Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0002167.1

Orthogroup ID

OG0006931

Physical Location & Seq

Genomic Coordinates Forward (+)

26073 .. 29467

Gene Structure 3395 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0002167.1_g000007.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2634 bp

atgacaccaccaaagagccctatggtatgtgagaagtaccagacaggctgtatgtggcgtttatatggcctcttcgactttcgccaaagtcattctgataagaagctgctttcagataataagaggcattcaaacagatttgataatagaatttctaagaccaagttggatttgcttaacaatttggatgagaagagccaaagcatggatgacaaaatgacggacagaactcaaacagttgattctggtatggcaagtaaaagaaagcataagggggaaaagttatccactgagctgcagatgaataagaaaattgattctgatgaattgaaacatatgcaatccaattcaaaacttgcttgtcagttacctaagaagaaaggaaaggctagcaaaactagtcagatatctcatcctctttcacctcagggtctgaaatgtgaagctaagaatgggaaaccttcttattcagtttcagtagaaacatcttcaaacaagctcaactcggcagcattggcaaaagaggtgcgtggcaaaaagagaagaggatttggttgtaaaagtattaattatgagattactcttccacaagtacagaagaatgcagctgaggccatcataaatcagaaattcattgatgaaaagtacatcaggacagatggggtgaaccaccagtctagacaattatcagatgcattagagattttgaattctaataaagaattattcataaagctcctacaagacccaaattctctactagcaaaacatattgaagacctcagagaatctcaggcagtaaaacatcagattaaatctccctctgacatcaatgtttcagaaccaaggcgatgtgatggtcctgctggtaatcagaagtcgaaatcctgtgatacctactcttctgaggaaagtgatgattcccatttttcagacagaatagtagttttgaaacccggcccaagtagcatgcaaagtgctgaagacaatattaagtgttcctctctgcaatcttattacagcttgagaaataacgggcagagtgaaatgcctgcgaatatttcttttagtcagataaagaagaagttgagacatgctataggggtaagcagaaaagagcaacactctaagtcactggatggtacattacatggatctccctatgaaggctcgaaagaggattgtaaaggaaaaggtgtggagatcattagaagaaattcacctggtggaggaatgataatgtcttctcttgatgtaaagaaaagagacaacatgagcgaggggagagaatgtgaatcacaaattcagtgtgaaactgcatcaaccagtggaagtggtcttgggaacttaaacatttcagttgtttgccatcctaggctaaaggagtctgaaagttctttggaggctagattgttggaattgttaaacagtggaaacaaggacaaaaaccacaaaaagcaggaactgaaaaccctggaaagggtgatatcatttcctgagcacgacttcttgcctacacgcagtcctgtaggactttcacccaacagcaactgccaactgttatatgagaacaaatggaggcttcagaaagaaaaaaccagctgctcaagtcctacagagaataatcgcaccatgcaccaaggagaaatcaattctttaaaacagccctctgaatcagaaagtgcttgcagaaatggtactgtggaaactaaagatactgtccacccaggagaaaatagttctttgggagctctaagaagatccaattgcatggagaagaccagtaccacagaaactagtgatactgtataccaaggagaaactgatcctgcagagacacagtctgaactaaattgcaaagacaaggctcttgattggagtacagataaagccgacttgtacgaggaagatgaatatattaggacctccagacaggagcagccatcaacatcttcacctgatgttttccagtcacctccaagaattcagagaggggaagattctgctagcatcgaagataaaggagagcacccaagtccggtatctgtacttgagcagttttttgtagataccatatctgaacctgctgaagagcaccattctgctcgtcgtgtgaggtcccctatccgcactgacagtagcagtacctcttctttgaatgaacatgaattgatctccgagtatattcaggcagtgctgcgagctgcaagcttagattgggatgaaatctcaatgatgtgcgactcaacagaccaactgcttgacccgttcttgtttgacacggtaaagctgcaggcaaaccaactccacggtgattgcatgctcctctttgactgtatagatgaagtccttgtcgaagtataccacagtgaccttcgatattccccttggctgtcatttatcaagccaaatgttcgacaacttccgattgagaaaactgtgattcataaggtgatgaagtatgttgactggtacctctcacttcatccgtcaccccggacattgcagcaggttgttcagatggatatagcacgatctggaacatggatagatatccggaaggatgctgaggatgtcgtttttcagatggtagaagatgttttagaagaattgataatagaaaccataatttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DUF3741 DUF4378

