Prupe.5G082600_v2.0.a1

sodium metabolite cotransporter

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
9585325 .. 9589533
4209 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G082600.1

Sequence Viewer

Length: 1221 bp
ATGGCTTTGCATGCTCCAGTCAATAACCAGCAGTGTCAGATTCACCGTCTAAATCTCCATCATCGAACCCAAATTCAGCTCCGAAATCTCTATTTCAACATCCCAATCTCGCAGTCTCGAGGCTTCTCCCTTCGTTCGCGCTCGATTTCACATCCTCTGTTGTTGCGCAGATGTGTATCGGAGAAGATTTCGGGTTCTTTCGATCCGGATTCGGGTCGAAATTATGCATCCGGACCACCGCAGATCCCTCAACAAAATAATGTTTCTTTTGTGGAGGTCCTGAAGAAATCAAATTCTTTCCTGCCACATGTAACCCTTGCTAGTACGCTGTTGGCTCTTGTCTTTCCACCTTCTTTCACATGGTTTACCAACAGGTACTATGCACCTGCCTTGGGGTTTTTGATGTTTGCAGTGGGGGTTAATTCCAGCGAAAAGGATTTCCTCGAAGCTTTCAAGAGACCAACAGCTATTCTTGCCGGTTATATTGGCCAATTTCTTGTCAAGCCGCTTCTTGGATATATTTTTGGCATTATCTCAGTATCAATATTTGGTCTTCCAACTCCAGTAGGTGCTGGAATTATGTTGGTATCTTGTGTTAGCGGCGCCCAGCTCTCAAATTATGCTACTTTTCTGACGGACCCGCCAATGGCCCCTCTAAGCATTGTCATGACATCACTGTCTACTGCTACTGCAGTAATCATCACACCACTCTTATCACTCTTGCTCATCGGAAAGAGACTGCCTGTTGATGTAAAGGGAATGGTGTCCAGCATTCTGCAGATTGTAGTTACACCAGTTGCTGCAGGGTTGCTTTTGAATCGGTTCTTTCCCCGAATATGCGATGCTATTCGGCCATTTTTGCCTCCGTTATCTGTATTAGTTACAGCTTGCTGTGTTGGAGCACCACTTGCCATTAACATTGAGTCTGTTACATCTCCTTTTGGACTAACCATTTTGTTGCTTATTATCGCATTTCATTTTACCGCCTTTGTAGCTGGTTATTTCCTTACTGGCATGGTCTTTCATAAGACACCTGATGTCAAAGCACTACAAAGAACACTATCCTATGAGACAGGAATGCAAAGCAGTCTTCTGGCCCTTGCCCTTGCAAACAGATTTTTCCAAGATCCACTTGTTGGAGTGCCTCCGGCCATCTCTACTGTAATCATGTCTTTGATGGGCTTCTCTCTTGTCATGGTTTGGGCCAAAAGGAAAGAATAA

Protein Analysis

407

Amino Acids

44.22

Weight (kDa)

9.84

Isoelectric Point (pI)

