Prupe.5G119400_v2.0.a1

Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp05
Physical Location & Seq
Reverse (-)
11987318 .. 11987683
366 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.5G119400.1

Sequence Viewer

Length: 366 bp
ATGATGCATCCGATCACAAAGATCATAGCCGTTGTGATCATCTCAATGGTTTCTGGGGCTGCCATGGGTGCTGATCCTCAATCTCCCTACTGCGACATCATCCTCGACCACTTCACCCCTTGCCTTCCCTACATACTTCAAGGTGAGGTGAATCCAGCCAAGGTTTGCTGTGATGGTGTCCTGGGCCTCACACAGTATACAAACGCCAAGGGAGGCCAACAAGATATATGTGACTGCGTGAAGGCTGCAGCAATTTTGATGGGGGCACCTGTTGATAATTTCTCTAAGATTTCTTCTCTTCCCAAAACTTGTGGCCTATCGGTCACACTTCCACCCATCTCTAGCGGCACCGATTGTTCCCAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

122

Amino Acids

12.59

Weight (kDa)

4.95

Isoelectric Point (pI)

41.09

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0015621)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 265, 347
AccI GTMKAC 1 cut(s) 197
AciI CCGC 1 cut(s) 345
AclWI GGATC 1 cut(s) 68
AgsI TTSAA 1 cut(s) 140
AjnI CCWGG 1 cut(s) 180
AlwI GGATC 1 cut(s) 68
AoxI GGCC 3 cut(s) 184, 214, 313
ApeKI GCWGC 3 cut(s) 59, 245, 248
AspS9I GGNCC 1 cut(s) 184
AsuHPI GGTGA 3 cut(s) 106, 155, 160
BaeGI GKGCMC 1 cut(s) 268
BanI GGYRCC 2 cut(s) 265, 347
BbvI GCAGC 3 cut(s) 46, 232, 260
BccI CCATC 3 cut(s) 167, 253, 344
BceAI ACGGC 1 cut(s) 14
BciT130I CCWGG 1 cut(s) 182
BclI TGATCA 1 cut(s) 36
BfaI CTAG 1 cut(s) 342
BfmI CTRYAG 1 cut(s) 246
BisI GCNGC 4 cut(s) 60, 246, 249, 346
BlsI GCNGC 4 cut(s) 61, 247, 250, 347
Bme1390I CCNGG 1 cut(s) 182
BmgT120I GGNCC 1 cut(s) 184
BmiI GGNNCC 2 cut(s) 267, 349
BmrFI CCNGG 1 cut(s) 182
BmrI ACTGGG 1 cut(s) 355
BmsI GCATC 1 cut(s) 16
BmuI ACTGGG 1 cut(s) 355
BsaJI CCNNGG 4 cut(s) 63, 159, 181, 207
Bse1I ACTGG 1 cut(s) 361
BseBI CCWGG 1 cut(s) 182
BseDI CCNNGG 4 cut(s) 63, 159, 181, 207
BseGI GGATG 2 cut(s) 7, 99
BseNI ACTGG 1 cut(s) 361
BseSI GKGCMC 1 cut(s) 268
BseXI GCAGC 3 cut(s) 46, 232, 260
BshFI GGCC 3 cut(s) 186, 216, 315
BshNI GGYRCC 2 cut(s) 265, 347
BsnI GGCC 3 cut(s) 186, 216, 315
Bsp1286I GDGCHC 1 cut(s) 268
Bsp143I GATC 4 cut(s) 12, 21, 36, 73
Bsp19I CCATGG 1 cut(s) 63
BspACI CCGC 1 cut(s) 345
BspANI GGCC 3 cut(s) 186, 216, 315
BspLI GGNNCC 2 cut(s) 267, 349
BspMAI CTGCAG 1 cut(s) 250
BspPI GGATC 1 cut(s) 68
BspT107I GGYRCC 2 cut(s) 265, 347
BsrI ACTGG 1 cut(s) 361
BssECI CCNNGG 4 cut(s) 63, 159, 181, 207
BssMI GATC 4 cut(s) 12, 21, 36, 73
BssNAI GTATAC 1 cut(s) 198
BssT1I CCWWGG 3 cut(s) 63, 159, 207
Bst1107I GTATAC 1 cut(s) 198
Bst2UI CCWGG 1 cut(s) 182
Bst4CI ACNGT 1 cut(s) 195
Bst6I CTCTTC 1 cut(s) 303
BstDEI CTNAG 1 cut(s) 285
BstDSI CCRYGG 1 cut(s) 63
BstF5I GGATG 2 cut(s) 7, 99
BstKTI GATC 4 cut(s) 15, 24, 39, 76
BstMBI GATC 4 cut(s) 12, 21, 36, 73
BstMWI GCNNNNNNNGC 1 cut(s) 68
BstNI CCWGG 1 cut(s) 182
BstSCI CCNGG 1 cut(s) 180
BstSFI CTRYAG 1 cut(s) 246
BstSLI GKGCMC 1 cut(s) 268
BstV1I GCAGC 3 cut(s) 46, 232, 260
BstZ17I GTATAC 1 cut(s) 198
BsuRI GGCC 3 cut(s) 186, 216, 315
BtgI CCRYGG 1 cut(s) 63
