ribosome biogenesis protein
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT2G44860 AT2G44860 |
| fragaria_vesca | FvH4_3g24270 |
| malus_domestica | MD03G1135200.v1.1 MD11G1157900.v1.1 |
| prunus_persica | Prupe.5G055500_v2.0.a1 Prupe.5G055500_v2.0.a1 Prupe.5G055500_v2.0.a1 Prupe.6G119600_v2.0.a1 |
| pyrus_communis | pycom03g09110 pycom11g12820 |
| rosa_chinensis | RchiOBHm_Chr5g0043411 |
| rosa_laevigata | RLG00000034185 |
| rosa_multiflora | Rmu_sc0000060.1_g000067 |
| rosa_roxburghii | Rroxscaffold_1G00037470 |
| rosa_rugosa | Rorug05G0205700 Rorug05G0205700 |
| rosa_samantha | Rh5AG291500 Rh5BG298100 Rh5CG327600 Rh5DG307500 |
| rosa_wichuraiana | Rw5G027040 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AciI | CCGC | 1 cut(s) | 169 |
| AclWI | GGATC | 2 cut(s) | 93, 422 |
| AcuI | CTGAAG | 1 cut(s) | 290 |
| AfiI | CCNNNNNNNGG | 2 cut(s) | 50, 168 |
| AgsI | TTSAA | 1 cut(s) | 439 |
| AjnI | CCWGG | 1 cut(s) | 43 |
| AluBI | AGCT | 2 cut(s) | 396, 407 |
| AluI | AGCT | 2 cut(s) | 396, 407 |
| Alw21I | GWGCWC | 1 cut(s) | 360 |
| AlwI | GGATC | 2 cut(s) | 93, 422 |
| AoxI | GGCC | 5 cut(s) | 159, 230, 273, 312, 348 |
| ApeKI | GCWGC | 2 cut(s) | 368, 472 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 188, 220 |
| Bbv12I | GWGCWC | 1 cut(s) | 360 |
| BbvI | GCAGC | 2 cut(s) | 380, 484 |
| BccI | CCATC | 2 cut(s) | 439, 490 |
| BciT130I | CCWGG | 1 cut(s) | 45 |
| BciVI | GTATCC | 1 cut(s) | 51 |
| BfmI | CTRYAG | 1 cut(s) | 163 |
| BfuI | GTATCC | 1 cut(s) | 51 |
| BisI | GCNGC | 2 cut(s) | 369, 473 |
| BlsI | GCNGC | 2 cut(s) | 370, 474 |
| Bme1390I | CCNGG | 1 cut(s) | 45 |
| BmrFI | CCNGG | 1 cut(s) | 45 |
| BmsI | GCATC | 2 cut(s) | 64, 399 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 121, 153 |
| Bsa29I | ATCGAT | 1 cut(s) | 288 |
| BsaJI | CCNNGG | 1 cut(s) | 351 |
| Bsc4I | CCNNNNNNNGG | 2 cut(s) | 50, 168 |
| BseBI | CCWGG | 1 cut(s) | 45 |
| BseCI | ATCGAT | 1 cut(s) | 288 |
| BseDI | CCNNGG | 1 cut(s) | 351 |
| BseGI | GGATG | 1 cut(s) | 339 |
| BseLI | CCNNNNNNNGG | 2 cut(s) | 50, 168 |
| BseMII | CTCAG | 1 cut(s) | 225 |
| BseXI | GCAGC | 2 cut(s) | 380, 484 |
| BshFI | GGCC | 5 cut(s) | 161, 232, 275, 314, 350 |
| BshVI | ATCGAT | 1 cut(s) | 288 |
| BsiHKAI | GWGCWC | 1 cut(s) | 360 |
| BslI | CCNNNNNNNGG | 2 cut(s) | 50, 168 |
