Belongs to the glycosyl hydrolase 28 family
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G23500 |
| fragaria_vesca | FvH4_5g03040 FvH4_5g03040 FvH4_5g03040 FvH4_5g03040 |
| malus_domestica | MD14G1110300.v1.1 |
| prunus_persica | Prupe.5G105400_v2.0.a1 Prupe.5G105400_v2.0.a1 Prupe.5G105400_v2.0.a1 |
| pyrus_communis | pycom07g00680 pycom14g10500 |
| rosa_chinensis | RchiOBHm_Chr7g0196791 |
| rosa_laevigata | RLG00000003990 |
| rosa_multiflora | Rmu_sc0001083.1_g000029 |
| rosa_roxburghii | Rroxscaffold_3G00258950 |
| rosa_rugosa | Rorug07G0036200 Rorug07G0036200 |
| rosa_samantha | Rh7AG160300 Rh7BG162400 Rh7CG168700 Rh7DG161600 |
| rosa_wichuraiana | Rw7G014010 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 614 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 524, 1173 |
| AccI | GTMKAC | 1 cut(s) | 1455 |
| AciI | CCGC | 1 cut(s) | 211 |
| AclI | AACGTT | 1 cut(s) | 1350 |
| AclWI | GGATC | 9 cut(s) | 848, 936, 1036, 1049, 1106, 1210, 1220, 1240, 1316 |
| AcoI | YGGCCR | 3 cut(s) | 186, 497, 1071 |
| AcsI | RAATTY | 4 cut(s) | 31, 650, 720, 1335 |
| AfaI | GTAC | 2 cut(s) | 245, 686 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 524, 1173, 1331 |
| AgsI | TTSAA | 7 cut(s) | 31, 424, 655, 794, 875, 1419, 1523 |
| AjnI | CCWGG | 3 cut(s) | 397, 1315, 1458 |
| AluBI | AGCT | 5 cut(s) | 385, 420, 967, 1298, 1303 |
| AluI | AGCT | 5 cut(s) | 385, 420, 967, 1298, 1303 |
| Alw21I | GWGCWC | 1 cut(s) | 1538 |
| Alw26I | GTCTC | 1 cut(s) | 895 |
| AlwI | GGATC | 9 cut(s) | 848, 936, 1036, 1049, 1106, 1210, 1220, 1240, 1316 |
| Ama87I | CYCGRG | 1 cut(s) | 219 |
| AoxI | GGCC | 6 cut(s) | 186, 216, 497, 1071, 1374, 1463 |
| ApeKI | GCWGC | 6 cut(s) | 338, 417, 777, 964, 1295, 1478 |
| ApoI | RAATTY | 4 cut(s) | 31, 650, 720, 1335 |
| AseI | ATTAAT | 1 cut(s) | 741 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 513 |
| AspLEI | GCGC | 1 cut(s) | 251 |
| AspS9I | GGNCC | 2 cut(s) | 217, 1463 |
| AsuC2I | CCSGG | 2 cut(s) | 220, 221 |
| AsuHPI | GGTGA | 8 cut(s) | 169, 314, 421, 433, 514, 644, 1165, 1331 |
| AvaI | CYCGRG | 1 cut(s) | 219 |
| AxyI | CCTNAGG | 1 cut(s) | 1434 |
| BaeGI | GKGCMC | 1 cut(s) | 382 |
| BalI | TGGCCA | 2 cut(s) | 188, 1073 |
| BamHI | GGATCC | 1 cut(s) | 1041 |
| BanI | GGYRCC | 1 cut(s) | 614 |
