Rh7CG196000

sodium metabolite cotransporter

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7C
Physical Location & Seq
Forward (+)
17216244 .. 17220352
4109 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7CG196000.1

Sequence Viewer

Length: 1203 bp
ATGGCTCTGCATGCTCCTTCTACTACTCACCTCCACTTCCAGATTCCCCGTCCCCCAAACCTCCCCCGCTTCCGTCATCGCCTCCCCAGTCCGCCGCCGCCAAATCTCACTTTCCGCGTCCCTCACTCCCACTCTCTGCGTTCTCACTCGATCTCTCCAATATGCAGATGCGCATCAGTTAACTCTTCAGATTCGGATCAAAACTATGCGTCTGAATCACCTCAGATCCCTCAACGAAATAAGGTTTCTTTTGTGGAGCTCCTGAAGAAATCAAGCTCTTTTCTACCACATGTAACCATTGCCAGTACACTGTTGGCTCTTGTCTTTCCACCTTCTTTCACATGGTTTACAAACAGGTACTATGCACCTGCATTGGGTTTCTTGATGTTCGCAGTTGGGGTTAATTCCAGCGAAAAGGATTTCCTTGAAGCTTTCAAGAGACCAGCAGCTATTTTTGCTGGTTATATTGGCCAATTTGTTGTCAAGCCTCTTCTTGGATATATTTTTGGCATTATCTCAGTAGCAATATTTGGTCTTCCAACTCCAGTAGGTGCGGGGATTATGTTGGTATCTTGTGTTAGTGGCGCCCAGCTCTCAAACTATGCTACTTTTCTGACCGACCCACAAATGGCTCCTCTAAGCATTGTCATGACATCATTGTCTACTGCTACTGCTGTATTTGTCACACCATTCTTATCGCTTCTGCTCATTGGAAAGAGATTGCCTGTTGATGTAAAGGGAATGGTCTCCAGCATTCTGCAGATTGTAGTTACACCAATTGTTGCAGGCTTGCTTTTGAATAGGTTTCTTCCCCAGATATGTAATGCTATTCGGCCATTTTTGCCTCCACTATCAGTATTAGTAACAGCATGCTGTGTTGGAGCACCACTTGCCATTAACATCGAATCTGTTCTGTCTCCTTTTGGATTAACCATTTTGTTGCTCATTATCACATTTCATTTGACGGCGTTTATAGCTGGGTATTTTCTTACTGGCATGGCCTTTCATGGGGCACCTGATGTCAAACCATTACAAAGAACACTATCCTATGAGACAGGAATGCAAAGCAGTCTTCTGGCCCTTGCACTTGCTAATAGATTTTTCCAAGATCCACTAGTGGGAGTTCCTCCAGCAATTTCTACTGTGGTGATGTCTTTGATGGGTTTCTCCCTTGTCATGGTTTGGACCATAAGGAAAGAATGA

Protein Analysis

400

Amino Acids

43.36

Weight (kDa)

