Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0006931

Physical Location & Seq

Genomic Coordinates Forward (+)

14934118 .. 14941888

Gene Structure 7771 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG166700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2430 bp

ATGGATGACGAAATGACGAACAGAACTCAAACAGTTGATTCTGGTATGGCAAGTAAAAGAAAGCATAAGGGGGAAAAGTTATCCACTGAGCTGCAGATGAATAAGAAAATTGATTCTGATGAATTGAAACATATGCAATCCAATTCAAAACTTGCTTGTCAGTTACCTAAGAAGAAAGGAAAGGCTAGCAAAACTAGTCAGATATCTCATCCTCTTTCACCTCAGGGTCTGAAATGTGAAGCTAAGAATGGGAAACCTTCTTATTCAGTTTCAGTAGAAACATCTTCAAACAAGCTCAACTCGGCAGCATTGGCAAAAGAGGTGCGTGGAAAAAAGAGAAGAGGATTTGGTTGTAAAAGTATTAATTATGAGATTACTCTTCCACAAGTACAGAAGAATGCAGCTGAGGCCATCATAAATCAGAAATTCATTGATGAAAAGTACATCAGGACAGATGGGGTGAACCACCAGTCTAGACAATTATCAGATGCATTAGAGATTTTGAATTCTAATAAAGAATTATTCATAAAGCTCCTACAAGACCCAAATTCTCTTCTAGCAAAACATATTGAAGACCTCAGAGAATCTCAGGCAGTAAAACATCAGATTAAATCTCCCTCTGACATCAATGTTTCAGAACCAAGGCGATGTGGTGGTCCTGCTGGTAATCAGAAGTCGAAATCCTGTGATACCTACTCTTCTGAGGAAAGTGATGATTCCCATTTTTCAGACAGAATAGTAGTTTTGAAACCCGGCCCAAGTAGCATGCAAAGTGCTGAAGACAATATTAAGTGTTCCTCTCTGCAATCTTATTACAGCTTGAGAAATAACGGGCAGAGTGAAATGCCTGCGAATATTTCTTTTAGTCAGATAAAGAAGAAGTTGAGACATGCTATAGGGGTAAGAAGAAAAGAGCAACACTCTAAGTCAATGGATGGTACATTACATGGATCTCCCTATGAAGGCTCAAAAGAGGATTGTAAAGGAAAAGGTGTGGAGATCATTAGAAGAAATTCACCTGGTGGAGGAATGATGATGTCTTCTCTTGATGTAAAGAAAAGAGACAACATGAGCGAGGGGAGAGAATGTGAATCACAAATTCAGTGTGAAACTGCATCAACCAGTGGAAGTGGTCTTGGGAACTTAAACATTTCAGTTGTTTGCCATCCTAGGCTAAAGGAGTCTGAAAGTTCTTTGGAGGCTAGATTGTTGGAATTGTTAAACAGTGGAAACAAGGACAAAAACCACAAAAAGCAGGAACTGAAAACCCTGGAAAGGGTGATATCATTTCCTGAGCACGACTTCTTGCCTACACGCAGTCCTGTAGGACTTTCACCCAACAGCAACTGCCAACTGTTATATGAGAACAAATGGAGGCTTCAGAAAGAAAAAACCAGCTGCTCAAGTCCTACAGAGAATAATCGCACCATGCACCAAGGAGAAATCAATTCTTTAAAACAGCCCTCTGAATCAGAAAGTGCTTGCAGAAATGGTACTGTGGAAACTAAAGATACTGTCCACCCAGGAGAAAATAGTTCTTTGGGAGCTCTAAGAAGATCCAATTGCATGGAGAAGACCAGTACCACAGAAACTAGTGATACTGTATACCAAGGAGAAACTGATCCTGCAGAGACACAGTCTGAACTAAATTGCAAAGACAAGGCTCTTGATTGGAGTACAGATAAAGCTGACTTGTACGAGGAAGATGAATATATTAGGACCTCCAGACAGGAGCAGCCATCAACATCTTCACCTGATGTTTTCCAGTCACCTCCAAGAATTCAGAGAGGGGAAGATTCTGCTAGCATCGAAGATAAAGGAGAGCACCCAAGTCCGGTATCTGTACTTGAGCAGTTTTTTGTAGATACCATATCTGAACCTGCTGAAGAGCACCATTCTGCTCGTCATGTGAGGTCCCCTATCCGCACTGACAGTAGCAGTACCTCTTCTTTGAATGAACATGAATTGATCTCCGAGTATATTCAGGCAGTGCTGCGAGCTGCAAGCTTAGATTGGGATGAAATCTCAATGATGTGCGACTCAACAGACCAACTGCTTGACCCGTTCTTGTTTGACACAGTAAAGCTGCAGGCAAACCAACTCCAAGGTGATTGCATGCTCTTCTTTGACTGTATAGATGAAGTCCTTGTCGAAGTATACCACAGTGACCTTCGATATTCCCCTTGGCTGTCATTTATCAAGCCAAATGTTCGACAACTTCCGATTGAGAAAACTGTGATTCATAAGGTGATGAAGTATGTTGACTGGTACCTCTCACTTCATCCGTCACCCCGGACATTGCAGCAGGTTGTTCAGATGGATATAGCACGATCTGGAACATGGATAGATATCCGGAAGGATGCTGAGGATGTCGTTTTTCAGATGGTAGAAGATGTTTTAGAAGAATTGATAATAGAAACCATAATTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