| BanII | GRGCYC | 1 cut(s) | 268 |
| BbsI | GAAGAC | 1 cut(s) | 882 |
| Bbv12I | GWGCWC | 1 cut(s) | 1538 |
| BbvI | GCAGC | 6 cut(s) | 325, 429, 789, 976, 1307, 1490 |
| BccI | CCATC | 9 cut(s) | 148, 154, 299, 350, 365, 526, 757, 771, 830 |
| BceAI | ACGGC | 1 cut(s) | 995 |
| BciT130I | CCWGG | 3 cut(s) | 399, 1317, 1460 |
| BclI | TGATCA | 1 cut(s) | 972 |
| BcnI | CCSGG | 2 cut(s) | 220, 221 |
| BcoDI | GTCTC | 1 cut(s) | 895 |
| BisI | GCNGC | 7 cut(s) | 211, 339, 418, 778, 965, 1296, 1479 |
| BlpI | GCTNAGC | 1 cut(s) | 1299 |
| BlsI | GCNGC | 7 cut(s) | 212, 340, 419, 779, 966, 1297, 1480 |
| BmcAI | AGTACT | 1 cut(s) | 245 |
| Bme1390I | CCNGG | 5 cut(s) | 220, 221, 399, 1317, 1460 |
| BmeT110I | CYCGRG | 1 cut(s) | 219 |
| BmgT120I | GGNCC | 2 cut(s) | 217, 1463 |
| BmiI | GGNNCC | 5 cut(s) | 577, 616, 1043, 1431, 1464 |
| BmrFI | CCNGG | 5 cut(s) | 220, 221, 399, 1317, 1460 |
| BmsI | GCATC | 2 cut(s) | 451, 942 |
| BpiI | GAAGAC | 1 cut(s) | 882 |
| BpmI | CTGGAG | 1 cut(s) | 1325 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 1299 |
| BpuMI | CCSGG | 2 cut(s) | 220, 221 |
| BsaBI | GATNNNNATC | 1 cut(s) | 695 |
| BsaJI | CCNNGG | 5 cut(s) | 219, 279, 324, 1388, 1459 |
| BsaWI | WCCGGW | 1 cut(s) | 1331 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 1113, 1143 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 524, 1173, 1331 |
| Bse118I | RCCGGY | 1 cut(s) | 499 |
| Bse1I | ACTGG | 3 cut(s) | 418, 815, 1368 |
| Bse21I | CCTNAGG | 1 cut(s) | 1434 |
| Bse3DI | GCAATG | 1 cut(s) | 787 |
| Bse8I | GATNNNNATC | 1 cut(s) | 695 |
| BseBI | CCWGG | 3 cut(s) | 399, 1317, 1460 |
| BseDI | CCNNGG | 5 cut(s) | 219, 279, 324, 1388, 1459 |
| BseGI | GGATG | 5 cut(s) | 58, 763, 904, 957, 1191 |
| BseJI | GATNNNNATC | 1 cut(s) | 695 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 524, 1173, 1331 |
| BseMI | GCAATG | 1 cut(s) | 787 |
| BseMII | CTCAG | 5 cut(s) | 141, 367, 494, 1269, 1448 |
| BseNI | ACTGG | 3 cut(s) | 418, 815, 1368 |
| BseRI | GAGGAG | 3 cut(s) | 309, 500, 1134 |
| BseSI | GKGCMC | 1 cut(s) | 382 |
| BseXI | GCAGC | 6 cut(s) | 325, 429, 789, 976, 1307, 1490 |
| BseYI | CCCAGC | 1 cut(s) | 1409 |
| Bsh1285I | CGRYCG | 1 cut(s) | 683 |
| BshFI | GGCC | 6 cut(s) | 188, 218, 499, 1073, 1376, 1465 |