44.05

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 394
AasI GACNNNNNNGTC 1 cut(s) 676
Acc16I TGCGCA 1 cut(s) 167
Acc36I ACCTGC 1 cut(s) 394
AccB1I GGYRCC 1 cut(s) 602
AccB7I CCANNNNNTGG 1 cut(s) 1136
AccI GTMKAC 1 cut(s) 680
AccII CGCG 1 cut(s) 139
AccIII TCCGGA 2 cut(s) 205, 230
AciI CCGC 5 cut(s) 239, 506, 600, 641, 984
AclWI GGATC 3 cut(s) 197, 238, 1121
AcoI YGGCCR 3 cut(s) 487, 851, 1149
AcsI RAATTY 2 cut(s) 72, 292
AcuI CTGAAG 1 cut(s) 302
AcyI GRCGYC 1 cut(s) 603
AfaI GTAC 2 cut(s) 325, 377
AfiI CCNNNNNNNGG 5 cut(s) 212, 392, 512, 646, 1136
AflIII ACRYGT 1 cut(s) 307
AgsI TTSAA 3 cut(s) 97, 454, 817
AluBI AGCT 6 cut(s) 79, 449, 467, 610, 887, 995
AluI AGCT 6 cut(s) 79, 449, 467, 610, 887, 995
Alw21I GWGCWC 1 cut(s) 904
Alw26I GTCTC 4 cut(s) 120, 451, 730, 1064
AlwI GGATC 3 cut(s) 197, 238, 1121
AlwNI CAGNNNCTG 1 cut(s) 800
Ama87I CYCGRG 1 cut(s) 117
Aor13HI TCCGGA 2 cut(s) 205, 230
AoxI GGCC 6 cut(s) 487, 648, 851, 1095, 1149, 1203
ApeKI GCWGC 1 cut(s) 800
ApoI RAATTY 2 cut(s) 72, 292
Asp700I GAANNNNTTC 1 cut(s) 821
AspLEI GCGC 3 cut(s) 141, 168, 605
AspS9I GGNCC 6 cut(s) 233, 277, 637, 649, 1096, 1203
AsuHPI GGTGA 1 cut(s) 35
AvaI CYCGRG 1 cut(s) 117
AvaII GGWCC 3 cut(s) 233, 277, 637
BalI TGGCCA 1 cut(s) 489
BanI GGYRCC 1 cut(s) 602
BbsI GAAGAC 2 cut(s) 545, 1082
Bbv12I GWGCWC 1 cut(s) 904
BbvI GCAGC 1 cut(s) 787
BccI CCATC 3 cut(s) 66, 1160, 1171
BcoDI GTCTC 4 cut(s) 120, 451, 730, 1064
BfaI CTAG 1 cut(s) 321
BfmI CTRYAG 3 cut(s) 690, 776, 801
BfoI RGCGCY 1 cut(s) 606
BfuAI ACCTGC 1 cut(s) 394
BisI GCNGC 3 cut(s) 506, 601, 801
BlsI GCNGC 3 cut(s) 507, 602, 802
Bme18I GGWCC 3 cut(s) 233, 277, 637
BmeT110I CYCGRG 1 cut(s) 117
BmgT120I GGNCC 6 cut(s) 233, 277, 637, 649, 1096, 1203
BmiI GGNNCC 3 cut(s) 604, 639, 651
BmsI GCATC 2 cut(s) 236, 832
BpiI GAAGAC 2 cut(s) 545, 1082
BpmI CTGGAG 1 cut(s) 546
BsaBI GATNNNNATC 1 cut(s) 175
BsaHI GRCGYC 1 cut(s) 603
BsaI GGTCTC 1 cut(s) 451
BsaJI CCNNGG 1 cut(s) 390
BsaWI WCCGGW 2 cut(s) 205, 230
Bsc4I CCNNNNNNNGG 5 cut(s) 212, 392, 512, 646, 1136
Bse118I RCCGGY 1 cut(s) 476
Bse1I ACTGG 4 cut(s) 17, 563, 794, 1015
Bse8I GATNNNNATC 1 cut(s) 175
BseAI TCCGGA 2 cut(s) 205, 230
BseDI CCNNGG 1 cut(s) 390
BseGI GGATG 3 cut(s) 99, 151, 227
BseJI GATNNNNATC 1 cut(s) 175
BseLI CCNNNNNNNGG 5 cut(s) 212, 392, 512, 646, 1136
BseMII CTCAG 1 cut(s) 549
BseNI ACTGG 4 cut(s) 17, 563, 794, 1015
BseXI GCAGC 1 cut(s) 787
BseYI CCCAGC 1 cut(s) 606
Bsh1236I CGCG 1 cut(s) 139
BshFI GGCC 6 cut(s) 489, 650, 853, 1097, 1151, 1205
BshNI GGYRCC 1 cut(s) 602