Protein Analysis

877

Amino Acids

98.88

Weight (kDa)

6.25

Isoelectric Point (pI)

59.79

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0006931)

Species	Orthologous Gene IDs
fragaria_vesca	FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600 FvH4_5g02600
malus_domestica	MD06G1085000.v1.1 MD14G1105800.v1.1
prunus_persica	Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1 Prupe.5G101000_v2.0.a1
pyrus_communis	pycom06g08110 pycom14g10130
rosa_chinensis	RchiOBHm_Chr7g0197501
rosa_laevigata	RLG00000003935 RLG00000019391
rosa_multiflora	Rmu_sc0002167.1_g000007 Rmu_sc0002395.1_g000015
rosa_roxburghii	Rroxscaffold_3G00258410
rosa_rugosa	Rorug07G0040200 Rorug07G0040200
rosa_samantha	Rh4CG285900 Rh7AG165300 Rh7BG167400 Rh7CG173800 Rh7DG166700
rosa_wichuraiana	Rw7G014410

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	2092, 2500
Acc65I	GGTACC	1 cut(s)	2472
AccB1I	GGYRCC	1 cut(s)	2472
AccB7I	CCANNNNNTGG	1 cut(s)	205
AccI	GTMKAC	2 cut(s)	1809, 2361
AccIII	TCCGGA	1 cut(s)	2556
AciI	CCGC	1 cut(s)	2128
AclWI	GGATC	3 cut(s)	1162, 1755, 1820
AcsI	RAATTY	7 cut(s)	150, 629, 709, 751, 1216, 1302, 1983
AcuI	CTGAAG	3 cut(s)	1002, 1568, 2109
AdeI	CACNNNGTG	1 cut(s)	1226
AfiI	CCNNNNNNNGG	6 cut(s)	205, 1166, 1229, 1479, 1480, 2038
AgsI	TTSAA	8 cut(s)	132, 331, 351, 492, 709, 776, 952, 2158
AhlI	ACTAGT	2 cut(s)	398, 1796
AjnI	CCWGG	3 cut(s)	1222, 1473, 1726
Alw21I	GWGCWC	4 cut(s)	1503, 1753, 2031, 2097
Alw26I	GTCTC	3 cut(s)	1084, 1260, 1829
AlwI	GGATC	3 cut(s)	1162, 1755, 1820
AlwNI	CAGNNNCTG	3 cut(s)	433, 1465, 1551
Aor13HI	TCCGGA	1 cut(s)	2556
AoxI	GGCC	3 cut(s)	67, 612, 958
ApoI	RAATTY	7 cut(s)	150, 629, 709, 751, 1216, 1302, 1983
AseI	ATTAAT	1 cut(s)	567
Asp700I	GAANNNNTTC	1 cut(s)	1216
Asp718I	GGTACC	1 cut(s)	2472
AspA2I	CCTAGG	1 cut(s)	1373
AspS9I	GGNCC	4 cut(s)	860, 959, 1923, 2118
AsuC2I	CCSGG	2 cut(s)	957, 2497
AsuNHI	GCTAGC	2 cut(s)	389, 2006
AvaII	GGWCC	3 cut(s)	860, 1923, 2118
AvrII	CCTAGG	1 cut(s)	1373
AxyI	CCTNAGG	1 cut(s)	426
BanI	GGYRCC	1 cut(s)	2472
BanII	GRGCYC	2 cut(s)	20, 1753
