Protein of unknown function (DUF3741)
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 |
| malus_domestica | MD06G1085000.v1.1 MD14G1105800.v1.1 |
| prunus_persica | Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1 |
| pyrus_communis | pycom06g08110 pycom14g10130 |
| rosa_chinensis | RchiOBHm_Chr7g0197501 |
| rosa_laevigata | RLG00000003935 RLG00000019391 |
| rosa_multiflora | Rmu_sc0002167.1_g000007 Rmu_sc0002395.1_g000015 |
| rosa_roxburghii | Rroxscaffold_3G00258410 |
| rosa_rugosa | Rorug07G0040200 Rorug07G0040200 |
| rosa_samantha | Rh4CG285900 Rh7AG165300 Rh7BG167400 Rh7CG173800 Rh7DG166700 |
| rosa_wichuraiana | Rw7G014410 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 1099 |
| Acc36I | ACCTGC | 2 cut(s) | 1099, 2353 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 256 |
| AccII | CGCG | 1 cut(s) | 1359 |
| AciI | CCGC | 3 cut(s) | 347, 588, 1969 |
| AclWI | GGATC | 3 cut(s) | 453, 2166, 2510 |
| AcoI | YGGCCR | 1 cut(s) | 2442 |
| AcsI | RAATTY | 9 cut(s) | 202, 404, 686, 738, 745, 787, 1026, 1857, 1937 |
| AcuI | CTGAAG | 3 cut(s) | 927, 1017, 2370 |
| AfaI | GTAC | 7 cut(s) | 92, 564, 651, 1183, 2147, 2292, 2435 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 256, 958, 2608 |
| AflII | CTTAAG | 1 cut(s) | 320 |
| AflIII | ACRYGT | 3 cut(s) | 927, 1574, 2142 |
| AhlI | ACTAGT | 1 cut(s) | 1895 |
| AjnI | CCWGG | 2 cut(s) | 1006, 1972 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1335, 1367, 2269, 2301, 2369, 2401 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 1589, 1621 |
| Alw21I | GWGCWC | 3 cut(s) | 2129, 2358, 2481 |
| Alw26I | GTCTC | 7 cut(s) | 89, 816, 960, 1077, 1123, 2033, 2804 |
| AlwI | GGATC | 3 cut(s) | 453, 2166, 2510 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 2288, 2774 |
| Ama87I | CYCGRG | 1 cut(s) | 1421 |
| AoxI | GGCC | 6 cut(s) | 121, 247, 669, 1009, 1728, 2442 |
| ApeKI | GCWGC | 7 cut(s) | 533, 662, 1159, 1364, 2449, 2545, 2743 |
| ApoI | RAATTY | 9 cut(s) | 202, 404, 686, 738, 745, 787, 1026, 1857, 1937 |
| AseI | ATTAAT | 1 cut(s) | 636 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1255 |
| AspLEI | GCGC | 1 cut(s) | 1931 |
| AspS9I | GGNCC | 4 cut(s) | 247, 911, 1010, 1729 |
| AsuC2I | CCSGG | 1 cut(s) | 858 |
| AsuHPI | GGTGA | 9 cut(s) | 712, 872, 980, 1251, 1342, 1623, 2187, 2576, 2721 |
| AsuII | TTCGAA | 2 cut(s) | 749, 766 |
| AvaI | CYCGRG | 1 cut(s) | 1421 |
| AvaII | GGWCC | 1 cut(s) | 911 |
| BanII | GRGCYC | 2 cut(s) | 2129, 2481 |