809

Amino Acids

90.87

Weight (kDa)

5.93

Isoelectric Point (pI)

60.72

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
DUF3741	PF12552	140 - 184	3.4e-19	Protein of unknown function (DUF3741)
DUF4378	PF14309	659 - 806	3.4e-23	Domain of unknown function (DUF4378)

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0006931)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600
malus_domestica	MD06G1085000.v1.1 MD14G1105800.v1.1
prunus_persica	Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1
pyrus_communis	pycom06g08110 pycom14g10130
rosa_chinensis	RchiOBHm_Chr7g0197501
rosa_laevigata	RLG00000003935 RLG00000019391
rosa_multiflora	Rmu_sc0002167.1_g000007 Rmu_sc0002395.1_g000015
rosa_roxburghii	Rroxscaffold_3G00258410
rosa_rugosa	Rorug07G0040200 Rorug07G0040200
rosa_samantha	Rh4CG285900 Rh7AG165300 Rh7BG167400 Rh7CG173800 Rh7DG166700
rosa_wichuraiana	Rw7G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	1888, 2296
Acc65I	GGTACC	1 cut(s)	2268
AccB1I	GGYRCC	1 cut(s)	2268
AccI	GTMKAC	2 cut(s)	1605, 2157
AccIII	TCCGGA	1 cut(s)	2352
AciI	CCGC	1 cut(s)	1924
AclWI	GGATC	3 cut(s)	958, 1551, 1616
AcsI	RAATTY	6 cut(s)	425, 505, 547, 1012, 1098, 1779
AcuI	CTGAAG	3 cut(s)	798, 1364, 1905
AdeI	CACNNNGTG	1 cut(s)	1022
AfiI	CCNNNNNNNGG	5 cut(s)	962, 1025, 1275, 1276, 1834
AgsI	TTSAA	7 cut(s)	127, 147, 288, 505, 572, 748, 1954
AhlI	ACTAGT	2 cut(s)	194, 1592
AjnI	CCWGG	3 cut(s)	1018, 1269, 1522
Alw21I	GWGCWC	4 cut(s)	1299, 1549, 1827, 1893
Alw26I	GTCTC	3 cut(s)	880, 1056, 1625
AlwI	GGATC	3 cut(s)	958, 1551, 1616
AlwNI	CAGNNNCTG	3 cut(s)	229, 1261, 1347
Aor13HI	TCCGGA	1 cut(s)	2352
AoxI	GGCC	2 cut(s)	408, 754
ApeKI	GCWGC	9 cut(s)	91, 305, 401, 1398, 1735, 1993, 2000, 2086, 2302
ApoI	RAATTY	6 cut(s)	425, 505, 547, 1012, 1098, 1779
AseI	ATTAAT	1 cut(s)	363
Asp700I	GAANNNNTTC	1 cut(s)	1012
Asp718I	GGTACC	1 cut(s)	2268
AspA2I	CCTAGG	1 cut(s)	1169
AspS9I	GGNCC	4 cut(s)	656, 755, 1719, 1914
AsuC2I	CCSGG	2 cut(s)	753, 2293
AsuNHI	GCTAGC	2 cut(s)	185, 1802
AvaII	GGWCC	3 cut(s)	656, 1719, 1914
AvrII	CCTAGG	1 cut(s)	1169
AxyI	CCTNAGG	1 cut(s)	222
BanI	GGYRCC	1 cut(s)	2268
BanII	GRGCYC	1 cut(s)	1549
