Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0015008

Physical Location & Seq

Genomic Coordinates Reverse (-)

8169980 .. 8171550

Gene Structure 1571 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G067600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 747 bp

ATGGTGAAGTTGGCTTTTGGTAGCTTTGGTGACTCGTTTAGTGTTGGCTCCCTCAAGTCCTATCTAGCTGAGTTCATTGCCACCCTTCTTTTTGTGTTTGCTGGTGTTGGATCTGCCATTGCTTACGGTAAGCTGACATCAGCAGCCTTGGACCCTGCGGGACTGGTAGCGGTGGCCATAGCCCATGCATTTGCACTGTTTGTGGGGGTCTCTATTGCTGCAAACATCTCAGGTGGCCATTTGAACCCAGCTGTCACACTTGGATTGGCCATTGGAGGCAACATCACCATCCTCACTGGCATATTCTACTGGATTGCCCAACTCTTGGGCTCCATCGTTGCCAGCTTTCTCCTCAAGTTTGTCACTCAATTGGATGTGCCAACCCATACACTTGCCTCAGGGGTAGGTGCAATTGAGGGAGTGGTATTTGAGATCATCATAACCTTTGCTCTGGTCTACACTGTCTATGCCACAGCTGCTGACCCCAAGAAGGGTTCACTGGGAATCATAGCACCCATTGCAATTGGGTTCATTGTTGGGGCCAACATTCTTGCCGCCGGCCCATTCAGCGGTGGCTCGATGAACCCCGCCCGGTCGTTTGGCCCAGCTGTTGCCAGCGGAGACTTCACCGACAACTGGATCTACTGGGTCGGCCCACTAATTGGTGGTGGGCTGGCCGGGCTCGTCTATGGTGACATTTTCATTGGGTCCTATAGCCCAGTCCCCGCAGCTGAAGATTATGCTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000322 GO:0000325 GO:0000326 GO:0003674 GO:0005215 GO:0005275 GO:0005372 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005773 GO:0005774 GO:0005886 GO:0005887 GO:0006810 GO:0006811 GO:0006812 GO:0006833 GO:0008150 GO:0008324 GO:0008519 GO:0009507 GO:0009536 GO:0009705 GO:0015075 GO:0015101 GO:0015200 GO:0015250 GO:0015267 GO:0015318 GO:0015695 GO:0015696 GO:0015837 GO:0015843 GO:0016020 GO:0016021 GO:0019755 GO:0022803 GO:0022838 GO:0022857 GO:0031090 GO:0031224 GO:0031226 GO:0032586 GO:0034220 GO:0042044 GO:0042807 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044425 GO:0044437 GO:0044444 GO:0044446 GO:0044459 GO:0044464 GO:0051179 GO:0051234 GO:0055085 GO:0071702 GO:0071705 GO:0071944 GO:0072488 GO:0072489 GO:0098588 GO:0098655 GO:0098805

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

MIP

Protein Analysis

249

Amino Acids

25.09

Weight (kDa)

4.86

Isoelectric Point (pI)

25.44

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015008)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G17340 AT5G47450
fragaria_vesca	FvH4_5g19110
malus_domestica	MD06G1056900.v1.1
prunus_persica	Prupe.5G067600_v2.0.a1
pyrus_communis	pycom06g04750
rosa_chinensis	RchiOBHm_Chr7g0203581
rosa_laevigata	RLG00000003516
rosa_multiflora	Rmu_sc0010675.1_g000005
rosa_roxburghii	Rroxscaffold_3G00253660
rosa_rugosa	Rorug07G0077200
rosa_samantha	Rh7AG206900 Rh7BG206400 Rh7CG219500 Rh7DG214100
rosa_wichuraiana	Rw7G018050