BbsI	GAAGAC	4 cut(s)	783, 990, 1236, 1784
Bbv12I	GWGCWC	4 cut(s)	1503, 1753, 2031, 2097
BbvCI	CCTCAGC	2 cut(s)	609, 2568
BccI	CCATC	8 cut(s)	623, 653, 851, 1133, 1377, 1951, 2515, 2581
BciT130I	CCWGG	3 cut(s)	1224, 1475, 1728
BcnI	CCSGG	2 cut(s)	957, 2497
BcoDI	GTCTC	3 cut(s)	1084, 1260, 1829
BcuI	ACTAGT	2 cut(s)	398, 1796
BfaI	CTAG	8 cut(s)	390, 399, 678, 761, 1374, 1407, 1797, 2007
BfmI	CTRYAG	6 cut(s)	296, 1098, 1527, 1614, 1830, 2291
BfuAI	ACCTGC	2 cut(s)	2092, 2500
BlnI	CCTAGG	1 cut(s)	1373
Bme1390I	CCNGG	5 cut(s)	957, 1224, 1475, 1728, 2497
Bme18I	GGWCC	3 cut(s)	860, 1923, 2118
BmgT120I	GGNCC	4 cut(s)	860, 959, 1923, 2118
BmiI	GGNNCC	2 cut(s)	2120, 2474
BmrFI	CCNGG	5 cut(s)	957, 1224, 1475, 1728, 2497
BmsI	GCATC	4 cut(s)	682, 1328, 2019, 2554
BmtI	GCTAGC	2 cut(s)	393, 2010
BpiI	GAAGAC	4 cut(s)	783, 990, 1236, 1784
BplI	GAGNNNNNCTC	2 cut(s)	1109, 1141
BpmI	CTGGAG	1 cut(s)	1912
Bpu10I	CCTNAGC	3 cut(s)	609, 1497, 2568
BpuEI	CTTGAG	3 cut(s)	1045, 1591, 2072
BpuMI	CCSGG	2 cut(s)	957, 2497
BsaBI	GATNNNNATC	1 cut(s)	2552
BsaJI	CCNNGG	9 cut(s)	845, 1373, 1473, 1639, 1726, 1813, 2308, 2387, 2495
BsaWI	WCCGGW	2 cut(s)	2038, 2556
BsaXI	ACNNNNNCTCC	2 cut(s)	1276, 1306
Bsc4I	CCNNNNNNNGG	6 cut(s)	205, 1166, 1229, 1479, 1480, 2038
Bse1I	ACTGG	6 cut(s)	673, 1140, 1326, 1782, 1969, 2474
Bse21I	CCTNAGG	1 cut(s)	426
Bse3DI	GCAATG	1 cut(s)	2501
Bse8I	GATNNNNATC	1 cut(s)	2552
BseAI	TCCGGA	1 cut(s)	2556
BseBI	CCWGG	3 cut(s)	1224, 1475, 1728
BseDI	CCNNGG	9 cut(s)	845, 1373, 1473, 1639, 1726, 1813, 2308, 2387, 2495
BseGI	GGATG	9 cut(s)	193, 214, 412, 1144, 1369, 2227, 2485, 2569, 2578
BseJI	GATNNNNATC	1 cut(s)	2552
BseLI	CCNNNNNNNGG	6 cut(s)	205, 1166, 1229, 1479, 1480, 2038
BseMI	GCAATG	1 cut(s)	2501
BseMII	CTCAG	8 cut(s)	282, 440, 600, 796, 806, 897, 1488, 2559
BseNI	ACTGG	6 cut(s)	673, 1140, 1326, 1782, 1969, 2474
BseRI	GAGGAG	1 cut(s)	2315
BshFI	GGCC	3 cut(s)	69, 614, 960
BshNI	GGYRCC	1 cut(s)	2472
BsiHKAI	GWGCWC	4 cut(s)	1503, 1753, 2031, 2097
BsiSI	CCGG	4 cut(s)	957, 2039, 2497, 2557
BslFI	GGGAC	1 cut(s)	2104
BslI	CCNNNNNNNGG	6 cut(s)	205, 1166, 1229, 1479, 1480, 2038