BbsI	GAAGAC	4 cut(s)	579, 786, 1032, 1580
Bbv12I	GWGCWC	4 cut(s)	1299, 1549, 1827, 1893
BbvCI	CCTCAGC	2 cut(s)	405, 2364
BbvI	GCAGC	9 cut(s)	78, 317, 413, 1385, 1747, 1980, 1987, 2073, 2314
BccI	CCATC	7 cut(s)	419, 449, 929, 1173, 1747, 2311, 2377
BciT130I	CCWGG	3 cut(s)	1020, 1271, 1524
BcnI	CCSGG	2 cut(s)	753, 2293
BcoDI	GTCTC	3 cut(s)	880, 1056, 1625
BcuI	ACTAGT	2 cut(s)	194, 1592
BfaI	CTAG	8 cut(s)	186, 195, 474, 557, 1170, 1203, 1593, 1803
BfmI	CTRYAG	6 cut(s)	92, 894, 1323, 1410, 1626, 2087
BfuAI	ACCTGC	2 cut(s)	1888, 2296
BisI	GCNGC	9 cut(s)	92, 306, 402, 1399, 1736, 1994, 2001, 2087, 2303
BlnI	CCTAGG	1 cut(s)	1169
BlsI	GCNGC	9 cut(s)	93, 307, 403, 1400, 1737, 1995, 2002, 2088, 2304
Bme1390I	CCNGG	5 cut(s)	753, 1020, 1271, 1524, 2293
Bme18I	GGWCC	3 cut(s)	656, 1719, 1914
BmgT120I	GGNCC	4 cut(s)	656, 755, 1719, 1914
BmiI	GGNNCC	2 cut(s)	1916, 2270
BmrFI	CCNGG	5 cut(s)	753, 1020, 1271, 1524, 2293
BmsI	GCATC	4 cut(s)	478, 1124, 1815, 2350
BmtI	GCTAGC	2 cut(s)	189, 1806
BpiI	GAAGAC	4 cut(s)	579, 786, 1032, 1580
BplI	GAGNNNNNCTC	2 cut(s)	905, 937
BpmI	CTGGAG	1 cut(s)	1708
Bpu10I	CCTNAGC	3 cut(s)	405, 1293, 2364
BpuEI	CTTGAG	3 cut(s)	841, 1387, 1868
BpuMI	CCSGG	2 cut(s)	753, 2293
BsaBI	GATNNNNATC	1 cut(s)	2348
BsaJI	CCNNGG	9 cut(s)	641, 1169, 1269, 1435, 1522, 1609, 2104, 2183, 2291
BsaWI	WCCGGW	2 cut(s)	1834, 2352
BsaXI	ACNNNNNCTCC	2 cut(s)	1072, 1102
Bsc4I	CCNNNNNNNGG	5 cut(s)	962, 1025, 1275, 1276, 1834
Bse1I	ACTGG	5 cut(s)	469, 1122, 1578, 1765, 2270
Bse21I	CCTNAGG	1 cut(s)	222
Bse3DI	GCAATG	1 cut(s)	2297
Bse8I	GATNNNNATC	1 cut(s)	2348
BseAI	TCCGGA	1 cut(s)	2352
BseBI	CCWGG	3 cut(s)	1020, 1271, 1524
BseDI	CCNNGG	9 cut(s)	641, 1169, 1269, 1435, 1522, 1609, 2104, 2183, 2291
BseGI	GGATG	8 cut(s)	10, 208, 940, 1165, 2023, 2281, 2365, 2374
BseJI	GATNNNNATC	1 cut(s)	2348
BseLI	CCNNNNNNNGG	5 cut(s)	962, 1025, 1275, 1276, 1834
BseMI	GCAATG	1 cut(s)	2297
BseMII	CTCAG	8 cut(s)	78, 236, 396, 592, 602, 693, 1284, 2355
BseNI	ACTGG	5 cut(s)	469, 1122, 1578, 1765, 2270
BseXI	GCAGC	9 cut(s)	78, 317, 413, 1385, 1747, 1980, 1987, 2073, 2314
BshFI	GGCC	2 cut(s)	410, 756
BshNI	GGYRCC	1 cut(s)	2268
BsiHKAI	GWGCWC	4 cut(s)	1299, 1549, 1827, 1893