| BbsI | GAAGAC | 4 cut(s) | 336, 819, 1284, 2030 |
| Bbv12I | GWGCWC | 3 cut(s) | 2129, 2358, 2481 |
| BbvCI | CCTCAGC | 1 cut(s) | 666 |
| BbvI | GCAGC | 7 cut(s) | 545, 674, 1171, 1351, 2436, 2557, 2755 |
| BceAI | ACGGC | 3 cut(s) | 1095, 1796, 2429 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 567, 601 |
| BciT130I | CCWGG | 2 cut(s) | 1008, 1974 |
| BclI | TGATCA | 3 cut(s) | 1756, 2119, 2850 |
| BcnI | CCSGG | 1 cut(s) | 858 |
| BcoDI | GTCTC | 7 cut(s) | 89, 816, 960, 1077, 1123, 2033, 2804 |
| BcuI | ACTAGT | 1 cut(s) | 1895 |
| BfaI | CTAG | 5 cut(s) | 441, 552, 797, 1896, 2096 |
| BfmI | CTRYAG | 2 cut(s) | 1092, 1636 |
| BfrI | CTTAAG | 1 cut(s) | 320 |
| BfuAI | ACCTGC | 2 cut(s) | 1099, 2353 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1845 |
| BisI | GCNGC | 8 cut(s) | 347, 534, 663, 1160, 1365, 2450, 2546, 2744 |
| BlpI | GCTNAGC | 1 cut(s) | 471 |
| BlsI | GCNGC | 8 cut(s) | 348, 535, 664, 1161, 1366, 2451, 2547, 2745 |
| Bme1390I | CCNGG | 3 cut(s) | 858, 1008, 1974 |
| Bme18I | GGWCC | 1 cut(s) | 911 |
| BmeT110I | CYCGRG | 1 cut(s) | 1421 |
| BmgT120I | GGNCC | 4 cut(s) | 247, 911, 1010, 1729 |
| BmiI | GGNNCC | 2 cut(s) | 1607, 2391 |
| BmrFI | CCNGG | 3 cut(s) | 858, 1008, 1974 |
| BmrI | ACTGGG | 1 cut(s) | 1603 |
| BmsI | GCATC | 8 cut(s) | 484, 575, 718, 1376, 2262, 2302, 2521, 2731 |
| BmuI | ACTGGG | 1 cut(s) | 1603 |
| BpiI | GAAGAC | 4 cut(s) | 336, 819, 1284, 2030 |
| BplI | GAGNNNNNCTC | 6 cut(s) | 838, 870, 1148, 1180, 2345, 2377 |
| Bpu10I | CCTNAGC | 1 cut(s) | 666 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 471 |
| Bpu14I | TTCGAA | 2 cut(s) | 749, 766 |
| BpuEI | CTTGAG | 3 cut(s) | 1084, 1687, 2315 |
| BpuMI | CCSGG | 1 cut(s) | 858 |
| Bsa29I | ATCGAT | 1 cut(s) | 1176 |
| BsaAI | YACGTR | 1 cut(s) | 2437 |
| BsaJI | CCNNGG | 5 cut(s) | 1885, 1972, 2059, 2560, 2639 |
| BsaWI | WCCGGW | 2 cut(s) | 1582, 2197 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 256, 958, 2608 |
| Bse1I | ACTGG | 8 cut(s) | 17, 195, 647, 709, 918, 1374, 1598, 2282 |
| BseBI | CCWGG | 2 cut(s) | 1008, 1974 |
| BseCI | ATCGAT | 1 cut(s) | 1176 |
| BseDI | CCNNGG | 5 cut(s) | 1885, 1972, 2059, 2560, 2639 |
| BseGI | GGATG | 6 cut(s) | 199, 265, 590, 2206, 2498, 2722 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 256, 958, 2608 |
| BseNI | ACTGG | 8 cut(s) | 17, 195, 647, 709, 918, 1374, 1598, 2282 |
| BseRI | GAGGAG | 4 cut(s) | 1293, 2171, 2567, 2822 |
