Elicitor-responsive protein
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g01841 |
| malus_domestica | MD14G1098100.v1.1 |
| prunus_persica | Prupe.5G094600_v2.0.a1 |
| pyrus_communis | pycom14g09620 |
| rosa_chinensis | RchiOBHm_Chr7g0198691 |
| rosa_laevigata | RLG00000003845 |
| rosa_roxburghii | Rroxscaffold_3G00257500 |
| rosa_rugosa | Rorug07G0049500 Rorug07G0049600 Rorug07G0049700 Rorug07G0049800 |
| rosa_samantha | Rh7AG173200 Rh7BG176600 Rh7CG182500 Rh7DG175900 |
| rosa_wichuraiana | Rw7G015170 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 83 |
| AccII | CGCG | 1 cut(s) | 9 |
| AciI | CCGC | 4 cut(s) | 9, 228, 374, 408 |
| AfaI | GTAC | 3 cut(s) | 311, 335, 378 |
| AgsI | TTSAA | 1 cut(s) | 20 |
| AluBI | AGCT | 3 cut(s) | 165, 295, 432 |
| AluI | AGCT | 3 cut(s) | 165, 295, 432 |
| Alw21I | GWGCWC | 1 cut(s) | 122 |
| AoxI | GGCC | 1 cut(s) | 355 |
| ApeKI | GCWGC | 1 cut(s) | 429 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 383, 415 |
| AspS9I | GGNCC | 2 cut(s) | 76, 141 |
| AsuHPI | GGTGA | 2 cut(s) | 85, 352 |
| AvaII | GGWCC | 2 cut(s) | 76, 141 |
| AxyI | CCTNAGG | 1 cut(s) | 320 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 279, 311 |
| Bbv12I | GWGCWC | 1 cut(s) | 122 |
| BccI | CCATC | 1 cut(s) | 405 |
| BisI | GCNGC | 1 cut(s) | 430 |
| BlsI | GCNGC | 1 cut(s) | 431 |
| Bme18I | GGWCC | 2 cut(s) | 76, 141 |
| BmgT120I | GGNCC | 2 cut(s) | 76, 141 |
| BmiI | GGNNCC | 2 cut(s) | 78, 142 |
| BmsI | GCATC | 1 cut(s) | 186 |
| BpmI | CTGGAG | 1 cut(s) | 409 |
| BsaJI | CCNNGG | 2 cut(s) | 39, 337 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 352, 382 |
| Bse21I | CCTNAGG | 1 cut(s) | 320 |
| Bse3DI | GCAATG | 1 cut(s) | 141 |
| BseDI | CCNNGG | 2 cut(s) | 39, 337 |
| BseGI | GGATG | 2 cut(s) | 244, 416 |
| BseMI | GCAATG | 1 cut(s) | 141 |
| Bsh1236I | CGCG | 1 cut(s) | 9 |
| BshFI | GGCC | 1 cut(s) | 357 |
| BsiHKAI | GWGCWC | 1 cut(s) | 122 |
| BslFI | GGGAC | 1 cut(s) | 404 |
| BsmFI | GGGAC | 1 cut(s) | 404 |
| BsnI | GGCC | 1 cut(s) | 357 |
| Bsp1286I | GDGCHC | 1 cut(s) | 122 |
| Bsp143I | GATC | 1 cut(s) | 385 |
| Bsp19I | CCATGG | 1 cut(s) | 337 |
| BspACI | CCGC | 4 cut(s) | 9, 228, 374, 408 |
| BspANI | GGCC | 1 cut(s) | 357 |
| BspFNI | CGCG | 1 cut(s) | 9 |
| BspLI | GGNNCC | 2 cut(s) | 78, 142 |
| BsrDI | GCAATG | 1 cut(s) | 141 |
| BssECI | CCNNGG | 2 cut(s) | 39, 337 |
| BssMI | GATC | 1 cut(s) | 385 |
| BssT1I | CCWWGG | 2 cut(s) | 39, 337 |
| Bst4CI | ACNGT | 1 cut(s) | 124 |
| Bst6I | CTCTTC | 1 cut(s) | 282 |
| BstDEI | CTNAG | 1 cut(s) | 320 |
| BstDSI | CCRYGG | 1 cut(s) | 337 |
| BstF5I | GGATG | 2 cut(s) | 244, 416 |
| BstFNI | CGCG | 1 cut(s) | 9 |
| BstKTI | GATC | 1 cut(s) | 388 |
| BstMBI | GATC | 1 cut(s) | 385 |
| BstUI | CGCG | 1 cut(s) | 9 |
| Bsu36I | CCTNAGG | 1 cut(s) | 320 |
| BsuRI | GGCC | 1 cut(s) | 357 |
| BtgI | CCRYGG | 1 cut(s) | 337 |
| BtsCI | GGATG | 2 cut(s) | 244, 416 |
| BtsIMutI | CAGTG | 1 cut(s) | 266 |
| Cfr13I | GGNCC | 2 cut(s) | 76, 141 |
| Csp6I | GTAC | 3 cut(s) | 310, 334, 377 |
| CviAII | CATG | 2 cut(s) | 203, 338 |
| CviJI | RGCY | 4 cut(s) | 165, 295, 357, 432 |
| CviKI_1 | RGCY | 4 cut(s) | 165, 295, 357, 432 |
| CviQI | GTAC | 3 cut(s) | 310, 334, 377 |
| DdeI | CTNAG | 1 cut(s) | 320 |
| DpnI | GATC | 1 cut(s) | 387 |