| BshNI | GGYRCC | 1 cut(s) | 614 |
| BsiEI | CGRYCG | 1 cut(s) | 683 |
| BsiHKAI | GWGCWC | 1 cut(s) | 1538 |
| BsiHKCI | CYCGRG | 1 cut(s) | 219 |
| BsiSI | CCGG | 3 cut(s) | 220, 500, 1332 |
| BslFI | GGGAC | 2 cut(s) | 551, 620 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 524, 1173, 1331 |
| BsmAI | GTCTC | 1 cut(s) | 895 |
| BsmFI | GGGAC | 2 cut(s) | 551, 620 |
| BsnI | GGCC | 6 cut(s) | 188, 218, 499, 1073, 1376, 1465 |
| BsoBI | CYCGRG | 1 cut(s) | 219 |
| Bsp1286I | GDGCHC | 3 cut(s) | 268, 382, 1538 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 1299 |
| Bsp19I | CCATGG | 1 cut(s) | 1388 |
| BspACI | CCGC | 1 cut(s) | 211 |
| BspANI | GGCC | 6 cut(s) | 188, 218, 499, 1073, 1376, 1465 |
| BspCNI | CTCAG | 5 cut(s) | 142, 366, 493, 1270, 1447 |
| BspHI | TCATGA | 1 cut(s) | 1264 |
| BspLI | GGNNCC | 5 cut(s) | 577, 616, 1043, 1431, 1464 |
| BspPI | GGATC | 9 cut(s) | 848, 936, 1036, 1049, 1106, 1210, 1220, 1240, 1316 |
| BspQI | GCTCTTC | 1 cut(s) | 1242 |
| BspT107I | GGYRCC | 1 cut(s) | 614 |
| BsrDI | GCAATG | 1 cut(s) | 787 |
| BsrFI | RCCGGY | 1 cut(s) | 499 |
| BsrI | ACTGG | 3 cut(s) | 418, 815, 1368 |
| BssAI | RCCGGY | 1 cut(s) | 499 |
| BssECI | CCNNGG | 5 cut(s) | 219, 279, 324, 1388, 1459 |
| BssT1I | CCWWGG | 3 cut(s) | 279, 324, 1388 |
| Bst2UI | CCWGG | 3 cut(s) | 399, 1317, 1460 |
| Bst4CI | ACNGT | 4 cut(s) | 272, 548, 626, 684 |
| Bst6I | CTCTTC | 3 cut(s) | 1111, 1242, 1491 |
| BstC8I | GCNNGC | 3 cut(s) | 53, 82, 1505 |
| BstDEI | CTNAG | 7 cut(s) | 150, 353, 480, 960, 1278, 1299, 1434 |
| BstDSI | CCRYGG | 1 cut(s) | 1388 |
| BstF5I | GGATG | 5 cut(s) | 58, 763, 904, 957, 1191 |
| BstHHI | GCGC | 1 cut(s) | 251 |
| BstMAI | GTCTC | 1 cut(s) | 895 |
| BstMCI | CGRYCG | 1 cut(s) | 683 |
| BstMWI | GCNNNNNNNGC | 6 cut(s) | 272, 281, 335, 961, 1013, 1373 |
| BstNI | CCWGG | 3 cut(s) | 399, 1317, 1460 |
| BstNSI | RCATGY | 4 cut(s) | 990, 1211, 1443, 1485 |
| BstSCI | CCNGG | 5 cut(s) | 218, 219, 397, 1315, 1458 |
| BstSLI | GKGCMC | 1 cut(s) | 382 |
| BstV1I | GCAGC | 6 cut(s) | 325, 429, 789, 976, 1307, 1490 |
| BstV2I | GAAGAC | 1 cut(s) | 882 |
| BstX2I | RGATCY | 1 cut(s) | 1041 |
| BstYI | RGATCY | 1 cut(s) | 1041 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1434 |
| BsuRI | GGCC | 6 cut(s) | 188, 218, 499, 1073, 1376, 1465 |