9.69

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
SBF PF01758 123 - 306 2.1e-46 Sodium Bile acid symporter family
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 376
AasI GACNNNNNNGTC 1 cut(s) 658
Acc16I TGCGCA 1 cut(s) 172
Acc36I ACCTGC 1 cut(s) 376
AccB1I GGYRCC 2 cut(s) 584, 1012
AccI GTMKAC 1 cut(s) 662
AccII CGCG 1 cut(s) 117
AciI CCGC 6 cut(s) 67, 92, 95, 98, 115, 554
AclWI GGATC 3 cut(s) 204, 220, 1103
AcoI YGGCCR 2 cut(s) 469, 833
AcuI CTGAAG 2 cut(s) 171, 284
AcyI GRCGYC 1 cut(s) 585
AfaI GTAC 2 cut(s) 307, 359
AfiI CCNNNNNNNGG 6 cut(s) 374, 494, 628, 1008, 1118, 1177
AflIII ACRYGT 1 cut(s) 289
AgsI TTSAA 3 cut(s) 428, 436, 799
AhlI ACTAGT 1 cut(s) 1114
AluBI AGCT 6 cut(s) 259, 276, 431, 449, 592, 977
AluI AGCT 6 cut(s) 259, 276, 431, 449, 592, 977
Alw21I GWGCWC 2 cut(s) 261, 886
Alw26I GTCTC 4 cut(s) 433, 751, 921, 1046
AlwI GGATC 3 cut(s) 204, 220, 1103
AoxI GGCC 4 cut(s) 469, 833, 999, 1077
ApeKI GCWGC 1 cut(s) 446
Asp700I GAANNNNTTC 1 cut(s) 909
AspLEI GCGC 2 cut(s) 173, 587
AspS9I GGNCC 2 cut(s) 1078, 1185
AsuHPI GGTGA 3 cut(s) 20, 210, 1159
AvaII GGWCC 1 cut(s) 1185
BaeGI GKGCMC 1 cut(s) 1015
BalI TGGCCA 1 cut(s) 471
BanI GGYRCC 2 cut(s) 584, 1012
BanII GRGCYC 1 cut(s) 261
BbsI GAAGAC 2 cut(s) 527, 1064
Bbv12I GWGCWC 2 cut(s) 261, 886
BbvI GCAGC 1 cut(s) 458
BccI CCATC 1 cut(s) 1153
BceAI ACGGC 1 cut(s) 981
BcoDI GTCTC 4 cut(s) 433, 751, 921, 1046
BcuI ACTAGT 1 cut(s) 1114
BfaI CTAG 1 cut(s) 1115
BfmI CTRYAG 1 cut(s) 758
BfoI RGCGCY 1 cut(s) 588
BfuAI ACCTGC 1 cut(s) 376
BisI GCNGC 3 cut(s) 95, 98, 447
BlsI GCNGC 3 cut(s) 96, 99, 448
Bme18I GGWCC 1 cut(s) 1185
BmgT120I GGNCC 2 cut(s) 1078, 1185
BmiI GGNNCC 3 cut(s) 586, 633, 1014
BmrI ACTGGG 1 cut(s) 81
BmsI GCATC 2 cut(s) 158, 182
BmuI ACTGGG 1 cut(s) 81
BpiI GAAGAC 2 cut(s) 527, 1064
BpmI CTGGAG 3 cut(s) 528, 733, 1113
BsaBI GATNNNNATC 2 cut(s) 172, 195
BsaHI GRCGYC 1 cut(s) 585
BsaI GGTCTC 2 cut(s) 433, 751
Bsc4I CCNNNNNNNGG 6 cut(s) 374, 494, 628, 1008, 1118, 1177
Bse1I ACTGG 4 cut(s) 87, 303, 545, 997
Bse3DI GCAATG 1 cut(s) 297
Bse8I GATNNNNATC 2 cut(s) 172, 195
BseJI GATNNNNATC 2 cut(s) 172, 195
BseLI CCNNNNNNNGG 6 cut(s) 374, 494, 628, 1008, 1118, 1177
BseMI GCAATG 1 cut(s) 297
BseMII CTCAG 2 cut(s) 236, 531
BseNI ACTGG 4 cut(s) 87, 303, 545, 997
BseRI GAGGAG 1 cut(s) 624
BseSI GKGCMC 1 cut(s) 1015
BseXI GCAGC 1 cut(s) 458
BseYI CCCAGC 2 cut(s) 588, 977
