut(s)	318, 1041
SalI	GTCGAC	1 cut(s)	656
SaqAI	TTAA	5 cut(s)	309, 981, 1113, 1367, 1722
SatI	GCNGC	6 cut(s)	26, 726, 795, 845, 914, 1143
Sau3AI	GATC	7 cut(s)	384, 561, 1206, 1450, 1662, 1753, 1894
Sau96I	GGNCC	4 cut(s)	4, 785, 956, 1801
SchI	GAGTC	6 cut(s)	201, 237, 357, 944, 1723, 1766
ScrFI	CCNGG	9 cut(s)	15, 186, 556, 626, 783, 874, 886, 1086, 1267
SduI	GDGCHC	2 cut(s)	318, 1041
SfaNI	GCATC	1 cut(s)	1176
SfcI	CTRYAG	1 cut(s)	792
SfuI	TTCGAA	1 cut(s)	454
SinI	GGWCC	4 cut(s)	4, 785, 956, 1801
SmiMI	CAYNNNNRTG	1 cut(s)	1544
SmlI	CTYRAG	2 cut(s)	493, 756
SmoI	CTYRAG	2 cut(s)	493, 756
SphI	GCATGC	1 cut(s)	1833
Sse9I	AATT	7 cut(s)	745, 1194, 1224, 1355, 1380, 1497, 1778
SsiI	CCGC	7 cut(s)	23, 34, 75, 636, 723, 1142, 1202
SspMI	CTAG	2 cut(s)	240, 1866
SstI	GAGCTC	2 cut(s)	318, 1041
StyD4I	CCNGG	9 cut(s)	13, 184, 554, 624, 781, 872, 884, 1084, 1265
StyI	CCWWGG	1 cut(s)	683
TaaI	ACNGT	6 cut(s)	121, 1216, 1277, 1573, 1680, 1843
TaiI	ACGT	5 cut(s)	228, 663, 1470, 1553, 1748
TaqI	TCGA	7 cut(s)	90, 454, 462, 657, 1228, 1495, 1770
TaqII	GACCGA	1 cut(s)	360
TasI	AATT	7 cut(s)	745, 1194, 1224, 1355, 1380, 1497, 1778
TatI	WGTACW	1 cut(s)	1296
TauI	GCSGC	1 cut(s)	1145
TfiI	GAWTC	2 cut(s)	1237, 1392
Tru1I	TTAA	5 cut(s)	309, 981, 1113, 1367, 1722
Tru9I	TTAA	5 cut(s)	309, 981, 1113, 1367, 1722
TscAI	CASTG	2 cut(s)	124, 1848
TseI	GCWGC	5 cut(s)	25, 725, 794, 844, 913
TspDTI	ATGAA	6 cut(s)	682, 880, 1190, 1316, 1570, 1745
TspGWI	ACGGA	1 cut(s)	1169
TspRI	CASTG	2 cut(s)	124, 1848
Tth111I	GACNNNGTC	1 cut(s)	347
VpaK11BI	GGWCC	4 cut(s)	4, 785, 956, 1801
XapI	RAATTY	2 cut(s)	1194, 1224
XceI	RCATGY	4 cut(s)	1262, 1327, 1833, 1891
XmiI	GTMKAC	1 cut(s)	657
XmnI	GAANNNNTTC	1 cut(s)	1396
XspI	CTAG	2 cut(s)	240, 1866
ZraI	GACGTC	2 cut(s)	1551, 1746

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.