Plastocyanin-like domain
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G64640 |
| fragaria_vesca | FvH4_5g11040 |
| malus_domestica | MD06G1117200.v1.1 MD14G1124500.v1.1 |
| prunus_persica | Prupe.5G128300_v2.0.a1 |
| pyrus_communis | pycom06g10910 pycom14g11030 |
| rosa_chinensis | RchiOBHm_Chr7g0186761 |
| rosa_laevigata | RLG00000004818 |
| rosa_multiflora | Rmu_co8398473.1_g000001 Rmu_sc0009734.1_g000003 Rmu_ssc0000024.1_g000047 |
| rosa_roxburghii | Rroxscaffold_3G00267850 |
| rosa_rugosa | Rorug06G0476400 |
| rosa_samantha | Rh7AG064100 Rh7BG080600 Rh7CG083400 Rh7DG084300 |
| rosa_wichuraiana | Rw7G007230 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccI | GTMKAC | 1 cut(s) | 144 |
| AciI | CCGC | 1 cut(s) | 342 |
| AclWI | GGATC | 1 cut(s) | 263 |
| AcsI | RAATTY | 1 cut(s) | 170 |
| AfaI | GTAC | 3 cut(s) | 89, 203, 281 |
| AfiI | CCNNNNNNNGG | 1 cut(s) | 419 |
| AgsI | TTSAA | 4 cut(s) | 129, 175, 230, 307 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 202, 234 |
| AluBI | AGCT | 3 cut(s) | 31, 255, 376 |
| AluI | AGCT | 3 cut(s) | 31, 255, 376 |
| AlwI | GGATC | 1 cut(s) | 263 |
| AoxI | GGCC | 1 cut(s) | 421 |
| ApeKI | GCWGC | 1 cut(s) | 255 |
| ApoI | RAATTY | 1 cut(s) | 170 |
| AspS9I | GGNCC | 1 cut(s) | 422 |
| AsuC2I | CCSGG | 1 cut(s) | 351 |
| AsuHPI | GGTGA | 2 cut(s) | 328, 356 |
| BbvI | GCAGC | 1 cut(s) | 242 |
| BccI | CCATC | 2 cut(s) | 172, 508 |
| BcnI | CCSGG | 1 cut(s) | 351 |
| BfaI | CTAG | 2 cut(s) | 104, 426 |
| BglII | AGATCT | 1 cut(s) | 100 |
| BisI | GCNGC | 1 cut(s) | 256 |
| BlsI | GCNGC | 1 cut(s) | 257 |
| Bme1390I | CCNGG | 1 cut(s) | 351 |
| BmgT120I | GGNCC | 1 cut(s) | 422 |
| BmrFI | CCNGG | 1 cut(s) | 351 |
| BmrI | ACTGGG | 1 cut(s) | 509 |
| BmsI | GCATC | 1 cut(s) | 97 |
| BmuI | ACTGGG | 1 cut(s) | 509 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 174, 206 |
| BpuMI | CCSGG | 1 cut(s) | 351 |
| BsaJI | CCNNGG | 1 cut(s) | 20 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 398, 428 |
| Bsc4I | CCNNNNNNNGG | 1 cut(s) | 419 |
| Bse1I | ACTGG | 3 cut(s) | 42, 85, 515 |
| Bse3DI | GCAATG | 2 cut(s) | 400, 431 |
| BseDI | CCNNGG | 1 cut(s) | 20 |
| BseLI | CCNNNNNNNGG | 1 cut(s) | 419 |
| BseMI | GCAATG | 2 cut(s) | 400, 431 |
| BseMII | CTCAG | 1 cut(s) | 574 |
| BseNI | ACTGG | 3 cut(s) | 42, 85, 515 |
| BseXI | GCAGC | 1 cut(s) | 242 |
| BseYI | CCCAGC | 1 cut(s) | 478 |
| BsgI | GTGCAG | 2 cut(s) | 429, 480 |