Bsh1236I CGCG 1 cut(s) 117
BshFI GGCC 4 cut(s) 471, 835, 1001, 1079
BshNI GGYRCC 2 cut(s) 584, 1012
BsiHKAI GWGCWC 2 cut(s) 261, 886
BslFI GGGAC 2 cut(s) 36, 104
BslI CCNNNNNNNGG 6 cut(s) 374, 494, 628, 1008, 1118, 1177
BsmAI GTCTC 4 cut(s) 433, 751, 921, 1046
BsmFI GGGAC 2 cut(s) 36, 104
BsmI GAATGC 2 cut(s) 753, 1065
BsnI GGCC 4 cut(s) 471, 835, 1001, 1079
Bso31I GGTCTC 2 cut(s) 433, 751
Bsp1286I GDGCHC 3 cut(s) 261, 886, 1015
Bsp143I GATC 4 cut(s) 150, 196, 225, 1108
BspACI CCGC 6 cut(s) 67, 92, 95, 98, 115, 554
BspANI GGCC 4 cut(s) 471, 835, 1001, 1079
BspCNI CTCAG 2 cut(s) 235, 530
BspFNI CGCG 1 cut(s) 117
BspHI TCATGA 1 cut(s) 648
BspLI GGNNCC 3 cut(s) 586, 633, 1014
BspMAI CTGCAG 1 cut(s) 762
BspMI ACCTGC 1 cut(s) 376
BspPI GGATC 3 cut(s) 204, 220, 1103
BspT107I GGYRCC 2 cut(s) 584, 1012
BspTNI GGTCTC 2 cut(s) 433, 751
BsrDI GCAATG 1 cut(s) 297
BsrI ACTGG 4 cut(s) 87, 303, 545, 997
BssMI GATC 4 cut(s) 150, 196, 225, 1108
BssNI GRCGYC 1 cut(s) 585
Bst4CI ACNGT 2 cut(s) 312, 1144
Bst6I CTCTTC 2 cut(s) 190, 495
BstACI GRCGYC 1 cut(s) 585
BstAPI GCANNNNNTGC 1 cut(s) 890
BstC8I GCNNGC 4 cut(s) 12, 787, 791, 871
BstDEI CTNAG 3 cut(s) 222, 517, 638
BstFNI CGCG 1 cut(s) 117
BstH2I RGCGCY 1 cut(s) 588
BstHHI GCGC 2 cut(s) 173, 587
BstKTI GATC 4 cut(s) 153, 199, 228, 1111
BstMAI GTCTC 4 cut(s) 433, 751, 921, 1046
BstMBI GATC 4 cut(s) 150, 196, 225, 1108
BstMWI GCNNNNNNNGC 5 cut(s) 11, 455, 841, 890, 974
BstNSI RCATGY 3 cut(s) 14, 293, 873
BstSFI CTRYAG 1 cut(s) 758
BstSLI GKGCMC 1 cut(s) 1015
BstUI CGCG 1 cut(s) 117
BstV1I GCAGC 1 cut(s) 458
BstV2I GAAGAC 2 cut(s) 527, 1064
BstX2I RGATCY 2 cut(s) 225, 1108
BstYI RGATCY 2 cut(s) 225, 1108
BsuRI GGCC 4 cut(s) 471, 835, 1001, 1079
BtgZI GCGATG 1 cut(s) 62
BtsIMutI CAGTG 1 cut(s) 308
BveI ACCTGC 1 cut(s) 376
Cac8I GCNNGC 4 cut(s) 12, 787, 791, 871
CciI TCATGA 1 cut(s) 648
CfoI GCGC 2 cut(s) 173, 587
Cfr13I GGNCC 2 cut(s) 1078, 1185
CseI GACGC 2 cut(s) 106, 198
Csp6I GTAC 2 cut(s) 306, 358
CviAII CATG 8 cut(s) 11, 290, 342, 649, 870, 997, 1007, 1177
CviQI GTAC 2 cut(s) 306, 358
DdeI CTNAG 3 cut(s) 222, 517, 638
DinI GGCGCC 1 cut(s) 586
DpnI GATC 4 cut(s) 152, 198, 227, 1110
DpnII GATC 4 cut(s) 150, 196, 225, 1108
DrdI GACNNNNNNGTC 1 cut(s) 658
DseDI GACNNNNNNGTC 1 cut(s) 658
EaeI YGGCCR 2 cut(s) 469, 833
Eam1104I CTCTTC 2 cut(s) 190, 495
EarI CTCTTC 2 cut(s) 190, 495
EciI GGCGGA 1 cut(s) 81