| BtgI | CCRYGG | 1 cut(s) | 1388 |
| BtsCI | GGATG | 5 cut(s) | 58, 763, 904, 957, 1191 |
| BtsIMutI | CAGTG | 6 cut(s) | 277, 585, 822, 1009, 1361, 1398 |
| Cac8I | GCNNGC | 3 cut(s) | 53, 82, 1505 |
| CciI | TCATGA | 1 cut(s) | 1264 |
| CfoI | GCGC | 1 cut(s) | 251 |
| Cfr10I | RCCGGY | 1 cut(s) | 499 |
| Cfr13I | GGNCC | 2 cut(s) | 217, 1463 |
| Cfr9I | CCCGGG | 1 cut(s) | 219 |
| CsiI | ACCWGGT | 1 cut(s) | 1315 |
| Csp6I | GTAC | 2 cut(s) | 244, 685 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 1407, 1442 |
| CviQI | GTAC | 2 cut(s) | 244, 685 |
| DdeI | CTNAG | 7 cut(s) | 150, 353, 480, 960, 1278, 1299, 1434 |
| EaeI | YGGCCR | 3 cut(s) | 186, 497, 1071 |
| Eam1104I | CTCTTC | 3 cut(s) | 1111, 1242, 1491 |
| EarI | CTCTTC | 3 cut(s) | 1111, 1242, 1491 |
| Eco130I | CCWWGG | 3 cut(s) | 279, 324, 1388 |
| Eco24I | GRGCYC | 1 cut(s) | 268 |
| Eco81I | CCTNAGG | 1 cut(s) | 1434 |
| Eco88I | CYCGRG | 1 cut(s) | 219 |
| EcoRII | CCWGG | 3 cut(s) | 397, 1315, 1458 |
| EcoT14I | CCWWGG | 3 cut(s) | 279, 324, 1388 |
| EcoT22I | ATGCAT | 1 cut(s) | 992 |
| EcoT38I | GRGCYC | 1 cut(s) | 268 |
| ErhI | CCWWGG | 3 cut(s) | 279, 324, 1388 |
| FaqI | GGGAC | 2 cut(s) | 551, 620 |
| FbaI | TGATCA | 1 cut(s) | 972 |
| FblI | GTMKAC | 1 cut(s) | 1455 |
| Fnu4HI | GCNGC | 7 cut(s) | 211, 339, 418, 778, 965, 1296, 1479 |
| FokI | GGATG | 5 cut(s) | 45, 750, 911, 964, 1198 |
| FriOI | GRGCYC | 1 cut(s) | 268 |
| Fsp4HI | GCNGC | 7 cut(s) | 211, 339, 418, 778, 965, 1296, 1479 |
| GlaI | GCGC | 1 cut(s) | 250 |
| GluI | GCNGC | 7 cut(s) | 211, 339, 418, 778, 965, 1296, 1479 |
| GsaI | CCCAGC | 1 cut(s) | 1413 |
| GsuI | CTGGAG | 1 cut(s) | 1325 |
| HaeIII | GGCC | 6 cut(s) | 188, 218, 499, 1073, 1376, 1465 |
| HapII | CCGG | 3 cut(s) | 220, 500, 1332 |
| HhaI | GCGC | 1 cut(s) | 251 |
| Hin6I | GCGC | 1 cut(s) | 249 |
| HinP1I | GCGC | 1 cut(s) | 249 |
| HincII | GTYRAC | 1 cut(s) | 411 |
| HindII | GTYRAC | 1 cut(s) | 411 |
| HinfI | GANTC | 4 cut(s) | 555, 851, 1079, 1085 |
| HpaI | GTTAAC | 1 cut(s) | 411 |
| HpaII | CCGG | 3 cut(s) | 220, 500, 1332 |
| HphI | GGTGA | 8 cut(s) | 169, 314, 421, 433, 514, 644, 1165, 1331 |
| Hpy166II | GTNNAC | 3 cut(s) | 411, 772, 1456 |
| Hpy188I | TCNGA | 6 cut(s) | 151, 370, 567, 709, 977, 1084 |