BsiSI	CCGG	4 cut(s)	753, 1835, 2293, 2353
BslFI	GGGAC	1 cut(s)	1900
BslI	CCNNNNNNNGG	5 cut(s)	962, 1025, 1275, 1276, 1834
BsmAI	GTCTC	3 cut(s)	880, 1056, 1625
BsmFI	GGGAC	1 cut(s)	1900
BsmI	GAATGC	1 cut(s)	403
BsnI	GGCC	2 cut(s)	410, 756
Bsp1286I	GDGCHC	4 cut(s)	1299, 1549, 1827, 1893
Bsp13I	TCCGGA	1 cut(s)	2352
Bsp143I	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
BspACI	CCGC	1 cut(s)	1924
BspANI	GGCC	2 cut(s)	410, 756
BspCNI	CTCAG	8 cut(s)	79, 235, 397, 591, 601, 694, 1285, 2356
BspEI	TCCGGA	1 cut(s)	2352
BspLI	GGNNCC	2 cut(s)	1916, 2270
BspMAI	CTGCAG	3 cut(s)	96, 1630, 2091
BspMI	ACCTGC	2 cut(s)	1888, 2296
BspOI	GCTAGC	2 cut(s)	189, 1806
BspPI	GGATC	3 cut(s)	958, 1551, 1616
BspQI	GCTCTTC	2 cut(s)	1881, 2126
BspT107I	GGYRCC	1 cut(s)	2268
BsrDI	GCAATG	1 cut(s)	2297
BsrI	ACTGG	5 cut(s)	469, 1122, 1578, 1765, 2270
BssECI	CCNNGG	9 cut(s)	641, 1169, 1269, 1435, 1522, 1609, 2104, 2183, 2291
BssMI	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
BssNAI	GTATAC	2 cut(s)	1606, 2158
BssT1I	CCWWGG	6 cut(s)	641, 1169, 1435, 1609, 2104, 2183
Bst1107I	GTATAC	2 cut(s)	1606, 2158
Bst2UI	CCWGG	3 cut(s)	1020, 1271, 1524
Bst6I	CTCTTC	7 cut(s)	334, 384, 558, 703, 1881, 1951, 2126
BstC8I	GCNNGC	9 cut(s)	187, 767, 849, 1483, 1804, 1998, 2005, 2091, 2117
BstENI	CCTNNNNNAGG	1 cut(s)	1023
BstF5I	GGATG	8 cut(s)	10, 208, 940, 1165, 2023, 2281, 2365, 2374
BstKTI	GATC	6 cut(s)	953, 1002, 1559, 1624, 1971, 2333
BstMAI	GTCTC	3 cut(s)	880, 1056, 1625
BstMBI	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
BstMWI	GCNNNNNNNGC	3 cut(s)	311, 407, 762
BstNI	CCWGG	3 cut(s)	1020, 1271, 1524
BstNSI	RCATGY	3 cut(s)	769, 893, 2119
BstSCI	CCNGG	5 cut(s)	751, 1018, 1269, 1522, 2291
BstSFI	CTRYAG	6 cut(s)	92, 894, 1323, 1410, 1626, 2087
BstV1I	GCAGC	9 cut(s)	78, 317, 413, 1385, 1747, 1980, 1987, 2073, 2314
BstV2I	GAAGAC	4 cut(s)	579, 786, 1032, 1580
BstX2I	RGATCY	2 cut(s)	950, 1556
BstXI	CCANNNNNNTGG	1 cut(s)	1567
BstYI	RGATCY	2 cut(s)	950, 1556
BstZ17I	GTATAC	2 cut(s)	1606, 2158
Bsu36I	CCTNAGG	1 cut(s)	222
BsuRI	GGCC	2 cut(s)	410, 756
BtgZI	GCGATG	1 cut(s)	661
BtsCI	GGATG	8 cut(s)	10, 208, 940, 1165, 2023, 2281, 2365, 2374