| BshFI | GGCC | 1 cut(s) | 423 |
| BsiSI | CCGG | 1 cut(s) | 350 |
| BslFI | GGGAC | 1 cut(s) | 338 |
| BslI | CCNNNNNNNGG | 1 cut(s) | 419 |
| BsmFI | GGGAC | 1 cut(s) | 338 |
| BsnI | GGCC | 1 cut(s) | 423 |
| Bsp1407I | TGTACA | 1 cut(s) | 279 |
| Bsp143I | GATC | 2 cut(s) | 100, 268 |
| BspACI | CCGC | 1 cut(s) | 342 |
| BspANI | GGCC | 1 cut(s) | 423 |
| BspCNI | CTCAG | 1 cut(s) | 573 |
| BspPI | GGATC | 1 cut(s) | 263 |
| BsrDI | GCAATG | 2 cut(s) | 400, 431 |
| BsrGI | TGTACA | 1 cut(s) | 279 |
| BsrI | ACTGG | 3 cut(s) | 42, 85, 515 |
| BssECI | CCNNGG | 1 cut(s) | 20 |
| BssMI | GATC | 2 cut(s) | 100, 268 |
| BssT1I | CCWWGG | 1 cut(s) | 20 |
| Bst4CI | ACNGT | 1 cut(s) | 463 |
| BstAUI | TGTACA | 1 cut(s) | 279 |
| BstDEI | CTNAG | 2 cut(s) | 11, 560 |
| BstKTI | GATC | 2 cut(s) | 103, 271 |
| BstMBI | GATC | 2 cut(s) | 100, 268 |
| BstSCI | CCNGG | 1 cut(s) | 349 |
| BstV1I | GCAGC | 1 cut(s) | 242 |
| BstX2I | RGATCY | 2 cut(s) | 100, 268 |
| BstYI | RGATCY | 2 cut(s) | 100, 268 |
| BsuRI | GGCC | 1 cut(s) | 423 |
| BtsI | GCAGTG | 1 cut(s) | 554 |
| BtsIMutI | CAGTG | 3 cut(s) | 228, 554, 568 |
| Cfr13I | GGNCC | 1 cut(s) | 422 |
| Csp6I | GTAC | 3 cut(s) | 88, 202, 280 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 448, 483 |
| CviAII | CATG | 3 cut(s) | 167, 283, 523 |
| CviJI | RGCY | 8 cut(s) | 31, 213, 245, 255, 376, 399, 423, 530 |
| CviKI_1 | RGCY | 8 cut(s) | 31, 213, 245, 255, 376, 399, 423, 530 |
| CviQI | GTAC | 3 cut(s) | 88, 202, 280 |
| DdeI | CTNAG | 2 cut(s) | 11, 560 |
| DpnI | GATC | 2 cut(s) | 102, 270 |
| DpnII | GATC | 2 cut(s) | 100, 268 |
| Eco130I | CCWWGG | 1 cut(s) | 20 |
| EcoRI | GAATTC | 1 cut(s) | 170 |
| EcoT14I | CCWWGG | 1 cut(s) | 20 |
| ErhI | CCWWGG | 1 cut(s) | 20 |
| FaeI | CATG | 3 cut(s) | 170, 286, 526 |
| FaiI | YATR | 8 cut(s) | 56, 119, 168, 284, 381, 420, 524, 550 |
| FaqI | GGGAC | 1 cut(s) | 338 |
| FatI | CATG | 3 cut(s) | 166, 282, 522 |
| FblI | GTMKAC | 1 cut(s) | 144 |
| Fnu4HI | GCNGC | 1 cut(s) | 256 |
| Fsp4HI | GCNGC | 1 cut(s) | 256 |
| FspBI | CTAG | 2 cut(s) | 104, 426 |
| GluI | GCNGC | 1 cut(s) | 256 |
| GsaI | CCCAGC | 1 cut(s) | 482 |
| HaeIII | GGCC | 1 cut(s) | 423 |
| HapII | CCGG | 1 cut(s) | 350 |
| Hin1II | CATG | 3 cut(s) | 170, 286, 526 |
| HinfI | GANTC | 3 cut(s) | 185, 218, 440 |
| HpaII | CCGG | 1 cut(s) | 350 |
| HphI | GGTGA | 2 cut(s) | 328, 356 |