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	325, 662
AccI	GTMKAC	1 cut(s)	456
AciI	CCGC	7 cut(s)	158, 170, 555, 570, 588, 618, 726
AclWI	GGATC	2 cut(s)	118, 647
AcoI	YGGCCR	4 cut(s)	174, 235, 267, 675
AfiI	CCNNNNNNNGG	6 cut(s)	325, 490, 491, 569, 636, 662
AgsI	TTSAA	1 cut(s)	244
AluBI	AGCT	8 cut(s)	24, 68, 133, 251, 345, 476, 608, 731
AluI	AGCT	8 cut(s)	24, 68, 133, 251, 345, 476, 608, 731
Alw26I	GTCTC	2 cut(s)	214, 615
AlwI	GGATC	2 cut(s)	118, 647
AlwNI	CAGNNNCTG	1 cut(s)	479
AoxI	GGCC	8 cut(s)	174, 235, 267, 540, 559, 601, 652, 675
ApeKI	GCWGC	4 cut(s)	143, 218, 476, 728
AspS9I	GGNCC	6 cut(s)	151, 540, 560, 602, 653, 708
AsuC2I	CCSGG	2 cut(s)	592, 679
AsuHPI	GGTGA	5 cut(s)	16, 41, 277, 619, 704
AvaII	GGWCC	2 cut(s)	151, 708
AxyI	CCTNAGG	1 cut(s)	397
BalI	TGGCCA	3 cut(s)	176, 237, 269
BanII	GRGCYC	2 cut(s)	332, 684
BbvI	GCAGC	4 cut(s)	155, 205, 463, 740
BccI	CCATC	2 cut(s)	296, 341
BcnI	CCSGG	2 cut(s)	592, 679
BcoDI	GTCTC	2 cut(s)	214, 615
BfaI	CTAG	1 cut(s)	65
BfmI	CTRYAG	1 cut(s)	712
BisI	GCNGC	5 cut(s)	144, 219, 477, 555, 729
BlsI	GCNGC	5 cut(s)	145, 220, 478, 556, 730
Bme1390I	CCNGG	2 cut(s)	592, 679
Bme18I	GGWCC	2 cut(s)	151, 708
BmgT120I	GGNCC	6 cut(s)	151, 540, 560, 602, 653, 708
BmiI	GGNNCC	5 cut(s)	49, 153, 331, 541, 709
BmrFI	CCNGG	2 cut(s)	592, 679
BmrI	ACTGGG	3 cut(s)	509, 655, 713
BmuI	ACTGGG	3 cut(s)	509, 655, 713
BpuEI	CTTGAG	2 cut(s)	38, 338
BpuMI	CCSGG	2 cut(s)	592, 679
BsaI	GGTCTC	1 cut(s)	214
BsaJI	CCNNGG	1 cut(s)	147
Bsc4I	CCNNNNNNNGG	6 cut(s)	325, 490, 491, 569, 636, 662
Bse118I	RCCGGY	1 cut(s)	557
Bse1I	ACTGG	7 cut(s)	168, 301, 314, 504, 641, 650, 719
Bse21I	CCTNAGG	1 cut(s)	397
Bse3DI	GCAATG	3 cut(s)	75, 117, 516
BseDI	CCNNGG	1 cut(s)	147
BseGI	GGATG	2 cut(s)	288, 379
BseLI	CCNNNNNNNGG	6 cut(s)	325, 490, 491, 569, 636, 662
BseMI	GCAATG	3 cut(s)	75, 117, 516
BseMII	CTCAG	3 cut(s)	60, 243, 411
BseNI	ACTGG	7 cut(s)	168, 301, 314, 504, 641, 650, 719
BseRI	GAGGAG	1 cut(s)	341
BseXI	GCAGC	4 cut(s)	155, 205, 463, 740
BseYI	CCCAGC	2 cut(s)	247, 604