BtsI	GCAGTG	1 cut(s)	1995
BtsIMutI	CAGTG	7 cut(s)	84, 1109, 1129, 1231, 1926, 1995, 2170
BveI	ACCTGC	2 cut(s)	1888, 2296
Cac8I	GCNNGC	9 cut(s)	187, 767, 849, 1483, 1804, 1998, 2005, 2091, 2117
CaiI	CAGNNNCTG	3 cut(s)	229, 1261, 1347
Cfr13I	GGNCC	4 cut(s)	656, 755, 1719, 1914
CsiI	ACCWGGT	1 cut(s)	1018
DpnI	GATC	6 cut(s)	952, 1001, 1558, 1623, 1970, 2332
DpnII	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
DraI	TTTAAA	1 cut(s)	1455
DraIII	CACNNNGTG	1 cut(s)	1022
Eam1104I	CTCTTC	7 cut(s)	334, 384, 558, 703, 1881, 1951, 2126
EarI	CTCTTC	7 cut(s)	334, 384, 558, 703, 1881, 1951, 2126
Ecl136II	GAGCTC	1 cut(s)	1547
Eco130I	CCWWGG	6 cut(s)	641, 1169, 1435, 1609, 2104, 2183
Eco24I	GRGCYC	1 cut(s)	1549
Eco32I	GATATC	3 cut(s)	204, 1284, 2350
Eco47I	GGWCC	3 cut(s)	656, 1719, 1914
Eco53kI	GAGCTC	1 cut(s)	1547
Eco57I	CTGAAG	3 cut(s)	798, 1364, 1905
Eco81I	CCTNAGG	1 cut(s)	222
EcoICRI	GAGCTC	1 cut(s)	1547
EcoNI	CCTNNNNNAGG	1 cut(s)	1023
EcoO109I	RGGNCCY	2 cut(s)	1719, 1914
EcoRI	GAATTC	2 cut(s)	505, 1779
EcoRII	CCWGG	3 cut(s)	1018, 1269, 1522
EcoRV	GATATC	3 cut(s)	204, 1284, 2350
EcoT14I	CCWWGG	6 cut(s)	641, 1169, 1435, 1609, 2104, 2183
EcoT22I	ATGCAT	1 cut(s)	493
EcoT38I	GRGCYC	1 cut(s)	1549
ErhI	CCWWGG	6 cut(s)	641, 1169, 1435, 1609, 2104, 2183
FaqI	GGGAC	1 cut(s)	1900
FauNDI	CATATG	1 cut(s)	132
FblI	GTMKAC	2 cut(s)	1605, 2157
Fnu4HI	GCNGC	9 cut(s)	92, 306, 402, 1399, 1736, 1994, 2001, 2087, 2303
FokI	GGATG	8 cut(s)	17, 195, 947, 1152, 2030, 2268, 2372, 2381
FriOI	GRGCYC	1 cut(s)	1549
Fsp4HI	GCNGC	9 cut(s)	92, 306, 402, 1399, 1736, 1994, 2001, 2087, 2303
FspBI	CTAG	8 cut(s)	186, 195, 474, 557, 1170, 1203, 1593, 1803
GluI	GCNGC	9 cut(s)	92, 306, 402, 1399, 1736, 1994, 2001, 2087, 2303
GsuI	CTGGAG	1 cut(s)	1708
HaeIII	GGCC	2 cut(s)	410, 756
HapII	CCGG	4 cut(s)	753, 1835, 2293, 2353
HincII	GTYRAC	1 cut(s)	2263
HindII	GTYRAC	1 cut(s)	2263
HindIII	AAGCTT	1 cut(s)	2005
HpaII	CCGG	4 cut(s)	753, 1835, 2293, 2353
Hpy166II	GTNNAC	5 cut(s)	463, 1519, 1606, 2158, 2263
Hpy188III	TCNNGA	8 cut(s)	448, 474, 1046, 1292, 1667, 1725, 2334, 2353
Hpy8I	GTNNAC	5 cut(s)	463, 1519, 1606, 2158, 2263