BsiHKAI GWGCWC 1 cut(s) 904
BsiHKCI CYCGRG 1 cut(s) 117
BsiSI CCGG 4 cut(s) 206, 231, 477, 1148
BslI CCNNNNNNNGG 5 cut(s) 212, 392, 512, 646, 1136
BsmAI GTCTC 4 cut(s) 120, 451, 730, 1064
BsmI GAATGC 2 cut(s) 771, 1083
BsnI GGCC 6 cut(s) 489, 650, 853, 1097, 1151, 1205
Bso31I GGTCTC 1 cut(s) 451
BsoBI CYCGRG 1 cut(s) 117
Bsp1286I GDGCHC 1 cut(s) 904
Bsp13I TCCGGA 2 cut(s) 205, 230
Bsp143I GATC 3 cut(s) 202, 243, 1126
BspACI CCGC 5 cut(s) 239, 506, 600, 641, 984
BspANI GGCC 6 cut(s) 489, 650, 853, 1097, 1151, 1205
BspCNI CTCAG 1 cut(s) 548
BspEI TCCGGA 2 cut(s) 205, 230
BspFNI CGCG 1 cut(s) 139
BspHI TCATGA 1 cut(s) 666
BspLI GGNNCC 3 cut(s) 604, 639, 651
BspMAI CTGCAG 3 cut(s) 694, 780, 805
BspMI ACCTGC 1 cut(s) 394
BspPI GGATC 3 cut(s) 197, 238, 1121
BspT107I GGYRCC 1 cut(s) 602
BspTNI GGTCTC 1 cut(s) 451
BsrFI RCCGGY 1 cut(s) 476
BsrI ACTGG 4 cut(s) 17, 563, 794, 1015
BssAI RCCGGY 1 cut(s) 476
BssECI CCNNGG 1 cut(s) 390
BssMI GATC 3 cut(s) 202, 243, 1126
BssNI GRCGYC 1 cut(s) 603
BssT1I CCWWGG 1 cut(s) 390
Bst4CI ACNGT 3 cut(s) 47, 678, 1162
BstACI GRCGYC 1 cut(s) 603
BstAPI GCANNNNNTGC 1 cut(s) 908
BstC8I GCNNGC 2 cut(s) 12, 889
BstDEI CTNAG 2 cut(s) 535, 656
BstF5I GGATG 3 cut(s) 99, 151, 227
BstFNI CGCG 1 cut(s) 139
BstH2I RGCGCY 1 cut(s) 606
BstHHI GCGC 3 cut(s) 141, 168, 605
BstKTI GATC 3 cut(s) 205, 246, 1129
BstMAI GTCTC 4 cut(s) 120, 451, 730, 1064
BstMBI GATC 3 cut(s) 202, 243, 1126
BstMWI GCNNNNNNNGC 5 cut(s) 11, 473, 859, 908, 992
BstNSI RCATGY 2 cut(s) 14, 311
BstSFI CTRYAG 3 cut(s) 690, 776, 801
BstUI CGCG 1 cut(s) 139
BstV1I GCAGC 1 cut(s) 787
BstV2I GAAGAC 2 cut(s) 545, 1082
BstX2I RGATCY 2 cut(s) 243, 1126
BstYI RGATCY 2 cut(s) 243, 1126
BsuRI GGCC 6 cut(s) 489, 650, 853, 1097, 1151, 1205
BtgZI GCGATG 1 cut(s) 855
BtsCI GGATG 3 cut(s) 99, 151, 227
BtsI GCAGTG 2 cut(s) 38, 417
BtsIMutI CAGTG 3 cut(s) 38, 417, 674
BveI ACCTGC 1 cut(s) 394
Cac8I GCNNGC 2 cut(s) 12, 889
CaiI CAGNNNCTG 1 cut(s) 800
CciI TCATGA 1 cut(s) 666
CfoI GCGC 3 cut(s) 141, 168, 605
Cfr10I RCCGGY 1 cut(s) 476
Cfr13I GGNCC 6 cut(s) 233, 277, 637, 649, 1096, 1203
Csp6I GTAC 2 cut(s) 324, 376
CviAII CATG 7 cut(s) 11, 308, 360, 667, 1015, 1168, 1195
CviQI GTAC 2 cut(s) 324, 376
DdeI CTNAG 2 cut(s) 535, 656
DinI GGCGCC 1 cut(s) 604
DpnI GATC 3 cut(s) 204, 245, 1128
DpnII GATC 3 cut(s) 202, 243, 1126
DrdI GACNNNNNNGTC 1 cut(s) 676
DseDI GACNNNNNNGTC 1 cut(s) 676
EaeI YGGCCR 3 cut(s) 487, 851, 1149
Eco130I CCWWGG 1 cut(s) 390
Eco31I GGTCTC 1 cut(s) 451
Eco47I GGWCC 3 cut(s) 233, 277, 637