BsmAI	GTCTC	3 cut(s)	1084, 1260, 1829
BsmFI	GGGAC	1 cut(s)	2104
BsmI	GAATGC	2 cut(s)	127, 607
BsnI	GGCC	3 cut(s)	69, 614, 960
Bsp1286I	GDGCHC	5 cut(s)	20, 1503, 1753, 2031, 2097
Bsp13I	TCCGGA	1 cut(s)	2556
Bsp143I	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
BspACI	CCGC	1 cut(s)	2128
BspANI	GGCC	3 cut(s)	69, 614, 960
BspCNI	CTCAG	8 cut(s)	283, 439, 601, 795, 805, 898, 1489, 2560
BspEI	TCCGGA	1 cut(s)	2556
BspLI	GGNNCC	2 cut(s)	2120, 2474
BspMAI	CTGCAG	3 cut(s)	300, 1834, 2295
BspMI	ACCTGC	2 cut(s)	2092, 2500
BspOI	GCTAGC	2 cut(s)	393, 2010
BspPI	GGATC	3 cut(s)	1162, 1755, 1820
BspQI	GCTCTTC	2 cut(s)	188, 2085
BspT107I	GGYRCC	1 cut(s)	2472
BsrDI	GCAATG	1 cut(s)	2501
BsrI	ACTGG	6 cut(s)	673, 1140, 1326, 1782, 1969, 2474
BssECI	CCNNGG	9 cut(s)	845, 1373, 1473, 1639, 1726, 1813, 2308, 2387, 2495
BssMI	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
BssNAI	GTATAC	2 cut(s)	1810, 2362
BssT1I	CCWWGG	5 cut(s)	845, 1373, 1639, 1813, 2387
Bst1107I	GTATAC	2 cut(s)	1810, 2362
Bst2UI	CCWGG	3 cut(s)	1224, 1475, 1728
Bst6I	CTCTTC	7 cut(s)	77, 188, 538, 588, 907, 2085, 2155
BstC8I	GCNNGC	9 cut(s)	391, 971, 1053, 1687, 2008, 2202, 2209, 2295, 2321
BstDSI	CCRYGG	1 cut(s)	2308
BstENI	CCTNNNNNAGG	1 cut(s)	1227
BstF5I	GGATG	9 cut(s)	193, 214, 412, 1144, 1369, 2227, 2485, 2569, 2578
BstKTI	GATC	6 cut(s)	1157, 1206, 1763, 1828, 2175, 2537
BstMAI	GTCTC	3 cut(s)	1084, 1260, 1829
BstMBI	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
BstMWI	GCNNNNNNNGC	3 cut(s)	515, 611, 966
BstNI	CCWGG	3 cut(s)	1224, 1475, 1728
BstNSI	RCATGY	3 cut(s)	973, 1097, 2323
BstSCI	CCNGG	5 cut(s)	955, 1222, 1473, 1726, 2495
BstSFI	CTRYAG	6 cut(s)	296, 1098, 1527, 1614, 1830, 2291
BstV2I	GAAGAC	4 cut(s)	783, 990, 1236, 1784
BstX2I	RGATCY	2 cut(s)	1154, 1760
BstXI	CCANNNNNNTGG	1 cut(s)	1771
BstYI	RGATCY	2 cut(s)	1154, 1760
BstZ17I	GTATAC	2 cut(s)	1810, 2362
Bsu36I	CCTNAGG	1 cut(s)	426
BsuRI	GGCC	3 cut(s)	69, 614, 960
BtgI	CCRYGG	1 cut(s)	2308
BtgZI	GCGATG	1 cut(s)	865
BtsCI	GGATG	9 cut(s)	193, 214, 412, 1144, 1369, 2227, 2485, 2569, 2578