HpyAV	CCTTC	4 cut(s)	267, 956, 2180, 2350
HpyF10VI	GCNNNNNNNGC	3 cut(s)	311, 407, 762
Kpn2I	TCCGGA	1 cut(s)	2352
KpnI	GGTACC	1 cut(s)	2272
Kzo9I	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
LguI	GCTCTTC	2 cut(s)	1881, 2126
LmnI	GCTCC	3 cut(s)	537, 1544, 1732
Lsp1109I	GCAGC	9 cut(s)	78, 317, 413, 1385, 1747, 1980, 1987, 2073, 2314
LweI	GCATC	4 cut(s)	478, 1124, 1815, 2350
MabI	ACCWGGT	1 cut(s)	1018
MaeI	CTAG	8 cut(s)	186, 195, 474, 557, 1170, 1203, 1593, 1803
MaeIII	GTNAC	4 cut(s)	162, 1767, 2165, 2286
MalI	GATC	6 cut(s)	952, 1001, 1558, 1623, 1970, 2332
MboI	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
MfeI	CAATTG	1 cut(s)	1561
MflI	RGATCY	2 cut(s)	950, 1556
MhlI	GDGCHC	4 cut(s)	1299, 1549, 1827, 1893
MlyI	GAGTC	2 cut(s)	1190, 2033
MmeI	TCCRAC	1 cut(s)	1191
Mph1103I	ATGCAT	1 cut(s)	493
MroI	TCCGGA	1 cut(s)	2352
MroXI	GAANNNNTTC	1 cut(s)	1012
MseI	TTAA	6 cut(s)	363, 609, 789, 1145, 1220, 1454
MspA1I	CMGCKG	2 cut(s)	404, 1398
MspI	CCGG	4 cut(s)	753, 1835, 2293, 2353
MspR9I	CCNGG	5 cut(s)	753, 1020, 1271, 1524, 2293
MunI	CAATTG	1 cut(s)	1561
Mva1269I	GAATGC	1 cut(s)	403
MvaI	CCWGG	3 cut(s)	1020, 1271, 1524
MwoI	GCNNNNNNNGC	3 cut(s)	311, 407, 762
NciI	CCSGG	2 cut(s)	753, 2293
NdeI	CATATG	1 cut(s)	132
NdeII	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
NheI	GCTAGC	2 cut(s)	185, 1802
NlaIV	GGNNCC	2 cut(s)	1916, 2270
NmeAIII	GCCGAG	1 cut(s)	281
NmuCI	GTSAC	3 cut(s)	1767, 2165, 2286
NsiI	ATGCAT	1 cut(s)	493
NspI	RCATGY	3 cut(s)	769, 893, 2119
PaeI	GCATGC	2 cut(s)	769, 2119
PciSI	GCTCTTC	2 cut(s)	1881, 2126
PctI	GAATGC	1 cut(s)	403
PdmI	GAANNNNTTC	1 cut(s)	1012
PfeI	GAWTC	8 cut(s)	38, 113, 584, 716, 1091, 1469, 1796, 2239
PflFI	GACNNNGTC	1 cut(s)	1636
PkrI	GCNGC	9 cut(s)	93, 307, 403, 1400, 1737, 1995, 2002, 2088, 2304
PleI	GAGTC	2 cut(s)	1189, 2033
PpsI	GAGTC	2 cut(s)	1189, 2033
PpuMI	RGGWCCY	2 cut(s)	1719, 1914
PshBI	ATTAAT	1 cut(s)	363
Psp124BI	GAGCTC	1 cut(s)	1549
Psp5II	RGGWCCY	2 cut(s)	1719, 1914
Psp6I	CCWGG	3 cut(s)	1018, 1269, 1522
PspGI	CCWGG	3 cut(s)	1018, 1269, 1522
PspN4I	GGNNCC	2 cut(s)	1916, 2270
PspPI	GGNCC	4 cut(s)	656, 755, 1719, 1914
PspPPI	RGGWCCY	2 cut(s)	1719, 1914