| BsnI | GGCC | 5 cut(s) | 161, 232, 275, 314, 350 |
| Bsp1286I | GDGCHC | 1 cut(s) | 360 |
| Bsp143I | GATC | 4 cut(s) | 98, 285, 427, 447 |
| BspACI | CCGC | 1 cut(s) | 169 |
| BspANI | GGCC | 5 cut(s) | 161, 232, 275, 314, 350 |
| BspCNI | CTCAG | 1 cut(s) | 226 |
| BspDI | ATCGAT | 1 cut(s) | 288 |
| BspPI | GGATC | 2 cut(s) | 93, 422 |
| BssECI | CCNNGG | 1 cut(s) | 351 |
| BssMI | GATC | 4 cut(s) | 98, 285, 427, 447 |
| BssT1I | CCWWGG | 1 cut(s) | 351 |
| Bst2UI | CCWGG | 1 cut(s) | 45 |
| Bst4CI | ACNGT | 1 cut(s) | 37 |
| Bst6I | CTCTTC | 2 cut(s) | 122, 323 |
| BstDEI | CTNAG | 2 cut(s) | 156, 234 |
| BstF5I | GGATG | 1 cut(s) | 339 |
| BstKTI | GATC | 4 cut(s) | 101, 288, 430, 450 |
| BstMBI | GATC | 4 cut(s) | 98, 285, 427, 447 |
| BstMWI | GCNNNNNNNGC | 1 cut(s) | 229 |
| BstNI | CCWGG | 1 cut(s) | 45 |
| BstSCI | CCNGG | 1 cut(s) | 43 |
| BstSFI | CTRYAG | 1 cut(s) | 163 |
| BstV1I | GCAGC | 2 cut(s) | 380, 484 |
| BstX2I | RGATCY | 2 cut(s) | 98, 427 |
| BstYI | RGATCY | 2 cut(s) | 98, 427 |
| Bsu15I | ATCGAT | 1 cut(s) | 288 |
| BsuI | GTATCC | 1 cut(s) | 51 |
| BsuRI | GGCC | 5 cut(s) | 161, 232, 275, 314, 350 |
| BsuTUI | ATCGAT | 1 cut(s) | 288 |
| BtsCI | GGATG | 1 cut(s) | 339 |
| ClaI | ATCGAT | 1 cut(s) | 288 |
| CviAII | CATG | 3 cut(s) | 50, 323, 493 |
| CviJI | RGCY | 9 cut(s) | 161, 232, 275, 314, 350, 396, 407, 475, 486 |
| CviKI_1 | RGCY | 9 cut(s) | 161, 232, 275, 314, 350, 396, 407, 475, 486 |
| DdeI | CTNAG | 2 cut(s) | 156, 234 |
| DpnI | GATC | 4 cut(s) | 100, 287, 429, 449 |
| DpnII | GATC | 4 cut(s) | 98, 285, 427, 447 |
| DraI | TTTAAA | 1 cut(s) | 121 |
| Eam1104I | CTCTTC | 2 cut(s) | 122, 323 |
| EarI | CTCTTC | 2 cut(s) | 122, 323 |
| Eco130I | CCWWGG | 1 cut(s) | 351 |
| Eco147I | AGGCCT | 2 cut(s) | 161, 232 |
| Eco57I | CTGAAG | 1 cut(s) | 290 |
| EcoRII | CCWGG | 1 cut(s) | 43 |
| EcoT14I | CCWWGG | 1 cut(s) | 351 |
| ErhI | CCWWGG | 1 cut(s) | 351 |
| FaeI | CATG | 3 cut(s) | 53, 326, 496 |
| FaiI | YATR | 6 cut(s) | 51, 165, 188, 243, 324, 494 |
| FatI | CATG | 3 cut(s) | 49, 322, 492 |
| Fnu4HI | GCNGC | 2 cut(s) | 369, 473 |
| FokI | GGATG | 1 cut(s) | 346 |
| Fsp4HI | GCNGC | 2 cut(s) | 369, 473 |
| GluI | GCNGC | 2 cut(s) | 369, 473 |
| HaeIII | GGCC | 5 cut(s) | 161, 232, 275, 314, 350 |
| Hin1II | CATG | 3 cut(s) | 53, 326, 496 |