Ecl136II GAGCTC 1 cut(s) 259
Eco24I GRGCYC 1 cut(s) 261
Eco31I GGTCTC 2 cut(s) 433, 751
Eco47I GGWCC 1 cut(s) 1185
Eco53kI GAGCTC 1 cut(s) 259
Eco57I CTGAAG 2 cut(s) 171, 284
EcoICRI GAGCTC 1 cut(s) 259
EcoT38I GRGCYC 1 cut(s) 261
EgeI GGCGCC 1 cut(s) 586
EheI GGCGCC 1 cut(s) 586
FaeI CATG 8 cut(s) 14, 293, 345, 652, 873, 1000, 1010, 1180
FaqI GGGAC 2 cut(s) 36, 104
FatI CATG 8 cut(s) 10, 289, 341, 648, 869, 996, 1006, 1176
FauI CCCGC 2 cut(s) 74, 547
FblI GTMKAC 1 cut(s) 662
Fnu4HI GCNGC 3 cut(s) 95, 98, 447
FriOI GRGCYC 1 cut(s) 261
Fsp4HI GCNGC 3 cut(s) 95, 98, 447
FspAI RTGCGCAY 1 cut(s) 172
FspBI CTAG 1 cut(s) 1115
FspI TGCGCA 1 cut(s) 172
GlaI GCGC 2 cut(s) 172, 586
GluI GCNGC 3 cut(s) 95, 98, 447
GsaI CCCAGC 2 cut(s) 592, 981
GsuI CTGGAG 3 cut(s) 528, 733, 1113
HaeII RGCGCY 1 cut(s) 588
HaeIII GGCC 4 cut(s) 471, 835, 1001, 1079
HgaI GACGC 2 cut(s) 106, 198
HhaI GCGC 2 cut(s) 173, 587
Hin1I GRCGYC 1 cut(s) 585
Hin1II CATG 8 cut(s) 14, 293, 345, 652, 873, 1000, 1010, 1180
Hin6I GCGC 2 cut(s) 171, 585
HinP1I GCGC 2 cut(s) 171, 585
HincII GTYRAC 1 cut(s) 181
HindII GTYRAC 1 cut(s) 181
HindIII AAGCTT 1 cut(s) 429
HinfI GANTC 4 cut(s) 43, 191, 215, 905
HpaI GTTAAC 1 cut(s) 181
HphI GGTGA 3 cut(s) 20, 210, 1159
Hpy166II GTNNAC 4 cut(s) 181, 308, 348, 663
Hpy188I TCNGA 5 cut(s) 190, 196, 214, 225, 615
Hpy188III TCNNGA 5 cut(s) 40, 262, 382, 436, 649
Hpy8I GTNNAC 4 cut(s) 181, 308, 348, 663
HpyAV CCTTC 2 cut(s) 27, 342
HpyCH4III ACNGT 2 cut(s) 312, 1144
HpyCH4V TGCA 8 cut(s) 10, 165, 365, 371, 760, 785, 1063, 1085
HpyF10VI GCNNNNNNNGC 5 cut(s) 11, 455, 841, 890, 974
HpyF3I CTNAG 3 cut(s) 222, 517, 638
Hsp92I GRCGYC 1 cut(s) 585
Hsp92II CATG 8 cut(s) 14, 293, 345, 652, 873, 1000, 1010, 1180
HspAI GCGC 2 cut(s) 171, 585
KasI GGCGCC 1 cut(s) 584
KspAI GTTAAC 1 cut(s) 181
Kzo9I GATC 4 cut(s) 150, 196, 225, 1108
LmnI GCTCC 5 cut(s) 19, 256, 264, 637, 881
Lsp1109I GCAGC 1 cut(s) 458
LweI GCATC 2 cut(s) 158, 182
MaeI CTAG 1 cut(s) 1115
MaeIII GTNAC 4 cut(s) 292, 682, 769, 862
MalI GATC 4 cut(s) 152, 198, 227, 1110
MboI GATC 4 cut(s) 150, 196, 225, 1108
MboII GAAGA 6 cut(s) 177, 277, 482, 527, 800, 1064
MfeI CAATTG 1 cut(s) 777
MflI RGATCY 2 cut(s) 225, 1108
MhlI GDGCHC 3 cut(s) 261, 886, 1015
MlsI TGGCCA 1 cut(s) 471
MluCI AATT 4 cut(s) 403, 473, 777, 1134
MluNI TGGCCA 1 cut(s) 471
Mly113I GGCGCC 1 cut(s) 585
MmeI TCCRAC 2 cut(s) 563, 859
Mox20I TGGCCA 1 cut(s) 471