| DpnII | GATC | 1 cut(s) | 385 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 83 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 83 |
| Eam1104I | CTCTTC | 1 cut(s) | 282 |
| EarI | CTCTTC | 1 cut(s) | 282 |
| EciI | GGCGGA | 1 cut(s) | 423 |
| Eco130I | CCWWGG | 2 cut(s) | 39, 337 |
| Eco47I | GGWCC | 2 cut(s) | 76, 141 |
| Eco81I | CCTNAGG | 1 cut(s) | 320 |
| EcoT14I | CCWWGG | 2 cut(s) | 39, 337 |
| ErhI | CCWWGG | 2 cut(s) | 39, 337 |
| FaeI | CATG | 2 cut(s) | 206, 341 |
| FaiI | YATR | 4 cut(s) | 84, 204, 339, 435 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 12, 44, 227, 259 |
| FaqI | GGGAC | 1 cut(s) | 404 |
| FatI | CATG | 2 cut(s) | 202, 337 |
| FauI | CCCGC | 1 cut(s) | 221 |
| Fnu4HI | GCNGC | 1 cut(s) | 430 |
| FokI | GGATG | 2 cut(s) | 251, 423 |
| Fsp4HI | GCNGC | 1 cut(s) | 430 |
| GluI | GCNGC | 1 cut(s) | 430 |
| GsuI | CTGGAG | 1 cut(s) | 409 |
| HaeIII | GGCC | 1 cut(s) | 357 |
| Hin1II | CATG | 2 cut(s) | 206, 341 |
| HincII | GTYRAC | 1 cut(s) | 25 |
| HindII | GTYRAC | 1 cut(s) | 25 |
| HinfI | GANTC | 1 cut(s) | 419 |
| HpaI | GTTAAC | 1 cut(s) | 25 |
| HphI | GGTGA | 2 cut(s) | 85, 352 |
| Hpy166II | GTNNAC | 2 cut(s) | 25, 379 |
| Hpy188I | TCNGA | 1 cut(s) | 184 |
| Hpy188III | TCNNGA | 3 cut(s) | 17, 149, 389 |
| Hpy8I | GTNNAC | 2 cut(s) | 25, 379 |
| HpyAV | CCTTC | 2 cut(s) | 373, 409 |
| HpyCH4III | ACNGT | 1 cut(s) | 124 |
| HpyF3I | CTNAG | 1 cut(s) | 320 |
| Hsp92II | CATG | 2 cut(s) | 206, 341 |
| KspAI | GTTAAC | 1 cut(s) | 25 |
| Kzo9I | GATC | 1 cut(s) | 385 |
| LmnI | GCTCC | 1 cut(s) | 231 |
| LpnPI | CCDG | 3 cut(s) | 109, 162, 384 |
| LweI | GCATC | 1 cut(s) | 186 |
| MalI | GATC | 1 cut(s) | 387 |
| MboI | GATC | 1 cut(s) | 385 |
| MboII | GAAGA | 1 cut(s) | 299 |
| MhlI | GDGCHC | 1 cut(s) | 122 |
| MluCI | AATT | 1 cut(s) | 254 |
| MlyI | GAGTC | 1 cut(s) | 428 |
| MnlI | CCTC | 3 cut(s) | 15, 368, 433 |
| MseI | TTAA | 4 cut(s) | 24, 48, 257, 348 |
| MspA1I | CMGCKG | 1 cut(s) | 228 |
| MvnI | CGCG | 1 cut(s) | 9 |
| NcoI | CCATGG | 1 cut(s) | 337 |
| NdeII | GATC | 1 cut(s) | 385 |
| NlaIII | CATG | 2 cut(s) | 206, 341 |
| NlaIV | GGNNCC | 2 cut(s) | 78, 142 |
| PkrI | GCNGC | 1 cut(s) | 431 |
| PleI | GAGTC | 1 cut(s) | 427 |
| PpsI | GAGTC | 1 cut(s) | 427 |
| PspN4I | GGNNCC | 2 cut(s) | 78, 142 |
| PspPI | GGNCC | 2 cut(s) | 76, 141 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 317, 349 |
| RsaI | GTAC | 3 cut(s) | 311, 335, 378 |
| RsaNI | GTAC | 3 cut(s) | 310, 334, 377 |
| SaqAI | TTAA | 4 cut(s) | 24, 48, 257, 348 |
| SatI | GCNGC | 1 cut(s) | 430 |
| Sau3AI | GATC | 1 cut(s) | 385 |
| Sau96I | GGNCC | 2 cut(s) | 76, 141 |
| SchI | GAGTC | 1 cut(s) | 428 |
| SduI | GDGCHC | 1 cut(s) | 122 |
| SetI | ASST | 6 cut(s) | 30, 98, 167, 297, 365, 434 |
| SfaNI | GCATC | 1 cut(s) | 186 |
| SinI | GGWCC | 2 cut(s) | 76, 141 |
| Sse9I | AATT | 1 cut(s) | 254 |
| SsiI | CCGC | 4 cut(s) | 9, 228, 374, 408 |
| StyI | CCWWGG | 2 cut(s) | 39, 337 |
| TaaI | ACNGT | 1 cut(s) | 124 |
| TasI | AATT | 1 cut(s) | 254 |
| TatI | WGTACW | 1 cut(s) | 309 |
| Tru1I | TTAA | 4 cut(s) | 24, 48, 257, 348 |
| Tru9I | TTAA | 4 cut(s) | 24, 48, 257, 348 |
| TscAI | CASTG | 1 cut(s) | 273 |
| TseI | GCWGC | 1 cut(s) | 429 |
| TspDTI | ATGAA | 3 cut(s) | 191, 210, 320 |
| TspRI | CASTG | 1 cut(s) | 273 |
| VpaK11BI | GGWCC | 2 cut(s) | 76, 141 |