Eco57I CTGAAG 1 cut(s) 302
Eco88I CYCGRG 1 cut(s) 117
EcoO109I RGGNCCY 1 cut(s) 277
EcoT14I CCWWGG 1 cut(s) 390
EcoT22I ATGCAT 1 cut(s) 229
EgeI GGCGCC 1 cut(s) 604
EheI GGCGCC 1 cut(s) 604
ErhI CCWWGG 1 cut(s) 390
FaeI CATG 7 cut(s) 14, 311, 363, 670, 1018, 1171, 1198
FalI AAGNNNNNCTT 2 cut(s) 1116, 1148
FatI CATG 7 cut(s) 10, 307, 359, 666, 1014, 1167, 1194
FauI CCCGC 1 cut(s) 648
FblI GTMKAC 1 cut(s) 680
Fnu4HI GCNGC 3 cut(s) 506, 601, 801
FokI GGATG 3 cut(s) 86, 138, 214
Fsp4HI GCNGC 3 cut(s) 506, 601, 801
FspBI CTAG 1 cut(s) 321
FspI TGCGCA 1 cut(s) 167
GlaI GCGC 3 cut(s) 140, 167, 604
GluI GCNGC 3 cut(s) 506, 601, 801
GsaI CCCAGC 1 cut(s) 610
GsuI CTGGAG 1 cut(s) 546
HaeII RGCGCY 1 cut(s) 606
HaeIII GGCC 6 cut(s) 489, 650, 853, 1097, 1151, 1205
HapII CCGG 4 cut(s) 206, 231, 477, 1148
HhaI GCGC 3 cut(s) 141, 168, 605
Hin1I GRCGYC 1 cut(s) 603
Hin1II CATG 7 cut(s) 14, 311, 363, 670, 1018, 1171, 1198
Hin6I GCGC 3 cut(s) 139, 166, 603
HinP1I GCGC 3 cut(s) 139, 166, 603
HindIII AAGCTT 1 cut(s) 447
HinfI GANTC 4 cut(s) 40, 209, 817, 923
HpaII CCGG 4 cut(s) 206, 231, 477, 1148
HphI GGTGA 1 cut(s) 35
Hpy166II GTNNAC 2 cut(s) 366, 681
Hpy188I TCNGA 5 cut(s) 39, 83, 181, 633, 731
Hpy188III TCNNGA 6 cut(s) 117, 206, 231, 280, 454, 667
Hpy8I GTNNAC 2 cut(s) 366, 681
HpyAV CCTTC 2 cut(s) 140, 360
HpyCH4III ACNGT 3 cut(s) 47, 678, 1162
HpyCH4V TGCA 9 cut(s) 10, 227, 383, 410, 692, 778, 803, 1081, 1109
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 473, 859, 908, 992
HpyF3I CTNAG 2 cut(s) 535, 656
Hsp92I GRCGYC 1 cut(s) 603
Hsp92II CATG 7 cut(s) 14, 311, 363, 670, 1018, 1171, 1198
HspAI GCGC 3 cut(s) 139, 166, 603
KasI GGCGCC 1 cut(s) 602
Kpn2I TCCGGA 2 cut(s) 205, 230
Kzo9I GATC 3 cut(s) 202, 243, 1126
LmnI GCTCC 3 cut(s) 19, 84, 899
Lsp1109I GCAGC 1 cut(s) 787
LweI GCATC 2 cut(s) 236, 832
MaeI CTAG 1 cut(s) 321
MaeIII GTNAC 4 cut(s) 310, 787, 880, 928
MalI GATC 3 cut(s) 204, 245, 1128
MboI GATC 3 cut(s) 202, 243, 1126
MboII GAAGA 4 cut(s) 196, 295, 545, 1082
MflI RGATCY 2 cut(s) 243, 1126
MhlI GDGCHC 1 cut(s) 904
MlsI TGGCCA 1 cut(s) 489
MluCI AATT 7 cut(s) 72, 220, 292, 421, 491, 576, 616
MluNI TGGCCA 1 cut(s) 489
Mly113I GGCGCC 1 cut(s) 603
MlyI GAGTC 1 cut(s) 932
MmeI TCCRAC 3 cut(s) 581, 877, 1117
MnlI CCTC 8 cut(s) 113, 165, 258, 268, 452, 663, 873, 1155
Mox20I TGGCCA 1 cut(s) 489
Mph1103I ATGCAT 1 cut(s) 229
MroI TCCGGA 2 cut(s) 205, 230
MroXI GAANNNNTTC 1 cut(s) 821
MscI TGGCCA 1 cut(s) 489
MseI TTAA 2 cut(s) 420, 915
MslI CAYNNNNRTG 1 cut(s) 665
Msp20I TGGCCA 1 cut(s) 489