MroXI GAANNNNTTC 1 cut(s) 909
MscI TGGCCA 1 cut(s) 471
MseI TTAA 4 cut(s) 180, 402, 897, 929
MslI CAYNNNNRTG 1 cut(s) 647
Msp20I TGGCCA 1 cut(s) 471
MunI CAATTG 1 cut(s) 777
Mva1269I GAATGC 2 cut(s) 753, 1065
MvnI CGCG 1 cut(s) 117
MwoI GCNNNNNNNGC 5 cut(s) 11, 455, 841, 890, 974
NarI GGCGCC 1 cut(s) 585
NdeII GATC 4 cut(s) 150, 196, 225, 1108
NlaIII CATG 8 cut(s) 14, 293, 345, 652, 873, 1000, 1010, 1180
NlaIV GGNNCC 3 cut(s) 586, 633, 1014
NmuCI GTSAC 1 cut(s) 682
NsbI TGCGCA 1 cut(s) 172
NspI RCATGY 3 cut(s) 14, 293, 873
PaeI GCATGC 2 cut(s) 14, 873
PagI TCATGA 1 cut(s) 648
PaqCI CACCTGC 1 cut(s) 376
PciI ACATGT 1 cut(s) 289
PctI GAATGC 2 cut(s) 753, 1065
PdmI GAANNNNTTC 1 cut(s) 909
PfeI GAWTC 4 cut(s) 43, 191, 215, 905
PkrI GCNGC 3 cut(s) 96, 99, 448
PluTI GGCGCC 1 cut(s) 588
PscI ACATGT 1 cut(s) 289
Psp124BI GAGCTC 1 cut(s) 261
PspFI CCCAGC 2 cut(s) 588, 977
PspN4I GGNNCC 3 cut(s) 586, 633, 1014
PspPI GGNCC 2 cut(s) 1078, 1185
PstI CTGCAG 1 cut(s) 762
PsuI RGATCY 2 cut(s) 225, 1108
RsaI GTAC 2 cut(s) 307, 359
RsaNI GTAC 2 cut(s) 306, 358
RseI CAYNNNNRTG 1 cut(s) 647
SacI GAGCTC 1 cut(s) 261
SaqAI TTAA 4 cut(s) 180, 402, 897, 929
SatI GCNGC 3 cut(s) 95, 98, 447
Sau3AI GATC 4 cut(s) 150, 196, 225, 1108
Sau96I GGNCC 2 cut(s) 1078, 1185
SduI GDGCHC 3 cut(s) 261, 886, 1015
SfaNI GCATC 2 cut(s) 158, 182
SfcI CTRYAG 1 cut(s) 758
SfoI GGCGCC 1 cut(s) 586
SinI GGWCC 1 cut(s) 1185
SmiMI CAYNNNNRTG 1 cut(s) 647
SpeI ACTAGT 1 cut(s) 1114
SphI GCATGC 2 cut(s) 14, 873
Sse9I AATT 4 cut(s) 403, 473, 777, 1134
SsiI CCGC 6 cut(s) 67, 92, 95, 98, 115, 554
SspDI GGCGCC 1 cut(s) 584
SspI AATATT 1 cut(s) 528
SspMI CTAG 1 cut(s) 1115
SstI GAGCTC 1 cut(s) 261
TaaI ACNGT 2 cut(s) 312, 1144
TaqI TCGA 2 cut(s) 149, 903
TaqII GACCGA 1 cut(s) 632
TasI AATT 4 cut(s) 403, 473, 777, 1134
TatI WGTACW 1 cut(s) 305
TauI GCSGC 2 cut(s) 97, 100
TfiI GAWTC 4 cut(s) 43, 191, 215, 905
Tru1I TTAA 4 cut(s) 180, 402, 897, 929
Tru9I TTAA 4 cut(s) 180, 402, 897, 929
TscAI CASTG 1 cut(s) 315
TseFI GTSAC 1 cut(s) 682
TseI GCWGC 1 cut(s) 446
Tsp45I GTSAC 1 cut(s) 682
TspDTI ATGAA 2 cut(s) 947, 995
TspGWI ACGGA 1 cut(s) 62
TspRI CASTG 1 cut(s) 315
VpaK11BI GGWCC 1 cut(s) 1185
XceI RCATGY 3 cut(s) 14, 293, 873
XcmI CCANNNNNNNNNTGG 1 cut(s) 310
XmiI GTMKAC 1 cut(s) 662
XmnI GAANNNNTTC 1 cut(s) 909
XspI CTAG 1 cut(s) 1115
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.