Bsh1285I	CGRYCG	1 cut(s)	596
BshFI	GGCC	8 cut(s)	176, 237, 269, 542, 561, 603, 654, 677
BsiEI	CGRYCG	1 cut(s)	596
BsiSI	CCGG	3 cut(s)	558, 592, 678
BslFI	GGGAC	2 cut(s)	174, 707
BslI	CCNNNNNNNGG	6 cut(s)	325, 490, 491, 569, 636, 662
BsmAI	GTCTC	2 cut(s)	214, 615
BsmFI	GGGAC	2 cut(s)	174, 707
BsnI	GGCC	8 cut(s)	176, 237, 269, 542, 561, 603, 654, 677
Bso31I	GGTCTC	1 cut(s)	214
Bsp1286I	GDGCHC	2 cut(s)	332, 684
Bsp143I	GATC	3 cut(s)	110, 432, 639
BspACI	CCGC	7 cut(s)	158, 170, 555, 570, 588, 618, 726
BspANI	GGCC	8 cut(s)	176, 237, 269, 542, 561, 603, 654, 677
BspCNI	CTCAG	3 cut(s)	61, 242, 410
BspLI	GGNNCC	5 cut(s)	49, 153, 331, 541, 709
BspPI	GGATC	2 cut(s)	118, 647
BspTNI	GGTCTC	1 cut(s)	214
BsrDI	GCAATG	3 cut(s)	75, 117, 516
BsrFI	RCCGGY	1 cut(s)	557
BsrI	ACTGG	7 cut(s)	168, 301, 314, 504, 641, 650, 719
BssAI	RCCGGY	1 cut(s)	557
BssECI	CCNNGG	1 cut(s)	147
BssMI	GATC	3 cut(s)	110, 432, 639
BssT1I	CCWWGG	1 cut(s)	147
Bst4CI	ACNGT	3 cut(s)	128, 198, 463
BstAPI	GCANNNNNTGC	1 cut(s)	518
BstC8I	GCNNGC	4 cut(s)	343, 559, 616, 675
BstDEI	CTNAG	3 cut(s)	69, 229, 397
BstF5I	GGATG	2 cut(s)	288, 379
BstKTI	GATC	3 cut(s)	113, 435, 642
BstMAI	GTCTC	2 cut(s)	214, 615
BstMBI	GATC	3 cut(s)	110, 432, 639
BstMCI	CGRYCG	1 cut(s)	596
BstMWI	GCNNNNNNNGC	4 cut(s)	476, 518, 567, 679
BstSCI	CCNGG	2 cut(s)	590, 677
BstSFI	CTRYAG	1 cut(s)	712
BstV1I	GCAGC	4 cut(s)	155, 205, 463, 740
BstX2I	RGATCY	2 cut(s)	110, 639
BstYI	RGATCY	2 cut(s)	110, 639
Bsu36I	CCTNAGG	1 cut(s)	397
BsuRI	GGCC	8 cut(s)	176, 237, 269, 542, 561, 603, 654, 677
BtsCI	GGATG	2 cut(s)	288, 379
BtsIMutI	CAGTG	4 cut(s)	194, 294, 459, 497
Cac8I	GCNNGC	4 cut(s)	343, 559, 616, 675
CaiI	CAGNNNCTG	1 cut(s)	479
Cfr10I	RCCGGY	1 cut(s)	557
Cfr13I	GGNCC	6 cut(s)	151, 540, 560, 602, 653, 708
CviAII	CATG	1 cut(s)	185
DdeI	CTNAG	3 cut(s)	69, 229, 397
DpnI	GATC	3 cut(s)	112, 434, 641
DpnII	GATC	3 cut(s)	110, 432, 639
EaeI	YGGCCR	4 cut(s)	174, 235, 267, 675
Eco130I	CCWWGG	1 cut(s)	147
Eco24I	GRGCYC	2 cut(s)	332, 684