| BseXI | GCAGC | 7 cut(s) | 545, 674, 1171, 1351, 2436, 2557, 2755 |
| BseYI | CCCAGC | 3 cut(s) | 1012, 1454, 1822 |
| Bsh1236I | CGCG | 1 cut(s) | 1359 |
| Bsh1285I | CGRYCG | 1 cut(s) | 2506 |
| BshFI | GGCC | 6 cut(s) | 123, 249, 671, 1011, 1730, 2444 |
| BshVI | ATCGAT | 1 cut(s) | 1176 |
| BsiEI | CGRYCG | 1 cut(s) | 2506 |
| BsiHKAI | GWGCWC | 3 cut(s) | 2129, 2358, 2481 |
| BsiHKCI | CYCGRG | 1 cut(s) | 1421 |
| BsiSI | CCGG | 3 cut(s) | 858, 1583, 2198 |
| BslFI | GGGAC | 2 cut(s) | 1604, 2365 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 256, 958, 2608 |
| BsmAI | GTCTC | 7 cut(s) | 89, 816, 960, 1077, 1123, 2033, 2804 |
| BsmBI | CGTCTC | 1 cut(s) | 960 |
| BsmFI | GGGAC | 2 cut(s) | 1604, 2365 |
| BsmI | GAATGC | 2 cut(s) | 664, 2074 |
| BsnI | GGCC | 6 cut(s) | 123, 249, 671, 1011, 1730, 2444 |
| BsoBI | CYCGRG | 1 cut(s) | 1421 |
| Bsp119I | TTCGAA | 2 cut(s) | 749, 766 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2129, 2358, 2481 |
| Bsp143I | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 471 |
| Bsp19I | CCATGG | 2 cut(s) | 1885, 2560 |
| BspACI | CCGC | 3 cut(s) | 347, 588, 1969 |
| BspANI | GGCC | 6 cut(s) | 123, 249, 671, 1011, 1730, 2444 |
| BspDI | ATCGAT | 1 cut(s) | 1176 |
| BspFNI | CGCG | 1 cut(s) | 1359 |
| BspHI | TCATGA | 1 cut(s) | 2701 |
| BspLI | GGNNCC | 2 cut(s) | 1607, 2391 |
| BspMAI | CTGCAG | 1 cut(s) | 1096 |
| BspMI | ACCTGC | 2 cut(s) | 1099, 2353 |
| BspPI | GGATC | 3 cut(s) | 453, 2166, 2510 |
| BspQI | GCTCTTC | 4 cut(s) | 1493, 2346, 2373, 2469 |
| BspT104I | TTCGAA | 2 cut(s) | 749, 766 |
| BspTI | CTTAAG | 1 cut(s) | 320 |
| BsrI | ACTGG | 8 cut(s) | 17, 195, 647, 709, 918, 1374, 1598, 2282 |
| BssECI | CCNNGG | 5 cut(s) | 1885, 1972, 2059, 2560, 2639 |
| BssMI | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| BssT1I | CCWWGG | 4 cut(s) | 1885, 2059, 2560, 2639 |
| Bst2UI | CCWGG | 2 cut(s) | 1008, 1974 |
| Bst4CI | ACNGT | 5 cut(s) | 289, 610, 2588, 2695, 2815 |
| Bst6I | CTCTTC | 8 cut(s) | 131, 152, 1493, 2148, 2346, 2373, 2407, 2469 |
| BstAFI | CTTAAG | 1 cut(s) | 320 |
| BstBAI | YACGTR | 1 cut(s) | 2437 |
| BstBI | TTCGAA | 2 cut(s) | 749, 766 |
| BstC8I | GCNNGC | 5 cut(s) | 1018, 1518, 1696, 2329, 2454 |
| BstDSI | CCRYGG | 2 cut(s) | 1885, 2560 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 2606 |
| BstF5I | GGATG | 6 cut(s) | 199, 265, 590, 2206, 2498, 2722 |
| BstFNI | CGCG | 1 cut(s) | 1359 |
| BstHHI | GCGC | 1 cut(s) | 1931 |
| BstKTI | GATC | 8 cut(s) | 461, 1245, 1759, 2122, 2174, 2506, 2518, 2853 |