BtsI	GCAGTG	1 cut(s)	2199
BtsIMutI	CAGTG	8 cut(s)	288, 1133, 1313, 1333, 1435, 2130, 2199, 2374
BveI	ACCTGC	2 cut(s)	2092, 2500
Cac8I	GCNNGC	9 cut(s)	391, 971, 1053, 1687, 2008, 2202, 2209, 2295, 2321
CaiI	CAGNNNCTG	3 cut(s)	433, 1465, 1551
Cfr13I	GGNCC	4 cut(s)	860, 959, 1923, 2118
CsiI	ACCWGGT	1 cut(s)	1222
CspCI	CAANNNNNGTGG	2 cut(s)	2297, 2332
DpnI	GATC	6 cut(s)	1156, 1205, 1762, 1827, 2174, 2536
DpnII	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
DraI	TTTAAA	1 cut(s)	1659
DraIII	CACNNNGTG	1 cut(s)	1226
Eam1104I	CTCTTC	7 cut(s)	77, 188, 538, 588, 907, 2085, 2155
EarI	CTCTTC	7 cut(s)	77, 188, 538, 588, 907, 2085, 2155
Ecl136II	GAGCTC	1 cut(s)	1751
Eco130I	CCWWGG	5 cut(s)	845, 1373, 1639, 1813, 2387
Eco24I	GRGCYC	2 cut(s)	20, 1753
Eco32I	GATATC	3 cut(s)	408, 1488, 2554
Eco47I	GGWCC	3 cut(s)	860, 1923, 2118
Eco53kI	GAGCTC	1 cut(s)	1751
Eco57I	CTGAAG	3 cut(s)	1002, 1568, 2109
Eco81I	CCTNAGG	1 cut(s)	426
EcoICRI	GAGCTC	1 cut(s)	1751
EcoNI	CCTNNNNNAGG	1 cut(s)	1227
EcoO109I	RGGNCCY	2 cut(s)	1923, 2118
EcoRI	GAATTC	2 cut(s)	709, 1983
EcoRII	CCWGG	3 cut(s)	1222, 1473, 1726
EcoRV	GATATC	3 cut(s)	408, 1488, 2554
EcoT14I	CCWWGG	5 cut(s)	845, 1373, 1639, 1813, 2387
EcoT22I	ATGCAT	1 cut(s)	697
EcoT38I	GRGCYC	2 cut(s)	20, 1753
ErhI	CCWWGG	5 cut(s)	845, 1373, 1639, 1813, 2387
FaqI	GGGAC	1 cut(s)	2104
FauNDI	CATATG	1 cut(s)	336
FblI	GTMKAC	2 cut(s)	1809, 2361
FokI	GGATG	9 cut(s)	200, 221, 399, 1151, 1356, 2234, 2472, 2576, 2585
FriOI	GRGCYC	2 cut(s)	20, 1753
FspBI	CTAG	8 cut(s)	390, 399, 678, 761, 1374, 1407, 1797, 2007
GsuI	CTGGAG	1 cut(s)	1912
HaeIII	GGCC	3 cut(s)	69, 614, 960
HapII	CCGG	4 cut(s)	957, 2039, 2497, 2557
HincII	GTYRAC	1 cut(s)	2467
HindII	GTYRAC	1 cut(s)	2467
HindIII	AAGCTT	1 cut(s)	2209
HpaII	CCGG	4 cut(s)	957, 2039, 2497, 2557
Hpy166II	GTNNAC	5 cut(s)	667, 1723, 1810, 2362, 2467
Hpy188III	TCNNGA	8 cut(s)	652, 678, 1250, 1496, 1871, 1929, 2538, 2557
Hpy8I	GTNNAC	5 cut(s)	667, 1723, 1810, 2362, 2467
Hpy99I	CGWCG	1 cut(s)	2112
HpyAV	CCTTC	4 cut(s)	471, 1160, 2384, 2554
HpyF10VI	GCNNNNNNNGC	3 cut(s)	515, 611, 966