Eco31I	GGTCTC	1 cut(s)	214
Eco47I	GGWCC	2 cut(s)	151, 708
Eco81I	CCTNAGG	1 cut(s)	397
EcoO109I	RGGNCCY	1 cut(s)	708
EcoT14I	CCWWGG	1 cut(s)	147
EcoT22I	ATGCAT	1 cut(s)	190
EcoT38I	GRGCYC	2 cut(s)	332, 684
ErhI	CCWWGG	1 cut(s)	147
FaeI	CATG	1 cut(s)	188
FaqI	GGGAC	2 cut(s)	174, 707
FatI	CATG	1 cut(s)	184
FauI	CCCGC	3 cut(s)	151, 595, 733
FblI	GTMKAC	1 cut(s)	456
Fnu4HI	GCNGC	5 cut(s)	144, 219, 477, 555, 729
FokI	GGATG	2 cut(s)	275, 386
FriOI	GRGCYC	2 cut(s)	332, 684
Fsp4HI	GCNGC	5 cut(s)	144, 219, 477, 555, 729
FspBI	CTAG	1 cut(s)	65
GluI	GCNGC	5 cut(s)	144, 219, 477, 555, 729
GsaI	CCCAGC	2 cut(s)	251, 608
HaeIII	GGCC	8 cut(s)	176, 237, 269, 542, 561, 603, 654, 677
HapII	CCGG	3 cut(s)	558, 592, 678
Hin1II	CATG	1 cut(s)	188
HinfI	GANTC	2 cut(s)	32, 504
HpaII	CCGG	3 cut(s)	558, 592, 678
HphI	GGTGA	5 cut(s)	16, 41, 277, 619, 704
Hpy166II	GTNNAC	2 cut(s)	457, 497
Hpy8I	GTNNAC	2 cut(s)	457, 497
HpyAV	CCTTC	2 cut(s)	95, 484
HpyCH4III	ACNGT	3 cut(s)	128, 198, 463
HpyCH4V	TGCA	5 cut(s)	188, 194, 221, 410, 521
HpyF10VI	GCNNNNNNNGC	4 cut(s)	476, 518, 567, 679
HpyF3I	CTNAG	3 cut(s)	69, 229, 397
Hsp92II	CATG	1 cut(s)	188
KroI	GCCGGC	1 cut(s)	557
KroNI	GCCGGC	1 cut(s)	559
Kzo9I	GATC	3 cut(s)	110, 432, 639
LmnI	GCTCC	2 cut(s)	53, 335
Lsp1109I	GCAGC	4 cut(s)	155, 205, 463, 740
MaeI	CTAG	1 cut(s)	65
MaeIII	GTNAC	4 cut(s)	29, 253, 361, 692
MalI	GATC	3 cut(s)	112, 434, 641
MboI	GATC	3 cut(s)	110, 432, 639
MboII	GAAGA	1 cut(s)	746
MfeI	CAATTG	3 cut(s)	368, 411, 522
MflI	RGATCY	2 cut(s)	110, 639
MhlI	GDGCHC	2 cut(s)	332, 684
MlsI	TGGCCA	3 cut(s)	176, 237, 269
MluCI	AATT	4 cut(s)	368, 411, 522, 660
MluNI	TGGCCA	3 cut(s)	176, 237, 269
MlyI	GAGTC	1 cut(s)	26
MmeI	TCCRAC	1 cut(s)	88
MnlI	CCTC	6 cut(s)	62, 269, 302, 362, 406, 409
Mox20I	TGGCCA	3 cut(s)	176, 237, 269
Mph1103I	ATGCAT	1 cut(s)	190
MroNI	GCCGGC	1 cut(s)	557
MscI	TGGCCA	3 cut(s)	176, 237, 269
MseI	TTAA	1 cut(s)	745
Msp20I	TGGCCA	3 cut(s)	176, 237, 269
MspA1I	CMGCKG	6 cut(s)	251, 476, 570, 608, 618, 731
MspI	CCGG	3 cut(s)	558, 592, 678