| Hpy166II | GTNNAC | 3 cut(s) | 145, 347, 554 |
| Hpy188III | TCNNGA | 2 cut(s) | 104, 175 |
| Hpy8I | GTNNAC | 3 cut(s) | 145, 347, 554 |
| HpyAV | CCTTC | 2 cut(s) | 459, 498 |
| HpyCH4III | ACNGT | 1 cut(s) | 463 |
| HpyCH4V | TGCA | 5 cut(s) | 46, 258, 431, 446, 497 |
| HpyF3I | CTNAG | 2 cut(s) | 11, 560 |
| Hsp92II | CATG | 3 cut(s) | 170, 286, 526 |
| Kzo9I | GATC | 2 cut(s) | 100, 268 |
| LmnI | GCTCC | 1 cut(s) | 381 |
| Lsp1109I | GCAGC | 1 cut(s) | 242 |
| LweI | GCATC | 1 cut(s) | 97 |
| MaeI | CTAG | 2 cut(s) | 104, 426 |
| MaeIII | GTNAC | 1 cut(s) | 232 |
| MalI | GATC | 2 cut(s) | 102, 270 |
| MboI | GATC | 2 cut(s) | 100, 268 |
| MboII | GAAGA | 1 cut(s) | 483 |
| MflI | RGATCY | 2 cut(s) | 100, 268 |
| MluCI | AATT | 2 cut(s) | 170, 307 |
| MmeI | TCCRAC | 1 cut(s) | 76 |
| MnlI | CCTC | 2 cut(s) | 272, 424 |
| MspA1I | CMGCKG | 2 cut(s) | 255, 342 |
| MspI | CCGG | 1 cut(s) | 350 |
| MspR9I | CCNGG | 1 cut(s) | 351 |
| NciI | CCSGG | 1 cut(s) | 351 |
| NdeII | GATC | 2 cut(s) | 100, 268 |
| NlaIII | CATG | 3 cut(s) | 170, 286, 526 |
| NmuCI | GTSAC | 1 cut(s) | 232 |
| PfeI | GAWTC | 3 cut(s) | 185, 218, 440 |
| PkrI | GCNGC | 1 cut(s) | 257 |
| PspFI | CCCAGC | 1 cut(s) | 478 |
| PspPI | GGNCC | 1 cut(s) | 422 |
| PsuI | RGATCY | 2 cut(s) | 100, 268 |
| PvuII | CAGCTG | 1 cut(s) | 255 |
| RsaI | GTAC | 3 cut(s) | 89, 203, 281 |
| RsaNI | GTAC | 3 cut(s) | 88, 202, 280 |
| SatI | GCNGC | 1 cut(s) | 256 |
| Sau3AI | GATC | 2 cut(s) | 100, 268 |
| Sau96I | GGNCC | 1 cut(s) | 422 |
| ScrFI | CCNGG | 1 cut(s) | 351 |
| SetI | ASST | 6 cut(s) | 26, 33, 257, 264, 378, 451 |
| SfaNI | GCATC | 1 cut(s) | 97 |
| Sse9I | AATT | 2 cut(s) | 170, 307 |
| SsiI | CCGC | 1 cut(s) | 342 |
| SspMI | CTAG | 2 cut(s) | 104, 426 |
| StyD4I | CCNGG | 1 cut(s) | 349 |
| StyI | CCWWGG | 1 cut(s) | 20 |
| TaaI | ACNGT | 1 cut(s) | 463 |
| TasI | AATT | 2 cut(s) | 170, 307 |
| TatI | WGTACW | 2 cut(s) | 87, 279 |
| TfiI | GAWTC | 3 cut(s) | 185, 218, 440 |
| TscAI | CASTG | 3 cut(s) | 228, 561, 568 |
| TseFI | GTSAC | 1 cut(s) | 232 |
| TseI | GCWGC | 1 cut(s) | 255 |
| Tsp45I | GTSAC | 1 cut(s) | 232 |
| TspDTI | ATGAA | 3 cut(s) | 183, 299, 306 |
| TspRI | CASTG | 3 cut(s) | 228, 561, 568 |
| XapI | RAATTY | 1 cut(s) | 170 |
| XbaI | TCTAGA | 1 cut(s) | 103 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 92, 386 |
| XmiI | GTMKAC | 1 cut(s) | 144 |
| XspI | CTAG | 2 cut(s) | 104, 426 |