Kpn2I	TCCGGA	1 cut(s)	2556
KpnI	GGTACC	1 cut(s)	2476
Kzo9I	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
LguI	GCTCTTC	2 cut(s)	188, 2085
LmnI	GCTCC	4 cut(s)	741, 1748, 1936, 2328
LweI	GCATC	4 cut(s)	682, 1328, 2019, 2554
MabI	ACCWGGT	1 cut(s)	1222
MaeI	CTAG	8 cut(s)	390, 399, 678, 761, 1374, 1407, 1797, 2007
MaeIII	GTNAC	5 cut(s)	366, 1131, 1971, 2369, 2490
MalI	GATC	6 cut(s)	1156, 1205, 1762, 1827, 2174, 2536
MboI	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
MfeI	CAATTG	1 cut(s)	1765
MflI	RGATCY	2 cut(s)	1154, 1760
MhlI	GDGCHC	5 cut(s)	20, 1503, 1753, 2031, 2097
MlyI	GAGTC	2 cut(s)	1394, 2237
MmeI	TCCRAC	2 cut(s)	147, 1395
Mph1103I	ATGCAT	1 cut(s)	697
MroI	TCCGGA	1 cut(s)	2556
MroXI	GAANNNNTTC	1 cut(s)	1216
MseI	TTAA	7 cut(s)	177, 567, 813, 993, 1349, 1424, 1658
MspA1I	CMGCKG	2 cut(s)	608, 1602
MspI	CCGG	4 cut(s)	957, 2039, 2497, 2557
MspR9I	CCNGG	5 cut(s)	957, 1224, 1475, 1728, 2497
MunI	CAATTG	1 cut(s)	1765
Mva1269I	GAATGC	2 cut(s)	127, 607
MvaI	CCWGG	3 cut(s)	1224, 1475, 1728
MwoI	GCNNNNNNNGC	3 cut(s)	515, 611, 966
NciI	CCSGG	2 cut(s)	957, 2497
NdeI	CATATG	1 cut(s)	336
NdeII	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
NheI	GCTAGC	2 cut(s)	389, 2006
NlaIV	GGNNCC	2 cut(s)	2120, 2474
NmeAIII	GCCGAG	1 cut(s)	485
NmuCI	GTSAC	4 cut(s)	1131, 1971, 2369, 2490
NsiI	ATGCAT	1 cut(s)	697
NspI	RCATGY	3 cut(s)	973, 1097, 2323
PaeI	GCATGC	2 cut(s)	973, 2323
PciSI	GCTCTTC	2 cut(s)	188, 2085
PctI	GAATGC	2 cut(s)	127, 607
PdmI	GAANNNNTTC	1 cut(s)	1216
PfeI	GAWTC	8 cut(s)	242, 317, 788, 920, 1295, 1673, 2000, 2443
PflFI	GACNNNGTC	1 cut(s)	1840
PflMI	CCANNNNNTGG	1 cut(s)	205
PleI	GAGTC	2 cut(s)	1393, 2237
PpsI	GAGTC	2 cut(s)	1393, 2237
PpuMI	RGGWCCY	2 cut(s)	1923, 2118
PshBI	ATTAAT	1 cut(s)	567
Psp124BI	GAGCTC	1 cut(s)	1753
Psp5II	RGGWCCY	2 cut(s)	1923, 2118
Psp6I	CCWGG	3 cut(s)	1222, 1473, 1726
PspGI	CCWGG	3 cut(s)	1222, 1473, 1726
PspN4I	GGNNCC	2 cut(s)	2120, 2474
PspPI	GGNCC	4 cut(s)	860, 959, 1923, 2118
PspPPI	RGGWCCY	2 cut(s)	1923, 2118
PstI	CTGCAG	3 cut(s)	300, 1834, 2295