| BstMAI | GTCTC | 7 cut(s) | 89, 816, 960, 1077, 1123, 2033, 2804 |
| BstMBI | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| BstMCI | CGRYCG | 1 cut(s) | 2506 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 223, 622, 652, 668, 1017, 1845 |
| BstNI | CCWGG | 2 cut(s) | 1008, 1974 |
| BstNSI | RCATGY | 3 cut(s) | 1136, 1578, 2146 |
| BstSCI | CCNGG | 3 cut(s) | 856, 1006, 1972 |
| BstSFI | CTRYAG | 2 cut(s) | 1092, 1636 |
| BstUI | CGCG | 1 cut(s) | 1359 |
| BstV1I | GCAGC | 7 cut(s) | 545, 674, 1171, 1351, 2436, 2557, 2755 |
| BstV2I | GAAGAC | 4 cut(s) | 336, 819, 1284, 2030 |
| BstX2I | RGATCY | 2 cut(s) | 458, 2171 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2561 |
| BstYI | RGATCY | 2 cut(s) | 458, 2171 |
| Bsu15I | ATCGAT | 1 cut(s) | 1176 |
| BsuRI | GGCC | 6 cut(s) | 123, 249, 671, 1011, 1730, 2444 |
| BsuTUI | ATCGAT | 1 cut(s) | 1176 |
| BtgI | CCRYGG | 2 cut(s) | 1885, 2560 |
| BtsCI | GGATG | 6 cut(s) | 199, 265, 590, 2206, 2498, 2722 |
| BtsI | GCAGTG | 1 cut(s) | 536 |
| BtsIMutI | CAGTG | 3 cut(s) | 339, 536, 1381 |
| BveI | ACCTGC | 2 cut(s) | 1099, 2353 |
| Cac8I | GCNNGC | 5 cut(s) | 1018, 1518, 1696, 2329, 2454 |
| CaiI | CAGNNNCTG | 2 cut(s) | 2288, 2774 |
| CciI | TCATGA | 1 cut(s) | 2701 |
| CfoI | GCGC | 1 cut(s) | 1931 |
| Cfr13I | GGNCC | 4 cut(s) | 247, 911, 1010, 1729 |
| ClaI | ATCGAT | 1 cut(s) | 1176 |
| CseI | GACGC | 1 cut(s) | 1365 |
| Csp6I | GTAC | 7 cut(s) | 91, 563, 650, 1182, 2146, 2291, 2434 |
| CviQI | GTAC | 7 cut(s) | 91, 563, 650, 1182, 2146, 2291, 2434 |
| DpnI | GATC | 8 cut(s) | 460, 1244, 1758, 2121, 2173, 2505, 2517, 2852 |
| DpnII | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| DraI | TTTAAA | 1 cut(s) | 1002 |
| EaeI | YGGCCR | 1 cut(s) | 2442 |
| Eam1104I | CTCTTC | 8 cut(s) | 131, 152, 1493, 2148, 2346, 2373, 2407, 2469 |
| EarI | CTCTTC | 8 cut(s) | 131, 152, 1493, 2148, 2346, 2373, 2407, 2469 |
| EciI | GGCGGA | 1 cut(s) | 1958 |
| Ecl136II | GAGCTC | 2 cut(s) | 2127, 2479 |
| Eco130I | CCWWGG | 4 cut(s) | 1885, 2059, 2560, 2639 |
| Eco24I | GRGCYC | 2 cut(s) | 2129, 2481 |
| Eco32I | GATATC | 2 cut(s) | 1303, 2791 |
| Eco47I | GGWCC | 1 cut(s) | 911 |
| Eco53kI | GAGCTC | 2 cut(s) | 2127, 2479 |
| Eco57I | CTGAAG | 3 cut(s) | 927, 1017, 2370 |
| Eco88I | CYCGRG | 1 cut(s) | 1421 |
| EcoICRI | GAGCTC | 2 cut(s) | 2127, 2479 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 2606 |
| EcoO109I | RGGNCCY | 2 cut(s) | 911, 1729 |