MspR9I	CCNGG	2 cut(s)	592, 679
MunI	CAATTG	3 cut(s)	368, 411, 522
MwoI	GCNNNNNNNGC	4 cut(s)	476, 518, 567, 679
NaeI	GCCGGC	1 cut(s)	559
NciI	CCSGG	2 cut(s)	592, 679
NdeII	GATC	3 cut(s)	110, 432, 639
NgoMIV	GCCGGC	1 cut(s)	557
NlaIII	CATG	1 cut(s)	188
NlaIV	GGNNCC	5 cut(s)	49, 153, 331, 541, 709
NmuCI	GTSAC	4 cut(s)	29, 253, 361, 692
NsiI	ATGCAT	1 cut(s)	190
PdiI	GCCGGC	1 cut(s)	559
PfeI	GAWTC	1 cut(s)	504
PflMI	CCANNNNNTGG	2 cut(s)	325, 662
PkrI	GCNGC	5 cut(s)	145, 220, 478, 556, 730
PleI	GAGTC	1 cut(s)	26
PpsI	GAGTC	1 cut(s)	26
PpuMI	RGGWCCY	1 cut(s)	708
Psp5II	RGGWCCY	1 cut(s)	708
PspFI	CCCAGC	2 cut(s)	247, 604
PspN4I	GGNNCC	5 cut(s)	49, 153, 331, 541, 709
PspPI	GGNCC	6 cut(s)	151, 540, 560, 602, 653, 708
PspPPI	RGGWCCY	1 cut(s)	708
PstNI	CAGNNNCTG	1 cut(s)	479
PsuI	RGATCY	2 cut(s)	110, 639
PvuII	CAGCTG	4 cut(s)	251, 476, 608, 731
SaqAI	TTAA	1 cut(s)	745
SatI	GCNGC	5 cut(s)	144, 219, 477, 555, 729
Sau3AI	GATC	3 cut(s)	110, 432, 639
Sau96I	GGNCC	6 cut(s)	151, 540, 560, 602, 653, 708
SchI	GAGTC	1 cut(s)	26
ScrFI	CCNGG	2 cut(s)	592, 679
SduI	GDGCHC	2 cut(s)	332, 684
SfcI	CTRYAG	1 cut(s)	712
SinI	GGWCC	2 cut(s)	151, 708
SmlI	CTYRAG	2 cut(s)	53, 353
SmoI	CTYRAG	2 cut(s)	53, 353
Sse9I	AATT	4 cut(s)	368, 411, 522, 660
SsiI	CCGC	7 cut(s)	158, 170, 555, 570, 588, 618, 726
SspMI	CTAG	1 cut(s)	65
StyD4I	CCNGG	2 cut(s)	590, 677
StyI	CCWWGG	1 cut(s)	147
TaaI	ACNGT	3 cut(s)	128, 198, 463
TaqI	TCGA	1 cut(s)	578
TasI	AATT	4 cut(s)	368, 411, 522, 660
TauI	GCSGC	1 cut(s)	557
TfiI	GAWTC	1 cut(s)	504
Tru1I	TTAA	1 cut(s)	745
Tru9I	TTAA	1 cut(s)	745
TscAI	CASTG	4 cut(s)	201, 301, 466, 504
TseFI	GTSAC	4 cut(s)	29, 253, 361, 692
TseI	GCWGC	4 cut(s)	143, 218, 476, 728
Tsp45I	GTSAC	4 cut(s)	29, 253, 361, 692
TspDTI	ATGAA	4 cut(s)	64, 520, 596, 691
TspRI	CASTG	4 cut(s)	201, 301, 466, 504
Van91I	CCANNNNNTGG	2 cut(s)	325, 662
VpaK11BI	GGWCC	2 cut(s)	151, 708
XmiI	GTMKAC	1 cut(s)	456
XspI	CTAG	1 cut(s)	65
Zsp2I	ATGCAT	1 cut(s)	190

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.