| Hpy188III | TCNNGA | 7 cut(s) | 62, 482, 655, 1089, 1249, 1265, 1493 |
| Hpy8I | GTNNAC | 3 cut(s) | 411, 772, 1456 |
| HpyAV | CCTTC | 2 cut(s) | 652, 1366 |
| HpyCH4III | ACNGT | 4 cut(s) | 272, 548, 626, 684 |
| HpyCH4IV | ACGT | 3 cut(s) | 591, 759, 1350 |
| HpyF10VI | GCNNNNNNNGC | 6 cut(s) | 272, 281, 335, 961, 1013, 1373 |
| HpyF3I | CTNAG | 7 cut(s) | 150, 353, 480, 960, 1278, 1299, 1434 |
| HpySE526I | ACGT | 3 cut(s) | 591, 759, 1350 |
| HspAI | GCGC | 1 cut(s) | 249 |
| Ksp22I | TGATCA | 1 cut(s) | 972 |
| KspAI | GTTAAC | 1 cut(s) | 411 |
| LguI | GCTCTTC | 1 cut(s) | 1242 |
| Lsp1109I | GCAGC | 6 cut(s) | 325, 429, 789, 976, 1307, 1490 |
| LweI | GCATC | 2 cut(s) | 451, 942 |
| MabI | ACCWGGT | 1 cut(s) | 1315 |
| MaeII | ACGT | 3 cut(s) | 591, 759, 1350 |
| MaeIII | GTNAC | 5 cut(s) | 598, 817, 1153, 1285, 1351 |
| MboII | GAAGA | 6 cut(s) | 236, 461, 887, 1128, 1229, 1508 |
| MfeI | CAATTG | 1 cut(s) | 1509 |
| MflI | RGATCY | 1 cut(s) | 1041 |
| MhlI | GDGCHC | 3 cut(s) | 268, 382, 1538 |
| MlsI | TGGCCA | 2 cut(s) | 188, 1073 |
| MluNI | TGGCCA | 2 cut(s) | 188, 1073 |
| Mox20I | TGGCCA | 2 cut(s) | 188, 1073 |
| Mph1103I | ATGCAT | 1 cut(s) | 992 |
| MroXI | GAANNNNTTC | 1 cut(s) | 513 |
| MscI | TGGCCA | 2 cut(s) | 188, 1073 |
| MseI | TTAA | 4 cut(s) | 204, 410, 668, 741 |
| MslI | CAYNNNNRTG | 2 cut(s) | 459, 1142 |
| Msp20I | TGGCCA | 2 cut(s) | 188, 1073 |
| MspI | CCGG | 3 cut(s) | 220, 500, 1332 |
| MspR9I | CCNGG | 5 cut(s) | 220, 221, 399, 1317, 1460 |
| MunI | CAATTG | 1 cut(s) | 1509 |
| MvaI | CCWGG | 3 cut(s) | 399, 1317, 1460 |
| MwoI | GCNNNNNNNGC | 6 cut(s) | 272, 281, 335, 961, 1013, 1373 |
| NciI | CCSGG | 2 cut(s) | 220, 221 |
| NcoI | CCATGG | 1 cut(s) | 1388 |
| NlaIV | GGNNCC | 5 cut(s) | 577, 616, 1043, 1431, 1464 |
| NmuCI | GTSAC | 2 cut(s) | 817, 1153 |
| NsiI | ATGCAT | 1 cut(s) | 992 |
| NspI | RCATGY | 4 cut(s) | 990, 1211, 1443, 1485 |
| PagI | TCATGA | 1 cut(s) | 1264 |
| PciSI | GCTCTTC | 1 cut(s) | 1242 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1352 |
| PdmI | GAANNNNTTC | 1 cut(s) | 513 |
| PfeI | GAWTC | 4 cut(s) | 555, 851, 1079, 1085 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 524, 1173 |
| PkrI | GCNGC | 7 cut(s) | 212, 340, 419, 779, 966, 1297, 1480 |