| EcoRI | GAATTC | 1 cut(s) | 745 |
| EcoRII | CCWGG | 2 cut(s) | 1006, 1972 |
| EcoRV | GATATC | 2 cut(s) | 1303, 2791 |
| EcoT14I | CCWWGG | 4 cut(s) | 1885, 2059, 2560, 2639 |
| EcoT22I | ATGCAT | 1 cut(s) | 733 |
| EcoT38I | GRGCYC | 2 cut(s) | 2129, 2481 |
| ErhI | CCWWGG | 4 cut(s) | 1885, 2059, 2560, 2639 |
| Esp3I | CGTCTC | 1 cut(s) | 960 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 1490, 1522 |
| FaqI | GGGAC | 2 cut(s) | 1604, 2365 |
| FbaI | TGATCA | 3 cut(s) | 1756, 2119, 2850 |
| Fnu4HI | GCNGC | 8 cut(s) | 347, 534, 663, 1160, 1365, 2450, 2546, 2744 |
| FokI | GGATG | 6 cut(s) | 206, 272, 597, 2213, 2485, 2709 |
| FriOI | GRGCYC | 2 cut(s) | 2129, 2481 |
| Fsp4HI | GCNGC | 8 cut(s) | 347, 534, 663, 1160, 1365, 2450, 2546, 2744 |
| FspBI | CTAG | 5 cut(s) | 441, 552, 797, 1896, 2096 |
| GlaI | GCGC | 1 cut(s) | 1930 |
| GluI | GCNGC | 8 cut(s) | 347, 534, 663, 1160, 1365, 2450, 2546, 2744 |
| GsaI | CCCAGC | 3 cut(s) | 1016, 1458, 1826 |
| HaeIII | GGCC | 6 cut(s) | 123, 249, 671, 1011, 1730, 2444 |
| HapII | CCGG | 3 cut(s) | 858, 1583, 2198 |
| HgaI | GACGC | 1 cut(s) | 1365 |
| HhaI | GCGC | 1 cut(s) | 1931 |
| Hin6I | GCGC | 1 cut(s) | 1929 |
| HinP1I | GCGC | 1 cut(s) | 1929 |
| HindIII | AAGCTT | 4 cut(s) | 215, 317, 1060, 2454 |
| HpaII | CCGG | 3 cut(s) | 858, 1583, 2198 |
| HphI | GGTGA | 9 cut(s) | 712, 872, 980, 1251, 1342, 1623, 2187, 2576, 2721 |
| Hpy166II | GTNNAC | 3 cut(s) | 339, 703, 1184 |
| Hpy8I | GTNNAC | 3 cut(s) | 339, 703, 1184 |
| Hpy99I | CGWCG | 1 cut(s) | 582 |
| HpyAV | CCTTC | 7 cut(s) | 238, 371, 902, 924, 1923, 2229, 2837 |
| HpyCH4III | ACNGT | 5 cut(s) | 289, 610, 2588, 2695, 2815 |
| HpyCH4IV | ACGT | 3 cut(s) | 929, 1722, 2436 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 223, 622, 652, 668, 1017, 1845 |
| HpySE526I | ACGT | 3 cut(s) | 929, 1722, 2436 |
| HspAI | GCGC | 1 cut(s) | 1929 |
| Ksp22I | TGATCA | 3 cut(s) | 1756, 2119, 2850 |
| Kzo9I | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| LguI | GCTCTTC | 4 cut(s) | 1493, 2346, 2373, 2469 |
| LmnI | GCTCC | 1 cut(s) | 2580 |
| Lsp1109I | GCAGC | 7 cut(s) | 545, 674, 1171, 1351, 2436, 2557, 2755 |
| LweI | GCATC | 8 cut(s) | 484, 575, 718, 1376, 2262, 2302, 2521, 2731 |
| MaeI | CTAG | 5 cut(s) | 441, 552, 797, 1896, 2096 |
| MaeII | ACGT | 3 cut(s) | 929, 1722, 2436 |
| MaeIII | GTNAC | 1 cut(s) | 1282 |
| MalI | GATC | 8 cut(s) | 460, 1244, 1758, 2121, 2173, 2505, 2517, 2852 |