BtsCI GGATG 2 cut(s) 7, 99
Cfr13I GGNCC 1 cut(s) 184
CspCI CAANNNNNGTGG 2 cut(s) 292, 327
CviAII CATG 1 cut(s) 64
CviJI RGCY 7 cut(s) 29, 59, 158, 186, 216, 245, 315
CviKI_1 RGCY 7 cut(s) 29, 59, 158, 186, 216, 245, 315
DdeI CTNAG 1 cut(s) 285
DpnI GATC 4 cut(s) 14, 23, 38, 75
DpnII GATC 4 cut(s) 12, 21, 36, 73
Eam1104I CTCTTC 1 cut(s) 303
EarI CTCTTC 1 cut(s) 303
Eco130I CCWWGG 3 cut(s) 63, 159, 207
EcoRII CCWGG 1 cut(s) 180
EcoT14I CCWWGG 3 cut(s) 63, 159, 207
EcoT22I ATGCAT 1 cut(s) 9
ErhI CCWWGG 3 cut(s) 63, 159, 207
FaeI CATG 1 cut(s) 67
FaiI YATR 6 cut(s) 26, 65, 134, 198, 227, 229
FatI CATG 1 cut(s) 63
FbaI TGATCA 1 cut(s) 36
FblI GTMKAC 1 cut(s) 197
Fnu4HI GCNGC 4 cut(s) 60, 246, 249, 346
FokI GGATG 1 cut(s) 86
Fsp4HI GCNGC 4 cut(s) 60, 246, 249, 346
FspBI CTAG 1 cut(s) 342
GluI GCNGC 4 cut(s) 60, 246, 249, 346
HaeIII GGCC 3 cut(s) 186, 216, 315
Hin1II CATG 1 cut(s) 67
HinfI GANTC 1 cut(s) 151
HphI GGTGA 3 cut(s) 106, 155, 160
Hpy166II GTNNAC 1 cut(s) 198
Hpy188I TCNGA 1 cut(s) 12
Hpy8I GTNNAC 1 cut(s) 198
HpyAV CCTTC 2 cut(s) 134, 235
HpyCH4III ACNGT 1 cut(s) 195
HpyCH4V TGCA 2 cut(s) 7, 248
HpyF10VI GCNNNNNNNGC 1 cut(s) 68
HpyF3I CTNAG 1 cut(s) 285
Hsp92II CATG 1 cut(s) 67
Ksp22I TGATCA 1 cut(s) 36
Kzo9I GATC 4 cut(s) 12, 21, 36, 73
LpnPI CCDG 5 cut(s) 39, 167, 168, 194, 282
Lsp1109I GCAGC 3 cut(s) 46, 232, 260
LweI GCATC 1 cut(s) 16
MaeI CTAG 1 cut(s) 342
MaeIII GTNAC 2 cut(s) 230, 322
MalI GATC 4 cut(s) 14, 23, 38, 75
MboI GATC 4 cut(s) 12, 21, 36, 73
MboII GAAGA 2 cut(s) 285, 290
MhlI GDGCHC 1 cut(s) 268
MluCI AATT 2 cut(s) 252, 277
MnlI CCTC 5 cut(s) 87, 113, 139, 197, 206
Mph1103I ATGCAT 1 cut(s) 9
MslI CAYNNNNRTG 1 cut(s) 44
MspR9I CCNGG 1 cut(s) 182
MvaI CCWGG 1 cut(s) 182
MwoI GCNNNNNNNGC 1 cut(s) 68
NcoI CCATGG 1 cut(s) 63
NdeII GATC 4 cut(s) 12, 21, 36, 73
NlaIII CATG 1 cut(s) 67
NlaIV GGNNCC 2 cut(s) 267, 349
NmuCI GTSAC 2 cut(s) 230, 322
NsiI ATGCAT 1 cut(s) 9
PfeI GAWTC 1 cut(s) 151
PkrI GCNGC 4 cut(s) 61, 247, 250, 347
Psp6I CCWGG 1 cut(s) 180
PspGI CCWGG 1 cut(s) 180
PspN4I GGNNCC 2 cut(s) 267, 349
PspPI GGNCC 1 cut(s) 184
PstI CTGCAG 1 cut(s) 250
RseI CAYNNNNRTG 1 cut(s) 44
SatI GCNGC 4 cut(s) 60, 246, 249, 346
Sau3AI GATC 4 cut(s) 12, 21, 36, 73
Sau96I GGNCC 1 cut(s) 184
ScrFI CCNGG 1 cut(s) 182
SduI GDGCHC 1 cut(s) 268
SetI ASST 4 cut(s) 145, 150, 165, 271
SfaNI GCATC 1 cut(s) 16
SfcI CTRYAG 1 cut(s) 246
SmiMI CAYNNNNRTG 1 cut(s) 44
Sse9I AATT 2 cut(s) 252, 277
SsiI CCGC 1 cut(s) 345
SspMI CTAG 1 cut(s) 342
StyD4I CCNGG 1 cut(s) 180
StyI CCWWGG 3 cut(s) 63, 159, 207
TaaI ACNGT 1 cut(s) 195
TaqI TCGA 1 cut(s) 105
TaqII GACCGA 1 cut(s) 310
TasI AATT 2 cut(s) 252, 277
TauI GCSGC 1 cut(s) 348
TfiI GAWTC 1 cut(s) 151
TseFI GTSAC 2 cut(s) 230, 322
TseI GCWGC 3 cut(s) 59, 245, 248
Tsp45I GTSAC 2 cut(s) 230, 322
XmiI GTMKAC 1 cut(s) 197
XspI CTAG 1 cut(s) 342
Zsp2I ATGCAT 1 cut(s) 9
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.