| HinfI | GANTC | 4 cut(s) | 55, 133, 197, 250 |
| Hpy188I | TCNGA | 1 cut(s) | 270 |
| HpyAV | CCTTC | 4 cut(s) | 175, 265, 331, 340 |
| HpyCH4III | ACNGT | 1 cut(s) | 37 |
| HpyCH4V | TGCA | 1 cut(s) | 77 |
| HpyF10VI | GCNNNNNNNGC | 1 cut(s) | 229 |
| HpyF3I | CTNAG | 2 cut(s) | 156, 234 |
| Hsp92II | CATG | 3 cut(s) | 53, 326, 496 |
| Kzo9I | GATC | 4 cut(s) | 98, 285, 427, 447 |
| LmnI | GCTCC | 2 cut(s) | 355, 412 |
| LpnPI | CCDG | 8 cut(s) | 4, 30, 57, 179, 232, 246, 328, 346 |
| Lsp1109I | GCAGC | 2 cut(s) | 380, 484 |
| LweI | GCATC | 2 cut(s) | 64, 399 |
| MalI | GATC | 4 cut(s) | 100, 287, 429, 449 |
| MboI | GATC | 4 cut(s) | 98, 285, 427, 447 |
| MboII | GAAGA | 3 cut(s) | 139, 295, 340 |
| MflI | RGATCY | 2 cut(s) | 98, 427 |
| MhlI | GDGCHC | 1 cut(s) | 360 |
| MlyI | GAGTC | 1 cut(s) | 191 |
| MmeI | TCCRAC | 1 cut(s) | 360 |
| MnlI | CCTC | 8 cut(s) | 40, 123, 147, 304, 324, 358, 493, 497 |
| MseI | TTAA | 2 cut(s) | 120, 279 |
| MspR9I | CCNGG | 1 cut(s) | 45 |
| MvaI | CCWGG | 1 cut(s) | 45 |
| MwoI | GCNNNNNNNGC | 1 cut(s) | 229 |
| NdeII | GATC | 4 cut(s) | 98, 285, 427, 447 |
| NlaIII | CATG | 3 cut(s) | 53, 326, 496 |
| PceI | AGGCCT | 2 cut(s) | 161, 232 |
| PfeI | GAWTC | 3 cut(s) | 55, 133, 250 |
| PfoI | TCCNGGA | 1 cut(s) | 43 |
| PkrI | GCNGC | 2 cut(s) | 370, 474 |
| PleI | GAGTC | 1 cut(s) | 191 |
| PpsI | GAGTC | 1 cut(s) | 191 |
| Psp6I | CCWGG | 1 cut(s) | 43 |
| PspGI | CCWGG | 1 cut(s) | 43 |
| PsuI | RGATCY | 2 cut(s) | 98, 427 |
| SaqAI | TTAA | 2 cut(s) | 120, 279 |
| SatI | GCNGC | 2 cut(s) | 369, 473 |
| Sau3AI | GATC | 4 cut(s) | 98, 285, 427, 447 |
| SchI | GAGTC | 1 cut(s) | 191 |
| ScrFI | CCNGG | 1 cut(s) | 45 |
| SduI | GDGCHC | 1 cut(s) | 360 |
| SetI | ASST | 7 cut(s) | 8, 147, 206, 398, 409, 456, 462 |
| SfaNI | GCATC | 2 cut(s) | 64, 399 |
| SfcI | CTRYAG | 1 cut(s) | 163 |
| SseBI | AGGCCT | 2 cut(s) | 161, 232 |
| SsiI | CCGC | 1 cut(s) | 169 |
| StuI | AGGCCT | 2 cut(s) | 161, 232 |
| StyD4I | CCNGG | 1 cut(s) | 43 |
| StyI | CCWWGG | 1 cut(s) | 351 |
| TaaI | ACNGT | 1 cut(s) | 37 |
| TaqI | TCGA | 3 cut(s) | 88, 200, 288 |
| TfiI | GAWTC | 3 cut(s) | 55, 133, 250 |
| Tru1I | TTAA | 2 cut(s) | 120, 279 |
| Tru9I | TTAA | 2 cut(s) | 120, 279 |
| TseI | GCWGC | 2 cut(s) | 368, 472 |
| TspDTI | ATGAA | 2 cut(s) | 140, 350 |