| MboI | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| MfeI | CAATTG | 2 cut(s) | 1642, 1760 |
| MflI | RGATCY | 2 cut(s) | 458, 2171 |
| MhlI | GDGCHC | 3 cut(s) | 2129, 2358, 2481 |
| MlyI | GAGTC | 3 cut(s) | 818, 980, 2780 |
| Mph1103I | ATGCAT | 1 cut(s) | 733 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1255 |
| MslI | CAYNNNNRTG | 2 cut(s) | 117, 1817 |
| MspA1I | CMGCKG | 2 cut(s) | 655, 665 |
| MspCI | CTTAAG | 1 cut(s) | 320 |
| MspI | CCGG | 3 cut(s) | 858, 1583, 2198 |
| MspR9I | CCNGG | 3 cut(s) | 858, 1008, 1974 |
| MunI | CAATTG | 2 cut(s) | 1642, 1760 |
| Mva1269I | GAATGC | 2 cut(s) | 664, 2074 |
| MvaI | CCWGG | 2 cut(s) | 1008, 1974 |
| MvnI | CGCG | 1 cut(s) | 1359 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 223, 622, 652, 668, 1017, 1845 |
| NciI | CCSGG | 1 cut(s) | 858 |
| NcoI | CCATGG | 2 cut(s) | 1885, 2560 |
| NdeII | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| NlaIV | GGNNCC | 2 cut(s) | 1607, 2391 |
| NmuCI | GTSAC | 1 cut(s) | 1282 |
| NsiI | ATGCAT | 1 cut(s) | 733 |
| NspI | RCATGY | 3 cut(s) | 1136, 1578, 2146 |
| NspV | TTCGAA | 2 cut(s) | 749, 766 |
| PagI | TCATGA | 1 cut(s) | 2701 |
| PaqCI | CACCTGC | 1 cut(s) | 1099 |
| PciI | ACATGT | 2 cut(s) | 1574, 2142 |
| PciSI | GCTCTTC | 4 cut(s) | 1493, 2346, 2373, 2469 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 2442 |
| PctI | GAATGC | 2 cut(s) | 664, 2074 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1255 |
| PfeI | GAWTC | 7 cut(s) | 293, 1097, 1343, 1433, 1919, 2243, 2698 |
| PflFI | GACNNNGTC | 1 cut(s) | 1288 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 256 |
| PkrI | GCNGC | 8 cut(s) | 348, 535, 664, 1161, 1366, 2451, 2547, 2745 |
| Ple19I | CGATCG | 1 cut(s) | 2506 |
| PleI | GAGTC | 3 cut(s) | 818, 979, 2779 |
| PpsI | GAGTC | 3 cut(s) | 818, 979, 2779 |
| Ppu21I | YACGTR | 1 cut(s) | 2437 |
| PpuMI | RGGWCCY | 1 cut(s) | 911 |
| PscI | ACATGT | 2 cut(s) | 1574, 2142 |
| PshBI | ATTAAT | 1 cut(s) | 636 |
| Psp124BI | GAGCTC | 2 cut(s) | 2129, 2481 |
| Psp5II | RGGWCCY | 1 cut(s) | 911 |
| Psp6I | CCWGG | 2 cut(s) | 1006, 1972 |
| PspFI | CCCAGC | 3 cut(s) | 1012, 1454, 1822 |
| PspGI | CCWGG | 2 cut(s) | 1006, 1972 |
| PspN4I | GGNNCC | 2 cut(s) | 1607, 2391 |
| PspPI | GGNCC | 4 cut(s) | 247, 911, 1010, 1729 |
| PspPPI | RGGWCCY | 1 cut(s) | 911 |
| PstI | CTGCAG | 1 cut(s) | 1096 |
| PstNI | CAGNNNCTG | 2 cut(s) | 2288, 2774 |
| PsuI | RGATCY | 2 cut(s) | 458, 2171 |
| PsyI | GACNNNGTC | 1 cut(s) | 1288 |