PstNI	CAGNNNCTG	3 cut(s)	433, 1465, 1551
PsuI	RGATCY	2 cut(s)	1154, 1760
PsyI	GACNNNGTC	1 cut(s)	1840
PvuII	CAGCTG	2 cut(s)	608, 1602
SacI	GAGCTC	1 cut(s)	1753
SapI	GCTCTTC	2 cut(s)	188, 2085
SaqAI	TTAA	7 cut(s)	177, 567, 813, 993, 1349, 1424, 1658
Sau3AI	GATC	6 cut(s)	1154, 1203, 1760, 1825, 2172, 2534
Sau96I	GGNCC	4 cut(s)	860, 959, 1923, 2118
SchI	GAGTC	2 cut(s)	1394, 2237
ScrFI	CCNGG	5 cut(s)	957, 1224, 1475, 1728, 2497
SduI	GDGCHC	5 cut(s)	20, 1503, 1753, 2031, 2097
SexAI	ACCWGGT	1 cut(s)	1222
SfaNI	GCATC	4 cut(s)	682, 1328, 2019, 2554
SfcI	CTRYAG	6 cut(s)	296, 1098, 1527, 1614, 1830, 2291
SinI	GGWCC	3 cut(s)	860, 1923, 2118
SmlI	CTYRAG	3 cut(s)	1024, 1606, 2051
SmoI	CTYRAG	3 cut(s)	1024, 1606, 2051
SpeI	ACTAGT	2 cut(s)	398, 1796
SphI	GCATGC	2 cut(s)	973, 2323
SsiI	CCGC	1 cut(s)	2128
SspI	AATATT	2 cut(s)	991, 1060
SspMI	CTAG	8 cut(s)	390, 399, 678, 761, 1374, 1407, 1797, 2007
SstI	GAGCTC	1 cut(s)	1753
StyD4I	CCNGG	5 cut(s)	955, 1222, 1473, 1726, 2495
StyI	CCWWGG	5 cut(s)	845, 1373, 1639, 1813, 2387
TaqI	TCGA	7 cut(s)	75, 881, 1172, 2013, 2355, 2377, 2416
TatI	WGTACW	4 cut(s)	592, 645, 1880, 2047
TfiI	GAWTC	8 cut(s)	242, 317, 788, 920, 1295, 1673, 2000, 2443
Tru1I	TTAA	7 cut(s)	177, 567, 813, 993, 1349, 1424, 1658
Tru9I	TTAA	7 cut(s)	177, 567, 813, 993, 1349, 1424, 1658
TscAI	CASTG	8 cut(s)	295, 1140, 1313, 1333, 1435, 2137, 2199, 2374
TseFI	GTSAC	4 cut(s)	1131, 1971, 2369, 2490
Tsp45I	GTSAC	4 cut(s)	1131, 1971, 2369, 2490
TspGWI	ACGGA	2 cut(s)	236, 2478
TspRI	CASTG	8 cut(s)	295, 1140, 1313, 1333, 1435, 2137, 2199, 2374
Tth111I	GACNNNGTC	1 cut(s)	1840
Van91I	CCANNNNNTGG	1 cut(s)	205
VpaK11BI	GGWCC	3 cut(s)	860, 1923, 2118
VspI	ATTAAT	1 cut(s)	567
XagI	CCTNNNNNAGG	1 cut(s)	1227
XapI	RAATTY	7 cut(s)	150, 629, 709, 751, 1216, 1302, 1983
XbaI	TCTAGA	1 cut(s)	677
XceI	RCATGY	3 cut(s)	973, 1097, 2323
XmaJI	CCTAGG	1 cut(s)	1373
XmiI	GTMKAC	2 cut(s)	1809, 2361
XmnI	GAANNNNTTC	1 cut(s)	1216
XspI	CTAG	8 cut(s)	390, 399, 678, 761, 1374, 1407, 1797, 2007
Zsp2I	ATGCAT	1 cut(s)	697

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.