MspI CCGG 4 cut(s) 206, 231, 477, 1148
Mva1269I GAATGC 2 cut(s) 771, 1083
MvnI CGCG 1 cut(s) 139
MwoI GCNNNNNNNGC 5 cut(s) 11, 473, 859, 908, 992
NarI GGCGCC 1 cut(s) 603
NdeII GATC 3 cut(s) 202, 243, 1126
NlaIII CATG 7 cut(s) 14, 311, 363, 670, 1018, 1171, 1198
NlaIV GGNNCC 3 cut(s) 604, 639, 651
NsbI TGCGCA 1 cut(s) 167
NsiI ATGCAT 1 cut(s) 229
NspI RCATGY 2 cut(s) 14, 311
PaeI GCATGC 1 cut(s) 14
PaeR7I CTCGAG 1 cut(s) 117
PagI TCATGA 1 cut(s) 666
PaqCI CACCTGC 1 cut(s) 394
PciI ACATGT 1 cut(s) 307
PctI GAATGC 2 cut(s) 771, 1083
PdmI GAANNNNTTC 1 cut(s) 821
PfeI GAWTC 3 cut(s) 40, 209, 817
PflMI CCANNNNNTGG 1 cut(s) 1136
PkrI GCNGC 3 cut(s) 507, 602, 802
PleI GAGTC 1 cut(s) 931
PluTI GGCGCC 1 cut(s) 606
PpsI GAGTC 1 cut(s) 931
PpuMI RGGWCCY 1 cut(s) 277
PscI ACATGT 1 cut(s) 307
Psp5II RGGWCCY 1 cut(s) 277
PspFI CCCAGC 1 cut(s) 606
PspN4I GGNNCC 3 cut(s) 604, 639, 651
PspPI GGNCC 6 cut(s) 233, 277, 637, 649, 1096, 1203
PspPPI RGGWCCY 1 cut(s) 277
PstI CTGCAG 3 cut(s) 694, 780, 805
PstNI CAGNNNCTG 1 cut(s) 800
PsuI RGATCY 2 cut(s) 243, 1126
RsaI GTAC 2 cut(s) 325, 377
RsaNI GTAC 2 cut(s) 324, 376
RseI CAYNNNNRTG 1 cut(s) 665
SaqAI TTAA 2 cut(s) 420, 915
SatI GCNGC 3 cut(s) 506, 601, 801
Sau3AI GATC 3 cut(s) 202, 243, 1126
Sau96I GGNCC 6 cut(s) 233, 277, 637, 649, 1096, 1203
SchI GAGTC 1 cut(s) 932
SduI GDGCHC 1 cut(s) 904
SfaNI GCATC 2 cut(s) 236, 832
SfcI CTRYAG 3 cut(s) 690, 776, 801
SfoI GGCGCC 1 cut(s) 604
Sfr274I CTCGAG 1 cut(s) 117
SinI GGWCC 3 cut(s) 233, 277, 637
SlaI CTCGAG 1 cut(s) 117
SmiMI CAYNNNNRTG 1 cut(s) 665
SmlI CTYRAG 1 cut(s) 117
SmoI CTYRAG 1 cut(s) 117
SphI GCATGC 1 cut(s) 14
Sse9I AATT 7 cut(s) 72, 220, 292, 421, 491, 576, 616
SsiI CCGC 5 cut(s) 239, 506, 600, 641, 984
SspDI GGCGCC 1 cut(s) 602
SspI AATATT 1 cut(s) 546
SspMI CTAG 1 cut(s) 321
StyI CCWWGG 1 cut(s) 390
TaaI ACNGT 3 cut(s) 47, 678, 1162
TaqI TCGA 6 cut(s) 64, 118, 143, 201, 217, 444
TasI AATT 7 cut(s) 72, 220, 292, 421, 491, 576, 616
TauI GCSGC 2 cut(s) 508, 603
TfiI GAWTC 3 cut(s) 40, 209, 817
Tru1I TTAA 2 cut(s) 420, 915
Tru9I TTAA 2 cut(s) 420, 915
TscAI CASTG 3 cut(s) 38, 417, 681
TseI GCWGC 1 cut(s) 800
TspDTI ATGAA 2 cut(s) 965, 1013
TspGWI ACGGA 2 cut(s) 650, 855
TspRI CASTG 3 cut(s) 38, 417, 681
Van91I CCANNNNNTGG 1 cut(s) 1136
VpaK11BI GGWCC 3 cut(s) 233, 277, 637
XapI RAATTY 2 cut(s) 72, 292
XceI RCATGY 2 cut(s) 14, 311
XhoI CTCGAG 1 cut(s) 117
XmiI GTMKAC 1 cut(s) 680
XmnI GAANNNNTTC 1 cut(s) 821
XspI CTAG 1 cut(s) 321
Zsp2I ATGCAT 1 cut(s) 229
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.