| PvuI | CGATCG | 1 cut(s) | 2506 |
| PvuII | CAGCTG | 2 cut(s) | 655, 665 |
| RsaI | GTAC | 7 cut(s) | 92, 564, 651, 1183, 2147, 2292, 2435 |
| RsaNI | GTAC | 7 cut(s) | 91, 563, 650, 1182, 2146, 2291, 2434 |
| RseI | CAYNNNNRTG | 2 cut(s) | 117, 1817 |
| SacI | GAGCTC | 2 cut(s) | 2129, 2481 |
| SapI | GCTCTTC | 4 cut(s) | 1493, 2346, 2373, 2469 |
| SatI | GCNGC | 8 cut(s) | 347, 534, 663, 1160, 1365, 2450, 2546, 2744 |
| Sau3AI | GATC | 8 cut(s) | 458, 1242, 1756, 2119, 2171, 2503, 2515, 2850 |
| Sau96I | GGNCC | 4 cut(s) | 247, 911, 1010, 1729 |
| SchI | GAGTC | 3 cut(s) | 818, 980, 2780 |
| ScrFI | CCNGG | 3 cut(s) | 858, 1008, 1974 |
| SduI | GDGCHC | 3 cut(s) | 2129, 2358, 2481 |
| SfaNI | GCATC | 8 cut(s) | 484, 575, 718, 1376, 2262, 2302, 2521, 2731 |
| SfcI | CTRYAG | 2 cut(s) | 1092, 1636 |
| SfuI | TTCGAA | 2 cut(s) | 749, 766 |
| SinI | GGWCC | 1 cut(s) | 911 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 117, 1817 |
| SmlI | CTYRAG | 4 cut(s) | 320, 1063, 1702, 2294 |
| SmoI | CTYRAG | 4 cut(s) | 320, 1063, 1702, 2294 |
| SpeI | ACTAGT | 1 cut(s) | 1895 |
| SsiI | CCGC | 3 cut(s) | 347, 588, 1969 |
| SspMI | CTAG | 5 cut(s) | 441, 552, 797, 1896, 2096 |
| SstI | GAGCTC | 2 cut(s) | 2129, 2481 |
| StyD4I | CCNGG | 3 cut(s) | 856, 1006, 1972 |
| StyI | CCWWGG | 4 cut(s) | 1885, 2059, 2560, 2639 |
| TaaI | ACNGT | 5 cut(s) | 289, 610, 2588, 2695, 2815 |
| TaiI | ACGT | 3 cut(s) | 932, 1725, 2439 |
| TatI | WGTACW | 2 cut(s) | 649, 2290 |
| TauI | GCSGC | 1 cut(s) | 349 |
| TfiI | GAWTC | 7 cut(s) | 293, 1097, 1343, 1433, 1919, 2243, 2698 |
| TscAI | CASTG | 3 cut(s) | 346, 543, 1381 |
| TseFI | GTSAC | 1 cut(s) | 1282 |
| TseI | GCWGC | 7 cut(s) | 533, 662, 1159, 1364, 2449, 2545, 2743 |
| Tsp45I | GTSAC | 1 cut(s) | 1282 |
| TspGWI | ACGGA | 2 cut(s) | 125, 2033 |
| TspRI | CASTG | 3 cut(s) | 346, 543, 1381 |
| Tth111I | GACNNNGTC | 1 cut(s) | 1288 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 256 |
| Vha464I | CTTAAG | 1 cut(s) | 320 |
| VpaK11BI | GGWCC | 1 cut(s) | 911 |
| VspI | ATTAAT | 1 cut(s) | 636 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 2606 |
| XapI | RAATTY | 9 cut(s) | 202, 404, 686, 738, 745, 787, 1026, 1857, 1937 |
| XceI | RCATGY | 3 cut(s) | 1136, 1578, 2146 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2637 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1255 |
| XspI | CTAG | 5 cut(s) | 441, 552, 797, 1896, 2096 |
| Zsp2I | ATGCAT | 1 cut(s) | 733 |