PstI	CTGCAG	3 cut(s)	96, 1630, 2091
PstNI	CAGNNNCTG	3 cut(s)	229, 1261, 1347
PsuI	RGATCY	2 cut(s)	950, 1556
PsyI	GACNNNGTC	1 cut(s)	1636
PvuII	CAGCTG	2 cut(s)	404, 1398
SacI	GAGCTC	1 cut(s)	1549
SapI	GCTCTTC	2 cut(s)	1881, 2126
SaqAI	TTAA	6 cut(s)	363, 609, 789, 1145, 1220, 1454
SatI	GCNGC	9 cut(s)	92, 306, 402, 1399, 1736, 1994, 2001, 2087, 2303
Sau3AI	GATC	6 cut(s)	950, 999, 1556, 1621, 1968, 2330
Sau96I	GGNCC	4 cut(s)	656, 755, 1719, 1914
SchI	GAGTC	2 cut(s)	1190, 2033
ScrFI	CCNGG	5 cut(s)	753, 1020, 1271, 1524, 2293
SduI	GDGCHC	4 cut(s)	1299, 1549, 1827, 1893
SexAI	ACCWGGT	1 cut(s)	1018
SfaNI	GCATC	4 cut(s)	478, 1124, 1815, 2350
SfcI	CTRYAG	6 cut(s)	92, 894, 1323, 1410, 1626, 2087
SinI	GGWCC	3 cut(s)	656, 1719, 1914
SmlI	CTYRAG	3 cut(s)	820, 1402, 1847
SmoI	CTYRAG	3 cut(s)	820, 1402, 1847
SpeI	ACTAGT	2 cut(s)	194, 1592
SphI	GCATGC	2 cut(s)	769, 2119
SsiI	CCGC	1 cut(s)	1924
SspI	AATATT	2 cut(s)	787, 856
SspMI	CTAG	8 cut(s)	186, 195, 474, 557, 1170, 1203, 1593, 1803
SstI	GAGCTC	1 cut(s)	1549
StyD4I	CCNGG	5 cut(s)	751, 1018, 1269, 1522, 2291
StyI	CCWWGG	6 cut(s)	641, 1169, 1435, 1609, 2104, 2183
TaqI	TCGA	5 cut(s)	677, 1809, 2151, 2173, 2212
TatI	WGTACW	4 cut(s)	388, 441, 1676, 1843
TfiI	GAWTC	8 cut(s)	38, 113, 584, 716, 1091, 1469, 1796, 2239
Tru1I	TTAA	6 cut(s)	363, 609, 789, 1145, 1220, 1454
Tru9I	TTAA	6 cut(s)	363, 609, 789, 1145, 1220, 1454
TscAI	CASTG	7 cut(s)	91, 1109, 1129, 1231, 1933, 1995, 2170
TseFI	GTSAC	3 cut(s)	1767, 2165, 2286
TseI	GCWGC	9 cut(s)	91, 305, 401, 1398, 1735, 1993, 2000, 2086, 2302
Tsp45I	GTSAC	3 cut(s)	1767, 2165, 2286
TspGWI	ACGGA	1 cut(s)	2274
TspRI	CASTG	7 cut(s)	91, 1109, 1129, 1231, 1933, 1995, 2170
Tth111I	GACNNNGTC	1 cut(s)	1636
VpaK11BI	GGWCC	3 cut(s)	656, 1719, 1914
VspI	ATTAAT	1 cut(s)	363
XagI	CCTNNNNNAGG	1 cut(s)	1023
XapI	RAATTY	6 cut(s)	425, 505, 547, 1012, 1098, 1779
XbaI	TCTAGA	1 cut(s)	473
XceI	RCATGY	3 cut(s)	769, 893, 2119
XmaJI	CCTAGG	1 cut(s)	1169
XmiI	GTMKAC	2 cut(s)	1605, 2157
XmnI	GAANNNNTTC	1 cut(s)	1012
XspI	CTAG	8 cut(s)	186, 195, 474, 557, 1170, 1203, 1593, 1803
Zsp2I	ATGCAT	1 cut(s)	493

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.