| PshBI | ATTAAT | 1 cut(s) | 741 |
| Psp1406I | AACGTT | 1 cut(s) | 1350 |
| Psp6I | CCWGG | 3 cut(s) | 397, 1315, 1458 |
| PspFI | CCCAGC | 1 cut(s) | 1409 |
| PspGI | CCWGG | 3 cut(s) | 397, 1315, 1458 |
| PspN4I | GGNNCC | 5 cut(s) | 577, 616, 1043, 1431, 1464 |
| PspPI | GGNCC | 2 cut(s) | 217, 1463 |
| PsuI | RGATCY | 1 cut(s) | 1041 |
| RsaI | GTAC | 2 cut(s) | 245, 686 |
| RsaNI | GTAC | 2 cut(s) | 244, 685 |
| RseI | CAYNNNNRTG | 2 cut(s) | 459, 1142 |
| SapI | GCTCTTC | 1 cut(s) | 1242 |
| SaqAI | TTAA | 4 cut(s) | 204, 410, 668, 741 |
| SatI | GCNGC | 7 cut(s) | 211, 339, 418, 778, 965, 1296, 1479 |
| Sau96I | GGNCC | 2 cut(s) | 217, 1463 |
| ScaI | AGTACT | 1 cut(s) | 245 |
| ScrFI | CCNGG | 5 cut(s) | 220, 221, 399, 1317, 1460 |
| SduI | GDGCHC | 3 cut(s) | 268, 382, 1538 |
| SexAI | ACCWGGT | 1 cut(s) | 1315 |
| SfaNI | GCATC | 2 cut(s) | 451, 942 |
| SmaI | CCCGGG | 1 cut(s) | 221 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 459, 1142 |
| SsiI | CCGC | 1 cut(s) | 211 |
| SspI | AATATT | 1 cut(s) | 1066 |
| StyD4I | CCNGG | 5 cut(s) | 218, 219, 397, 1315, 1458 |
| StyI | CCWWGG | 3 cut(s) | 279, 324, 1388 |
| TaaI | ACNGT | 4 cut(s) | 272, 548, 626, 684 |
| TaiI | ACGT | 3 cut(s) | 594, 762, 1353 |
| TaqI | TCGA | 4 cut(s) | 507, 529, 693, 1346 |
| TatI | WGTACW | 1 cut(s) | 243 |
| TauI | GCSGC | 1 cut(s) | 213 |
| TfiI | GAWTC | 4 cut(s) | 555, 851, 1079, 1085 |
| Tru1I | TTAA | 4 cut(s) | 204, 410, 668, 741 |
| Tru9I | TTAA | 4 cut(s) | 204, 410, 668, 741 |
| TscAI | CASTG | 6 cut(s) | 277, 592, 822, 1009, 1368, 1405 |
| TseFI | GTSAC | 2 cut(s) | 817, 1153 |
| TseI | GCWGC | 6 cut(s) | 338, 417, 777, 964, 1295, 1478 |
| Tsp45I | GTSAC | 2 cut(s) | 817, 1153 |
| TspDTI | ATGAA | 5 cut(s) | 17, 47, 547, 1175, 1184 |
| TspGWI | ACGGA | 1 cut(s) | 557 |
| TspMI | CCCGGG | 1 cut(s) | 219 |
| TspRI | CASTG | 6 cut(s) | 277, 592, 822, 1009, 1368, 1405 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 524, 1173 |
| VspI | ATTAAT | 1 cut(s) | 741 |
| XapI | RAATTY | 4 cut(s) | 31, 650, 720, 1335 |
| XceI | RCATGY | 4 cut(s) | 990, 1211, 1443, 1485 |
| XmaI | CCCGGG | 1 cut(s) | 219 |
| XmiI | GTMKAC | 1 cut(s) | 1455 |
| XmnI | GAANNNNTTC | 1 cut(s) | 513 |
| ZrmI | AGTACT | 1 cut(s) | 245 |
| Zsp2I | ATGCAT | 1 cut(s) | 992 |